Spg021361 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021361
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Mediator of RNA polymerase II transcription subunit 10
Location	scaffold6: 47728685 .. 47734274 (+)
RNA-Seq Expression	Spg021361
Synteny	Spg021361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAATGCTCGTCAGCGTTAAAGCCCCAATTAGACCCTTCAAATAATTTCTCCGTCTCGAAAGTCGAAACTCTTTAGATTCAAAGTTTCAGGCTTTCACCATTAATATTCATCGCGCTCGCAGCCCTAGTCCCATCGATCTCCTCCTCACTCCTTCGAACAAGTAAGATTGAAGTACTATGTTCTCTTGATTTTCAATTCTTTGATTCTCTCGCCTTCTTGTAGTCCGGTTTTTGATCGATGCTGGGAATTGTTGCTCTTCGGTCCATGATTTCTGCAATTCTAATTTGTGGGGGTCGTTTTTATTTGCCTTTGATTTCGGGGAAGCTGTTTGTTTGACTCAACTATTTGGTTTATCGCGATTGATTTTCTTTTTTATTTTTGTTTGATTATCATTCATTTTGGGATATTCAAGTTCGAGCTTGTTATGATTTTTGCTGTGATTTGTGGGACTTTCATACCAGTCGGAGGACTTGTTTTTTTTAGGGTTCGCATACTTCGACTTTCTCAGTGGCCCTCTGCGGGTCTGAAGATAGTAATATCATGATAAACGTATTTGCAACTGCCCTCCAAATGGGGAAATCTTCAGTAGATCTAAAATTTTGATATGTTTTTAGAGAAAAGCAAGACAGAAGGCTGATATAGTAATATTGCGAAAATTTGAAATGAACTTGTGTCAGTTGGGAGATTTATTGAGTCTTTGTAGTTCTCACCAACTAAAATTGATAATAACAACCAAACAGTAGCCATATAATGTAGTACTTAACAACTCTTCTGTATTGAATTGTTCCAAATATGGATTTCAGAGCTCCAAGGTATTTAGGAAGTGAAAAGAAGATAATGGATTCAACTCAGAATGCATCTTCAGCTGCTGGGACCGGTGGAAGTGGTGGCAATGGATCGGTCATCAATGATACGTCTGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGCATCCTCCATCAGCTCAACCTCACCGTCACCAACTTCAATGCCGCCTATCAGCTGCCGCTTTTACAACGCATGTACGCTCAGTTTTGCTTTGTCTAATATCTACTTCGTTCTTTATTCCCTCCTTATTCCACTCTATACCAGTGATATTCTTCTCGATTTTACAGTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAGTTATCAGAGAAATGCACCATCCAGGTCCCCATGGAGGTTGTTAAGTGAGTCTTTGTGCACCCTTTCTGATCTCTAGCCTTGCAAACTTTTTTTTTCCTGACATTTCAATTTTTTCTTGGTCTACTTCTTACTTTTCTTTTGATTAGTTTGATCGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCTTTACATGGAGATGTAGCAGGCTGTTAAAAATCTACTTACCTCTTATTTGTATCTTGATTTCCAAAGATTTACAAAAATCTTTATTGAATGTTGTACTACTTACTATATTCAGGGTTTACGGAAGCATCTTTTGGAAGAACTTGAACAGACATTTCCTGATGAAGTAGAGTCTTACAGAGAAATTCGTGCTGCTTCTGCTGCCGTGAGTTAAAATTTCTTTCCTGTGGTCAATTTTATCTCTTTCTTCAAGTTTTGCTCAAAATTATTGGATGTGTGTGTTTATTAATTTTCAAGCTTATCAAAAATATTTTCTTGGTTCTTATGGATTAATTTGTACTTTATCTATAACCATAATTTCCATGTTTTCTCGAAGTCTGCATCATCCTTTCTAGCATTTCATGGCTATTTATATATTTTTGGTGGTTTTAGATATCAAACTTCAGAAATGTACAAAAATGTAAATATGTAAGCTATGTTTTGGTGTAAGTTCTAGGTATAGTCGAATGTCCATTGCTTTAATTATATGTTAAGTTATAAAGACTCACTTTAGACTTTCCTAGTCATAGGAGTCTTTAATATAAGATATTGGACAAATTCTATTCTGTTATTTTGAGTTTGGTTGCAGGTAATAGTTGCTTCATTGTATAGTTTCTATTGGTTTTCTTTTATTGTATGAAAATGTGAGGAAACAAGTAGCATTTTTGTTTTGTGATTCATAGGATGGTTGAATTCTGTTTGCTTGAAAAACTACTTTTTGGTTATTTTATAAACATCTCTCAAGCCAATTTTACCTCGCAATTTTCTCCTTTGTGATTGAAGGAGTTTAATGTCTTTAGACACCCCTTTTTGTAATCCTTCCTTTGGGAGAGGGGATGCCTTATCCTTTGTTCCTTAGGTTGTTTTGTTTGGTTTTTTTGCCTCTTTGACTGAAGTGCTCTCGTTTCTTTAAAAAAAAAGAGTTTAATTTATCTAGAATCAGATTAAACTACTTTAGCTCCTTGTTTGTTGAACAGGGTTTTGTGATTAGCTTATGTGAAATAAAGAACTTGTAATACTTCCTGCCTTAAATTCTGTAACCATCCTTCCAGTTTTGGCGCAAGGTTGATGGTATTTTCAAAAACCATAAAATTGATCAGTGATCACAGCCTTGCTTATTCCAATTGGTGTCTGTCTGTATATATGCTCCTACTACCGTCCTCTTGACCAGTACTAAATCTTTTGTGATATCAAGGTTTGTCTATCGCATGGTCAAGTGGAAATTAGGGTACTGGAGTTTTTTGTACTTGCTGGCTGTTTTAAGTTTCACAAATTACAATTCTTGCCAGTACCTTAAGCTTAGTGATTACTATATGTGGCATTGTGTCACGGGGTAATTTCGATCACAAAATTTTTACCCACGTGTGGCCTAAGGTGCTCCCTTAGTAGTTAGTACAACCTCATACTATCCCTGTAGTTCTTTTCTTAGGTTAGTTGCGGAAATAAACACTCTTCACCACTTCCACTTTGGTCATGACTCGCACATCGTGTCGCTCACAAGATCTCAACACTTGCTCTCTCAAGTGTCATGTCACTTCGTGTGCACATACACATATCACGAGCACATAAGCCATGTAGTAGAGTTGCAAAGCCAACATACGGGAAAACTCACTCCCAACCTTCTTCATTTACACACATGAATAAGGAATATATGTTACAACCTTCTTCATTTACACACATGGATAAGGAATATATGTTACAACCTAATGGCATATGTACCCAAGCACTACAAAATTGACACACCCAAGGCAAGAGTTCTCCCAATATCTCTTCCTCACACCAAGACTCACTCTTGAATCAAGGTTTATGGAATTCTCATCATGGGGAGTCGATTTTTTCCTTTGTGTGGAAGGTGAAAGTGCCGAATAAGATTAGGTTATTTATTTGGCAAGTTATCCATGGTAAAGTAAATACTTTCAATAGGCTCTTGAGAAGTATGCCCTCGCTGGTGGGCCCGTTATATTGTATTCTTTGTCGGAAGGCGGAGAAAAATCTGGATCACATTCTTCGTGCTTGTGACTATGCTTACATGGTGTGGGATTTGTTCTATGATGCTTTTGGGATGCAGTCGCAGAGTTATCTGAATGTTAGGGAGATGATCGAGGAGTTCCTCTTCCATCTGCCTTTTTGCGAGAAGGGGAGATTCTTGTGGCAAGCTGGGCTGTGTGCTTTGTTATGGTTCTTATGGGGGGAAAGAAATAATAGTGTTTAGGGGGTTGGAGATAGACCCAAGGGATGCATGGTCACTCGCTAGATTCCATGTGTCCCTTTGGGCTTCGGTGTCGAAACTTTTTTGTAATTATCCGTTAGGCATCATTTTACTTGATTGGGGTCCTTTCCTTTAATTGGATCCTTTTTTTTTGTGGGCTTGTTTTTTTGTATGCCCTTGTATTCTTTCATTTTTTCTCAATGAAAGCTAGTTCTTTATTAAAAAAAATAGAATTCCCACATAGAATCCATAATCAAGACCTCATTTGAATCCTCTCTGGAAGACTCCTCACAAGTCACTTTAAAGACTCTTAAAAGACTATCCCAAAGACCTCATGAAGAGACCTGCCAAAGGCCTCTTGAAAAGACCAACCTAAGGCCTCTTGCACAACTCTTGCAAGCTTGCCTTTATATAGACAAAGGGAATGGTAGAATTGCAATTAAAGAGAAGTTGTGGATAAGGATGCCCATTTGAATTTCATTCTTATCCAAACTCATACTTATCCAATATTTGAATTCATACCTTTGAATTCAAATCCCAAGAGTTACCATCTTGCTTCTAGGATCGCCAAGTGTCAAGCATGCATTTTTGTATGTCAATATGTTGCCAAGTGTCCACCATGTGTCTTCCATGCAAAATGCTCTTCTAAATGCTTGCCACGTGTCCCATCAATGGATAAATCCTTTCCCAAGTGCTTCCACGCAAATCGGGTTAGTAATCGCCAACTTGGTCAGTTATGGTCCTCCAATGGACTTGTCATAAACGTGTACCACTTGTTCTTCTCTCGAACTTGGACCTGTGGGTAATGAGCACCAACCCACTTTTTGGCTTCTTTCCTCTGATTTTTGCGGTGGGTCTTCTTCATTTGGACGATTTCTTAGATATTCAGTCGTGGGTTGCAAAACTTCGGTATCCTTCTGTTATTTCCAACTTTAATATCCTTAAGATTGCTTGGTTCATTGTTTTATTTTACCTTACGAAAATTTTCGCCTTCTTTCTGACGGTAGAAGTGTGTGGCCTAAGAGATCCTCTTAGTACAACAATTTATTTTTTTGCCTTCTTTCTGATTGTCGTGGGTTGCAAAACTTTGGTATCCTTCCCTTATTTCCAACTTTAATCCTTAAGATTGCTTGGTTCATTGTTGTATTTTACCTTACGAAAATTTTTGCCTTCCTTCTAACGGTAGAAGTGTGCGGTCTAAGAGATCCTCTTAGTACAACCTTTTATTTTTCCCCTCAGTCCCACAAAATGCACATAAGAATGGTCAAGAACATATACCAAGGATGCTAACTCGTTGTAGCTTTGATGGACGAACTGCTCAATGCAAGATATGTTCGAGAAATGTCCTCAACTTCTCTTTTATTGCGTAAGGTAAAATACAAAATGAACTCCCTCACTTTGTACAATTTCACTCTCACCCAAAATTGTGTCTTTCCCAAATGAAAAGACTCCCTCCCTTTTATAAGAAGAGATGTGGATGTTGGTGTCCAAGTTATTATCCACACATCCATCTCCAAATCTACCCAATTGGAGACAAATGTCCTCCGAGTGGTGGCTCTCCAATCATGGCCTTTAACTCCTTTAAAGGGTGGCTTCCTCTTCAATCTTCATCATCTTTGAAGTTGCAAGACATCTCTCATGGATTGAGACTCATTTTGTGGGTAGATCGTAGAAGAACTCCTGCAGCCTCCTGCTCATGCTCCTGCTCCTGCTCAGGTATATCAGGGAGGTCCTCGTTCAACCAATTGTCGGCCTGTCTCAAGGCCTTTCATACTTCACGTGGCGGGTACATCAGATGCTCTTCAACGCTTGTCTTGATTTCGTTGATCTCTTCACTCAACAGGTGGAGATCGTGACGAAGGGTGTCGAGCCCGATTCTCGCAGTCTGCTGTAG

