Spg021132 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg021132
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold6: 46621005 .. 46629068 (+)
RNA-Seq ExpressionSpg021132
SyntenySpg021132
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGCAGGTTTGACCACGAGACTAAATGATATGAACCAAGACATCATTGCTTTACCTCCAGGACCAATCACACGCTCAAGGGCTAAACAACTACAATTGGCCTTTGATTCCCACATACAAACAGTGGTGAACTCAACTAAGGAAGGTCAAGGAGGGGAAACTGAACAAAAGCTCTATATATTATGTCATATGTCGCTACAAGACGAAGACAGAGTTTTTTGTTAGAATATTTTGGGTGTTTATGTTTGGATCAACATTATGACTTTTTTTTGGGTTTATTAGTTATTTTGAGTTATTTTAGAATTTTTAATTTTAATTAAGTAGGTTCGAGGGTAGATTGGTCTTTTTAGCTAAATAGCTAAGCAGACTAGGTTTAAAAGATGATTTAGGCGTTGTGTACAGGGGACAGTTTTTGGAATGGATTTTCTGTCTTCTTGATGAAGGAGCCACATCACTCTCTTTGCAATTCTTGAAACCAGGGTTGCAAGCTTGGACATTTAGGTAGGTCTGATCAACTTGCTTGTGGAGTGTTCAAACCTTGAGTAGGGAACTAGTTCTCCTTACCTCTTGGTCTTTGATCAACAAGGTAATCTCTGTCTAATCCTTCCCTTGGGATTGAAATAAAATAGATTGAGGGTTTTAGCGTTGGTGAATTAAGGGTTCACATACCTAAAGGGTTCTTAATTCCAATTCGCTAGGGTTTTCATATCATTTGGTATCAGAGCTTAGGCTCTAGATTGGGTATATCATTTTTTTTTTTTGTTGAGTCTACTTCTCATAATTAGGGTTCTATTGAGTAATTGCATCTTATGATCGAGTCTTTTGAAACCTTAGTTTTCGATTTCTTATTTGAATTAATTGAGTGTTGATCTTGTTAAAGGAAAATAGAAACCATGGTTGGTTGGTGGTGCAATTGAATTGAAAAAAAAAAAAAAGAGAAGAAAGCTTCTGGAATTCAGAAAAAAAAAAAAAAAAAAGAAAACAAAATCAAGAATCGGTGAAAAAAAAAAAAGAAGACGACTGGAGTTTGAAAAAAAAACATTGTTGAATTGCAGTGGTCAATTAGCCGAAGATTAAAAAAAAAAAAAGCTGGAACTGAAGCGTCTGGAATTGAAGCGTAGGCGTTGGAAGAAAAAATTTGGAATTGAAATTGAAGAAATTGCGGGGGAGTTGATTCGGGAAATTGAATTCCTAAATTTGTGCTGTGATTTCGTGAAGTCAGGCGGTTTAAAAAAAAAAATTTTGAACTTCAGACGGTGGAAGGGAAAAAAAGAAATTGAAAGAAAGAAGATTGAAAATCAAAATCAAGATCTGATTTGATTCGAAAGGAAATCGGGAAAAAGAAAAGCAAGAGAATTATTTTTAAAAAAAAAAAAAGAAAAGAAAGACGACAAGCGGGTGATAGTTTTCGTGAAGTTGGAGTTTTCGTGTGGATTGAATTTGAGTTTTTGTGATTTCATGATTTTTATCAAGTCGCTTATTCATGAAGTTTAATTCATATCCATCCCATATGCGTGGTGTATTATCGATGTGAATGGAAGCAAGCTGGTCAAGCAGGCAGCTCAATTATAATTCATCCCGTATGCGTGTATTAGGTGAATGGAAGCAGGCTGGTCAAGCAGGTAGCTCAATTAAGCAGCTGAAATTTTATAGGTTTTAAGCAGGGTGAAGTTATAAGGAAAATTATAATATATTTTTCATACTGAAGCAAGTGGGAGCAAGTGAATTTTTTTTTTTTTTTTTTTTCAAGATCAAACTCTAAGAATCATTTGAGATTTCGATTTCTAGGGTTCTAAAAGTTAAATCTTGTTAAATTTAGGGTTTGGGTGAATTTGTGTTTCTATTCTTGAATCTTATTTCATTGCTTCCCTACTTTGTTTTTGGTTATTGTCTAGTTGTTTGCTTTTCTTTGTTCATCTTGCATAACTCCTTGAGTCTTGAATCTTTGATACTTGACTCTAATTATCTTATTTTGTTGTTTTCTTATCCTAGTTTGTTGAAATCTTGAACATTAGGTTCTTGGTTTTTTTTATTTTTCTGTTTATTGGTACTCTACTTTTTCTTTGCTTGAGTTTGACACTTTACAATCATTCTTGCTTGGTTTGTTTCTTGTTTGCTTCTTTGATCTTGATTGCAAAGTATTGGCTCATCACTCTATCTTGAGAGAAACACCTTTATGAGGGACAGCTACAATAAAGAGTGTAAACACGAGTGAACTATATCCATCGAGTGAAACACGTGAGGGAGTGAATTGTGAGGTCCATTTTTTTTTTCTTCACTTTTTTTTTCTTTTGCAGTCATGTCAAACCCAGGAAATCAACCTAACAATGGCAATGTGCCACAAGGGGAGGGACAAGAACGACTCTTAGAGCAGATCATGCGAAATGTGGAAACCATGGTCAATGCGAGGTTGGATAGAATAGAACAAAGGCTTCAAGCAAGACAACAAGTTGAGGAGTTTTCAGAGGATGAGGAAGGTCCAGGGCAAGATGAATATGGAATGGACCCTGTTATAGATGAACCTAGAAGAGGAGGGAATCAAGGCCTGAGGGGAAGAGGAGGTTTTCGTAATAGAAGGCCACCTGGTAGAAGAGGAAACTACAATGAGGATCGAGGCTTTGGCAACATTAAAGTTAAATTTCCGAAGTTTCATGGTACATCTGACCCTGAAGACTACTTCCAATGGGAACATGAAGCTGGACACATTTTTCATACCAATAATTTCTCAGAAGAGAAGAAGGTAACCATCTCTGTGACACATTTTAAGAGTTACGCACAAACTTGGTGGGATAAGGTGTGCTCTAAGCGAAGGAGAAACCAAGAGGGTCCCGTAGAAACATGGCTAGAATTAAAAGAGCTCATGAGGAGGCGATTCATACCAAAACACTACTTGAGAGATTGTGCTCAAAGACTTCAAGCTCTACGTCAAGGGAGCAAAGGTGTTGATGATTATTACAAAGAGATGGAAATGTTGATGGAGAGATTAGACATAGATGAGGATGAGGAAACCACCATGGCACGGTTTCTCCATGGTTTAAACATTGATGTGGCAGATCGTGTTGAGTTGCAAATGTATGAGGGAATGGAAGAGTTGGTGCACCTTGCAGTGAAAATTGAAAAACAAATTCAAAGGCGCAAATTGAGGTACGCGTCTAAAAACTTTTCCAACTCATCTTCTACTTGGAAACGAGATGGTAAACCCACAGACCTTAAACTTAAGGCCAAGGTAGGCAGTGACAAACCTAAAGATAAGGGTGAAACTTCATCTAAATCAAAACCAAAGACAGAAGCACCCACAGGCCGAAATAGAGACCTTAAGTGTTGGAAATGTCAAGGGGTGGGACATATCAGTCAGGAGTGCCCTAATAGGAGAACAATGATCATTAGGGAAGGTGAGATCATCACAGATGTGAGTGAGGGAGAGGAAGAAGCTAATGAGTTCCTAAGTGATTGTGAGGGTGAAGAAGAAGTGGAGGATACTAGCCATATATCCTTAGTCACTAGGAGGGCCTTGAGTACATATATGAGGGAGGATGACTTGGAGAATCAAAGAGAGAATCTTTTTCATACGCGTTGCCTTGTACAAACCTTACCTTGTAGTGTAGTGATTGATAGTGGAAGTTGTACAAATGTCGTGAGTTCTAGTTTGGTTTCGCGATTGAGGTTAGATACTACACCACATCCACGACCCTACAAACTACAATGGCTTAATGATTGTGGCGAACTCAAGGTGACTAAGCAAGTGAAGATTCCTTTTGCCATAGGGAGATATAAGGATGAAGTACTATGTGACGTAGTACCTATGCATGCAGGTGACATTCTACTTGGTAGGCCTTGGCAATTTGACCGGAAGGTTCTTTATGATGGTTTTCTTAACCGTTACACTTTCACACATAACGGTAAGAAAACTATACTTGTACCCCTTTCCCCTAAAGAAGTACTTATTGATCAAACAAAGTTAGAAAAAAGAAAAGAAGAGGTTGCAGCAAAAGCAAAAGAAGAAAGCAAAAAAGAAAAGGGAAAAGAAAAAGAAAATGAGAACTTGAAAGAAAATGAGGGATCGAGAGAAAAGCAAAAAGATAGCTCGCGACCTAGAGAAGAAAAAGAGAGAAATTAGTAAGTTGGAGTGATAGATCTGGTGAGGTTAGGAAAGCGATGTTTTCAAAAAGAACCATACTCATGGTTAAATTTAAAGAAGCTTGCTTACTAACCGAGGAACTTGAATCCTCTTTGCCTAGTGCTTTTGTGTCTCTTTTGCAGGAATTCAGAGGAATTTTTCCCGAGGAGTTGCCTAAGGAGTTACCACCCTTGAGAGGCATAGAGCATAAGATTGATTTCATTCCAGGTGCTCAAATTCCAAATCGACCAGCCTATCGAACCAATCCACAAGAGGCTAAAGAGATTCAAAGACAGGTTGATGAGTTACTCACCCAAGGGTATGTACGTGAGAGTTTAAGTCCTTGCAGTGTCCCTGTCTTACTTGTACCTAAGAAAGATGGATCTTGGAGAATGTGTGTCGATTGTAGGGCTATAAATAAAATTACAATTAAGTATAGACACCCTATTCCTAGGTTGGATGACATGCTTGATGAATTATATGGTTGTAGCCTATTTACAAAAATAGATTTAAAATCTGGATACCATCAAATTAGGATGAATGTTGGAGATGAATGGAAAACTGCTTTCAAAACTAAGCATGGTTTATATGAATGGTTGGTTATGCCCTTTGGTTTGACTAATGCACCTAGTACTTTTATGAGACTCATGAACCATGTATTGCGTGACTTTTTAGGAGATTTTGTAGTGGTTTATTTTGATGACATCCTAATATATTCTAAGACACTAGAGGATCATGTCATGCATGTTAGGTGTGTCCTGATTGCACTAAGAAAGGAAAAGCTTTATGCCAATTTTAAAAAATGTAGCTTTTGCATGGAAAAGGTAAACTTCCTAGGATTTATAGTGTCTAAACATGGAGTGGAAGTTGATATTGAAAAGGTTAAAGCTATTAGGGAGTGGCCCACACCTAGGAATGCTAGTGAGATTAGGAGCTTTCATGGGCTAGCTGGTTTCTATAGGAGGTTCATTAGAGACTTCAGTTCCATAGCTGCACCACTTAATGAACTTATAAAGAAAAATGTAAAATTTGAGTGGGGAAAAGCTCAAGAACGTGCTTTCACTGATTTGAAGGATAAGTTATGTAATGCACCTTTACTTGCCTTGCCTAATTTTGAGCTAACATTTGAAATTGAGTGTGATGCCAGTGGAATAGGGATTGGAGCTGTTTTAATGCAGAATCAGAGGCCATTAATGTATTTTAGTGAGAAGCTAACTGGAGCAACCTTGAAGTATCCTACATATGACAAGGAACTTTATGCTTTGGTGAGAGCCCTGCAAACATGGCAGCATTACTTGTGGCCAAAAGAATTCGTCATTCACACAGATCATCAGAGTTTGCAACATTTGAAGGGTCAAACCAAGCTGAATAGAAGACATGCTAAATGGTTAGAGTTCATCGAAACATTTCCCTATGTGATCAAGTACAAGAAAGGTAAAGAAAATGTGGTAGCTGATGCTCTATCTAGGAGGTATGTTTTGCTAAACGCACTTCATACTAAGTTACTTGGCTTCGAACACATTAAAACGTTGTATTCACAGGACACTTATTTTGCACCTATTATTGAATCTCTCATGCACAAACGAGTTGTTCCTGATTATATGATGTTTGATGGCTTCTTGTTTAGGAAGAATAAACTTTGCATTCCTACTTGTTCTATTCGTGAATTATTAGTTAAAGAAGCTCATGGGGGTGGTTTAATGGGACATTTCGGGATCGCTAAGACATATGACATGTTAAATGAACACTTCTATTGGCCTAGAATGAGACATGACGTACATAAGGAGTGTGAGAGATGTATTGCATGTAAGGAAGCTAAGTCTAAGTCAAAACCACATGGGCTTTATTTACCTTTGCCAACTCCTAGTGGGCCGTGGCTAGATATTTCAATGGATTTTGTTCTTGGGTTGCCTCGATCTAAGAAAGGGAGAGATAGCATTTTTGTAGTCGTTGACAGGTTTAGCAAAATGGCACACTTCATTGCATGTAATAAAACTAATGATGCTAAACATGTGGCTGACTTGTTCTTTAAAGATGTGGTTAAATTGCATGGCATTCCTAAGAGTATTGTTAGCGATAGGGATGTAAAATTTTTAAGCCATTTTTGGAGAGTCCTTTGGGGAAAACTTGGTACTAAATTAGTTTACTCCACTACATGTCATCCTCAAACTGATGGACAAACTGAAGTAGTTAATAGGACAATGGTGACTATGCTTAGGGCTATCATAGATAAAAACACCAAAACTTGGGAGGATTGTCTACCATTCATTGAATTTGCATACAATAGGGTTGTCCATAGTGTCACTAAATGTACTCCATTTGAGATTGTTTATGGGTTTAATCCTTTATCACCTATTGACTTGTTACCTTTGCCTTCTAACGAGGTTGTGAATCTTCAAGCTGACAACAAGGCGACAATCATACAAGAGTTACATAAAGAGGTTAAAGAAAGAATTGAAAGGCAAAATTCCAAGGTAGCTGCGAGGATCAACCAACATCGAAAGCCTATGATATTCAAGGAGGGAGATTGGGTTTGGGTCCATCTTCGAAAGGAAAGATTTCCACATCTACGAGATTCCAAGCTAAACCCAAGGGGGGATGGACCTTTCCAAGTGATGAAGTGCAGAATTTGATTCGAGGACGAATCCTTCAAAAGGGGGAGAAGATGATATGAACCAAGACATCATTGCTTTACCTCCAGGACCAATCACACGCTCAAGGGCTAAACAACTACAATTGGCCTTTGATTCCCACATACAAACAGTGGTGAACTCAACTAAGGAAGGTCAAGGAGGGGAAACTGAACAAAAGCTCTATATATTATGTCAAATGTCGCTACAAGACGAAGACAGAGTTTTTTGTTAGAATATTTTGGGTGTTTATGTTTGGATCAACATTATGACTTTTTTTTGGGTTTATTAGTTATTTTGAGTTATTTTAGAATTTTTAATTTTAATTAAGTAGGTTCGAGGGTAGATTGGTCTTTTTAGCTAAATAGCTAAGCAGACTAGGTTTAAAAGATGATTTAGGCGTTGTGTACAGGGGACAGTTTTTGGAATGGATTTTCTGTCTTCTTGATGAAGGAGCCACATCACTCTCTTTGCAATTCTTGAAACCAAGGTTGCAAGCTTGGACATTCAGGTAGGTCTGATCAACTTGCTTGTGGAGTGTTCAAACCTTGAGTAGGGAACTAGTTCTCCTTACCTCTTGGTCTTTGATCAACAAGGTAATCTCTGTCTAATCCTTCCCTTGGGATTGAAATCAAATAGATTGAGGGTTTTAGCGTTGGTGAATTAAGGGTTCACATACCTAAAGGGTTCTTAATTCCAATTCGCTAGGGTTTTCATATCACTAAAAGTTTCGAAGTAGTCAATACCATAGACCTGAGTATACCCTTGAGCAACTAACCGAGCTTTTTAACGATCAATCTCTCCATTAGGCTTGAGTTTTAAACGAAACACCCAGTTGCACCCAATTAACTTTCGATCAAGAGGTAGGGGAACTAAAGACCAAGTTCCATTCTTCAATAAAGCCTGGTACTCAGAATCCATGGCAGCCTTCCACTTGGGATCTTGTAGGGCCAACTTGTAAGATTTGGGTTCGACAGGGATAGGATTTGATGAAAGCAACCAAGCTTTTGGTTTATAGATTCCATCTTTTGACCTGGTGATCATGGAATTAACATTAAGGCTAAGAGGAGGTTGGGGATTAGGGGGCTGAGGTGGGAGGTCTGACGAAGAAGGCTGGGAAACAGAAGAAGGTGGTTGCAAAGGAAGCAGGGGAGATGGTGAAGATGGTTGAGAGGCATGGTTAGGGGAAAGAGAGGATAGAGTAGAAGTATTAGATGATGTGAGGTGTGGGAGGGTGGAGTAATCAGGCTGGGAGATGAGAGGGGTAAGAAAGGAGATGAAGCTTGGGGCAAGGAGTTGGGAGATATGCCATGA

mRNA sequence

ATGGTAGCAGGTTTGACCACGAGACTAAATGATATGAACCAAGACATCATTGCTTTACCTCCAGGACCAATCACACGCTCAAGGGCTAAACAACTACAATTGGCCTTTGATTCCCACATACAAACAGTGGTGAACTCAACTAAGGAAGGTCAAGGAGGGGAAACTGAACAAAAGCTCTATATATTATGTCATATGTCGCTACAAGACGAAGACAGAGTTTTTTGTGAATGGAAGCAGGCTGGTCAAGCAGAGCAGATCATGCGAAATGTGGAAACCATGGTCAATGCGAGGTTGGATAGAATAGAACAAAGGCTTCAAGCAAGACAACAAGTTGAGGAGTTTTCAGAGGATGAGGAAGACATCATTGCTTTACCTCCAGGACCAATCACACGCTCAAGGGCTAAACAACTACAATTGGCCTTTGATTCCCACATACAAACAGTGGTGAACTCAACTAAGGAAGGTCAAGGAGGGGAAACTGAACAAAAGCTCTATATATTATGTCAAATGTCGCTACAAGACGAAGACAGAGTTTTTTGA

Coding sequence (CDS)

ATGGTAGCAGGTTTGACCACGAGACTAAATGATATGAACCAAGACATCATTGCTTTACCTCCAGGACCAATCACACGCTCAAGGGCTAAACAACTACAATTGGCCTTTGATTCCCACATACAAACAGTGGTGAACTCAACTAAGGAAGGTCAAGGAGGGGAAACTGAACAAAAGCTCTATATATTATGTCATATGTCGCTACAAGACGAAGACAGAGTTTTTTGTGAATGGAAGCAGGCTGGTCAAGCAGAGCAGATCATGCGAAATGTGGAAACCATGGTCAATGCGAGGTTGGATAGAATAGAACAAAGGCTTCAAGCAAGACAACAAGTTGAGGAGTTTTCAGAGGATGAGGAAGACATCATTGCTTTACCTCCAGGACCAATCACACGCTCAAGGGCTAAACAACTACAATTGGCCTTTGATTCCCACATACAAACAGTGGTGAACTCAACTAAGGAAGGTCAAGGAGGGGAAACTGAACAAAAGCTCTATATATTATGTCAAATGTCGCTACAAGACGAAGACAGAGTTTTTTGA

Protein sequence

MVAGLTTRLNDMNQDIIALPPGPITRSRAKQLQLAFDSHIQTVVNSTKEGQGGETEQKLYILCHMSLQDEDRVFCEWKQAGQAEQIMRNVETMVNARLDRIEQRLQARQQVEEFSEDEEDIIALPPGPITRSRAKQLQLAFDSHIQTVVNSTKEGQGGETEQKLYILCQMSLQDEDRVF
Homology
BLAST of Spg021132 vs. NCBI nr
Match: XP_022151643.1 (uncharacterized protein LOC111019551 [Momordica charantia])

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-11
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 10  NDMNQDIIALPPGPITRSRAKQLQLAFDSHIQTVVNSTKEGQGGETEQKLYILCHMSLQD 69
           +DMNQD +ALPP PITRSRAKQLQLAF SHIQ VV+ T   Q  +  +KLY  C M+++D
Sbjct: 546 DDMNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGWKKLYSWCQMNIRD 605

Query: 70  ED 72
           ED
Sbjct: 606 ED 607

BLAST of Spg021132 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 75.5 bits (184), Expect = 5.3e-10
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 10  NDMNQDIIALPPGPITRSRAKQLQLAFDSHIQTVVNSTKEGQGGETEQKLYILCHMSL 68
           +DMNQD +ALP GPITRSRAKQLQLAFDSHIQ  V+ST   Q  +   KLY  C M++
Sbjct: 499 DDMNQDALALPSGPITRSRAKQLQLAFDSHIQAXVSSTNGHQEDKDGTKLYSWCQMNI 556

BLAST of Spg021132 vs. ExPASy TrEMBL
Match: A0A6J1DCS9 (uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019551 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.0e-11
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 0

Query: 10  NDMNQDIIALPPGPITRSRAKQLQLAFDSHIQTVVNSTKEGQGGETEQKLYILCHMSLQD 69
           +DMNQD +ALPP PITRSRAKQLQLAF SHIQ VV+ T   Q  +  +KLY  C M+++D
Sbjct: 546 DDMNQDALALPPEPITRSRAKQLQLAFASHIQRVVSPTNGHQEDKGWKKLYSWCQMNIRD 605

Query: 70  ED 72
           ED
Sbjct: 606 ED 607

BLAST of Spg021132 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 2.5e-10
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 10  NDMNQDIIALPPGPITRSRAKQLQLAFDSHIQTVVNSTKEGQGGETEQKLYILCHMSL 68
           +DMNQD +ALP GPITRSRAKQLQLAFDSHIQ  V+ST   Q  +   KLY  C M++
Sbjct: 499 DDMNQDALALPSGPITRSRAKQLQLAFDSHIQAXVSSTNGHQEDKDGTKLYSWCQMNI 556

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151643.16.2e-1162.90uncharacterized protein LOC111019551 [Momordica charantia][more]
XP_022159097.15.3e-1063.79uncharacterized protein LOC111025539 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DCS93.0e-1162.90uncharacterized protein LOC111019551 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1DYV92.5e-1063.79uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg021132.1Spg021132.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding