Spg021209 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021209
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 45478813 .. 45479969 (+)
RNA-Seq ExpressionSpg021209
SyntenySpg021209
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAAAGGTCTCGAAAGAGAATAAAGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCGTTACCAACGTGATGATGTGAACAAAACAGTGAGAAATCAATGGAAGCAAGATATAGCTAATAAAGGATACAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACTCCAGAGCCGATTTCTTTAAAGAACAAGCAACCGATCGCAAGAAGCATAGCGATTAATCTTGTATGCTCTTCCTTTTCTGTAAGTTTGCATATTTGATTCACAAAGCAATCACATTTATCTTCTTGTCCCAGCAAGGAAGTATCATAATCAATCTAGTGTTTTTTTAGAACTCAAGTACAGTTGTACAACCTATAGAACAGATCCTGTTCAAGTAAGGTAATATAATCAACATAGTTGTCTTCAGCAATAATCTAACCCAACTAGTTTTTTTCAGCAATAATCTAACCCACCTGGCAGGAAAGTATGATAAACTAACCCGTCTAGCGAAAAAATATGAAAATCAACCTAGTTTTTTTCAGCAATAATCTAACGCAACTATTGGCACACACCAAATTCATCTGGACAAGTCAAATTTGAATAGATATAGCAGTAATATTCGGTATAGTATCAAAGTTTTGGAGGTGTAAATGGAAGCTTCCCAAGGTCATTCTATAATAACTTTAGGCCAGACAAGATCATGACAACTTGATGTAACTATAAGTGTTGTAATATTGGAGATAACGTCAAACCCAATAATTTATATTCTGTATATGTATAAAATTTGTTGTTTTGGAAGGATATATAGCTTGACATTTATATCATCATCATGTTTGTGATGACTTAAGATTTGCCTTTCTTGATAGCTCGTCAATCTTTGTGGAAAGCCCAAGGGTTCCAGATCTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTGCAACCAAAGAAAGAGAGAAAAAAGCAGAACCAAAGCCGTGGATCTACCAAGAATGTTAATAATGATGTAAAAAACAGTGGATCGACAAGTAAGAGTGCTAATGATAATATAAAAAGTAGAAGAATAAGACTGTTGACATTTACATGCACTTAA

mRNA sequence

GCAAAGGTCTCGAAAGAGAATAAAGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCGTTACCAACGTGATGATGTGAACAAAACAGTGAGAAATCAATGGAAGCAAGATATAGCTAATAAAGGATACAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACTCCAGAGCCGATTTCTTTAAAGAACAAGCAACCGATCGCAAGAAGCATAGCGATTAATCTTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTTCCAGATCTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTGCAACCAAAGAAAGAGAGAAAAAAGCAGAACCAAAGCCGTGGATCTACCAAGAATGTTAATAATGATGTAAAAAACAGTGGATCGACAAGTAAGAGTGCTAATGATAATATAAAAAGTAGAAGAATAAGACTGTTGACATTTACATGCACTTAA

Coding sequence (CDS)

GCAAAGGTCTCGAAAGAGAATAAAGTGTTGGTGACTGTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCGTTACCAACGTGATGATGTGAACAAAACAGTGAGAAATCAATGGAAGCAAGATATAGCTAATAAAGGATACAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACGGCTTCGAAAGTCTGCACGGTCACCTGCATCTCCATATATCCGAACTCCAGAGCCGATTTCTTTAAAGAACAAGCAACCGATCGCAAGAAGCATAGCGATTAATCTTCTCGTCAATCTTTGTGGAAAGCCCAAGGGTTCCAGATCTACCTCTTGCTTCGGCAACCTGATTCAAAGGTCTTACAAAGCTTTGACAAGTTTGCAACCAAAGAAAGAGAGAAAAAAGCAGAACCAAAGCCGTGGATCTACCAAGAATGTTAATAATGATGTAAAAAACAGTGGATCGACAAGTAAGAGTGCTAATGATAATATAAAAAGTAGAAGAATAAGACTGTTGACATTTACATGCACTTAA

Protein sequence

AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQRLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLLVNLCGKPKGSRSTSCFGNLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTFTCT
Homology
BLAST of Spg021209 vs. NCBI nr
Match: XP_011650375.1 (uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 hypothetical protein Csa_011805 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.3e-72
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLLVNLCGKPKGSRSTSCFGNLIQRS 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLLVNLCGKPKG R TSCFGNLIQRS
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLLVNLCGKPKGPRFTSCFGNLIQRS 121

Query: 121 YKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTFTCT 178
           YKALTS QPKK+R+KQNQS GSTK V N+VKNS S SK+  D +K  RIRLLTFTCT
Sbjct: 122 YKALTSFQPKKDRQKQNQSSGSTKKV-NEVKNSESKSKNTMDKVKGSRIRLLTFTCT 177

BLAST of Spg021209 vs. NCBI nr
Match: XP_008448776.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo])

HSP 1 Score: 282.7 bits (722), Expect = 2.1e-72
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLLVNLCGKPKGSRSTSCFGNLIQRS 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLLVNLCGKPKG R TSCFGNLIQRS
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLLVNLCGKPKGPRFTSCFGNLIQRS 121

Query: 121 YKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTFTCT 178
           YKAL S QPKK+R+KQNQS GSTKNV N+VKNS S SK+  D +K RRIRLLTFTCT
Sbjct: 122 YKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSESKSKNTIDKVKGRRIRLLTFTCT 177

BLAST of Spg021209 vs. NCBI nr
Match: XP_011650374.1 (uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 1.2e-70
Identity = 153/183 (83.61%), Postives = 159/183 (86.89%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINL------LVNLCGKPKGSRSTSCFG 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTF 178
           NLIQRSYKALTS QPKK+R+KQNQS GSTK V N+VKNS S SK+  D +K  RIRLLTF
Sbjct: 122 NLIQRSYKALTSFQPKKDRQKQNQSSGSTKKV-NEVKNSESKSKNTMDKVKGSRIRLLTF 181

BLAST of Spg021209 vs. NCBI nr
Match: XP_008448775.1 (PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 2.0e-70
Identity = 153/183 (83.61%), Postives = 159/183 (86.89%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINL------LVNLCGKPKGSRSTSCFG 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTF 178
           NLIQRSYKAL S QPKK+R+KQNQS GSTKNV N+VKNS S SK+  D +K RRIRLLTF
Sbjct: 122 NLIQRSYKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSESKSKNTIDKVKGRRIRLLTF 181

BLAST of Spg021209 vs. NCBI nr
Match: KAG7030163.1 (hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 122/177 (68.93%), Postives = 135/177 (76.27%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           AKVS+ENKVLV+VY+E+QEPR+AVNR QRDDVNKTVRNQWK++IANKGYNRRTELLKYSQ
Sbjct: 5   AKVSRENKVLVSVYTERQEPRVAVNRVQRDDVNKTVRNQWKKEIANKGYNRRTELLKYSQ 64

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLLVNLCGKPKGSRSTSCFGNLIQRS 120
           RLRKSA+SPASPY+ TPEPIS               LVNL  KPKG+R TSCFGNLIQRS
Sbjct: 65  RLRKSAQSPASPYLPTPEPIS---------------LVNLRAKPKGARFTSCFGNLIQRS 124

Query: 121 YKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTFTCT 178
            KALTS QPK +R+ QNQS GSTKN              ANDN + RRIRLL FTCT
Sbjct: 125 RKALTSFQPKNKRQNQNQSSGSTKN--------------ANDNKRIRRIRLLKFTCT 152

BLAST of Spg021209 vs. ExPASy TrEMBL
Match: A0A1S3BL45 (uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.0e-72
Identity = 153/177 (86.44%), Postives = 159/177 (89.83%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLLVNLCGKPKGSRSTSCFGNLIQRS 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINLLVNLCGKPKG R TSCFGNLIQRS
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLLVNLCGKPKGPRFTSCFGNLIQRS 121

Query: 121 YKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTFTCT 178
           YKAL S QPKK+R+KQNQS GSTKNV N+VKNS S SK+  D +K RRIRLLTFTCT
Sbjct: 122 YKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSESKSKNTIDKVKGRRIRLLTFTCT 177

BLAST of Spg021209 vs. ExPASy TrEMBL
Match: A0A1S3BKH3 (uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490841 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.7e-71
Identity = 153/183 (83.61%), Postives = 159/183 (86.89%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINL------LVNLCGKPKGSRSTSCFG 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIRLLTF 178
           NLIQRSYKAL S QPKK+R+KQNQS GSTKNV N+VKNS S SK+  D +K RRIRLLTF
Sbjct: 122 NLIQRSYKALASFQPKKDRQKQNQSSGSTKNV-NEVKNSESKSKNTIDKVKGRRIRLLTF 181

BLAST of Spg021209 vs. ExPASy TrEMBL
Match: A0A0A0L6R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.1e-65
Identity = 145/176 (82.39%), Postives = 152/176 (86.36%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQRD+VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 2   ATVSKENKVLVTVYSEKQEPRLPVNRYQRDNVNKVVRNQWKQDTANKGYNRRTELLKYSQ 61

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINL------LVNLCGKPKGSRSTSCFG 120
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL      LVNLCGKPKG R TSCFG
Sbjct: 62  RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLVCTSFSLVNLCGKPKGPRFTSCFG 121

Query: 121 NLIQRSYKALTSLQPKKERKKQNQSRGSTKNVNNDVKNSGSTSKSANDNIKSRRIR 171
           NLIQRSYKALTS QPKK+R+KQNQS GSTK V N+VKNS S SK+  D I S++ R
Sbjct: 122 NLIQRSYKALTSFQPKKDRQKQNQSSGSTKKV-NEVKNSESKSKNTMDKIFSQKRR 176

BLAST of Spg021209 vs. ExPASy TrEMBL
Match: A0A5A7TG76 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00700 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 5.8e-39
Identity = 89/97 (91.75%), Postives = 91/97 (93.81%), Query Frame = 0

Query: 1   AKVSKENKVLVTVYSEKQEPRLAVNRYQRDDVNKTVRNQWKQDIANKGYNRRTELLKYSQ 60
           A VSKENKVLVTVYSEKQEPRL VNRYQR +VNK VRNQWKQD ANKGYNRRTELLKYSQ
Sbjct: 272 ATVSKENKVLVTVYSEKQEPRLPVNRYQRANVNKVVRNQWKQDTANKGYNRRTELLKYSQ 331

Query: 61  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLL 98
           RLRKSARSPASPYIRTPEPI LKNKQPIARSIAINL+
Sbjct: 332 RLRKSARSPASPYIRTPEPIPLKNKQPIARSIAINLV 368

BLAST of Spg021209 vs. ExPASy TrEMBL
Match: A0A061GAZ6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015850 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-11
Identity = 61/148 (41.22%), Postives = 89/148 (60.14%), Query Frame = 0

Query: 5   KENKVLVTVYSEKQEPRLAVNRY---QRDDVNKTVRNQW-KQDIANKGYNRRTELLKYSQ 64
           K+  VLVTVY+EK    ++ N     Q   ++ T++ +  K   A KGYNRR ELL YSQ
Sbjct: 27  KDMAVLVTVYAEKPRRSVSSNHQHHRQHHYLHHTIKQELIKHGGAGKGYNRRAELLHYSQ 86

Query: 65  RLRKSARSPASPYIRTPEPISLKNKQPIARSIAINLLVNLCGKPKGSRSTSCFGN---LI 124
           RLR+SARS AS  +++ +P+S  ++Q      A N +V++  KPK SR+ +CF N   LI
Sbjct: 87  RLRESARSAASTALQS-KPVSSNDQQ------ASNKIVSVQRKPKCSRTPACFDNWGILI 146

Query: 125 QRSYKALTSLQPKKERKKQNQSRGSTKN 146
            R  ++LT+LQ KK  KK+     + +N
Sbjct: 147 PRFLRSLTTLQAKKTGKKKQHCGSTARN 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011650375.11.3e-7286.44uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus] >KAE8650041.1 ... [more]
XP_008448776.12.1e-7286.44PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo][more]
XP_011650374.11.2e-7083.61uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus][more]
XP_008448775.12.0e-7083.61PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo][more]
KAG7030163.11.2e-5168.93hypothetical protein SDJN02_08510, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BL451.0e-7286.44uncharacterized protein LOC103490841 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BKH39.7e-7183.61uncharacterized protein LOC103490841 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0L6R02.1e-6582.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017150 PE=4 SV=1[more]
A0A5A7TG765.8e-3991.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A061GAZ63.0e-1141.22Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_015850 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021209.1Spg021209.1mRNA