mRNA sequence

ATGGATTCAACTCAGAATGCATCTTCAGCTGCTGGGACCGGTGGAAGTGGTGGCAATGGATCGGTCATCAATGATACGTCTGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGCATCCTCCATCAGCTCAACCTCACCGTCACCAACTTCAATGCCGCCTATCAGCTGCCGCTTTTACAACGCATTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAGTTATCAGAGAAATGCACCATCCAGGTCCCCATGGAGGTTGTTAATTTGATCGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGGTTTACGGAAGCATCTTTTGGAAGAACTTGAACAGACATTTCCTGATGAAGTAGAGTCTTACAGAGAAATTCGTGCTGCTTCTGCTGCCGCGGAGAAAAATCTGGATCACATTCTTCGTGCTTGTGACTATGCTTACATGGTGTGGGATTTGTTCTATGATGCTTTTGGGATGCAGTCGCAGAGTTATCTGAATGTTAGGGAGATGATCGAGGAGTTCCTCTTCCATCTGCCTTTTTGCGAGAAGGGGAGATTCTTGTGGCAAGCTGGGCTGTGTGCTTTGTTATGGTATATCAGGGAGGTCCTCGTTCAACCAATTGTCGGCCTGTCTCAAGGCCTTTCATACTTCACGTGGCGGGTACATCAGATGCTCTTCAACGCTTGTCTTGATTTCGTTGATCTCTTCACTCAACAGGTGGAGATCGTGACGAAGGGTGTCGAGCCCGATTCTCGCAGTCTGCTGTAG

Coding sequence (CDS)

ATGGATTCAACTCAGAATGCATCTTCAGCTGCTGGGACCGGTGGAAGTGGTGGCAATGGATCGGTCATCAATGATACGTCTGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGCATCCTCCATCAGCTCAACCTCACCGTCACCAACTTCAATGCCGCCTATCAGCTGCCGCTTTTACAACGCATTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAGTTATCAGAGAAATGCACCATCCAGGTCCCCATGGAGGTTGTTAATTTGATCGATGATGGGAAGAATCCAGATGAATTCACGAGGGATGTCTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGGTTTACGGAAGCATCTTTTGGAAGAACTTGAACAGACATTTCCTGATGAAGTAGAGTCTTACAGAGAAATTCGTGCTGCTTCTGCTGCCGCGGAGAAAAATCTGGATCACATTCTTCGTGCTTGTGACTATGCTTACATGGTGTGGGATTTGTTCTATGATGCTTTTGGGATGCAGTCGCAGAGTTATCTGAATGTTAGGGAGATGATCGAGGAGTTCCTCTTCCATCTGCCTTTTTGCGAGAAGGGGAGATTCTTGTGGCAAGCTGGGCTGTGTGCTTTGTTATGGTATATCAGGGAGGTCCTCGTTCAACCAATTGTCGGCCTGTCTCAAGGCCTTTCATACTTCACGTGGCGGGTACATCAGATGCTCTTCAACGCTTGTCTTGATTTCGTTGATCTCTTCACTCAACAGGTGGAGATCGTGACGAAGGGTGTCGAGCCCGATTCTCGCAGTCTGCTGTAG

Protein sequence

MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNLDHILRACDYAYMVWDLFYDAFGMQSQSYLNVREMIEEFLFHLPFCEKGRFLWQAGLCALLWYIREVLVQPIVGLSQGLSYFTWRVHQMLFNACLDFVDLFTQQVEIVTKGVEPDSRSLL

Homology

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BLAST of Spg021361 vs. NCBI nr
Match: XP_022923485.1 (mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923486.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923487.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923488.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923489.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923491.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923492.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022965379.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965380.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965381.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965383.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965384.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965385.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965386.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_023553208.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553209.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553210.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553211.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553212.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-80
Identity = 164/171 (95.91%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRI 171

[Close]

BLAST of Spg021361 vs. NCBI nr
Match: KAG6577769.1 (Mediator of RNA polymerase II transcription subunit 10b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 309.3 bits (791), Expect = 3.5e-80
Identity = 164/171 (95.91%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRI 171

[Close]

BLAST of Spg021361 vs. NCBI nr
Match: KAG7015809.1 (Mediator of RNA polymerase II transcription subunit 10b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 307.4 bits (786), Expect = 1.3e-79
Identity = 164/172 (95.35%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNLD 173
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA     D
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAVRIKKD 172

[Close]

BLAST of Spg021361 vs. NCBI nr
Match: XP_008448559.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448560.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448561.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.5e-78
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRI 171

[Close]

BLAST of Spg021361 vs. NCBI nr
Match: XP_038876576.1 (mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876578.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876579.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida] >XP_038876580.1 mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida])

HSP 1 Score: 303.5 bits (776), Expect = 1.9e-78
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGS GNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSSGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCAIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRI 171

[Close]

BLAST of Spg021361 vs. ExPASy Swiss-Prot
Match: F4HPA7 (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana OX=3702 GN=MED10B PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-59
Identity = 129/175 (73.71%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD TQN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTVT+F  A QL LLQR+NSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  K L
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRL 171

[Close]

BLAST of Spg021361 vs. ExPASy Swiss-Prot
Match: Q9FHZ2 (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana OX=3702 GN=MED10A PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-53
Identity = 118/172 (68.60%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD TQN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLN- 120
           ++F  A QL LLQR+NSLV+ELDNM KLS+KC IQVP+EV+NLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AA  K L
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRL 168

[Close]

BLAST of Spg021361 vs. ExPASy Swiss-Prot
Match: Q16G71 (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 GN=MED10 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.7e-16
Identity = 42/123 (34.15%), Postives = 75/123 (60.98%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + V++F    Q  L Q+I SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64

Query: 99  EVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++  + +L++EL++TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELDETFPTEIAKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Spg021361 vs. ExPASy Swiss-Prot
Match: Q7Q5R5 (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7165 GN=MED10 PE=3 SV=2)

HSP 1 Score: 85.9 bits (211), Expect = 8.3e-16
Identity = 42/123 (34.15%), Postives = 74/123 (60.16%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + V++F    Q  L Q+I SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64

Query: 99  EVVNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYR 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++  + +L++EL +TFP E+  Y+
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYRKFKSNLMKELSETFPVEISKYK 124

Query: 159 EIR 162
            IR
Sbjct: 125 AIR 127

[Close]

BLAST of Spg021361 vs. ExPASy Swiss-Prot
Match: Q9CXU0 (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 GN=Med10 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 7.7e-14
Identity = 41/117 (35.04%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 46  IQKTLGILHQLNLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKC-TIQVPMEVVNLI 105
           ++K +  + QL + V++F  + Q  L Q++N +V  L ++ K  ++   I VP+EV   I
Sbjct: 12  LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYI 71

Query: 106 DDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIR 162
           D G+NP  +T++ L   +AKN+  KGK D  K  +  L++EL + FP+++  YR IR
Sbjct: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIR 128

[Close]

BLAST of Spg021361 vs. ExPASy TrEMBL
Match: A0A6J1HLJ2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111465259 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.7e-80
Identity = 164/171 (95.91%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRI 171

[Close]

BLAST of Spg021361 vs. ExPASy TrEMBL
Match: A0A6J1E6X8 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111431167 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 1.7e-80
Identity = 164/171 (95.91%), Postives = 167/171 (97.66%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAESKRI 171

[Close]

BLAST of Spg021361 vs. ExPASy TrEMBL
Match: A0A1S3BJY3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 7.1e-79
Identity = 161/171 (94.15%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRI 171

[Close]

BLAST of Spg021361 vs. ExPASy TrEMBL
Match: A0A0A0L3Q2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=3659 GN=MED10 PE=3 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 2.7e-78
Identity = 160/171 (93.57%), Postives = 164/171 (95.91%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDT  STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 61  MDSAQNASSAAGTGGSGGNGSVINDTPVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 120

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLVLELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 121 SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 180

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 181 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRI 231

[Close]

BLAST of Spg021361 vs. ExPASy TrEMBL
Match: A0A6J1CVZ0 (Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX=3673 GN=LOC111014791 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 3.5e-78
Identity = 158/171 (92.40%), Postives = 165/171 (96.49%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDS QNASSAAGTGGSGGNGSVINDTSAS TVDDSKQNLNQVINSIQKTLG+LHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASATVDDSKQNLNQVINSIQKTLGLLHQLNLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120
           +NFNAAYQLPLLQR+NSLV+ELDNMVKLSEKC IQVPMEV+NLIDDGKNPDEFTRDV+NS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVMELDNMVKLSEKCNIQVPMEVLNLIDDGKNPDEFTRDVINS 120

Query: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAA  K +
Sbjct: 121 CIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAEAKRI 171

[Close]

BLAST of Spg021361 vs. TAIR 10
Match: AT1G26665.2 (Mediator complex, subunit Med10 )

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 129/175 (73.71%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD TQN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTVT+F  A QL LLQR+NSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  K L
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAVTKRL 171

[Close]

BLAST of Spg021361 vs. TAIR 10
Match: AT1G26665.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 230.7 bits (587), Expect = 1.5e-60
Identity = 129/175 (73.71%), Postives = 146/175 (83.43%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD TQN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVTNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRD 120
           +LTVT+F  A QL LLQR+NSLV+ELDNM KLSEKC IQ+PMEV+NLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           VLNSCIA+NQ TKGKTDAFK LRKH+LEELEQ FPDEV+ YREIRA+SAA  K L
Sbjct: 121 VLNSCIARNQVTKGKTDAFKDLRKHILEELEQNFPDEVDMYREIRASSAAEAKRL 171

[Close]

BLAST of Spg021361 vs. TAIR 10
Match: AT5G41910.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-54
Identity = 118/172 (68.60%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 1   MDSTQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD TQN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  TNFNAAYQLPLLQRINSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLN- 120
           ++F  A QL LLQR+NSLV+ELDNM KLS+KC IQVP+EV+NLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKGLRKHLLEELEQTFPDEVESYREIRAASAAAEKNL 172
           +CIAKNQ TKGK+DAFKGLRKHLLEELEQ FPDEV+ YR+IRA+ AA  K L
Sbjct: 121 NCIAKNQVTKGKSDAFKGLRKHLLEELEQAFPDEVDRYRDIRASYAAEAKRL 168

The following BLAST results are available for this feature:

BLAST of Spg021361 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923485.1	3.5e-80	95.91	mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata...	[more]
KAG6577769.1	3.5e-80	95.91	Mediator of RNA polymerase II transcription subunit 10b, partial [Cucurbita argy...	[more]
KAG7015809.1	1.3e-79	95.35	Mediator of RNA polymerase II transcription subunit 10b [Cucurbita argyrosperma ...	[more]
XP_008448559.1	1.5e-78	94.15	PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [C...	[more]
XP_038876576.1	1.9e-78	94.15	mediator of RNA polymerase II transcription subunit 10b-like [Benincasa hispida]...	[more]

BLAST of Spg021361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPA7	1.6e-59	73.71	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana ...	[more]
Q9FHZ2	3.8e-53	68.60	Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana ...	[more]
Q16G71	3.7e-16	34.15	Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 ...	[more]
Q7Q5R5	8.3e-16	34.15	Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7...	[more]
Q9CXU0	7.7e-14	35.04	Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 ...	[more]

BLAST of Spg021361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLJ2	1.7e-80	95.91	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E6X8	1.7e-80	95.91	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=...	[more]
A0A1S3BJY3	7.1e-79	94.15	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 G...	[more]
A0A0A0L3Q2	2.7e-78	93.57	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis sativus OX=365...	[more]
A0A6J1CVZ0	3.5e-78	92.40	Mediator of RNA polymerase II transcription subunit 10 OS=Momordica charantia OX...	[more]

BLAST of Spg021361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26665.2	1.1e-60	73.71	Mediator complex, subunit Med10	[more]
AT1G26665.1	1.5e-60	73.71	Mediator complex, subunit Med10	[more]
AT5G41910.1	2.7e-54	68.60	Mediator complex, subunit Med10	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019145	Mediator complex, subunit Med10	PFAM	PF09748	Med10	coord: 45..158 e-value: 3.1E-28 score: 98.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 1..171
None	No IPR available	PANTHER	PTHR13345:SF9	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10A-RELATED	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021361.1	Spg021361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity