Spg021273 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021273
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold6: 46107056 .. 46107751 (-)
RNA-Seq ExpressionSpg021273
SyntenySpg021273
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGCGTGGAAGATCCTCAACGACATTATCCCCAACAAAGCAAACATAAAAAAGAAAGGGATTGACTTTAATTCTACCTGCTCTTTATGTGGAAAAAAAAATGAGAACACGAGCCACCTCATATGGGAATGTAAATTCTCAAGAGGAATATGGCGGAATTTAATTCTAAAATCTCTAACCATGTTTAACCTTTGCAGGGAAAGATGGCAACCTATGGACTATTGGCAGTGGTTGGTAGAGAACACCGAGAATGGAGACCTCGACAGGGTTGTGATTATTATGTGGTGCATTTGGAATTCAAGAAATAGAAGAATCTCAGGCCAACATTTTCTAGACCAGAACATCAATCAGACTATTTCTCAAATTCAAGATTTTTTCAAAGAGCAAATAGATGGTGGTACCTTGCGTAGCAATCCCTCGACGTCAAAGAAAACAGGGAGCCATCTGAGTCATGAAGAGTGGAAGAATCCACCCCTAAATTCATGGAAATTGAACACCGACGCCGCCTGGTTCGACGAGATCGGGATGGGAGGTATCAAATGGGTGCTTCGTGACTCCGTCGGATCCCCGATTTCCTTTGGCCTGAAGAAGATTGACCAAAAAATTAATATGAAATCCCTGGAAGCCATGGCCATTTGGGAAGGGCTCACACCTTTATTTTCAGAATCTTCAAGGAGAATCACCCTCGTTTGA

mRNA sequence

ATGTGTGCGTGGAAGATCCTCAACGACATTATCCCCAACAAAGCAAACATAAAAAAGAAAGGGATTGACTTTAATTCTACCTGCTCTTTATGTGGAAAAAAAAATGAGAACACGAGCCACCTCATATGGGAATGTAAATTCTCAAGAGGAATATGGCGGAATTTAATTCTAAAATCTCTAACCATGTTTAACCTTTGCAGGGAAAGATGGCAACCTATGGACTATTGGCAGTGGTTGGTAGAGAACACCGAGAATGGAGACCTCGACAGGGTTGTGATTATTATGTGGTGCATTTGGAATTCAAGAAATAGAAGAATCTCAGGCCAACATTTTCTAGACCAGAACATCAATCAGACTATTTCTCAAATTCAAGATTTTTTCAAAGAGCAAATAGATGGTGGTACCTTGCGTAGCAATCCCTCGACGTCAAAGAAAACAGGGAGCCATCTGAGTCATGAAGAGTGGAAGAATCCACCCCTAAATTCATGGAAATTGAACACCGACGCCGCCTGGTTCGACGAGATCGGGATGGGAGGTATCAAATGGGTGCTTCGTGACTCCGTCGGATCCCCGATTTCCTTTGGCCTGAAGAAGATTGACCAAAAAATTAATATGAAATCCCTGGAAGCCATGGCCATTTGGGAAGGGCTCACACCTTTATTTTCAGAATCTTCAAGGAGAATCACCCTCGTTTGA

Coding sequence (CDS)

ATGTGTGCGTGGAAGATCCTCAACGACATTATCCCCAACAAAGCAAACATAAAAAAGAAAGGGATTGACTTTAATTCTACCTGCTCTTTATGTGGAAAAAAAAATGAGAACACGAGCCACCTCATATGGGAATGTAAATTCTCAAGAGGAATATGGCGGAATTTAATTCTAAAATCTCTAACCATGTTTAACCTTTGCAGGGAAAGATGGCAACCTATGGACTATTGGCAGTGGTTGGTAGAGAACACCGAGAATGGAGACCTCGACAGGGTTGTGATTATTATGTGGTGCATTTGGAATTCAAGAAATAGAAGAATCTCAGGCCAACATTTTCTAGACCAGAACATCAATCAGACTATTTCTCAAATTCAAGATTTTTTCAAAGAGCAAATAGATGGTGGTACCTTGCGTAGCAATCCCTCGACGTCAAAGAAAACAGGGAGCCATCTGAGTCATGAAGAGTGGAAGAATCCACCCCTAAATTCATGGAAATTGAACACCGACGCCGCCTGGTTCGACGAGATCGGGATGGGAGGTATCAAATGGGTGCTTCGTGACTCCGTCGGATCCCCGATTTCCTTTGGCCTGAAGAAGATTGACCAAAAAATTAATATGAAATCCCTGGAAGCCATGGCCATTTGGGAAGGGCTCACACCTTTATTTTCAGAATCTTCAAGGAGAATCACCCTCGTTTGA

Protein sequence

MCAWKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITLV
Homology
BLAST of Spg021273 vs. NCBI nr
Match: XP_022154990.1 (uncharacterized protein LOC111022134 isoform X1 [Momordica charantia])

HSP 1 Score: 120.2 bits (300), Expect = 2.4e-23
Identity = 70/199 (35.18%), Postives = 93/199 (46.73%), Query Frame = 0

Query: 33  KKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVV 92
           KK E T H++WECK  + IW N        F + R  W   +YW+WL++     +  R +
Sbjct: 132 KKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRSM 191

Query: 93  IIMWCIWNSRNRRI-SGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLS 152
           II   IW  RN+ I  G H   ++I   I +       Q      +S      +     +
Sbjct: 192 IIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDNT 251

Query: 153 HEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAM 212
              WK P  NSWKLNTDAAW  +    GI W+LRD  G  I  G + I  + N+  LE M
Sbjct: 252 RARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVM 311

Query: 213 AIWEGLTPLFSESSRRITL 231
           AI EGL  +  E  R I L
Sbjct: 312 AICEGLRAIRQEHCRPIHL 330

BLAST of Spg021273 vs. NCBI nr
Match: XP_022143317.1 (uncharacterized protein LOC111013216 [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 9.8e-17
Identity = 60/173 (34.68%), Postives = 80/173 (46.24%), Query Frame = 0

Query: 67  RERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDF 126
           R  W   D W WLV    + ++   ++I W IW SRNR I     +D+   Q    I  F
Sbjct: 10  RVHWTNKDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDE--QQLDRSIVLF 69

Query: 127 FKEQIDGGTLRSNPSTSKKTGSHLSH---------EEWKNPPLNSWKLNTDAAWFDEIGM 186
               ID GT  S    S++   +L             W  PP N WKLNTDA+W +E  +
Sbjct: 70  INSNIDKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREV 129

Query: 187 GGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL 231
           GGI W+L D  G  +  G  KI +K  + +LE M I  GL  +  +S   I L
Sbjct: 130 GGIGWILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQFINMQSRSPIYL 180

BLAST of Spg021273 vs. NCBI nr
Match: KAF4350693.1 (hypothetical protein F8388_003414 [Cannabis sativa])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-16
Identity = 56/232 (24.14%), Postives = 111/232 (47.84%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------I 63
           W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        
Sbjct: 506 WRVCHNWLPAKMNLKHRGMEVNTRCELCARYDETLTHALWSCDKVKSIWKLLPWYKQASK 565

Query: 64  LKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNI 123
           L   +MF++ +           L +     D +  + I+W IW +RNR+ +    +++  
Sbjct: 566 LGEGSMFDILKS----------LEQTINRQDFEDAIKILWAIWENRNRKWNQLPCMNR-- 625

Query: 124 NQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIG 183
                Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D   
Sbjct: 626 ----QQLLNWVFSAYPNGHTEAVPAVNHEADLNSHQKKWIPPASGSICVNCDAAVVDNTA 685

Query: 184 MGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRI 229
             GI+++ R + G  +S G++ ++   + K+ EA A+WE L  L +  + RI
Sbjct: 686 GVGIEFIWRKADGQMLSAGMRYLNNCCSPKTAEAWALWEALNNLPATETSRI 721

BLAST of Spg021273 vs. NCBI nr
Match: KAF4380543.1 (hypothetical protein G4B88_027634 [Cannabis sativa])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-16
Identity = 56/232 (24.14%), Postives = 111/232 (47.84%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------I 63
           W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        
Sbjct: 590 WRVCHNWLPAKMNLKHRGMEVNTRCELCARYDETLTHALWSCDKVKSIWKLLPWYKQASK 649

Query: 64  LKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNI 123
           L   +MF++ +           L +     D +  + I+W IW +RNR+ +    +++  
Sbjct: 650 LGEGSMFDILKS----------LEQTINRQDFEDAIKILWAIWENRNRKWNQLPCMNR-- 709

Query: 124 NQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIG 183
                Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D   
Sbjct: 710 ----QQLLNWVFSAYPNGHTEAVPAVNHEADLNSHQKKWIPPASGSICVNCDAAVVDNTA 769

Query: 184 MGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRI 229
             GI+++ R + G  +S G++ ++   + K+ EA A+WE L  L +  + RI
Sbjct: 770 GVGIEFIWRKADGQMLSAGMRYLNNCCSPKTAEAWALWEALNNLPATETSRI 805

BLAST of Spg021273 vs. NCBI nr
Match: XP_030487056.1 (uncharacterized protein LOC115703971 [Cannabis sativa])

HSP 1 Score: 97.8 bits (242), Expect = 1.3e-16
Identity = 57/226 (25.22%), Postives = 109/226 (48.23%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-ILKSLTM 63
           W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   +GIW+ L   K  + 
Sbjct: 85  WRVCHNWLPAKMNLKHRGMEVNTRCELCARYDETLTHALWSCDKVKGIWKLLPCYKQASK 144

Query: 64  FNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQ 123
                      D  + L +     D +  + I+W IW +RNR+ +    +++       Q
Sbjct: 145 LG----EGSMFDILKSLEQTINRQDFEDAIKILWEIWENRNRKWNQLPCMNK------QQ 204

Query: 124 IQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIGMGGIKW 183
           + ++       G   + P+ + +   +   ++W  P   S  +N DAA  D     GI++
Sbjct: 205 LLNWVFSAYPNGYTEAVPAINHEADLNSHQKQWIPPASGSICVNCDAAVVDNTPGVGIRF 264

Query: 184 VLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRI 229
           + R + G  IS G++ ++   + K+ EA A+WE L  L +  + RI
Sbjct: 265 IWRRADGQMISAGMRYLNSCCSPKTAEAWALWEALNNLPATETSRI 300

BLAST of Spg021273 vs. ExPASy TrEMBL
Match: A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-23
Identity = 70/199 (35.18%), Postives = 93/199 (46.73%), Query Frame = 0

Query: 33  KKNENTSHLIWECKFSRGIWRNLILKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVV 92
           KK E T H++WECK  + IW N        F + R  W   +YW+WL++     +  R +
Sbjct: 132 KKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRSM 191

Query: 93  IIMWCIWNSRNRRI-SGQHFLDQNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLS 152
           II   IW  RN+ I  G H   ++I   I +       Q      +S      +     +
Sbjct: 192 IIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDNT 251

Query: 153 HEEWKNPPLNSWKLNTDAAWFDEIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAM 212
              WK P  NSWKLNTDAAW  +    GI W+LRD  G  I  G + I  + N+  LE M
Sbjct: 252 RARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVM 311

Query: 213 AIWEGLTPLFSESSRRITL 231
           AI EGL  +  E  R I L
Sbjct: 312 AICEGLRAIRQEHCRPIHL 330

BLAST of Spg021273 vs. ExPASy TrEMBL
Match: A0A803QCG6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.6e-19
Identity = 70/219 (31.96%), Postives = 107/219 (48.86%), Query Frame = 0

Query: 3    AWKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTM 62
            AWK+ ++I+P  A + K+ I  ++ CSLC    E+  H +++CK +R IW++   K LT 
Sbjct: 1435 AWKVHHNILPTAAALHKRKIIDSAACSLCTSSWESVGHALFDCKHARKIWQD--SKFLTD 1494

Query: 63   FNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQN--INQTI 122
            FN+ +   Q  DY Q L       D + +V IMW IW  RN+   G      +  +    
Sbjct: 1495 FNMAK-TMQNGDYLQLLSSVYTKEDFELLVCIMWGIWTDRNKIFHGGQARPSSSIVAYAT 1554

Query: 123  SQIQDFFKEQIDGGTLRSNPSTSK-KTGSHLSHE-EWKNPPLNSWKLNTDAAWFDEIGMG 182
            S  QD+ + +   G   ++PST      +H   +  W  P LN +KLN DAA   E  + 
Sbjct: 1555 SFHQDYCRAKSHSGRTATSPSTDPLPINNHQKKQVPWSAPTLNGYKLNVDAATNTEQKLL 1614

Query: 183  GIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGL 218
            GI  +LRD  G  I+   K +        +EA A++  L
Sbjct: 1615 GIGAILRDHNGMVIAALSKTVQGTFRSDEMEAKALFHAL 1650

BLAST of Spg021273 vs. ExPASy TrEMBL
Match: A0A6J1CQG0 (uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013216 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.7e-17
Identity = 60/173 (34.68%), Postives = 80/173 (46.24%), Query Frame = 0

Query: 67  RERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNINQTISQIQDF 126
           R  W   D W WLV    + ++   ++I W IW SRNR I     +D+   Q    I  F
Sbjct: 10  RVHWTNKDSWNWLVNMLSDEEVATSMVIAWQIWESRNRSIFRGETIDE--QQLDRSIVLF 69

Query: 127 FKEQIDGGTLRSNPSTSKKTGSHLSH---------EEWKNPPLNSWKLNTDAAWFDEIGM 186
               ID GT  S    S++   +L             W  PP N WKLNTDA+W +E  +
Sbjct: 70  INSNIDKGTCISQTRRSQQNDGYLPRGRENLNMLGVRWSAPPTNCWKLNTDASWSEEREV 129

Query: 187 GGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRITL 231
           GGI W+L D  G  +  G  KI +K  + +LE M I  GL  +  +S   I L
Sbjct: 130 GGIGWILCDCRGEIVLAGNCKIREKKEINALELMTIIRGLQFINMQSRSPIYL 180

BLAST of Spg021273 vs. ExPASy TrEMBL
Match: A0A7J6DX20 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003414 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-17
Identity = 56/232 (24.14%), Postives = 111/232 (47.84%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------I 63
           W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        
Sbjct: 506 WRVCHNWLPAKMNLKHRGMEVNTRCELCARYDETLTHALWSCDKVKSIWKLLPWYKQASK 565

Query: 64  LKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNI 123
           L   +MF++ +           L +     D +  + I+W IW +RNR+ +    +++  
Sbjct: 566 LGEGSMFDILKS----------LEQTINRQDFEDAIKILWAIWENRNRKWNQLPCMNR-- 625

Query: 124 NQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIG 183
                Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D   
Sbjct: 626 ----QQLLNWVFSAYPNGHTEAVPAVNHEADLNSHQKKWIPPASGSICVNCDAAVVDNTA 685

Query: 184 MGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRI 229
             GI+++ R + G  +S G++ ++   + K+ EA A+WE L  L +  + RI
Sbjct: 686 GVGIEFIWRKADGQMLSAGMRYLNNCCSPKTAEAWALWEALNNLPATETSRI 721

BLAST of Spg021273 vs. ExPASy TrEMBL
Match: A0A7J6GC45 (CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_027634 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.2e-17
Identity = 56/232 (24.14%), Postives = 111/232 (47.84%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNL-------I 63
           W++ ++ +P K N+K +G++ N+ C LC + +E  +H +W C   + IW+ L        
Sbjct: 590 WRVCHNWLPAKMNLKHRGMEVNTRCELCARYDETLTHALWSCDKVKSIWKLLPWYKQASK 649

Query: 64  LKSLTMFNLCRERWQPMDYWQWLVENTENGDLDRVVIIMWCIWNSRNRRISGQHFLDQNI 123
           L   +MF++ +           L +     D +  + I+W IW +RNR+ +    +++  
Sbjct: 650 LGEGSMFDILKS----------LEQTINRQDFEDAIKILWAIWENRNRKWNQLPCMNR-- 709

Query: 124 NQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEIG 183
                Q+ ++       G   + P+ + +   +   ++W  P   S  +N DAA  D   
Sbjct: 710 ----QQLLNWVFSAYPNGHTEAVPAVNHEADLNSHQKKWIPPASGSICVNCDAAVVDNTA 769

Query: 184 MGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGLTPLFSESSRRI 229
             GI+++ R + G  +S G++ ++   + K+ EA A+WE L  L +  + RI
Sbjct: 770 GVGIEFIWRKADGQMLSAGMRYLNNCCSPKTAEAWALWEALNNLPATETSRI 805

BLAST of Spg021273 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-12
Identity = 50/222 (22.52%), Postives = 99/222 (44.59%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMF 63
           W+ L+  +     +  +G+  + +C  C ++NE+ +H ++ C F+   WR      L+  
Sbjct: 176 WRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWR------LSDS 235

Query: 64  NLCRERWQPMDYWQWL------VENTENGDLDRV--VIIMWCIWNSRNRRISGQHFLDQN 123
           +L R +    D+ + +      V++T   D  ++  V ++W IW +RN  +  + F +  
Sbjct: 236 SLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNK-FRESP 295

Query: 124 INQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFDEI 183
               +S   +         + +  PS +++     +  EW+NPP    K N DA +  + 
Sbjct: 296 SKTVLSAKAETHDWLNATQSHKKTPSPTRQIAE--NKIEWRNPPATYVKCNFDAGFDVQK 355

Query: 184 GMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLEAMAIWEGL 218
                 W++R+  G+PIS+G  K+    N    E  A+   L
Sbjct: 356 LEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAAL 388

BLAST of Spg021273 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 3.7e-06
Identity = 38/162 (23.46%), Postives = 67/162 (41.36%), Query Frame = 0

Query: 65  LCRERWQPMDYWQWLVENTENGDLDRVV-----IIMWCIWNSRN------RRISGQHFLD 124
           LC     P +  + + +   +  +DRV       +MW IW S N       R   Q  ++
Sbjct: 13  LCDNGIPPEEKLRIIFQMHNDSRVDRVTRFMPFWLMWRIWKSGNDLVFNHTRTKFQTTVE 72

Query: 125 QNINQTISQIQDFFKEQIDGGTLRSNPSTSKKTGSHLSHEEWKNPPLNSWKLNTDAAWFD 184
             +N T   + +    +   G   ++PS + K         W  P  +  K N DA+  +
Sbjct: 73  MALNDTKEWLDNTMTNEQQNGNRNADPSRNTK---------WSPPGRDKLKCNYDASHHE 132

Query: 185 EIGMGGIKWVLRDSVGSPISFGLKKIDQKINMKSLE-AMAIW 215
              + G+ W+LR+S G+ I  G+ K   ++  +  E +  IW
Sbjct: 133 RNTVSGLGWILRNSQGTVIECGMGKFQGRMTTEEAECSTLIW 165

BLAST of Spg021273 vs. TAIR 10
Match: AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.4e-05
Identity = 27/134 (20.15%), Postives = 60/134 (44.78%), Query Frame = 0

Query: 4   WKILNDIIPNKANIKKKGIDFNSTCSLCGKKNENTSHLIWECKFSRGIWRNLILKSLTMF 63
           W +  + +  +  ++  G+   + C LC   +++ +HL +EC+FS  +WR       T  
Sbjct: 147 WVVAWNRLHTRDRLQNWGLSIPAECLLCNAHDDSRAHLFFECQFSGVVWR-----FFTAS 206

Query: 64  NLCRERWQPMDYWQWLVENTENGDLDRVVII-----MWCIWNSRNRRISGQHFLDQNINQ 123
                  Q MD   WL+  +   ++  ++ +     ++ IW  RN+R+     + ++   
Sbjct: 207 TNLNPPAQLMDCLNWLLSPSREKNICLIIRLAFHSCVYAIWRERNQRLHSG--VSRSTES 266

Query: 124 TISQIQDFFKEQID 133
            +  IQ   + ++D
Sbjct: 267 ILKDIQLIIRARLD 273

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022154990.12.4e-2335.18uncharacterized protein LOC111022134 isoform X1 [Momordica charantia][more]
XP_022143317.19.8e-1734.68uncharacterized protein LOC111013216 [Momordica charantia][more]
KAF4350693.11.3e-1624.14hypothetical protein F8388_003414 [Cannabis sativa][more]
KAF4380543.11.3e-1624.14hypothetical protein G4B88_027634 [Cannabis sativa][more]
XP_030487056.11.3e-1625.22uncharacterized protein LOC115703971 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DL641.2e-2335.18uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A803QCG66.6e-1931.96Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A6J1CQG04.7e-1734.68uncharacterized protein LOC111013216 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A7J6DX206.2e-1724.14Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_003414 PE=4 SV=1[more]
A0A7J6GC456.2e-1724.14CCHC-type domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_027634 P... [more]
Match NameE-valueIdentityDescription
AT3G09510.14.5e-1222.52Ribonuclease H-like superfamily protein [more]
AT5G65005.13.7e-0623.46Polynucleotidyl transferase, ribonuclease H-like superfamily protein [more]
AT4G04650.12.4e-0520.15RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 2..52
e-value: 4.5E-11
score: 43.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 133..154
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 12..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021273.1Spg021273.1mRNA