Spg020976 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020976
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold9: 550627 .. 553065 (+)
RNA-Seq ExpressionSpg020976
SyntenySpg020976
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AACTCGCTCCGAGGCAAGCGTGCCGCAACTTCGCAAGCTAGGCCGTCTCACCACGTCGAAAAACGAGCGACAAAACAACCACGTGCAAGCGTCGCCTTGGCAAGCCCACATCTAGGCTCGAGTGGACATCCCACTCTTTCTCCCTACCAGATCGAAGGGCACAAGCATACATCTTTCTTTTCAGGGGCGAGCCCTACCATGGAACCGAGATCGGTCGCAGGTCATCTCGTCTCGCTCGAGGCAAGCACGCCGCAACTTTACAAGCTAGGTCGTTTCACCACGTCGATAAACGAGCAACATAAAAACCACCACAAGCATCGTGTAGGCAAGCCCACCTCTACCACTCGACTCGACACCCCACTCTCTCTCCCAAGCCAGATTGAGGTAAATCTTGTTTCTTGCTCTAAATTTGAATGTTGTCGGGTTAAGTTACGAATTGGGATGATTATATGTCTCTAATAAATGGGTTTCTTAATTGCAAGAAGCTACAGGGGCGTTTTTGTAATTTCATGGGTTAGAAGTGTTGCCCTAAATCCCTATTTTTTATTTTCACGCAGCCACCCCTCCACCTTCCCTTCTTCGTATCCTTGCAGCAGCCACTCCCCTGTTTTTTTTTTCTTTTTTTTTCTCTCTACGTTTTCTCCCTTTTCTCTTGGTCAAGCCGTCAGCCTCCTTCCCCGTGGTTGCCGTGAACGCCAGCAGCCACCATACTTTTCCCTTCCTCTCCTACCGCCAGCAGCACACCACGACGCCGGCGCCGACCTCCTCCGGCGACGTGAGCAACAAGGGCGGCGTGGTAGTGGGTTTTCGGCTAGCAGTACAGCAGGTTCGTGTTTCTTCTCTCTCTTCTTCGTGGCTTGCTGGTTATCATTCCCTCACGCTCGATTTCTCATCCTCGGACCATCTTCCCTCTGTTCTCGTTGTTTTCCAACACTTTCCCTTCAGTTCAGCGGCTTCTAGGCGCGAGTTTCGGTGGCTGTGACTCTGGGTTGCGCAGACAGCATTGTTGGTGGTCGTTTTCTGCAGTTTCCCAGTGTTTTAAGGTGAGTTCTCGCAATGGGTAAGTTAGTTTGAGGCTTATGTGGGTTAGCTCTTGCATTTAAACATTTACCCACTCATAGTTCTGTCCAAGCGTTTTCGTCATAATTGGCAGTTCTGGTAGCGGGTCTTCAAGTCTACGTGTCGTTGAGCATCTCGTGCAGTGGGTAAGTGTCTTGAGCTCGAGTTTCTGTTGGTTTTAGGGTGCTAGAGGTTTACCCATTCATTGTAGCTTCTTTTTCCAACGTTTCCGTGGCATTAGGAATTTTATTTGTCGTTTGGAGCATAATTTAAGGACTTGGGCAGCAAGCTTAGTTTCCGTTTGGGTAAGTTCTTGAAGAGTTAAATCTCTCCTAAATATTAATTAAGTCCTCATTTTCGTGGCTTAGAAGACCCATAAATTTTTAAGTTGTTTTCTCCATTCTAAGGTAGTGGGCTAAAGGCTTGGAGGCTAAGAGCGTTGTCGTTGGGTCAAGCGGCTTATCAATTGAGGTAAGTAGCCATTTGGATTAAAGTTCTAAGTGTTGCCGTGGATTTAACTAAGCATGGTTGGTTCTTCTTTTTTTTTTTGGAAGCATGAAAATAGTTAAGCATGCCTTGGTTAATTGTTGTTTATAAAGTTCGCCTTTATGTAAGTAGCTTCTTGGGCATGAAGTGTTTGGATTCGTTTCATTGTATGCTTCTTAGTGGTGAATTGGAGTTGGCTAAGTTTTTATGGCTTGGTTGAATGTTCCTTGGTTCGTTGTAATGCTTACTTGATTATGGTTAAAGTGTTGTTTACTTGGGCATGACTTAAGTGTTGATATGTTTGTAGAATTTAGTAAGCATGCTTGGAATATTTGATTTATGATTGTTCTGGGATGTGTTCATGTTATGGAGGATGGGTTGAATATTAATTGGAGCTGTGATTTGGAGTTGGGTTGTGATTTCTGACTCGTTTGCGTTATAGAAGTGCATCGTTGTTGTTTCCCGGTGTAGAAAAATTTCGGGTTCCCTGTATGTATGTCGTTATGCTGCCGAATTTTCGGTAGCCTCATAATGGTTTAGGAATCTTATTTACCTTTGAGGAAAGACTTAGAATAGGGACCTTGACTGAAGGTGTTCATATAACACATGTGGAAGCAATTTTAGGATCGGAGGCACTTAACTACATCAATTTTAGAAAATGAAAACATGTTGTCCAAATACCGTAAGGAGAGAGCAGAATTTTTACCAACCTTTTGGAGACCGATTCAACAACTCTCTTTGATTCCTTTGATCACGAACGGTGTGTGGACCACCTCTAGTGTCTTCCCTACTATTCTCCGGGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGAGAATGGGAAGGGAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGAGATGAGTGA

mRNA sequence

AACTCGCTCCGAGGCAAGCGTGCCGCAACTTCGCAAGCTAGGCCGTCTCACCACGTCGAAAAACGAGCGACAAAACAACCACGTGCAAGCGTCGCCTTGGCAAGCCCACATCTAGGCTCGAGTGGACATCCCACTCTTTCTCCCTACCAGATCGAAGGGCACAAGCATACATCTTTCTTTTCAGGGGCGAGCCCTACCATGGAACCGAGATCGGTCGCAGCCGTCAGCCTCCTTCCCCGTGGTTGCCGTGAACGCCAGCAGCCACCATACTTTTCCCTTCCTCTCCTACCGCCAGCAGCACACCACGACGCCGGCGCCGACCTCCTCCGGCGACGTGAGCAACAAGGGCGGCGTGGTAGTGGGTTTTCGGCTAGCAGTACAGCAGTTCAGCGGCTTCTAGGCGCGAGTTTCGGTGGCTGTGACTCTGGGTTGCGCAGACAGCATTGTTGGTGGTCGTTTTCTGCAGTTTCCCAGTGTTTTAAGGTGAGTTCTCGCAATGGTTCTGGTAGCGGGTCTTCAAGTCTACGTGTCGTTGAGCATCTCGTGCAGTGGTGGGCTAAAGGCTTGGAGGCTAAGAGCGTTGTCGTTGGGTCAAGCGGCTTATCAATTGAGAACGACTTGTGGGAGTCTATAGAGATAGAGAATGGGAAGGGAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGAGATGAGTGA

Coding sequence (CDS)

AACTCGCTCCGAGGCAAGCGTGCCGCAACTTCGCAAGCTAGGCCGTCTCACCACGTCGAAAAACGAGCGACAAAACAACCACGTGCAAGCGTCGCCTTGGCAAGCCCACATCTAGGCTCGAGTGGACATCCCACTCTTTCTCCCTACCAGATCGAAGGGCACAAGCATACATCTTTCTTTTCAGGGGCGAGCCCTACCATGGAACCGAGATCGGTCGCAGCCGTCAGCCTCCTTCCCCGTGGTTGCCGTGAACGCCAGCAGCCACCATACTTTTCCCTTCCTCTCCTACCGCCAGCAGCACACCACGACGCCGGCGCCGACCTCCTCCGGCGACGTGAGCAACAAGGGCGGCGTGGTAGTGGGTTTTCGGCTAGCAGTACAGCAGTTCAGCGGCTTCTAGGCGCGAGTTTCGGTGGCTGTGACTCTGGGTTGCGCAGACAGCATTGTTGGTGGTCGTTTTCTGCAGTTTCCCAGTGTTTTAAGGTGAGTTCTCGCAATGGTTCTGGTAGCGGGTCTTCAAGTCTACGTGTCGTTGAGCATCTCGTGCAGTGGTGGGCTAAAGGCTTGGAGGCTAAGAGCGTTGTCGTTGGGTCAAGCGGCTTATCAATTGAGAACGACTTGTGGGAGTCTATAGAGATAGAGAATGGGAAGGGAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGAGATGAGTGA

Protein sequence

NSLRGKRAATSQARPSHHVEKRATKQPRASVALASPHLGSSGHPTLSPYQIEGHKHTSFFSGASPTMEPRSVAAVSLLPRGCRERQQPPYFSLPLLPPAAHHDAGADLLRRREQQGRRGSGFSASSTAVQRLLGASFGGCDSGLRRQHCWWSFSAVSQCFKVSSRNGSGSGSSSLRVVEHLVQWWAKGLEAKSVVVGSSGLSIENDLWESIEIENGKGMLEGSSTREIYGDE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020976.1Spg020976.1mRNA