Spg021115 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021115
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	ULP_PROTEASE domain-containing protein
Location	scaffold9: 877091 .. 877878 (-)
RNA-Seq Expression	Spg021115
Synteny	Spg021115

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCCATATGTAGGGTACGTAAATCTCAATCCTTTCACATAACTTTTATGATTGTGTGATAATGCAATAACTATGTCATTTTAATATGAATCCAACAGGCAACACATGGAAACTCCCACAATATCGCTCGAACATAATTTGGAAACTTATAAAGGTAAATTTACATTGACTATATTCTTAACGTTATCAAGTTTGTCAACTCAAGTATAATGTTTTTCAACTTGTTTTACATGTAGTGCCCCCGTCAATTGGGTTCTGTAGAGTGTGGATATTATGTGCAAAAGTATATTCGAGAAATAGTACACAACTCATCTACGTCTATAAGTAATCTTGTACGTAATCGTATTCAACTCCACTACTTGTATAAGTATCTTTTAATTATTTATAATTCAATTTTCTAAAAGATTCTTATATTTTGTTTATGGTTTTTCTTATGTTTAGTTTAACACGAAAACAGCATATACGCAAGAAGAAATTGACGAGGTTCGGATAGAATGGGCAGGGTTCGTGGGAACATTTGTGTAGGGTTCTTTCTCGATGATGTGAATGATGTAAATGTGATGTGTAAGTACTTGATTTTTTATCTGTTGTAGATTTGTGTAGGATTATTTTTGGATGACCTGTGAATGGACGGATGGTCCCATTGTATGTGTTGTGTAAACTTCTACTGGATGTTGTGCATGATGTATATGAGATAGAAGTGATTATATGTTATATATTTCAGGTTAGTTTTGAATTGTTTAGTAGAGGTCATGCCGAAATTTTCAAAGTTTGATTCCAATTCTAT

mRNA sequence

ATGAATCCAACAGGCAACACATGGAAACTCCCACAATATCGCTCGAACATAATTTGGAAACTTATAAAGTGCCCCCGTCAATTGGGTTCTGTAGAGTGTGGATATTATGTGCAAAAGTATATTCGAGAAATAGTACACAACTCATCTACGTCTATAAGTAATCTTTTTAACACGAAAACAGCATATACGCAAGAAGAAATTGACGAGGTTCGGATAGAATGGGCAGGGTTCGTGGGAACATTTGTGTAG

Coding sequence (CDS)

ATGAATCCAACAGGCAACACATGGAAACTCCCACAATATCGCTCGAACATAATTTGGAAACTTATAAAGTGCCCCCGTCAATTGGGTTCTGTAGAGTGTGGATATTATGTGCAAAAGTATATTCGAGAAATAGTACACAACTCATCTACGTCTATAAGTAATCTTTTTAACACGAAAACAGCATATACGCAAGAAGAAATTGACGAGGTTCGGATAGAATGGGCAGGGTTCGTGGGAACATTTGTGTAG

Protein sequence

MNPTGNTWKLPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDEVRIEWAGFVGTFV

Homology

[Close]

BLAST of Spg021115 vs. NCBI nr
Match: XP_022136076.1 (uncharacterized protein LOC111007859 isoform X1 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 10  LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDE 69
           + +YR+N IWK IKCP Q+GSVECGYYVQKYIREIV N+ST ISN+FNTK AY QEEIDE
Sbjct: 594 IQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 653

Query: 70  VRIEWAGFVGTFV 83
           VRIEWA FVG  V
Sbjct: 654 VRIEWADFVGGLV 666

[Close]

BLAST of Spg021115 vs. NCBI nr
Match: XP_022136079.1 (uncharacterized protein LOC111007859 isoform X3 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 10  LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDE 69
           + +YR+N IWK IKCP Q+GSVECGYYVQKYIREIV N+ST ISN+FNTK AY QEEIDE
Sbjct: 571 IQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 630

Query: 70  VRIEWAGFVGTFV 83
           VRIEWA FVG  V
Sbjct: 631 VRIEWADFVGGLV 643

[Close]

BLAST of Spg021115 vs. NCBI nr
Match: XP_022136077.1 (uncharacterized protein LOC111007859 isoform X2 [Momordica charantia])

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 10  LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDE 69
           + +YR+N IWK IKCP Q+GSVECGYYVQKYIREIV N+ST ISN+FNTK AY QEEIDE
Sbjct: 593 IQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 652

Query: 70  VRIEWAGFVGTFV 83
           VRIEWA FVG  V
Sbjct: 653 VRIEWADFVGGLV 665

[Close]

BLAST of Spg021115 vs. NCBI nr
Match: KAA0065352.1 (uncharacterized protein E6C27_scaffold301G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 57/80 (71.25%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 7   TWK----LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAY 66
           TW+    L +YRS   W+L+KCPRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK AY
Sbjct: 197 TWQAKHDLQRYRSTPKWRLVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAY 256

Query: 67  TQEEIDEVRIEWAGFVGTFV 83
            QEEIDE+R EWA FV  FV
Sbjct: 257 RQEEIDEIRTEWATFVSRFV 276

[Close]

BLAST of Spg021115 vs. NCBI nr
Match: TYK21543.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 118.2 bits (295), Expect = 3.2e-23
Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 7    TWK----LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAY 66
            TW+    L +YRS   W+ +KCPRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK AY
Sbjct: 1450 TWQAKHDLQRYRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAY 1509

Query: 67   TQEEIDEVRIEWAGFVGTFV 83
            +QEEIDE+R EWA FV  FV
Sbjct: 1510 SQEEIDEIRTEWAAFVSRFV 1529

[Close]

BLAST of Spg021115 vs. ExPASy TrEMBL
Match: A0A6J1C398 (uncharacterized protein LOC111007859 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 10  LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDE 69
           + +YR+N IWK IKCP Q+GSVECGYYVQKYIREIV N+ST ISN+FNTK AY QEEIDE
Sbjct: 571 IQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 630

Query: 70  VRIEWAGFVGTFV 83
           VRIEWA FVG  V
Sbjct: 631 VRIEWADFVGGLV 643

[Close]

BLAST of Spg021115 vs. ExPASy TrEMBL
Match: A0A6J1C2H7 (uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 10  LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDE 69
           + +YR+N IWK IKCP Q+GSVECGYYVQKYIREIV N+ST ISN+FNTK AY QEEIDE
Sbjct: 594 IQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 653

Query: 70  VRIEWAGFVGTFV 83
           VRIEWA FVG  V
Sbjct: 654 VRIEWADFVGGLV 666

[Close]

BLAST of Spg021115 vs. ExPASy TrEMBL
Match: A0A6J1C4J7 (uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007859 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.4e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 0


Query: 10  LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAYTQEEIDE 69
           + +YR+N IWK IKCP Q+GSVECGYYVQKYIREIV N+ST ISN+FNTK AY QEEIDE
Sbjct: 593 IQRYRTNTIWKSIKCPCQMGSVECGYYVQKYIREIVQNASTHISNIFNTKNAYQQEEIDE 652

Query: 70  VRIEWAGFVGTFV 83
           VRIEWA FVG  V
Sbjct: 653 VRIEWADFVGGLV 665

[Close]

BLAST of Spg021115 vs. ExPASy TrEMBL
Match: A0A5A7VAM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold301G00250 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 7.0e-24
Identity = 57/80 (71.25%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 7   TWK----LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAY 66
           TW+    L +YRS   W+L+KCPRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK AY
Sbjct: 197 TWQAKHDLQRYRSTPKWRLVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAY 256

Query: 67  TQEEIDEVRIEWAGFVGTFV 83
            QEEIDE+R EWA FV  FV
Sbjct: 257 RQEEIDEIRTEWATFVSRFV 276

[Close]

BLAST of Spg021115 vs. ExPASy TrEMBL
Match: A0A5D3BF14 (ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold92G00020 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = 0


Query: 7   TWK----LPQYRSNIIWKLIKCPRQLGSVECGYYVQKYIREIVHNSSTSISNLFNTKTAY 66
           TW+    L +YRS   W+ +KCPRQL SV CGYYVQKYI EIVHNSSTSI+NLFNTK AY
Sbjct: 726 TWQAKHDLQRYRSTPKWRPVKCPRQLDSVGCGYYVQKYIHEIVHNSSTSITNLFNTKNAY 785

Query: 67  TQEEIDEVRIEWAGFVGTFV 83
           +QEEIDE+R EWA FV  FV
Sbjct: 786 SQEEIDEIRTEWAAFVSRFV 805

The following BLAST results are available for this feature:

BLAST of Spg021115 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136076.1	2.9e-24	76.71	uncharacterized protein LOC111007859 isoform X1 [Momordica charantia]	[more]
XP_022136079.1	2.9e-24	76.71	uncharacterized protein LOC111007859 isoform X3 [Momordica charantia]	[more]
XP_022136077.1	2.9e-24	76.71	uncharacterized protein LOC111007859 isoform X2 [Momordica charantia]	[more]
KAA0065352.1	1.5e-23	71.25	uncharacterized protein E6C27_scaffold301G00250 [Cucumis melo var. makuwa]	[more]
TYK21543.1	3.2e-23	70.00	transposase [Cucumis melo var. makuwa]	[more]

BLAST of Spg021115 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg021115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C398	1.4e-24	76.71	uncharacterized protein LOC111007859 isoform X3 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C2H7	1.4e-24	76.71	uncharacterized protein LOC111007859 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1C4J7	1.4e-24	76.71	uncharacterized protein LOC111007859 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A5A7VAM1	7.0e-24	71.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BF14	1.6e-23	70.00	ULP_PROTEASE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of Spg021115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003653	Ulp1 protease family, C-terminal catalytic domain	PFAM	PF02902	Peptidase_C48	coord: 16..75 e-value: 1.5E-4 score: 21.6
None	No IPR available	GENE3D	1.10.418.20		coord: 6..81 e-value: 2.2E-7 score: 32.6
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 13..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021115.1	Spg021115.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0008234	cysteine-type peptidase activity