Spg020956 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020956
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box/LRR-repeat protein
Locationscaffold9: 2951575 .. 2958017 (-)
RNA-Seq ExpressionSpg020956
SyntenySpg020956
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGGTTGTGGAATTCGGAAGGGGCAGAATCAACAGGTTGACTATGGAAGGGTACAGAATATTGCAATCTTCCCCGCTTTCTCATCCTCGTCGTGTACACTTTCAATGGCTTGTGGAAGAAATGCCTACTCAATCCATTGTCGTTCAGAGTTTGCCGGGGACGTTGATCATATATATATATATTTTTTTGAGTACATCAATATTTGGGATGAGGGGATTTGAATCTCTGACCTCATGGTCGAGGGTACATGCCAATTACCGCTAAGCTAAGCTCGCTTTGGCGGGACGTTGATCATATGGGAGAACCATTTTTTATATTTATTTAATATTTTAGTTTTCGTAATTAGTTTTTCAATTTATTTGCCTAGTAGCCAATAAGAGCTTAGCTCAACTGGCATAAAGTTGTATTGATAACCACGAGATCTGTGGTTCGAATCCCCTTCCCCACATATTATCAAAAAAAAAATAAAAAAATTTATTTGCCACTTAAAGTTAAGTTAGGAACCATTTAGAATGATTTTACAAACCTAAAGGATTAAAGTGGATCTTTTGAAATTTGGGGGACCAAATAGACATTAACCCCAAACCCACAAACCAAAATTGCATTTTACCCTTTATTTTATTTTACTTTTCTTAAAAACCCGTTTTTCAGCGAAGCTTTGCTCGTCTCCCAGACGCTGTTTAACACGCTCTCGCTTCTTGTAGTAGACGAGACCCTCAAAATCTCTCCAGATGCCCTTTCGTTGTCGATCATGAATGACATGGACAGAATCAGCCTTTTATCAGACACTCTTCTTCATCACATTCTCTCCTTCTTAAACATAAAATCAGTTGTCCAGACTTGCGTTCTATCGAAACGCTGGAAGACCCTTTGGACTGATATCCCCACTCTCAACTTTGATTTCGACTCCTACCCATTTGAACAGTCAACCGGAAATGGTCCCTATTCGAAATATTCTTCCATTAAGCGCTTCATCTTCAGGGTTTTTTCAGAACATCGCTGCGAATCCATTAAAAAGTTGAGTTACTCTTCCTCAATCCACACTGAGGAAGCGGTTTTAGTGGTAGAATTGTTGATATGCTATACACGACACCACCCGGTTCAAGAACTTTGTATCAATACCTTCAATACTGTTTATTTCGACTGGCCATTGGATTTACTAGAATGTTCTTCACTGACTGTGCTGAAGATGACATGTGGTTTTCTGGATGACTGGGTCTTCGAAGAGTTGCTTTTACCATTGAGAATTTTAGAGATTGGATATGAATGGGGGGATTGTGATGCAAAATACAGTGTAACTTGGATGTTGTCAGAATGTCCAAGTTTGGAATCTTTGGTTCTAGTTAATTGTCTTTCTGATAATGTTTCTATAGAAGCTCCAGAACTTAAGAATTTTGAACTCTCTCTTTCTTCTTCCCAATGGTACTTAGGGTTTCCAAAAGTTAAATTACTTACACCGAAGCTTAAAAGCGTCAAGTTTTGCAATGTTTTACCCACTGTCACGTCTGATTCAGAATTTTCGTGTATACACGAAGTAAATATAGCAGTTGATGACTCTGATTTTGATGGGGATGGTTCAGCTACGCAAAAGTTGACAGAGGATTTCTCTCAGTTGCTTCAATTGTTTCATAATGCAAGGTCTTTCACACTGCCTTTAAAGGCAATGGAGGTATCTAATATTTATTCTTTCCTTCAATTTATATGCATTTTCCCCCTACATTTTCCTAATTAACTCTGTATCTTATTCGTTTACAAGGTGCTATTGTCAGTTCCTTCTTCTCTTAGTGGATGTTCTTTTCATAATTTGAGATATTTGAAGTTGAAAACAGAGGCAACCAACAAAATAATAAGCTTGCCTATCAGTAGATTGATGAATTCACTAAAATGCCCGAATTTAGAAATGTTGGACTTCGAGGTTGATCCCAACCAGGTAAAACTATGTCGTCTAATCTTTTCTTACGCAAGAGAGGAAATAACATAACTTTCAATATCTATGTTTTAGTTTAACATCATCAACCTTAATTTACCGTAATTACGTAATATACTATGCAGTTTTTGGTTGCTGAATTGCTTGAGGATGTACTTTTACAGTTTGTCTGTTTTGTTTTGTTTTGTGTTTTTGGTTTCCTACTTAGGGTTCTGCAAATTTACTCTTTAGATGACAGAGTTCCCGTCTCTTTGTTTCATTATATATATTTACAAATGAGAATCTGTATCTATATGTTGGATTGAATGCACGTGTACGTTTTGTGATGTTTTCTTCTTCACAATTCTTTTTTCCTTCAATTAATGATTAATCAAGTGTGTGTGTGTGTTTTTAATTTTAATTTTTATTATTCTTATTTTTAATGAAACACACTCGGGAGAGTTTGTGAGTTTAGATCCATGTTCAAGTTGAGTTGTTAAGATTATACATTGAAAACATGAAATTTACCCCTGCAAGAGTTATCATAATCGAGCCTTTCTTCTGCGGTTGAATTCATGATACTTCTCGACCTGAAACATACACATCCATTTGAGTTAATCCCCTTAAACAATGGCAAGTCGAGTTTTTGTATTCCTAGGTCTCTCTCTTGCATTTTCTCTTTTTCTCCCTTTCATTTCTTTGTCATTGTCCTCTTTGATTCCTTGTGCTTTCTCATCATTGCAATCAATCCTTTTAAAATCATTGCCATCATCTTCTCTACGTCTAGATTACAAAGCCACCATAAACCTTACCCGTGGCTAAAAGCCATTGGATTACAAAGGCAATAACAAAAAATAAAAATAGACGAAATAAAGAATTAAAGCTGGCTAATTAAACTGATGGTTTAACAAGTAGTCTCTTTACTTTCTCTACGACTGATCACAAATAATTCTCAATCGCTTCCACCTAAGTATCCATCCTCCTCCCTTTGTGCATGCCCCATGGATGTTGCTCTTATACCAAATGATGGGTCTTTGGCAGGTCCTTATTGTGAATGCATACTCTAGAAAAGGTAAAAACGGAAATTCTCCCCTGACAGTTGGTTACTGGAACATTACTTGTGTTTAGGTGCATCCGTATATGTGGGAGGATAGAGAGTGCGCTATGGGATCATTTTGATTGTAAGTAGTGAAAGAGGATAGTGGGGAGAGATTACCAACACTCTTGGATAAGCTGGGTTTGTTCTTGTTCTTTGATTTTGTCCTGGTGTTTCCATTGTGGCTGTGTTCTTGTTGTGTTTGTGGAAATTTGCTTGATTATCAATATAATAGTAAGGTAGATATCTTACAAAGTGACATCAGAGCACGTTCATCTTGAAGAGATCGGGAAAACAACTCAAAAGAGGTAGGAAGGGAGGAACAACTCAAAAGAGGCAGGAAGGGAGGTTGGAAGATGTAGAGATAGAGTTAAGAGGACATGAATGGAGCGATGCAACAAATGGGCCAGACCCTTGAGTGAATCACAACAGAGTTTAGGCCTTAGGAACAATCGTCACATTGGAGAAGAAACTCAGAGGGTTGTGGCAACTCTCATGTCAGAGTTATCTAGTGGAAAGATACATGTAAGGTTGATGGTAATGGAAGGATCGTCCCTAAAACAGAAACTCTAGAGGAATGGGGGAAATCATTGGGTTTAATAAGGGGGGAAGAAAGGAAAAACCATCAAAGTCACTTGAAGAATTATTGGAAACAATGCACTCCGTTTGGAGCTGAGACTGTCGATTGCTTTTATATTTTTGGCAAGCAAGAAGAATCTAATATGATACTTTTTTTTTTTTGGATAATGACCTGTCTCTTTATGGTAAATCACATACAATATTATTAGACTTTAGGGAGATCACGTTATTCTTTTGCTCTTGAATATAATAGCTCTCGCCACCTGCTGAATTGTGAAATAACAACTTATTTGATATGGGTGCAGCTTGAAATTGGAAGGGTCCTTTTCATTTTCAACTAGTAATGCATCTCCTCTTGTTTAGTAATTAATGCATATATGCTATAATTAATACTGCATCTTTACTTTTCCTCAAGATTTTTTTGACTGTGCTCTCATTCCACTGGAGAATGTGGCAATGGTTTGGATGCTACCATCAAAAGCCTGAATCACCCTTATGTTAGATCTGTTATTAATAATTTTTTTGTTTACACTCTATAGCCTCTTATACAGATCTATCAATCTAGTGCACTCAACTTCATCTCTTGTTACTTTATTCAAATAACAAGACTAAAATGGTTATTGGATAAGTGATAAACTAGAGTATGTCTAAAAAGTATGAAAATTCCGTGAAGACTACTATAAAATTAGAATTATTCTGTATAAGTTTCCATACTAAATCAGTCTTATCACAAAAGAGAGATTTGAGTGTTTAAAGTTTGTGTATTTTATTTTGATATCTCTGAGTGTCTGGGCCAGCTTTTGCACACCTCGTTTAATCTCACGGGACAATTGTTTGACTCTACTACATTTAGTTGTCCGAAACATGTAGGATATTAAATTCTAGGTAGGTGGCCATCATGGATAGAACCTATTCTCTCTAAGCCTTTTTATTTTTTCCATAGCCTTTATTGACCACTAGGCCAATCCACGATGGTTGTTTGAAGTTGTATATTTTACACGAGAATTTGGGGGTGAGATAATTGAAATTAGTCATATAGTTTCTTTTTCAATCACAACTTGATTAAGCTTAAAGTTGAAAGTTTAACAAATTGTGCTAACAACAAATGGATTTCTGATCATTTGGGATGTTTCTATTAGAGTATCAATACAGATATATCATGGTGTTATTAGGATCTTAGTAGTGGCACAATAGAGGGAGTTAGGGGTTTTGGAAGGTTGGCATAATTTTGGCAAATGCTCAATTGGTTAAAACATTATATCCCTAACTAAGAGATTAGAGGTTCGAATTCATACCCCCATATGTTGTTGAACTAAAATATTTTGGGTATTGGTCTATCTTAGGACTTGGGAGAGATAGCATCTACTACAAAGTCTATTGTTATTGTAATAACTCTGTGATATTACAATATAATTACATTTTCGTTATCTTATTAATAATTCTTGGTCCAGCCCATTTTCATAGATTTTATGAGGCTCAAAGTGCTTGCTATCTCCCCCATTCACAAAGAGATTTGGAGTGGTAAATATCCAAGAAAGATGAAATTCTTGTGGTAGCTTAGCTACGAGAGTGTCACAACGAGGTTGTGCAAAGAAGATACCTTTGCAAAATTAATTTCTCAAGAATAGAATACTTGTCTATTCTTTCATAATTTACACTAGTTACAAGGGAATCCTACTTAAGAAGAAGAGGTCTAATACATAAAAGGAAGGAATCACACAAATAAATACAAAATAATTACAACTAATAAAACTAATTAAGAAAAATATCCAACATAAACCAACACTCCCCCTCAAGCTGGTTTGAAGATGTCTTCCGTTGCCATCTTGTCAATCAACTTGTCAAATCGTAGCTTTGGAAGCCCCTTGGTTAGCACATCAACAATTTGTTCCGATGTAGGAAGATAAGGAATGCATATTACTTTGATATCAATCTTCTTCTTTATAAAGTGCTTATCAATTTCAATATGTTTTGTCCTATCATGATGGATTGGATTGTGAGCTATGAAGATGGCTGCCTTATTGTCACAATAAACATGCATAGGCTTCATTTGGACAAATTTCAATTCTTCTGGTAGTCTTTTTATCCAAATACCTTCACAAATGCTATGAGCTAAAACTCTAAATTGTGCTTCGACACTACTTCTAGTTACCACACTTTGTTTTTTACTTTGCCAAGTAACTAGATTCTCTCCAACAAAAGAGCAGTAACTAGATGTAGATCTTCTCTCTGTGGTGCTACCAGCGCAGTTAGCATCAGTGTAAATTTCAACATGTAAGTGGTCATGTTTCTTAAAGAGTATACCTTTTCCTAAAGTACCTTTCAAATATCTCAGGATCCTGTAAACTGCCTCAAAGTGTGTTGGCCCTGGGGAATGCAGGAATTGGCTTATAATACTAACTACAAAAGTAATGTCAGGATGAGTGTGAGATAAGTAAATAAGTCTTCCCACAAGTCTTTGGTAATTCACTGGGTTTTCTCCAACACTTTCAAGGACAATGTTACTTCTATTTTAATTGGGCCATCTTTGGCACCAAACTCCAAACTTTTATGGTGCAATGTTGTCAAAGCTTTGCTATCAGAATTGTGGAGGGAAAGAAACCAAAGGATTTTTCAGAATTCGCATCTCTATTGGTTTGATTGTCTCGATTCAGCTAGTTTAAAGGCGTCTTCATGGTGTTCTCTTTCTAAGCTTTTTGATAATTACTCGATTCAGGACATTTATCTTAATTGGAATGCTTTTATTTCTTATGTATAATTCTTATCTTTACATTTATGTTTGCTTTGCTTTCTTTCACTCCCTTTTGGAGTTTGTATCTTCTGAGCATTAGTCTCTTTTCATTATATCAATGAAAAGT

mRNA sequence

ATGGTGGGTTGTGGAATTCGGAAGGGGCAGAATCAACAGGTTGACTATGGAAGGGTACAGAATATTGCAATCTTCCCCGCTTTCTCATCCTCGTCGTGTACACTTTCAATGGCTTGTGGAAGAAATGCCTACTCAATCCATTGTCGTTCAGACGAAGCTTTGCTCGTCTCCCAGACGCTGTTTAACACGCTCTCGCTTCTTGTAGTAGACGAGACCCTCAAAATCTCTCCAGATGCCCTTTCGTTGTCGATCATGAATGACATGGACAGAATCAGCCTTTTATCAGACACTCTTCTTCATCACATTCTCTCCTTCTTAAACATAAAATCAGTTGTCCAGACTTGCGTTCTATCGAAACGCTGGAAGACCCTTTGGACTGATATCCCCACTCTCAACTTTGATTTCGACTCCTACCCATTTGAACAGTCAACCGGAAATGGTCCCTATTCGAAATATTCTTCCATTAAGCGCTTCATCTTCAGGGTTTTTTCAGAACATCGCTGCGAATCCATTAAAAAGTTGAGTTACTCTTCCTCAATCCACACTGAGGAAGCGGTTTTAGTGGTAGAATTGTTGATATGCTATACACGACACCACCCGGTTCAAGAACTTTGTATCAATACCTTCAATACTGTTTATTTCGACTGGCCATTGGATTTACTAGAATGTTCTTCACTGACTGTGCTGAAGATGACATGTGGTTTTCTGGATGACTGGGTCTTCGAAGAGTTGCTTTTACCATTGAGAATTTTAGAGATTGGATATGAATGGGGGGATTGTGATGCAAAATACAGTGTAACTTGGATGTTGTCAGAATGTCCAAGTTTGGAATCTTTGGTTCTAGTTAATTGTCTTTCTGATAATGTTTCTATAGAAGCTCCAGAACTTAAGAATTTTGAACTCTCTCTTTCTTCTTCCCAATGGTACTTAGGGTTTCCAAAAGTTAAATTACTTACACCGAAGCTTAAAAGCGTCAAGTTTTGCAATGTTTTACCCACTGTCACGTCTGATTCAGAATTTTCGTGTATACACGAAGTAAATATAGCAGTTGATGACTCTGATTTTGATGGGGATGGTTCAGCTACGCAAAAGTTGACAGAGGATTTCTCTCAGTTGCTTCAATTGTTTCATAATGCAAGGTCTTTCACACTGCCTTTAAAGGCAATGGAGTTTTTGGTTGCTGAATTGCTTGAGGATGTACTTTTACAGTGCATCCGTATATGTGGGAGGATAGAGAGTGCGCTATGGGATCATTTTGATTAA

Coding sequence (CDS)

ATGGTGGGTTGTGGAATTCGGAAGGGGCAGAATCAACAGGTTGACTATGGAAGGGTACAGAATATTGCAATCTTCCCCGCTTTCTCATCCTCGTCGTGTACACTTTCAATGGCTTGTGGAAGAAATGCCTACTCAATCCATTGTCGTTCAGACGAAGCTTTGCTCGTCTCCCAGACGCTGTTTAACACGCTCTCGCTTCTTGTAGTAGACGAGACCCTCAAAATCTCTCCAGATGCCCTTTCGTTGTCGATCATGAATGACATGGACAGAATCAGCCTTTTATCAGACACTCTTCTTCATCACATTCTCTCCTTCTTAAACATAAAATCAGTTGTCCAGACTTGCGTTCTATCGAAACGCTGGAAGACCCTTTGGACTGATATCCCCACTCTCAACTTTGATTTCGACTCCTACCCATTTGAACAGTCAACCGGAAATGGTCCCTATTCGAAATATTCTTCCATTAAGCGCTTCATCTTCAGGGTTTTTTCAGAACATCGCTGCGAATCCATTAAAAAGTTGAGTTACTCTTCCTCAATCCACACTGAGGAAGCGGTTTTAGTGGTAGAATTGTTGATATGCTATACACGACACCACCCGGTTCAAGAACTTTGTATCAATACCTTCAATACTGTTTATTTCGACTGGCCATTGGATTTACTAGAATGTTCTTCACTGACTGTGCTGAAGATGACATGTGGTTTTCTGGATGACTGGGTCTTCGAAGAGTTGCTTTTACCATTGAGAATTTTAGAGATTGGATATGAATGGGGGGATTGTGATGCAAAATACAGTGTAACTTGGATGTTGTCAGAATGTCCAAGTTTGGAATCTTTGGTTCTAGTTAATTGTCTTTCTGATAATGTTTCTATAGAAGCTCCAGAACTTAAGAATTTTGAACTCTCTCTTTCTTCTTCCCAATGGTACTTAGGGTTTCCAAAAGTTAAATTACTTACACCGAAGCTTAAAAGCGTCAAGTTTTGCAATGTTTTACCCACTGTCACGTCTGATTCAGAATTTTCGTGTATACACGAAGTAAATATAGCAGTTGATGACTCTGATTTTGATGGGGATGGTTCAGCTACGCAAAAGTTGACAGAGGATTTCTCTCAGTTGCTTCAATTGTTTCATAATGCAAGGTCTTTCACACTGCCTTTAAAGGCAATGGAGTTTTTGGTTGCTGAATTGCTTGAGGATGTACTTTTACAGTGCATCCGTATATGTGGGAGGATAGAGAGTGCGCTATGGGATCATTTTGATTAA

Protein sequence

MVGCGIRKGQNQQVDYGRVQNIAIFPAFSSSSCTLSMACGRNAYSIHCRSDEALLVSQTLFNTLSLLVVDETLKISPDALSLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHHPVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIGYEWGDCDAKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVKLLTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLFHNARSFTLPLKAMEFLVAELLEDVLLQCIRICGRIESALWDHFD
Homology
BLAST of Spg020956 vs. NCBI nr
Match: KAA0039267.1 (F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa])

HSP 1 Score: 297.7 bits (761), Expect = 1.5e-76
Identity = 177/324 (54.63%), Postives = 219/324 (67.59%), Query Frame = 0

Query: 81  SLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPF 140
           +L IM D DRISLL DTLLHHILS  N K VVQTC+LSKRWKTLWT IPTLNFD++S+  
Sbjct: 10  NLRIMKD-DRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSS 69

Query: 141 EQSTG-NGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHH 200
             S   +   SK  S K FIFRV S+H    I+KL+Y+SS + +E+VL VELLICY   H
Sbjct: 70  SSSFNYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVL-VELLICYAGSH 129

Query: 201 PVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGYEWG 260
            VQ+LCINT+N   ++W      CSSL  LKM CGF+DDW    L LP L+ILEI  +W 
Sbjct: 130 NVQQLCINTYNIGIYEWDYCFPICSSLIELKMVCGFVDDW--GVLALPSLKILEIQCDWS 189

Query: 261 DCD--AKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVK 320
             D  A Y    M S CP+LESLVLV+ L ++ +I AP L+NF+L  +S    L FP+V+
Sbjct: 190 ARDERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKL-CASHDMELTFPQVE 249

Query: 321 LLTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLF 380
           LLTP LK+V F NVLP + SDSEFSCI +V+I + DS F  DGS TQ+L   F  LL + 
Sbjct: 250 LLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVL 309

Query: 381 HNARSFTLPLKAMEFLVAELLEDV 401
           HNA SFTLP+KA + ++  L+  V
Sbjct: 310 HNASSFTLPMKATQEVLFPLIGSV 328

BLAST of Spg020956 vs. NCBI nr
Match: XP_008459617.1 (PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo])

HSP 1 Score: 294.7 bits (753), Expect = 1.3e-75
Identity = 173/316 (54.75%), Postives = 215/316 (68.04%), Query Frame = 0

Query: 81  SLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPF 140
           +L IM D DRISLL D+LLHHILS  N K VVQTC+LSKRWKTLWT IPTLNFD++S+  
Sbjct: 10  NLRIMED-DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSS 69

Query: 141 EQSTG-NGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHH 200
             S   +   SK  S K FIFRV S+H    I+KL+Y+SS + +E+VL VELLICY   H
Sbjct: 70  SSSFNYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVL-VELLICYAGSH 129

Query: 201 PVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGYEWG 260
            VQ+LC+NT+N   ++W      CSSL  LKM CGF+DDW    L LP L+ILEI  +W 
Sbjct: 130 NVQQLCVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDW--GVLALPSLKILEIQCDWS 189

Query: 261 DCD--AKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVK 320
             D  A Y    M S CP+LESLVLV+ L ++ +I AP L+NF+L  +S    L FP+V+
Sbjct: 190 ARDERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKL-CASHDMELTFPQVE 249

Query: 321 LLTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLF 380
           LLTP LK+V F NVLP + SDSEFSCI +V+I + DS F  DGS TQ+L   F  LL + 
Sbjct: 250 LLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVL 309

Query: 381 HNARSFTLPLKAMEFL 393
           HNA SFTLP+KA + +
Sbjct: 310 HNASSFTLPMKATQVI 320

BLAST of Spg020956 vs. NCBI nr
Match: XP_038890214.1 (F-box/LRR-repeat protein At3g26922-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 1.1e-74
Identity = 173/318 (54.40%), Postives = 217/318 (68.24%), Query Frame = 0

Query: 89  DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQST--GN 148
           DRISLL D LLHHILS LN K VVQTCVLSKRWKTLWT IPTLNFD++SY    S+   N
Sbjct: 5   DRISLLPDVLLHHILSTLNTKCVVQTCVLSKRWKTLWTHIPTLNFDYNSYSSSLSSFKDN 64

Query: 149 GPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHHPVQELCI 208
              +K  S K FIFRV S+H   +I KL+Y++S + +E VL VE LICY     VQ+LCI
Sbjct: 65  DDEAKEKSFKYFIFRVLSKHCTTNIHKLTYTTSQNEDELVL-VEFLICYAGSRNVQQLCI 124

Query: 209 NTFNTV-YFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGYEW--GDCDA 268
           NT++T+  +DW      CSSL  LKM C F+ DW    L +P L+ILEI  +W   D +A
Sbjct: 125 NTYDTIGIYDWNYCFSVCSSLIGLKMVCAFVHDW--GVLAIPSLKILEIECDWYERDKEA 184

Query: 269 KYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVKLLTPKL 328
            Y    M   CP+LESLVLV+ L ++ +I AP+LKN +L  +S +  L FP+V+L TP L
Sbjct: 185 NYKGITMFPGCPNLESLVLVDYLFESSTISAPKLKNLKL-CASPRMELTFPEVELFTPTL 244

Query: 329 KSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLFHNARSF 388
           ++V F NVLP V SDSEFSCIH+V+I + DS F+  GS TQKL  +F +LL +FHNARSF
Sbjct: 245 ETVNFINVLPIVKSDSEFSCIHKVDIQLKDSIFERVGSQTQKLKSNFRELLSVFHNARSF 304

Query: 389 TLPLKAMEFLVAELLEDV 401
           TLPLKA   LV  L +++
Sbjct: 305 TLPLKAT--LVISLYDEL 316

BLAST of Spg020956 vs. NCBI nr
Match: XP_022141765.1 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [Momordica charantia])

HSP 1 Score: 282.3 bits (721), Expect = 6.7e-72
Identity = 155/273 (56.78%), Postives = 195/273 (71.43%), Query Frame = 0

Query: 88  MDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNG 147
           +DRISLL D+LLH ILS LN + VVQTCVLSKRWKTLWTDIPTLNFDFDSYPF+QS  N 
Sbjct: 11  LDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNS 70

Query: 148 PYS--KYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHHPVQELC 207
             S  K  S +RFI RV SEH C++I  L++S S  +++ V ++E LICY   H VQELC
Sbjct: 71  SASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELC 130

Query: 208 INTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIGYEWGD-CDAKY 267
           I+T+ T+Y++WP  L  CSSL VLK+ CGF+DD    +    LRILEI  +WGD  D KY
Sbjct: 131 ISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALK-SASLRILEIECDWGDRYDRKY 190

Query: 268 SVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVKLLTPKLKS 327
           +   M S CP+LESLVLVN L D+ +I AP+L+N EL  S        P+V+L  P LK+
Sbjct: 191 NEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS-------XPQVELFAPSLKT 250

Query: 328 VKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDG 358
           +KF NVLPT+ S S+F+CIH+VNI V+D +F+G
Sbjct: 251 LKFGNVLPTLKSASKFACIHKVNIQVEDCNFEG 274

BLAST of Spg020956 vs. NCBI nr
Match: XP_022141791.1 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia])

HSP 1 Score: 268.9 bits (686), Expect = 7.6e-68
Identity = 177/373 (47.45%), Postives = 227/373 (60.86%), Query Frame = 0

Query: 22  IAIFPAFSSSSCTLSMACGRNAYSIHCRSDEALLVSQTLFNTLSLLVVDETLKISPDALS 81
           +A+ P  +S    +  +  R  YS+      +  +S  +  TL      ETL++     S
Sbjct: 50  LAVPPTINSVHRHIWSSGIRGVYSVKSGYRYSKRISAAISYTLKF----ETLQLRVPQFS 109

Query: 82  LSIMNDM-----DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFD 141
           + +         DRISLL D LL HILS +N K VVQTCVLSKRWKTLWT IPTLNF+F 
Sbjct: 110 VGLSMSKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFK 169

Query: 142 SYPFEQSTGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYT 201
           SYPFE+ + N   SK SS K FIFR+ SE     I+KLSY+SS + +E VL VELLIC+ 
Sbjct: 170 SYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVL-VELLICFA 229

Query: 202 RHHPVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGY 261
           R H V+EL ++T+    +DW   L  CSSLTVLKM CGF+ DW    L LP LRILEI  
Sbjct: 230 RRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADW--GVLTLPSLRILEIEX 289

Query: 262 EWGDCDAKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKV 321
           E  + DA Y    M S CP+L+SLVL+N L ++ +I AP+L+N  L   +    L F +V
Sbjct: 290 EDCEDDADYKGIRMFSGCPNLKSLVLINYLFESATICAPKLENLVLCSGNE---LVFSEV 349

Query: 322 KL-LTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDF-DGDGSATQKLTEDFSQLL 381
           +L  T  L++V F N+LPTV S  EFSCI +VNI V +  F  G+G   Q     FS+L 
Sbjct: 350 ELTCTSSLRNVTFSNMLPTVNSALEFSCIQKVNIEVHNYQFSSGNGYFCQNKIAAFSELF 409

Query: 382 QLFHNARSFTLPL 387
           ++FHNARSF LPL
Sbjct: 410 RVFHNARSFILPL 412

BLAST of Spg020956 vs. ExPASy Swiss-Prot
Match: Q1PFK0 (F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 7.0e-16
Identity = 82/268 (30.60%), Postives = 123/268 (45.90%), Query Frame = 0

Query: 84  IMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQS 143
           + N MD+IS L D LL  +LSFL+ K  V T +LS RWK+LW  +P L ++F  Y   + 
Sbjct: 48  VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEG 107

Query: 144 TGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYS------SSIHTEEAVLVVELLICYTR 203
            G         + RFI      H+  +I+ LS         SI  ++  L V L +  + 
Sbjct: 108 QG---------LARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSN 167

Query: 204 HHPVQELCINTFNTVYF--DWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIG- 263
              V+EL +  FN        P  L +C S+ +LK+    L D   +  L  L+ L +G 
Sbjct: 168 ---VRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGR 227

Query: 264 YEWGDCDAKYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLG 323
             + D +   S+  +LS CP LE LV+     DN   +S+    L+   L +S      G
Sbjct: 228 VTYSDAN---SLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTLKMSRPCHLDG 287

Query: 324 FPKVKLLTPKLKSVKFCNVLPTVTSDSE 340
              +K+ +P LK +K  +      SD E
Sbjct: 288 ---LKMNSPSLKYLKVIDERLESDSDDE 297

BLAST of Spg020956 vs. ExPASy Swiss-Prot
Match: Q3EAE5 (Putative F-box/FBD/LRR-repeat protein At4g00315 OS=Arabidopsis thaliana OX=3702 GN=At4g00315 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 5.9e-15
Identity = 83/264 (31.44%), Postives = 119/264 (45.08%), Query Frame = 0

Query: 88  MDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNG 147
           MD+ S L D LL  +LSFL  K  V+T +LS RWK+LW  +P L +DF  Y   +  G  
Sbjct: 1   MDKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQG-- 60

Query: 148 PYSKYSSIKRFIFRVFSEHRCESIKKLSYS------SSIHTEEAVLVVELLICYTRHHPV 207
                  + RFI      H+  +I+ LS         SI  E+  L V L +       V
Sbjct: 61  -------LARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAV---HDSNV 120

Query: 208 QELCIN--TFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIG-YEWG 267
           +EL +   TF       P  L +C S+ +LK+    L D   +  L  L+ L +G   + 
Sbjct: 121 RELSLKLCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYS 180

Query: 268 DCDAKYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLGFPKV 327
           D D   S+  +LS CP LE LV+     DN   +S+    L+   L +S      G   +
Sbjct: 181 DED---SLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSCPCHLDG---I 240

Query: 328 KLLTPKLKSVKFCNVLPTVTSDSE 340
            + TP LK +K  +      SD+E
Sbjct: 241 MMNTPSLKYLKVTDERQESDSDNE 246

BLAST of Spg020956 vs. ExPASy Swiss-Prot
Match: Q9LXJ7 (FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana OX=3702 GN=At3g52670 PE=4 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 8.6e-14
Identity = 65/216 (30.09%), Postives = 102/216 (47.22%), Query Frame = 0

Query: 89  DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNGP 148
           DR++ L + L+  ILSFL  + V+ T VLSK+W++LW  +P L FD D Y          
Sbjct: 10  DRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFDSDDYE--------- 69

Query: 149 YSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHHPVQELCINT 208
            S++ +    + + F   +   +K L  S         + + + I + RH  ++EL +  
Sbjct: 70  -SEHYTFSEIVCKSFLSLKAPVLKSLHLSFRKSVNPVDIGLWIGIAFARH--LRELVLYV 129

Query: 209 FNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEI-GYEWGDCDAKYSVT 268
                F +P  L  C++L  LK+  G   D     LL  LR L +    + D   + S+ 
Sbjct: 130 APKQTFTFPSSLCICNTLETLKLILGIHVDIPCPVLLKSLRTLHLDSVSYKD---EESIR 189

Query: 269 WMLSECPSLESLVLVNCLSD--NVSIEAPELKNFEL 302
            +LS CP LE+LV+     +  N  IE P LK  E+
Sbjct: 190 NLLSSCPILENLVVYEYWYNVVNFDIEVPSLKRLEI 210

BLAST of Spg020956 vs. ExPASy Swiss-Prot
Match: Q9FM89 (F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56420 PE=2 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 3.3e-13
Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 0

Query: 89  DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNGP 148
           DR+S L D  L  ILS+L  K V+ T +LSKRW+ LWT +P LN+D   +          
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHD--------- 65

Query: 149 YSKYSSIKRFIFRVFSEHRCESIKKLS--YSSSIHTEEAVLVVELLICYTRHHPVQELCI 208
            +      +F+ R    H+  +++ L+    S   T E  + V + I   R   V+EL +
Sbjct: 66  -NTCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRF--VRELSV 125

Query: 209 N-TFNTVYFDWPLDLLECSSLTVLKMTCGFLDD---WVFEELLLPLRILEIGYEWGDCDA 268
           +          P  L  CS+L VLK+    L+D   +V  + L  L +L++ Y       
Sbjct: 126 SYCSGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYL-----D 185

Query: 269 KYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLGFPKVKLLT 326
             S+  ++S C SLE LV+  C  DN   V++ AP LK   L  SS  +        + T
Sbjct: 186 DQSLPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDT 234

BLAST of Spg020956 vs. ExPASy Swiss-Prot
Match: Q9LXJ6 (F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN=At3g52680 PE=2 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 4.7e-12
Identity = 73/265 (27.55%), Postives = 124/265 (46.79%), Query Frame = 0

Query: 78  DALSLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDS 137
           ++L + ++   DRIS L D LL  ILS L    VV T VLSK+W++LW  +P L FD D 
Sbjct: 10  ESLRIRVVMGKDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDD 69

Query: 138 YPFEQSTGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTR 197
           Y           S++ +    + + F  H+   ++       ++     + + + I ++R
Sbjct: 70  YE----------SEHYTFSEIVCKSFLSHKAPVLESFRL-KFVNFNPVDIGLWVGIAFSR 129

Query: 198 HHPVQELCINTF-----NTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILE 257
           H  ++EL ++ +       V F +P  L  C++L  LK+    L D     L+  LR L 
Sbjct: 130 H--LRELVLDFYPAELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLH 189

Query: 258 IGYEWGDCDAKYSVTWMLSECPSLESLVLVNCLSDNV---SIEAPELKNFELSLSSS--- 317
           +  E+     + SV  +LS CP LE L L      ++   +IE P L+   +  ++    
Sbjct: 190 L--EFVRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKVFTIEVPSLQRLTIHDNNDGPE 249

Query: 318 --QWYLGFPKVK-LLTPKLKSVKFC 329
              + +  P +K LL  +L+  +FC
Sbjct: 250 FWGYVINAPFLKYLLIEELRCPEFC 259

BLAST of Spg020956 vs. ExPASy TrEMBL
Match: A0A5A7TCF1 (F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00570 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 7.4e-77
Identity = 177/324 (54.63%), Postives = 219/324 (67.59%), Query Frame = 0

Query: 81  SLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPF 140
           +L IM D DRISLL DTLLHHILS  N K VVQTC+LSKRWKTLWT IPTLNFD++S+  
Sbjct: 10  NLRIMKD-DRISLLPDTLLHHILSSFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSS 69

Query: 141 EQSTG-NGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHH 200
             S   +   SK  S K FIFRV S+H    I+KL+Y+SS + +E+VL VELLICY   H
Sbjct: 70  SSSFNYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVL-VELLICYAGSH 129

Query: 201 PVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGYEWG 260
            VQ+LCINT+N   ++W      CSSL  LKM CGF+DDW    L LP L+ILEI  +W 
Sbjct: 130 NVQQLCINTYNIGIYEWDYCFPICSSLIELKMVCGFVDDW--GVLALPSLKILEIQCDWS 189

Query: 261 DCD--AKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVK 320
             D  A Y    M S CP+LESLVLV+ L ++ +I AP L+NF+L  +S    L FP+V+
Sbjct: 190 ARDERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKL-CASHDMELTFPQVE 249

Query: 321 LLTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLF 380
           LLTP LK+V F NVLP + SDSEFSCI +V+I + DS F  DGS TQ+L   F  LL + 
Sbjct: 250 LLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVL 309

Query: 381 HNARSFTLPLKAMEFLVAELLEDV 401
           HNA SFTLP+KA + ++  L+  V
Sbjct: 310 HNASSFTLPMKATQEVLFPLIGSV 328

BLAST of Spg020956 vs. ExPASy TrEMBL
Match: A0A1S3CB41 (F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.3e-76
Identity = 173/316 (54.75%), Postives = 215/316 (68.04%), Query Frame = 0

Query: 81  SLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPF 140
           +L IM D DRISLL D+LLHHILS  N K VVQTC+LSKRWKTLWT IPTLNFD++S+  
Sbjct: 10  NLRIMED-DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSS 69

Query: 141 EQSTG-NGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHH 200
             S   +   SK  S K FIFRV S+H    I+KL+Y+SS + +E+VL VELLICY   H
Sbjct: 70  SSSFNYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVL-VELLICYAGSH 129

Query: 201 PVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGYEWG 260
            VQ+LC+NT+N   ++W      CSSL  LKM CGF+DDW    L LP L+ILEI  +W 
Sbjct: 130 NVQQLCVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDW--GVLALPSLKILEIQCDWS 189

Query: 261 DCD--AKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVK 320
             D  A Y    M S CP+LESLVLV+ L ++ +I AP L+NF+L  +S    L FP+V+
Sbjct: 190 ARDERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKL-CASHDMELTFPQVE 249

Query: 321 LLTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLF 380
           LLTP LK+V F NVLP + SDSEFSCI +V+I + DS F  DGS TQ+L   F  LL + 
Sbjct: 250 LLTPTLKAVNFVNVLPVLESDSEFSCIQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVL 309

Query: 381 HNARSFTLPLKAMEFL 393
           HNA SFTLP+KA + +
Sbjct: 310 HNASSFTLPMKATQVI 320

BLAST of Spg020956 vs. ExPASy TrEMBL
Match: A0A6J1CJ18 (LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordica charantia OX=3673 GN=LOC111012046 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 3.2e-72
Identity = 155/273 (56.78%), Postives = 195/273 (71.43%), Query Frame = 0

Query: 88  MDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNG 147
           +DRISLL D+LLH ILS LN + VVQTCVLSKRWKTLWTDIPTLNFDFDSYPF+QS  N 
Sbjct: 11  LDRISLLPDSLLHSILSLLNTRQVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFKQSIRNS 70

Query: 148 PYS--KYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHHPVQELC 207
             S  K  S +RFI RV SEH C++I  L++S S  +++ V ++E LICY   H VQELC
Sbjct: 71  SASNPKEPSFERFILRVLSEHGCKNIITLNFSCSRDSDDTVSLIEWLICYA-SHVVQELC 130

Query: 208 INTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIGYEWGD-CDAKY 267
           I+T+ T+Y++WP  L  CSSL VLK+ CGF+DD    +    LRILEI  +WGD  D KY
Sbjct: 131 ISTYKTIYYNWPCGLSTCSSLLVLKIKCGFVDDCGALK-SASLRILEIECDWGDRYDRKY 190

Query: 268 SVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVKLLTPKLKS 327
           +   M S CP+LESLVLVN L D+ +I AP+L+N EL  S        P+V+L  P LK+
Sbjct: 191 NEIEMFSGCPNLESLVLVNYLFDSATISAPKLENLELCAS-------XPQVELFAPSLKT 250

Query: 328 VKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDG 358
           +KF NVLPT+ S S+F+CIH+VNI V+D +F+G
Sbjct: 251 LKFGNVLPTLKSASKFACIHKVNIQVEDCNFEG 274

BLAST of Spg020956 vs. ExPASy TrEMBL
Match: A0A6J1CKA9 (LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica charantia OX=3673 GN=LOC111012077 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.7e-68
Identity = 177/373 (47.45%), Postives = 227/373 (60.86%), Query Frame = 0

Query: 22  IAIFPAFSSSSCTLSMACGRNAYSIHCRSDEALLVSQTLFNTLSLLVVDETLKISPDALS 81
           +A+ P  +S    +  +  R  YS+      +  +S  +  TL      ETL++     S
Sbjct: 50  LAVPPTINSVHRHIWSSGIRGVYSVKSGYRYSKRISAAISYTLKF----ETLQLRVPQFS 109

Query: 82  LSIMNDM-----DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFD 141
           + +         DRISLL D LL HILS +N K VVQTCVLSKRWKTLWT IPTLNF+F 
Sbjct: 110 VGLSMSKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFK 169

Query: 142 SYPFEQSTGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYT 201
           SYPFE+ + N   SK SS K FIFR+ SE     I+KLSY+SS + +E VL VELLIC+ 
Sbjct: 170 SYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVL-VELLICFA 229

Query: 202 RHHPVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGY 261
           R H V+EL ++T+    +DW   L  CSSLTVLKM CGF+ DW    L LP LRILEI  
Sbjct: 230 RRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADW--GVLTLPSLRILEIEX 289

Query: 262 EWGDCDAKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKV 321
           E  + DA Y    M S CP+L+SLVL+N L ++ +I AP+L+N  L   +    L F +V
Sbjct: 290 EDCEDDADYKGIRMFSGCPNLKSLVLINYLFESATICAPKLENLVLCSGNE---LVFSEV 349

Query: 322 KL-LTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDF-DGDGSATQKLTEDFSQLL 381
           +L  T  L++V F N+LPTV S  EFSCI +VNI V +  F  G+G   Q     FS+L 
Sbjct: 350 ELTCTSSLRNVTFSNMLPTVNSALEFSCIQKVNIEVHNYQFSSGNGYFCQNKIAAFSELF 409

Query: 382 QLFHNARSFTLPL 387
           ++FHNARSF LPL
Sbjct: 410 RVFHNARSFILPL 412

BLAST of Spg020956 vs. ExPASy TrEMBL
Match: A0A1S3CBU6 (F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498689 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.4e-59
Identity = 151/316 (47.78%), Postives = 189/316 (59.81%), Query Frame = 0

Query: 81  SLSIMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPF 140
           +L IM D DRISLL D+LLHHILS  N K VVQTC+LSKRWKTLWT IPTLNFD++S+  
Sbjct: 10  NLRIMED-DRISLLPDSLLHHILSTFNTKFVVQTCLLSKRWKTLWTLIPTLNFDYNSFSS 69

Query: 141 EQSTG-NGPYSKYSSIKRFIFRVFSEHRCESIKKLSYSSSIHTEEAVLVVELLICYTRHH 200
             S   +   SK  S K FIFRV S+H    I+KL+Y+SS + +E+VL VELLICY   H
Sbjct: 70  SSSFNYDDEESKRRSFKFFIFRVLSKHCATDIQKLTYTSSPNGDESVL-VELLICYAGSH 129

Query: 201 PVQELCINTFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLP-LRILEIGYEWG 260
            VQ+LC+NT+N   ++W      CSSL  LKM CGF+DDW    L LP L+ILEI  +W 
Sbjct: 130 NVQQLCVNTYNIGIYEWDYCFPICSSLIELKMVCGFVDDW--GVLALPSLKILEIQCDWS 189

Query: 261 DCD--AKYSVTWMLSECPSLESLVLVNCLSDNVSIEAPELKNFELSLSSSQWYLGFPKVK 320
             D  A Y    M S CP+LESLVLV+ L ++ +I AP L+NF+L  S            
Sbjct: 190 ARDERANYDGITMFSGCPNLESLVLVDYLFESATISAPRLENFKLCAS------------ 249

Query: 321 LLTPKLKSVKFCNVLPTVTSDSEFSCIHEVNIAVDDSDFDGDGSATQKLTEDFSQLLQLF 380
                               D E +   +V+I + DS F  DGS TQ+L   F  LL + 
Sbjct: 250 -------------------HDMELTFPQKVDIQLKDSVFTTDGSQTQELKSKFIDLLSVL 290

Query: 381 HNARSFTLPLKAMEFL 393
           HNA SFTLP+KA + +
Sbjct: 310 HNASSFTLPMKATQVI 290

BLAST of Spg020956 vs. TAIR 10
Match: AT1G55660.1 (FBD, F-box and Leucine Rich Repeat domains containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 5.0e-17
Identity = 82/268 (30.60%), Postives = 123/268 (45.90%), Query Frame = 0

Query: 84  IMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQS 143
           + N MD+IS L D LL  +LSFL+ K  V T +LS RWK+LW  +P L ++F  Y   + 
Sbjct: 48  VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEG 107

Query: 144 TGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYS------SSIHTEEAVLVVELLICYTR 203
            G         + RFI      H+  +I+ LS         SI  ++  L V L +  + 
Sbjct: 108 QG---------LARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSN 167

Query: 204 HHPVQELCINTFNTVYF--DWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIG- 263
              V+EL +  FN        P  L +C S+ +LK+    L D   +  L  L+ L +G 
Sbjct: 168 ---VRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGR 227

Query: 264 YEWGDCDAKYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLG 323
             + D +   S+  +LS CP LE LV+     DN   +S+    L+   L +S      G
Sbjct: 228 VTYSDAN---SLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTLKMSRPCHLDG 287

Query: 324 FPKVKLLTPKLKSVKFCNVLPTVTSDSE 340
              +K+ +P LK +K  +      SD E
Sbjct: 288 ---LKMNSPSLKYLKVIDERLESDSDDE 297

BLAST of Spg020956 vs. TAIR 10
Match: AT1G55660.2 (FBD, F-box and Leucine Rich Repeat domains containing protein )

HSP 1 Score: 86.7 bits (213), Expect = 5.0e-17
Identity = 82/268 (30.60%), Postives = 123/268 (45.90%), Query Frame = 0

Query: 84  IMNDMDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQS 143
           + N MD+IS L D LL  +LSFL+ K  V T +LS RWK+LW  +P L ++F  Y   + 
Sbjct: 48  VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLEYNFRHYSVSEG 107

Query: 144 TGNGPYSKYSSIKRFIFRVFSEHRCESIKKLSYS------SSIHTEEAVLVVELLICYTR 203
            G         + RFI      H+  +I+ LS         SI  ++  L V L +  + 
Sbjct: 108 QG---------LARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVSLAVHVSN 167

Query: 204 HHPVQELCINTFNTVYF--DWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIG- 263
              V+EL +  FN        P  L +C S+ +LK+    L D   +  L  L+ L +G 
Sbjct: 168 ---VRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGR 227

Query: 264 YEWGDCDAKYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLG 323
             + D +   S+  +LS CP LE LV+     DN   +S+    L+   L +S      G
Sbjct: 228 VTYSDAN---SLHRLLSNCPVLEDLVMERDKIDNLGKLSVIVKSLQRLTLKMSRPCHLDG 287

Query: 324 FPKVKLLTPKLKSVKFCNVLPTVTSDSE 340
              +K+ +P LK +K  +      SD E
Sbjct: 288 ---LKMNSPSLKYLKVIDERLESDSDDE 297

BLAST of Spg020956 vs. TAIR 10
Match: AT4G00315.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 83.6 bits (205), Expect = 4.2e-16
Identity = 83/264 (31.44%), Postives = 119/264 (45.08%), Query Frame = 0

Query: 88  MDRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNG 147
           MD+ S L D LL  +LSFL  K  V+T +LS RWK+LW  +P L +DF  Y   +  G  
Sbjct: 1   MDKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQG-- 60

Query: 148 PYSKYSSIKRFIFRVFSEHRCESIKKLSYS------SSIHTEEAVLVVELLICYTRHHPV 207
                  + RFI      H+  +I+ LS         SI  E+  L V L +       V
Sbjct: 61  -------LARFITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVSLAV---HDSNV 120

Query: 208 QELCIN--TFNTVYFDWPLDLLECSSLTVLKMTCGFLDDWVFEELLLPLRILEIG-YEWG 267
           +EL +   TF       P  L +C S+ +LK+    L D   +  L  L+ L +G   + 
Sbjct: 121 RELSLKLCTFAERPTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYS 180

Query: 268 DCDAKYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLGFPKV 327
           D D   S+  +LS CP LE LV+     DN   +S+    L+   L +S      G   +
Sbjct: 181 DED---SLHRLLSNCPVLEDLVVERDRIDNLGKLSVVVKSLQRLTLKMSCPCHLDG---I 240

Query: 328 KLLTPKLKSVKFCNVLPTVTSDSE 340
            + TP LK +K  +      SD+E
Sbjct: 241 MMNTPSLKYLKVTDERQESDSDNE 246

BLAST of Spg020956 vs. TAIR 10
Match: AT5G56420.1 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-14
Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 0

Query: 89  DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNGP 148
           DR+S L D  L  ILS+L  K V+ T +LSKRW+ LWT +P LN+D   +          
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHD--------- 65

Query: 149 YSKYSSIKRFIFRVFSEHRCESIKKLS--YSSSIHTEEAVLVVELLICYTRHHPVQELCI 208
            +      +F+ R    H+  +++ L+    S   T E  + V + I   R   V+EL +
Sbjct: 66  -NTCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRF--VRELSV 125

Query: 209 N-TFNTVYFDWPLDLLECSSLTVLKMTCGFLDD---WVFEELLLPLRILEIGYEWGDCDA 268
           +          P  L  CS+L VLK+    L+D   +V  + L  L +L++ Y       
Sbjct: 126 SYCSGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYL-----D 185

Query: 269 KYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLGFPKVKLLT 326
             S+  ++S C SLE LV+  C  DN   V++ AP LK   L  SS  +        + T
Sbjct: 186 DQSLPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDT 234

BLAST of Spg020956 vs. TAIR 10
Match: AT5G56420.2 (F-box/RNI-like/FBD-like domains-containing protein )

HSP 1 Score: 77.8 bits (190), Expect = 2.3e-14
Identity = 78/246 (31.71%), Postives = 115/246 (46.75%), Query Frame = 0

Query: 89  DRISLLSDTLLHHILSFLNIKSVVQTCVLSKRWKTLWTDIPTLNFDFDSYPFEQSTGNGP 148
           DR+S L D  L  ILS+L  K V+ T +LSKRW+ LWT +P LN+D   +          
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHD--------- 65

Query: 149 YSKYSSIKRFIFRVFSEHRCESIKKLS--YSSSIHTEEAVLVVELLICYTRHHPVQELCI 208
            +      +F+ R    H+  +++ L+    S   T E  + V + I   R   V+EL +
Sbjct: 66  -NTCPRFSQFVDRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRF--VRELSV 125

Query: 209 N-TFNTVYFDWPLDLLECSSLTVLKMTCGFLDD---WVFEELLLPLRILEIGYEWGDCDA 268
           +          P  L  CS+L VLK+    L+D   +V  + L  L +L++ Y       
Sbjct: 126 SYCSGEEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYL-----D 185

Query: 269 KYSVTWMLSECPSLESLVLVNCLSDN---VSIEAPELKNFELSLSSSQWYLGFPKVKLLT 326
             S+  ++S C SLE LV+  C  DN   V++ AP LK   L  SS  +        + T
Sbjct: 186 DQSLPRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFLIDT 234

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0039267.11.5e-7654.63F-box/LRR-repeat protein [Cucumis melo var. makuwa] >TYK00453.1 F-box/LRR-repeat... [more]
XP_008459617.11.3e-7554.75PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo][more]
XP_038890214.11.1e-7454.40F-box/LRR-repeat protein At3g26922-like [Benincasa hispida][more]
XP_022141765.16.7e-7256.78LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820, partial [M... [more]
XP_022141791.17.6e-6847.45LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica char... [more]
Match NameE-valueIdentityDescription
Q1PFK07.0e-1630.60F-box/LRR-repeat protein At1g55660 OS=Arabidopsis thaliana OX=3702 GN=At1g55660 ... [more]
Q3EAE55.9e-1531.44Putative F-box/FBD/LRR-repeat protein At4g00315 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9LXJ78.6e-1430.09FBD-associated F-box protein At3g52670 OS=Arabidopsis thaliana OX=3702 GN=At3g52... [more]
Q9FM893.3e-1331.71F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana OX=3702 GN=At5g56... [more]
Q9LXJ64.7e-1227.55F-box/FBD/LRR-repeat protein At3g52680 OS=Arabidopsis thaliana OX=3702 GN=At3g52... [more]
Match NameE-valueIdentityDescription
A0A5A7TCF17.4e-7754.63F-box/LRR-repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A1S3CB416.3e-7654.75F-box/LRR-repeat protein At3g26922-like isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
A0A6J1CJ183.2e-7256.78LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g56820 OS=Momordic... [more]
A0A6J1CKA93.7e-6847.45LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like OS=Momordica ch... [more]
A0A1S3CBU62.4e-5947.78F-box/LRR-repeat protein At3g26922-like isoform X2 OS=Cucumis melo OX=3656 GN=LO... [more]
Match NameE-valueIdentityDescription
AT1G55660.15.0e-1730.60FBD, F-box and Leucine Rich Repeat domains containing protein [more]
AT1G55660.25.0e-1730.60FBD, F-box and Leucine Rich Repeat domains containing protein [more]
AT4G00315.14.2e-1631.44F-box/RNI-like/FBD-like domains-containing protein [more]
AT5G56420.12.3e-1431.71F-box/RNI-like/FBD-like domains-containing protein [more]
AT5G56420.22.3e-1431.71F-box/RNI-like/FBD-like domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 94..134
e-value: 0.0091
score: 25.2
IPR001810F-box domainPFAMPF00646F-boxcoord: 90..128
e-value: 1.5E-6
score: 27.9
NoneNo IPR availableGENE3D1.20.1280.50coord: 79..131
e-value: 3.6E-7
score: 32.0
NoneNo IPR availablePANTHERPTHR34223:SF51OS11G0201299 PROTEINcoord: 86..388
NoneNo IPR availablePANTHERPTHR34223OS11G0201299 PROTEINcoord: 86..388
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..33
score: 5.0
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 88..146

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020956.1Spg020956.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding