Spg021019 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg021019
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold9: 2318201 .. 2321459 (-)
RNA-Seq Expression	Spg021019
Synteny	Spg021019

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGGGAAACCAGGTAGGTGAGGGAGATTTTCGGCCTAAGGCTAATACCCCGGATGCGGATATGGAAGCCCTCAGAGGGAGGGTGAGCGAGATGGGGCAGAGTCTGGCTGAGATTCTGAGTATCTTGAAGCAACTGAATCCCAGCACGAAGTATCAAAAGAGCTTCGTACGAGATCGTGAGAAGGGGAAAGGGATCTTAGATGAGGAAGAGGGGGAAACAAACAGTGCAACCAGCAAGTTGCGCAAACCAAAGGGTGGCAAGGAATTCGAATTGAAGGAGCCAGGGCCGAGCAAATGGGTAGAGCTCAAGGGCACACTTGGAGCTCCAGATGCAACCAGTACAATGGGTTCGGGCTGGAGGGCCGAGGCCGAGGCCGAGGCCAGGAATCGGGAAAGGACTGAACTTGAAACGAGGATCCGCGCCGAGCTGGGGATTAAGTTGAGGGCCGAAGCCGAGGCCGCGGCCAGGGCCAAGGTCGAGGCTGAGGCTGAGGCCAAAGCTAGAGCCAGTATTCCGAAGGATACACAGCCCAGGAATGTAGATAAGGAAAATCTAGAAAATATAATAGGTCAGGTTGATCCACCGTTTGTCGACGAAATCATGCAGGCGGAGGTTCCACATAAGTTTAAGCTACCCACCTTCCCACAGTATGACGGGAAGAAGGACCCGGTTCAACATTTGGATACCTACCGATCTTGGATGGAATTCCATGGCGCTTCCGAGGCCACCAAATGTCGTGCTTTCTCTCTAACTTTGACTGGGATAGCACGACAATGGTACGACAAGTTGCCAAGCAAGTCCATTGGATCATTCAAGGAATTGTCACGTATTTTTGCTACACAATTCTTGGGGGCAAGGGATCGAAGAAAACCACAGTTTAATTTGTTAACTATTAAGCAGCGGCCAGGGGAGAGTCTGAATGGGTACATCACACGTTTCAGCAACGAGGTTGTGCAGGTAGAAGGGTACGATGACGGAGTAGCCCTAACAGCCGTTATTTCGGGGTTGCAGGACGAGATATTGTTTAATTCAGTGGGAGAGGAACAACCACAAACGTACGCCGAGTTCGTTGCTAGAGCACAAAAGTACATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCAGAGAGGGAAGCACAAAAGGTGACTACCACTGATGGGGGCAGAAGGAGAGAAGAAAGAGGCAAGAGGCCGAGGGAGGAGGCCGACCAAGGTCGTCATAGCTACCCCTCTAGCCGAAGCTGAGTAGACCAGGGGGAAGGCCGAGACCGACCAGGTCTAAAGGGTAAGTTTGAAAAGTATACACCCCTTTCCATTCCACCTGACCGTGTTCTGTCAGCAATAAAGCATACAGAATTGGTGAAGCGTCCGGACAGGATGAGAACGGATCCTAGCAAGAGGGATAAGAACAAGTATTGTGCGTTTCATCGGGACCATGGACATAACACACGATATTGCATACAACTCCGAGACGAGATAGAGAGTCTGATCAAAGAAGGATATCTGAAGGAGTTTGTCAAGGGAGAGGAGAGCAGGGGGCCGAGGCCGGCCAGAGAAGATCATAATGGAGGAAATCATGACCCCCCGTTGGAAATCAAAACCATTTTAGGAGGGCCAGCAGGGGGGGAGTCGAATCGAAAGAGGAAGGCAGTGGCCCGAGAAGCAAGGTTTGAGCTTGAAGAGCAAAGAGTGTACTCAGTAAGGGTCTCAAAAGGGTTGCCGCCAGTAGAGTTCACTGAGATAGAGGCCTCCGGTATCCATCAACCTCACAATGACACACTAGTGGTAAGCTTGACGATTGCCAACGCACGGGTTCATCGAGTATTAGTCGATGGCGGAAGCTCAACAGATGTTTTGTCTACAAAAGTGTTTGAGGCAATGAAGTTGGGGCGGGAGCGACTGAGGCCGAGCATGACACCGCTAGTTGGTTTCAGGGGAGAAAAGGTGATGCCAGAGGGGAACATAGAGTTGCCCGTAAGTTTTGGGGAGGGGCCGAATGTGGTGACAAAGATGGTTAACTTTTTTATAGTAGATTGTGTATCTGCCTATAACGCCATTCTCGGGAGGCCAGCGCTGCATGAGCTAAAGGCTGTTGCATCTACCTACCACCAGGTGATGAAGTTCCCAACTGACAATGGGGTAGGAGTAATGCGGGGTGAACAAAAAGCTTCCCGAGAATGTTACTTCACGGCGCTTAGGGAAACAAACAAGCAAGCAAGGCAACCTGGCCCACGGGCAGACGAAGGCCGAGGCCGAGCAGAGGAACATCCTTCGCCAATGGAGCAGTGACTGCTACTCCTTTATCTTTTTATTTTTGTCGCTTTCTGCATACATTGGTTATATTTCTGTTGTTTTCCCAGGATTTGCGTTTATTGATGTATGAAACTCAAATTGAATTCTTGCGTTGTTGCTAATAGAAATCCTTTAGTTGATTTTACTATTGCAGATAGTTTTTAAAAACAAAAAAAAGGCCTTGTAGGAGTGGCAACGCCTATACTCCTAGGGCGCTCGGTGGAGTGGCAATGCCTATACTCCCCGGGCTAATCAATCTATGAAAAGGCCTTGTAGGAGTGGCAACGCCTATACTCCTAGGGTGCTCGGTGGAACGGCAACGTCTGTACTCCCCGAGGTAACAAACTTGCAGGAATGGCTTTGGAGACTTTGGAGGAGTGGCAATGCCTGCACTCCACAGGGCAAACAGCGACCGGTAGAACTTCAAGAAAGGAGTCATACCGGTAGAAGAGGGTGCAGAGACGTTAAAGCTCCATGGCGCAGTAAGTCACATCCCAAGCATCTTTTACTCAAGTATAATTCGTTAAATTTAAATAACACTTGAGTAGGGGGCTGAGGAGAGGGAGATTGTCAAGTAGTTGATAGTCAAAGTTTTGTTTATGAAAAATATCTGAGTGCACCGAGGCCGAGCATGCCGAAGCCGACCTGGCCAACCACACAGGTTTAATTTGTTCATAGTTTCTGATTTCTTTTGTTGCATATGGCTAGTTGGCCTCTGTGTTAGTTTCATTGCAAATATAGAAACTTGTTCATGTGCGGGCTTGAGAATCCTTCGCTTAATCATTATCGTTATATTGTCTAGGATATCGGAATTTTGTGTATTAAAGTTAAGTTATTTACACAGCTATTAGATAGTATCATGGTGGAAGGGTTTGCTCTGCTCCAGTGGCCAAGTTGTGGTCGGCCTCGGCATTTTCCCAAGGCCGACCATGTTCGTTTGTTTCAGCTTAATCTCATTCAG

mRNA sequence

ATGGAGCAGGGAAACCAGGTAGGTGAGGGAGATTTTCGGCCTAAGGCTAATACCCCGGATGCGGATATGGAAGCCCTCAGAGGGAGGGTGAGCGAGATGGGGCAGAGTCTGGCTGAGATTCTGAGTATCTTGAAGCAACTGAATCCCAGCACGAAGTATCAAAAGAGCTTCGTACGAGATCGTGAGAAGGGGAAAGGGATCTTAGATGAGGAAGAGGGGGAAACAAACAGTGCAACCAGCAAGTTGCGCAAACCAAAGGGTGGCAAGGAATTCGAATTGAAGGAGCCAGGGCCGAGCAAATGGGTAGAGCTCAAGGGCACACTTGGAGCTCCAGATGCAACCAGTACAATGGGTTCGGGCTGGAGGGCCGAGGCCGAGGCCGAGGCCAGGAATCGGGAAAGGACTGAACTTGAAACGAGGATCCGCGCCGAGCTGGGGATTAAGTTGAGGGCCGAAGCCGAGGCCGCGGCCAGGGCCAAGGTCGAGGCTGAGGCTGAGGCCAAAGCTAGAGCCAGTATTCCGAAGGATACACAGCCCAGGAATGTAGATAAGGAAAATCTAGAAAATATAATAGCACAAAAGTACATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCAGAGAGGGAAGCACAAAAGGGGGAAGGCCGAGACCGACCAGGTCTAAAGGGTAAGTTTGAAAAGTATACACCCCTTTCCATTCCACCTGACCGTGTTCTGTCAGCAATAAAGCATACAGAATTGGTGAAGCGTCCGGACAGGATGAGAACGGATCCTAGCAAGAGGGATAAGAACAAGTATTGTGCGTTTCATCGGGACCATGGACATAACACACGATATTGCATACAACTCCGAGACGAGATAGAGAGTCTGATCAAAGAAGGATATCTGAAGGAGTTTGTCAAGGGAGAGGAGAGCAGGGGGCCGAGGCCGGCCAGAGAAGATCATAATGGAGGAAATCATGACCCCCCGTTGGAAATCAAAACCATTTTAGGAGGGCCAGCAGGGGGGGAGTCGAATCGAAAGAGGAAGGCAGTGGCCCGAGAAGCAAGGTTTGAGCTTGAAGAGCAAAGAGTGTACTCAGTAAGGGTCTCAAAAGGGTTGCCGCCAGTAGAGTTCACTGAGATAGAGGCCTCCGGATTTGCGTTTATTGATGGCGCTCGGTGGAGTGGCAATGCCTATACTCCCCGGGCTAATCAATCTATGAAAAGGCCTTGTAGGAGTGGCAACGCCTATACTCCTAGGGTGCTCGGTGGAACGGCAACGTCTGTACTCCCCGAGGTAACAAACTTGCAGGAATGGCTTTGGAGACTTTGGAGGAGTGGCAATGCCTGCACTCCACAGGGCAAACAGCGACCGGTAGAACTTCAAGAAAGGAGTCATACCGGTAGAAGAGGGTGCAGAGACGTTAAAGCTCCATGGCGCAATAGTATCATGGTGGAAGGGTTTGCTCTGCTCCAGTGGCCAAGTTGTGGTCGGCCTCGGCATTTTCCCAAGGCCGACCATGTTCGTTTGTTTCAGCTTAATCTCATTCAG

Coding sequence (CDS)

ATGGAGCAGGGAAACCAGGTAGGTGAGGGAGATTTTCGGCCTAAGGCTAATACCCCGGATGCGGATATGGAAGCCCTCAGAGGGAGGGTGAGCGAGATGGGGCAGAGTCTGGCTGAGATTCTGAGTATCTTGAAGCAACTGAATCCCAGCACGAAGTATCAAAAGAGCTTCGTACGAGATCGTGAGAAGGGGAAAGGGATCTTAGATGAGGAAGAGGGGGAAACAAACAGTGCAACCAGCAAGTTGCGCAAACCAAAGGGTGGCAAGGAATTCGAATTGAAGGAGCCAGGGCCGAGCAAATGGGTAGAGCTCAAGGGCACACTTGGAGCTCCAGATGCAACCAGTACAATGGGTTCGGGCTGGAGGGCCGAGGCCGAGGCCGAGGCCAGGAATCGGGAAAGGACTGAACTTGAAACGAGGATCCGCGCCGAGCTGGGGATTAAGTTGAGGGCCGAAGCCGAGGCCGCGGCCAGGGCCAAGGTCGAGGCTGAGGCTGAGGCCAAAGCTAGAGCCAGTATTCCGAAGGATACACAGCCCAGGAATGTAGATAAGGAAAATCTAGAAAATATAATAGCACAAAAGTACATAAACGCGGAGGAGTTAATGAAGTCCAAGCGGGCAGAGAGGGAAGCACAAAAGGGGGAAGGCCGAGACCGACCAGGTCTAAAGGGTAAGTTTGAAAAGTATACACCCCTTTCCATTCCACCTGACCGTGTTCTGTCAGCAATAAAGCATACAGAATTGGTGAAGCGTCCGGACAGGATGAGAACGGATCCTAGCAAGAGGGATAAGAACAAGTATTGTGCGTTTCATCGGGACCATGGACATAACACACGATATTGCATACAACTCCGAGACGAGATAGAGAGTCTGATCAAAGAAGGATATCTGAAGGAGTTTGTCAAGGGAGAGGAGAGCAGGGGGCCGAGGCCGGCCAGAGAAGATCATAATGGAGGAAATCATGACCCCCCGTTGGAAATCAAAACCATTTTAGGAGGGCCAGCAGGGGGGGAGTCGAATCGAAAGAGGAAGGCAGTGGCCCGAGAAGCAAGGTTTGAGCTTGAAGAGCAAAGAGTGTACTCAGTAAGGGTCTCAAAAGGGTTGCCGCCAGTAGAGTTCACTGAGATAGAGGCCTCCGGATTTGCGTTTATTGATGGCGCTCGGTGGAGTGGCAATGCCTATACTCCCCGGGCTAATCAATCTATGAAAAGGCCTTGTAGGAGTGGCAACGCCTATACTCCTAGGGTGCTCGGTGGAACGGCAACGTCTGTACTCCCCGAGGTAACAAACTTGCAGGAATGGCTTTGGAGACTTTGGAGGAGTGGCAATGCCTGCACTCCACAGGGCAAACAGCGACCGGTAGAACTTCAAGAAAGGAGTCATACCGGTAGAAGAGGGTGCAGAGACGTTAAAGCTCCATGGCGCAATAGTATCATGGTGGAAGGGTTTGCTCTGCTCCAGTGGCCAAGTTGTGGTCGGCCTCGGCATTTTCCCAAGGCCGACCATGTTCGTTTGTTTCAGCTTAATCTCATTCAG

Protein sequence

MEQGNQVGEGDFRPKANTPDADMEALRGRVSEMGQSLAEILSILKQLNPSTKYQKSFVRDREKGKGILDEEEGETNSATSKLRKPKGGKEFELKEPGPSKWVELKGTLGAPDATSTMGSGWRAEAEAEARNRERTELETRIRAELGIKLRAEAEAAARAKVEAEAEAKARASIPKDTQPRNVDKENLENIIAQKYINAEELMKSKRAEREAQKGEGRDRPGLKGKFEKYTPLSIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIKEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFELEEQRVYSVRVSKGLPPVEFTEIEASGFAFIDGARWSGNAYTPRANQSMKRPCRSGNAYTPRVLGGTATSVLPEVTNLQEWLWRLWRSGNACTPQGKQRPVELQERSHTGRRGCRDVKAPWRNSIMVEGFALLQWPSCGRPRHFPKADHVRLFQLNLIQ

Homology

[Close]

BLAST of Spg021019 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-29
Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 192 AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLS 251
           AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP +
Sbjct: 344 AQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTT 403

Query: 252 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 311
           +P ++VL  IK   L+K P+RM+   +KR K +YC FHRDHGH T+ C  L++E+E LI+
Sbjct: 404 VPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIR 463

Query: 312 EGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFE 371
            GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRKA  REAR  
Sbjct: 464 RGYLKEYVE-------EPKATQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTS 523

Query: 372 LEEQRVYSVRVSKGLPPVEFTEIEAS 380
            E+  VY    +     +EF+E EA+
Sbjct: 524 REQNEVYHAYTTNRPVTIEFSEDEAT 542

[Close]

BLAST of Spg021019 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 133.3 bits (334), Expect = 6.1e-27
Identity = 84/206 (40.78%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 192 AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLS 251
           AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYT  +
Sbjct: 169 AQRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTT 228

Query: 252 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 311
           +P ++VL  IK+  L+K P+RM    +KR K +YC FH DHGH T+ C  L++E+E LI 
Sbjct: 229 VPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLIL 288

Query: 312 EGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFE 371
            GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRK   REAR  
Sbjct: 289 RGYLKEYVE-------EPKATQNGESDKSPAREIRTIMGGPIERESGRKRKPDVREARAS 348

Query: 372 LEEQRVYSVRVSKGLPPVEFTEIEAS 380
            E+  VY V  +     +EF+E EA+
Sbjct: 349 REQNEVYHVYTTNRPVTIEFSEDEAT 367

[Close]

BLAST of Spg021019 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 132.5 bits (332), Expect = 1.0e-26
Identity = 83/206 (40.29%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 192 AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLS 251
           AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP +
Sbjct: 128 AQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTT 187

Query: 252 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 311
           +P ++VL  IK   L+K P+RM+   +KR K +YC FHRDH H T+    L++E+E LI+
Sbjct: 188 VPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIR 247

Query: 312 EGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFE 371
            GYL+E+V+        P    +      P  EI+TI+GGP   ES RKRKA  REAR  
Sbjct: 248 RGYLQEYVE-------EPKATQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPS 307

Query: 372 LEEQRVYSVRVSKGLPPVEFTEIEAS 380
            E+  VY    +     +EF+E EA+
Sbjct: 308 REQNEVYHAYTTNRSVTIEFSEDEAT 326

[Close]

BLAST of Spg021019 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 128.6 bits (322), Expect = 1.5e-25
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 192 AQKYINAEEL------MKSKRAERE---------AQKGEGRDR----PGLKGKFEKYTPL 251
           AQKY++AEE       ++ KRA+++         + K E +DR      L  KFEKYTP 
Sbjct: 28  AQKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRVVGQKDLPRKFEKYTPT 87

Query: 252 SIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLI 311
           ++P ++VL  IK   L+K P+ M+  P+KR K +YC FHRDHGH T  C  L++E+E LI
Sbjct: 88  TVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLI 147

Query: 312 KEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREAR 352
           ++GYLKE+V   +     P RE+    N  P  EI+TI+GG    ES+RKRKA  REAR
Sbjct: 148 RKGYLKEYV---DDLKATPNREN---DNKSPTREIRTIMGGSTEQESDRKRKASVREAR 200

[Close]

BLAST of Spg021019 vs. NCBI nr
Match: MQM14562.1 (hypothetical protein [Colocasia esculenta])

HSP 1 Score: 127.1 bits (318), Expect = 4.4e-25
Identity = 78/177 (44.07%), Postives = 103/177 (58.19%), Query Frame = 0


Query: 191 IAQKYINAEELMKSKRAEREAQKGE------GRDRPGLKGK-----------FEKYTPLS 250
           IAQ++   EE + + RAE+  Q  +      G DR   KG+           F  YTPL+
Sbjct: 583 IAQRHAACEESLAASRAEQGEQSDKKRPSDNGSDRDRKKGRRNGDSPRRPRPFTNYTPLT 642

Query: 251 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 310
           + P+++L+ I++   V+ P RMR+DP KRD+NKYC FHRDHGH+T  C QL+DEIE LIK
Sbjct: 643 VAPEQILAEIRNEAFVRWPQRMRSDPRKRDQNKYCRFHRDHGHDTAECRQLKDEIEDLIK 702

Query: 311 EGYLKEFVKGEESRGPRPAREDHNGGNHDP-PLEIKTILGG-PAGGESNRKRKAVAR 349
            GYL+ FV+  E R     R      N++P   EI  I GG  AGGES R R+  AR
Sbjct: 703 RGYLRRFVRRNEERPRCRDRTPEQTINNEPNGQEINVIAGGFGAGGESTRSRRDYAR 759

[Close]

BLAST of Spg021019 vs. ExPASy Swiss-Prot
Match: A1S462 (Translation initiation factor IF-2 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) OX=326297 GN=infB PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 5.2e-05
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 124 EAEAEARNRERTELETRIRAELGIKLRAEAEAAARAKVEAEAEAKARASIPKDTQPRNVD 183
           EA A+A  + + E E + +AE   K +A+AEA A+AK EAEA+AKA AS  K+ QP+ V+
Sbjct: 109 EARAQAEAQAKAEAEAKAKAEAEAKAKADAEAKAKAKAEAEAKAKASASAAKE-QPKPVE 168

Query: 184 KENLENIIAQKYINAEELMKSKRAEREAQKGE 216
            E  +   A+     EE  KSK A+ EA   E
Sbjct: 169 SEEAKAEAARLKSQQEEAAKSKAAQEEAAAKE 199

[Close]

BLAST of Spg021019 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 4.9e-30
Identity = 86/206 (41.75%), Postives = 115/206 (55.83%), Query Frame = 0


Query: 192 AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLS 251
           AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP +
Sbjct: 344 AQRYMSAGEFFYSKREPDGKRTDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTT 403

Query: 252 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 311
           +P ++VL  IK   L+K P+RM+   +KR K +YC FHRDHGH T+ C  L++E+E LI+
Sbjct: 404 VPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLIR 463

Query: 312 EGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFE 371
            GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRKA  REAR  
Sbjct: 464 RGYLKEYVE-------EPKATQNGESDKSPAREIRTIMGGPIERESGRKRKADVREARTS 523

Query: 372 LEEQRVYSVRVSKGLPPVEFTEIEAS 380
            E+  VY    +     +EF+E EA+
Sbjct: 524 REQNEVYHAYTTNRPVTIEFSEDEAT 542

[Close]

BLAST of Spg021019 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.9e-27
Identity = 84/206 (40.78%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 192 AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLS 251
           AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYT  +
Sbjct: 169 AQRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRSCQKDPPQKFEKYTSTT 228

Query: 252 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 311
           +P ++VL  IK+  L+K P+RM    +KR K +YC FH DHGH T+ C  L++E+E LI 
Sbjct: 229 VPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLIL 288

Query: 312 EGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFE 371
            GYLKE+V+        P    +   +  P  EI+TI+GGP   ES RKRK   REAR  
Sbjct: 289 RGYLKEYVE-------EPKATQNGESDKSPAREIRTIMGGPIERESGRKRKPDVREARAS 348

Query: 372 LEEQRVYSVRVSKGLPPVEFTEIEAS 380
            E+  VY V  +     +EF+E EA+
Sbjct: 349 REQNEVYHVYTTNRPVTIEFSEDEAT 367

[Close]

BLAST of Spg021019 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.0e-27
Identity = 83/206 (40.29%), Postives = 112/206 (54.37%), Query Frame = 0


Query: 192 AQKYINAEELMKSKR----------AEREAQKGEG-----RDRPGLKG---KFEKYTPLS 251
           AQ+Y++A E   SKR           ER   K +G     RDR   K    KFEKYTP +
Sbjct: 128 AQRYMSAGEFFYSKREPDGKRTDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPTT 187

Query: 252 IPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIK 311
           +P ++VL  IK   L+K P+RM+   +KR K +YC FHRDH H T+    L++E+E LI+
Sbjct: 188 VPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLIR 247

Query: 312 EGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFE 371
            GYL+E+V+        P    +      P  EI+TI+GGP   ES RKRKA  REAR  
Sbjct: 248 RGYLQEYVE-------EPKATQNGESEKSPAREIRTIMGGPIERESARKRKADVREARPS 307

Query: 372 LEEQRVYSVRVSKGLPPVEFTEIEAS 380
            E+  VY    +     +EF+E EA+
Sbjct: 308 REQNEVYHAYTTNRSVTIEFSEDEAT 326

[Close]

BLAST of Spg021019 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.3e-26
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 192 AQKYINAEEL------MKSKRAERE---------AQKGEGRDR----PGLKGKFEKYTPL 251
           AQKY++AEE       ++ KRA+++         + K E +DR      L  KFEKYTP 
Sbjct: 28  AQKYMSAEEFFHLKKELEGKRADQKRERSGEKPLSSKWEKQDRVVGQKDLPRKFEKYTPT 87

Query: 252 SIPPDRVLSAIKHTELVKRPDRMRTDPSKRDKNKYCAFHRDHGHNTRYCIQLRDEIESLI 311
           ++P ++VL  IK   L+K P+ M+  P+KR K +YC FHRDHGH T  C  L++E+E LI
Sbjct: 88  TVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGLI 147

Query: 312 KEGYLKEFVKGEESRGPRPAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREAR 352
           ++GYLKE+V   +     P RE+    N  P  EI+TI+GG    ES+RKRKA  REAR
Sbjct: 148 RKGYLKEYV---DDLKATPNREN---DNKSPTREIRTIMGGSTEQESDRKRKASVREAR 200

[Close]

BLAST of Spg021019 vs. ExPASy TrEMBL
Match: A0A6J1DZB9 (uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024904 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 5.7e-23
Identity = 70/164 (42.68%), Postives = 95/164 (57.93%), Query Frame = 0


Query: 204 SKRAEREAQKGEGRDRPGLKGKFEKYTPLSIPPDRVLSAIKHT---ELVKRPDRMRTDPS 263
           S+   R  + G  R RP     +E+YT  +IP   +L+ I+ +   +L+KRP+++R D  
Sbjct: 174 SRTEYRRLESGPSRSRP-----YERYTSSTIPISEILTNIEESGMEKLLKRPEKLRGDLE 233

Query: 264 KRDKNKYCAFHRDHGHNTRYCIQLRDEIESLIKEGYLKEFV----------KGEESRGPR 323
           KR+K KYC FHRDHGHNT  C +L+ +IE LI++GY K+FV          K E  R   
Sbjct: 234 KRNKEKYCRFHRDHGHNTTSCWELKRQIEDLIQDGYFKKFVGKPRSNSVEKKEERKRSRT 293

Query: 324 PAREDHNGGNHDPPLEIKTILGGPAGGESNRKRKAVAREARFEL 355
           P R +      D P  I TI GGP GG+S  KRK +AREAR E+
Sbjct: 294 PPRRE------DRPAVINTIFGGPNGGQSGNKRKELAREARREV 326

The following BLAST results are available for this feature:

BLAST of Spg021019 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	1.0e-29	41.75	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022142767.1	6.1e-27	40.78	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_022159368.1	1.0e-26	40.29	uncharacterized protein LOC111025785 [Momordica charantia]	[more]
XP_022159192.1	1.5e-25	44.13	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
MQM14562.1	4.4e-25	44.07	hypothetical protein [Colocasia esculenta]	[more]

BLAST of Spg021019 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A1S462	5.2e-05	43.48	Translation initiation factor IF-2 OS=Shewanella amazonensis (strain ATCC BAA-10...	[more]

BLAST of Spg021019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	4.9e-30	41.75	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	2.9e-27	40.78	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DYL6	5.0e-27	40.29	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DZ52	7.3e-26	44.13	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DZB9	5.7e-23	42.68	uncharacterized protein LOC111024904 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]

BLAST of Spg021019 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..134
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg021019.1	Spg021019.1	mRNA