Spg021252 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021252
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	F-box protein
Location	scaffold6: 47986743 .. 47989661 (-)
RNA-Seq Expression	Spg021252
Synteny	Spg021252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAAATTTTTATAGAATTATAAACCAACGCTTGTAAATTGACAAAGCCAATGAAATAAAAAAGATGAAATAAAGCATTGAATGAAGAAAAACTTTATGTTAAATGCTAATTTCCCTCCAAAATTGCATAAAGTATATTTTGGTTTTCCCTCCTACCCCTCAATTATTTTAAATTAATTAGAAAAAAAAATTCATTCCCACCAAAAAAAAAAAAAAAATCCCACACTTTCTATATCCGAGTCTGACTGAGCAACGCAATCACCGCCATTTCTCATGGCCCACGTGGGCCCACTCTTCCACGTCGCATACGCCACAGCCAATAAAGTTCCAACACGTGTCCTTTCCATTACCTGCAAAACTGTGGCTCAGCGAAAAAAAAAAAAAAAAAAAAAAATTTGGCGGGCACTTTCGTGAAATTCAAATAAAGATCAAACCCTAGCCCCTCTTTCTCTTCTCGTCCTCACTTTGATTTCCCTCCCTTGTTCTCTCTCTCTCTCGTTCTGCGAATTTCGAGGAATTTATCCTAAAATCTCTCGATTCACAGGTTTGTTTTGATTCCATTCATTCCCTTTCTAACTCTGCTTCGTTTACGTTTCATTTTCGATTCTTGCTGCGTTTCTTGGGTGGTTTTGGTTTGTAATAGCTTTGTTGTTTGAGGGTTTTGGGGTTTTGAGCTTGTTTTCGAGGTGGGTTTTTCTTTTTTTCCTCCGTTCTTGGCGTTTCCGATGAATTTCATTTGTAGTTTCAATGTTCAAGAATTCATTTTATGCGATGGTTGATGAAATGGGAAGCGTTTGAATTTTGTGTGGCAGGGTTCTGTTGATGGGTTGTTTTTAATTATTGATGTTGAGGGTTCGTTGGAGTTGTGGAAAAAGGCGTTTGGTTTGGGGTTACTGTGAATGGGGAAAGTGAGTGAAGGGATGGGGAAGGTGTTTTCGAATGATAGGGAGTCGAAGAAATTGAAGAGGAGAAGAAGGTCGAAGGGCTCTGGTGGGAAGTATTTGAAGCCTGGTGCTCTGGCGCAGCTGCGGTGCAGTAAGGGCTCTGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACTAAGAGGAATGTGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCGCCTGTGAAATTGATGATGCATATAAACCATATTGGTACTCCAAGAACTCCTCGGGTTGAAGATTGTGAATCAGAGTCACGACTGGAATCTCTGCCTATGGATCTACTGGTATTGTTACTATACATCTTATTATTCTTTTCTGCTTCCTAGAAGAAAACGTGTTTATCTTGAAGCTGAATCAAATGCATAAAATCGAATATTTTCTGTTTTCTTTTCCAATTATATGGATCTTCTTTAGGTTGCTTTGTTTTTAAGCCACGAGGGAAGCCTGCTTATAGAGATCCCCATACTAGCCTATTATCTGAGCTGTCACTTATGAAATGTTTGTTCATTTTCGCTGGTTTTGTTCTAGTGTCTAGCGGATGTTTCTTGTCTTAAAGAGCAAAGTCGAAATAAATTTCTTGTGAGCCTTTTCATTTTGTGAAGATGATACAAGGCAGGAGTAGACAAGACTTACTTTTTGTAAAAAATCAATTTTTTTTTTTGCTCACGGATTATGGTAGTCAGCAACTTTAGCTGAAACTCTAGTTGTTACTTTCTAAATTATCAACTTAGAAAACCCAAGTTCTTTTGAACTTTTAAGGACCTTTTTCACTACGCATAGATATTTGATGCACTCATGTTGATCTAGAGATGTGCTGAAACCCATGTCTGTACTTTTTGAACAAGAACTTCTTAAATGTGCATTGTTAATGGATACTAATTTTGTGTGCTGTTTGGCTGCTGACCTCATGTTTTCAATTTATTACTTCAAGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAAGCTGTAAGTCTTTGTCTCTATCTGCTTGAAATGCAGCACAGTTTTTGGAGGCTTAATGACCCTTTTTAAACAGGTTTTGCTGGCAAGGCAATTCCACTTTAATTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAGAACAACCACCCCTCGACCCACTGAACACTGGCCCTTTGTAAGGTTAGTATTTTTCATGTTTATTTAAACCGTTACTTTTATTTGTTCAGTCTTTCATCCTATTGATTTAATTGCCAATCTGAGCATAACTCAATTGGTTAAGCATATGCCTTTGACCAAGAAGTAAGACGTTTGATTCACGTGACTCACATCTGGTTGAACTAAAAAGAATCGTATTGATCTGTCTTGAAATAATGATCTACAGCAAGGGAGATGGCAAAGGCTTGTCATTGCCAAGCCCTCACACTCCCAAAGCTCCAAGACATGGGCCTCGTCCGCCATCCCGACTCAAAGTTTCCGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCCTTTCCTCCAAGATGCATGGTTCCATCTGTTCTACCTAAACCTCTCTGCAAATCCTTGGCTTCAAACCGGGTTCTGTTTTACGAGGACGAGTTGTGCCAAGCCGTTGCCCAAAACAAGCTTCGTTGATTGAGATGTAGTTGGCAATTTCTCGTTGTCTGCTGTTTGCTGTATATAGGTTTTTCTCCTTTTTTTTTGCCCGTAGCTGGTTCAGCCAATATAGGAATTCTACAAATTTTGTAGCTGCATTTGATGCAGATTTAGGTATCATGGAATTGAACTTCTTGTTCTGTTGGAATGAGGGTTGAAAGGATTCAGACTGTAGCTGTGGGAATAATCTATTCCAAACTGGTTACTTGTATAGTTCTATATATATATATTCTAAAGAGTGGTTTTCTGCTTGTTT

mRNA sequence

ATGGGGAAAGTGAGTGAAGGGATGGGGAAGGTGTTTTCGAATGATAGGGAGTCGAAGAAATTGAAGAGGAGAAGAAGGTCGAAGGGCTCTGGTGGGAAGTATTTGAAGCCTGGTGCTCTGGCGCAGCTGCGGTGCAGTAAGGGCTCTGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACTAAGAGGAATGTGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCGCCTGTGAAATTGATGATGCATATAAACCATATTGGTACTCCAAGAACTCCTCGGGTTGAAGATTGTGAATCAGAGTCACGACTGGAATCTCTGCCTATGGATCTACTGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAAGCTGTTTTGCTGGCAAGGCAATTCCACTTTAATTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAGAACAACCACCCCTCGACCCACTGAACACTGGCCCTTTGTAAGCAAGGGAGATGGCAAAGGCTTGTCATTGCCAAGCCCTCACACTCCCAAAGCTCCAAGACATGGGCCTCGTCCGCCATCCCGACTCAAAGTTTCCGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCCTTTCCTCCAAGATGCATGGTTCCATCTGTTCTACCTAAACCTCTCTGCAAATCCTTGGCTTCAAACCGGGTTCTGTTTTACGAGGACGAGTTGTGCCAAGCCGTTGCCCAAAACAAGCTTCGTTGA

Coding sequence (CDS)

ATGGGGAAAGTGAGTGAAGGGATGGGGAAGGTGTTTTCGAATGATAGGGAGTCGAAGAAATTGAAGAGGAGAAGAAGGTCGAAGGGCTCTGGTGGGAAGTATTTGAAGCCTGGTGCTCTGGCGCAGCTGCGGTGCAGTAAGGGCTCTGTTGCTAAATCTTGTACTGATCTTGGGAGGAAGAGGGTGGCTGTGTTGGATGCTGGGAAGACTAAGAGGAATGTGGTGCTTGAGGATAAGGTTTCTGATAGAAGTCCTTTGATGTTGTCGCCTGTGAAATTGATGATGCATATAAACCATATTGGTACTCCAAGAACTCCTCGGGTTGAAGATTGTGAATCAGAGTCACGACTGGAATCTCTGCCTATGGATCTACTGGTGAAAGTACTTTGCCATTTACACCACGACCAACTGAGGGCTGTATTCCATGTCTCTCAACGGATCAGAAAAGCTGTTTTGCTGGCAAGGCAATTCCACTTTAATTACACAACTCCAGATCGATCCAGACAGGAGATGTTGAGAACAACCACCCCTCGACCCACTGAACACTGGCCCTTTGTAAGCAAGGGAGATGGCAAAGGCTTGTCATTGCCAAGCCCTCACACTCCCAAAGCTCCAAGACATGGGCCTCGTCCGCCATCCCGACTCAAAGTTTCCGAGATGAGGCAGGTTGCTGCTGTTCTCTTTCAAGAATCAGCCTTTCCTCCAAGATGCATGGTTCCATCTGTTCTACCTAAACCTCTCTGCAAATCCTTGGCTTCAAACCGGGTTCTGTTTTACGAGGACGAGTTGTGCCAAGCCGTTGCCCAAAACAAGCTTCGTTGA

Protein sequence

MGKVSEGMGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDAGKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVSKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR

Homology

[Close]

BLAST of Spg021252 vs. NCBI nr
Match: XP_004146154.1 (F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g35930 [Cucumis sativus] >KGN55645.1 hypothetical protein Csa_011427 [Cucumis sativus])

HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141
Identity = 255/266 (95.86%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVF+NDRE KKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GKTKRNVVLEDKVSDRSPLMLSPVKL+MHINHIGTP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKLR 274
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Spg021252 vs. NCBI nr
Match: XP_038903596.1 (F-box protein At4g35930 [Benincasa hispida])

HSP 1 Score: 510.4 bits (1313), Expect = 9.8e-141
Identity = 255/266 (95.86%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVF++DRE KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTSDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GKTKRNVVLEDKVSDRSPLMLSPVKL+MHI+HI TPRTPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHISHISTPRTPRVEDCESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVN 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KG+GKGL LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVL KPL
Sbjct: 181 KGEGKGLLLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLSKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKLR 274
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Spg021252 vs. NCBI nr
Match: XP_008448525.1 (PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [Cucumis melo var. makuwa] >TYK11403.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 254/266 (95.49%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVF+NDRE KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GK KRN VLEDKVSDRSPLMLSPVKL+MHINHIGTP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKLR 274
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Spg021252 vs. NCBI nr
Match: XP_022145262.1 (F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g35930 [Momordica charantia])

HSP 1 Score: 503.8 bits (1296), Expect = 9.1e-139
Identity = 250/265 (94.34%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVFSNDR+SKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GKTKRN V EDKVSD+SP+MLSPVKL+MHINHIGTPRTPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFVS
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKGL +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKL 273
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKL 265

[Close]

BLAST of Spg021252 vs. NCBI nr
Match: XP_022943859.1 (F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027800.1 F-box protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 1.7e-137
Identity = 251/274 (91.61%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRK 60
           MGKV EGMG+ FSN+RESKKLKRRRR+KGS GKYLKPGAL++LRCSKGSV KSCT LGRK
Sbjct: 1   MGKVKEGMGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKR-NVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDAGKTKR N  LEDKVSDRSPLMLSPVKL+MHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMV 240
           TEHWPFVSKGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMV 240

Query: 241 PSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR 274
           PSV+PKPLCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Spg021252 vs. ExPASy Swiss-Prot
Match: Q5XF11 (F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 4.6e-77
Identity = 168/321 (52.34%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKV   D +SK   R+++ K S  KYLKPGAL QL  SK S AKSC +LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 68  ------GK-----------------------------------TKRNVVLEDKVSD---- 127
                 GK                                    KR+ ++     D    
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 128 -------RSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHD 187
                  +SPLMLSP+ ++M    + TP+TP+ + C SES+LESLPMDLLVK++CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 188 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVSKGDGKGLS 247
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 248 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVLPKP-LCKSLAS 273
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSVL +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Spg021252 vs. ExPASy Swiss-Prot
Match: Q8GX77 (F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 4.1e-09
Identity = 27/57 (47.37%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 112 ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 168
           E +SR LE LP+D+LV+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Spg021252 vs. ExPASy Swiss-Prot
Match: O65416 (F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2)

HSP 1 Score: 59.7 bits (143), Expect = 6.0e-08
Identity = 51/168 (30.36%), Postives = 82/168 (48.81%), Query Frame = 0


Query: 3   KVSEGMGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRV 62
           KV E   +     R +  L +R     S  ++   G   +L    GSV +    LGRKR+
Sbjct: 18  KVVEWFSENLFLKRSTMALSKRGFVMTSNARF--HGEEEELELGLGSV-RFTRGLGRKRI 77

Query: 63  AVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESL 122
            +    +    R+ V    VS+  P+  S  +    I  + +           +SRLE L
Sbjct: 78  LISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRSRITIVSS-------SSSEKSRLECL 137

Query: 123 PMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSR 169
           P DLL++V+C + H+ L+++  VS+ IR+A L+A+  HF YTTP ++R
Sbjct: 138 PQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTR 175

[Close]

BLAST of Spg021252 vs. ExPASy Swiss-Prot
Match: Q9S9T6 (F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 104 RTPRVEDCES-ESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 163
           + P  E  ES  S LE+L  D+L++VLCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 164 TPDR 167
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of Spg021252 vs. ExPASy TrEMBL
Match: A0A0A0L111 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.3e-142
Identity = 255/266 (95.86%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVF+NDRE KKLKRRRRSKGSGGKYLKPGALA+LRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAKLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GKTKRNVVLEDKVSDRSPLMLSPVKL+MHINHIGTP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKTKRNVVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKLR 274
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Spg021252 vs. ExPASy TrEMBL
Match: A0A5A7UEK6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.2e-141
Identity = 254/266 (95.49%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVF+NDRE KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GK KRN VLEDKVSDRSPLMLSPVKL+MHINHIGTP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKLR 274
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Spg021252 vs. ExPASy TrEMBL
Match: A0A1S3BKS0 (F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.2e-141
Identity = 254/266 (95.49%), Postives = 260/266 (97.74%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVF+NDRE KKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA
Sbjct: 1   MGKVFTNDREPKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GK KRN VLEDKVSDRSPLMLSPVKL+MHINHIGTP+TPRVEDCESESRLESLPMDLLVK
Sbjct: 61  GKAKRNGVLEDKVSDRSPLMLSPVKLVMHINHIGTPKTPRVEDCESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLR TTPRPTEHWPFV+
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRITTPRPTEHWPFVN 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKLR 274
           CKSLASNRVLFYEDELCQAVAQNKLR
Sbjct: 241 CKSLASNRVLFYEDELCQAVAQNKLR 266

[Close]

BLAST of Spg021252 vs. ExPASy TrEMBL
Match: A0A6J1CW37 (F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.4e-139
Identity = 250/265 (94.34%), Postives = 259/265 (97.74%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKVFSNDR+SKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLD 
Sbjct: 1   MGKVFSNDRDSKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDT 60

Query: 68  GKTKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVK 127
           GKTKRN V EDKVSD+SP+MLSPVKL+MHINHIGTPRTPRVE CESESRLESLPMDLLVK
Sbjct: 61  GKTKRNAVPEDKVSDKSPMMLSPVKLVMHINHIGTPRTPRVEACESESRLESLPMDLLVK 120

Query: 128 VLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVS 187
           +LCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP+EHWPFVS
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPSEHWPFVS 180

Query: 188 KGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVLPKPL 247
           KGDGKGL +PSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSV+ KPL
Sbjct: 181 KGDGKGLLMPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMVPSVISKPL 240

Query: 248 CKSLASNRVLFYEDELCQAVAQNKL 273
           CKSLASNRVLFYE+ELCQAVAQNKL
Sbjct: 241 CKSLASNRVLFYEEELCQAVAQNKL 265

[Close]

BLAST of Spg021252 vs. ExPASy TrEMBL
Match: A0A6J1FVG9 (F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 8.3e-138
Identity = 251/274 (91.61%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 1   MGKVSEGMGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRK 60
           MGKV EGMG+ FSN+RESKKLKRRRR+KGS GKYLKPGAL++LRCSKGSV KSCT LGRK
Sbjct: 1   MGKVKEGMGEAFSNERESKKLKRRRRAKGSSGKYLKPGALSKLRCSKGSVGKSCTYLGRK 60

Query: 61  RVAVLDAGKTKR-NVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLES 120
           RVAVLDAGKTKR N  LEDKVSDRSPLMLSPVKL+MHINHI TPRTPRVE CESESRLES
Sbjct: 61  RVAVLDAGKTKRNNAGLEDKVSDRSPLMLSPVKLVMHINHISTPRTPRVESCESESRLES 120

Query: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRP 180
           LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVL+ARQFHFNYTTPDRSRQEMLRTTTPRP
Sbjct: 121 LPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLMARQFHFNYTTPDRSRQEMLRTTTPRP 180

Query: 181 TEHWPFVSKGDGKGLSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQESAFPPRCMV 240
           TEHWPFVSKGDGKG SLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQE+ FP RCMV
Sbjct: 181 TEHWPFVSKGDGKGFSLPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQETGFPSRCMV 240

Query: 241 PSVLPKPLCKSLASNRVLFYEDELCQAVAQNKLR 274
           PSV+PKPLCKSLASNRVLFYE+ELCQAVAQNKLR
Sbjct: 241 PSVIPKPLCKSLASNRVLFYEEELCQAVAQNKLR 274

[Close]

BLAST of Spg021252 vs. TAIR 10
Match: AT4G35930.1 (F-box family protein )

HSP 1 Score: 289.3 bits (739), Expect = 3.3e-78
Identity = 168/321 (52.34%), Postives = 203/321 (63.24%), Query Frame = 0


Query: 8   MGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRVAVLDA 67
           MGKV   D +SK   R+++ K S  KYLKPGAL QL  SK S AKSC +LG+KRV V D 
Sbjct: 1   MGKVSPKDLDSKTSVRKKKLKSSSNKYLKPGALVQLCYSKASAAKSCNELGKKRVPVFDT 60

Query: 68  ------GK-----------------------------------TKRNVVLEDKVSD---- 127
                 GK                                    KR+ ++     D    
Sbjct: 61  KSCNDLGKKRVPVFDIKHARNNKMAVEQLNSPKSPLMLSPVNVVKRSTLVRPMKFDDLQV 120

Query: 128 -------RSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESLPMDLLVKVLCHLHHD 187
                  +SPLMLSP+ ++M    + TP+TP+ + C SES+LESLPMDLLVK++CHLHHD
Sbjct: 121 ESNNTCKKSPLMLSPMGIVMQNTLLRTPKTPQADPCVSESQLESLPMDLLVKIVCHLHHD 180

Query: 188 QLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSRQEMLRTTTPRPTEHWPFVSKGDGKGLS 247
           QL+AVFHVSQRIR A +LARQ+HFNYTTPDRSRQEMLR  TP P   WPF  +GDG    
Sbjct: 181 QLKAVFHVSQRIRMATILARQYHFNYTTPDRSRQEMLRVMTPVPINRWPF-RRGDGNPTM 240

Query: 248 LPSPHTPKAPRHGPRPPSRLKVSEMRQVAAVLFQ-ESAFPPRCMVPSVLPKP-LCKSLAS 273
           + SPHTPKAP+H PRPPSR K++EM+Q+ AVLFQ ++ FP RC+VPSVL +P L K +A 
Sbjct: 241 VSSPHTPKAPKHAPRPPSRTKLAEMKQITAVLFQDQTPFPSRCIVPSVLQRPTLFKPMAP 300

[Close]

BLAST of Spg021252 vs. TAIR 10
Match: AT1G61340.1 (F-box family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-10
Identity = 27/57 (47.37%), Postives = 45/57 (78.95%), Query Frame = 0


Query: 112 ESESR-LESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 168
           E +SR LE LP+D+LV+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 75  EGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 131

[Close]

BLAST of Spg021252 vs. TAIR 10
Match: AT4G21510.1 (F-box family protein )

HSP 1 Score: 59.7 bits (143), Expect = 4.2e-09
Identity = 51/168 (30.36%), Postives = 82/168 (48.81%), Query Frame = 0


Query: 3   KVSEGMGKVFSNDRESKKLKRRRRSKGSGGKYLKPGALAQLRCSKGSVAKSCTDLGRKRV 62
           KV E   +     R +  L +R     S  ++   G   +L    GSV +    LGRKR+
Sbjct: 18  KVVEWFSENLFLKRSTMALSKRGFVMTSNARF--HGEEEELELGLGSV-RFTRGLGRKRI 77

Query: 63  AVLDAGK--TKRNVVLEDKVSDRSPLMLSPVKLMMHINHIGTPRTPRVEDCESESRLESL 122
            +    +    R+ V    VS+  P+  S  +    I  + +           +SRLE L
Sbjct: 78  LISSCVRESLSRSAVEIPVVSESPPVKSSLKRQRSRITIVSS-------SSSEKSRLECL 137

Query: 123 PMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRSR 169
           P DLL++V+C + H+ L+++  VS+ IR+A L+A+  HF YTTP ++R
Sbjct: 138 PQDLLIRVICGVDHEDLKSLKLVSKSIREASLVAKTLHFAYTTPKKTR 175

[Close]

BLAST of Spg021252 vs. TAIR 10
Match: AT4G05010.1 (F-box family protein )

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-08
Identity = 29/64 (45.31%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 104 RTPRVEDCES-ESRLESLPMDLLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYT 163
           + P  E  ES  S LE+L  D+L++VLCH+ H+ L  +  VS+ IRKAV+ A++ HF+Y+
Sbjct: 50  KRPSHETTESCRSLLETLHQDILIRVLCHVDHEDLATLKRVSKTIRKAVIEAKKSHFDYS 109

Query: 164 TPDR 167
           TP +
Sbjct: 110 TPKK 113

[Close]

BLAST of Spg021252 vs. TAIR 10
Match: AT1G61340.2 (F-box family protein )

HSP 1 Score: 49.7 bits (117), Expect = 4.4e-06
Identity = 18/44 (40.91%), Postives = 35/44 (79.55%), Query Frame = 0


Query: 124 LLVKVLCHLHHDQLRAVFHVSQRIRKAVLLARQFHFNYTTPDRS 168
           ++V+++C + H+ L+ +FHVS+ IR+A ++A+Q HF Y+TP ++
Sbjct: 134 VIVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKT 177

The following BLAST results are available for this feature:

BLAST of Spg021252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146154.1	1.5e-141	95.86	F-box protein At4g35930 [Cucumis sativus] >XP_031738005.1 F-box protein At4g3593...	[more]
XP_038903596.1	9.8e-141	95.86	F-box protein At4g35930 [Benincasa hispida]	[more]
XP_008448525.1	1.3e-140	95.49	PREDICTED: F-box protein At4g35930 [Cucumis melo] >KAA0052947.1 F-box protein [C...	[more]
XP_022145262.1	9.1e-139	94.34	F-box protein At4g35930 [Momordica charantia] >XP_022145263.1 F-box protein At4g...	[more]
XP_022943859.1	1.7e-137	91.61	F-box protein At4g35930 [Cucurbita moschata] >KAG6596254.1 F-box protein, partia...	[more]

BLAST of Spg021252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF11	4.6e-77	52.34	F-box protein At4g35930 OS=Arabidopsis thaliana OX=3702 GN=At4g35930 PE=2 SV=1	[more]
Q8GX77	4.1e-09	47.37	F-box protein At1g61340 OS=Arabidopsis thaliana OX=3702 GN=At1g61340 PE=2 SV=1	[more]
O65416	6.0e-08	30.36	F-box protein SKIP27 OS=Arabidopsis thaliana OX=3702 GN=SKIP27 PE=1 SV=2	[more]
Q9S9T6	1.7e-07	45.31	F-box protein At4g05010 OS=Arabidopsis thaliana OX=3702 GN=At4g05010 PE=2 SV=1	[more]

BLAST of Spg021252 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L111	7.3e-142	95.86	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002650 PE=4 ...	[more]
A0A5A7UEK6	6.2e-141	95.49	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00560 ...	[more]
A0A1S3BKS0	6.2e-141	95.49	F-box protein At4g35930 OS=Cucumis melo OX=3656 GN=LOC103490677 PE=4 SV=1	[more]
A0A6J1CW37	4.4e-139	94.34	F-box protein At4g35930 OS=Momordica charantia OX=3673 GN=LOC111014758 PE=4 SV=1	[more]
A0A6J1FVG9	8.3e-138	91.61	F-box protein At4g35930 OS=Cucurbita moschata OX=3662 GN=LOC111448461 PE=4 SV=1	[more]

BLAST of Spg021252 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35930.1	3.3e-78	52.34	F-box family protein	[more]
AT1G61340.1	2.9e-10	47.37	F-box family protein	[more]
AT4G21510.1	4.2e-09	30.36	F-box family protein	[more]
AT4G05010.1	1.2e-08	45.31	F-box family protein	[more]
AT1G61340.2	4.4e-06	40.91	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..214
None	No IPR available	PANTHER	PTHR34049:SF2	F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 8..273
None	No IPR available	PANTHER	PTHR34049	F-BOX PROTEIN SKIP27	coord: 8..273
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 114..162 score: 8.861604
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 106..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021252.1	Spg021252.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding