Spg020887 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020887
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Protein MNN4-like
Location	scaffold9: 3547649 .. 3550161 (-)
RNA-Seq Expression	Spg020887
Synteny	Spg020887

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGCACACGAAGAACGAGACCCACGGGATTCTCGCCGGCGGTTGTGAACCAAACGCCCAACGCTCAAGCTCCATCCTCTTCGGCAATTTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTTCACCAAGACGGTTCACCCGCGCCACTGCTGTTCGTCAAACCCAAAAACCCGCCACTCAACAGTACAGAAAACGTTCGCGGGAGTGGTTTGAAATGATCCGTGAGATGGGTTCCAAGAGACGAGCTGCCCTTGAAGAAGAAGGGAATCGGCAAGATGAAGACAAAGCCGCCAAGGCAGCTGAAAGCTCTCGGCAAGGAGAAACTTCATTGGGTAAGGTTTCTGAACCTTCAACTAACCCTTCTCTCTTTTGCAGGATCAAGCTCGTTGTTACTTACAGCGCAAGAAAGAGGAGCTTGAAGAAGGTTGAGTCTGAAAAGCCGCTTGAAATGGAGTCCCTCAAAACCGCAAGGATGCCTCCGGACGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGCCCTTGAGATTGCAGAGGGGTACAAGGCTGAACAAGATGCTTTGAAAGAAGTTGAAGCGGAGAGAGAGATGGAAAATAAGAAAATGGCTGAGGAAGATGAGTTTGCAAAGGAAAGAGATGAGGGGAATGAGAAAAGAAAAAGAGAAGAAGAGCAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAGAAAAGATTAGGTGAAAGCCTCAGGAGGGCAGCCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGGGAAAAAATAAAAGAAGATGAAAGGCGAAGAAAAGAAGCCGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTACAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAAATGAAGAAATTTTTGAAAAAGAAAAAGGAAGAGAAATGGAGAATGAAGGCCAGAATGTGACCGCATTTGGACCGCATACTGAGGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAAAGGTTTTTGAGCCTCTATTCACACATGACCCACCAGCAGCTAATAGCACCTCTTCGGGAGAGAAGAGGGATGATGAGAAAAAAGAAGACGAGGAGGCCGAGACCTCCAGTGATTCTGATTCTGATTTAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGATCAAGCCACTATCTCTGCAGCGTTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCTGAGAGGAGGACAAAGAACAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACTCCTCTCCTACAGTCCCTCCGACCGTCTCACCCACCAAGCCTAAGGGCAAGTCACCGAAGGCCGCATCACCTAAAAATCCATTCCCCAAGGTATTTAAAGATATTAATTTTCAAGAACGGATGGAGATCATGAAGAAGAGAGATTTCCTCAATGAGAAAGGATTCTCTAACAGAGCAGGAGCACTGCCAGAGTTCGTGAGCAAGATCATATCTCAATACAAATGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTGCGAGAATTTTACGCCAGCCTGAGGGAGGAGAGCATTAGCATGGCGGTGGTGAGGGGGAAGATGGTCAGTTTCTCCTCTGTCGACATTAACAGGGTGTACAGGATCAAAGCACCTTTGAACCCAAGAAGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGAAAGAAGCATTGAAACTTGTGGCCAACAAGGGGATCCAGTGGAAAGAATCACAGACAAAAGTGAAGTCTCTAGTGTCAAGCGACCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTCATAAAAAACCACTTGATGCCAACCACCCACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAAATCAACGTAGGGAGCATTATCAGGGATGAAATCTTAGCCTGTGGACGGAAAAGGGCAGGCAAGCTTTTCTTGGCTCACTCATCACCCAGCTCTGTCAAAGGGTGAAGATTGTGCCAGGCAAGGACGAGGAGCGCCATTTCTTTAAACCAACCATTGACTTGTCCTTGATAGGAAAACTCTAGCAGAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAAGCCACTCCTCAATCAGGGTCGAATGTAGCTTCTTCATCCCAGCACACTCCTTTCACAGGGCCATCACCGTCATCAGAGGCCCTAGCTATTGCCTACCGCCAGATAGATCGACTCAGGGACGACCTAAGGACATACTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTATCTCTCTATAGCCCCGAGTATTAGTCCGGTCTTTCCTAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGATGAAGAGAAAGAGAGTTCCTCAGACGAGGAATAG

mRNA sequence

ATGCAAGGCACACGAAGAACGAGACCCACGGGATTCTCGCCGGCGGTTGTGAACCAAACGCCCAACGCTCAAGCTCCATCCTCTTCGGCAATTTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTTCACCAAGACGGTTCACCCGCGCCACTGCTGTTCGTCAAACCCAAAAACCCGCCACTCAACAGTACAGAAAACGTTCGCGGGAGTGGTTTGAAATGATCCGTGAGATGGGTTCCAAGAGACGAGCTGCCCTTGAAGAAGAAGGGAATCGGCAAGATGAAGACAAAGCCGCCAAGGCAGCTGAAAGCTCTCGGCAAGGAGAAACTTCATTGGGTAAGGTTTCTGAACCTTCAACTAACCCTTCTCTCTTTTGCAGGATCAAGCTCGTTGTTACTTACAGCGCAAGAAAGAGGAGCTTGAAGAAGGTTGAGTCTGAAAAGCCGCTTGAAATGGAGTCCCTCAAAACCGCAAGGATGCCTCCGGACGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGCCCTTGAGATTGCAGAGGGGTACAAGGCTGAACAAGATGCTTTGAAAGAAGTTGAAGCGGAGAGAGAGATGGAAAATAAGAAAATGGCTGAGGAAGATGAGTTTGCAAAGGAAAGAGATGAGGGGAATGAGAAAAGAAAAAGAGAAGAAGAGCAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAGAAAAGATTAGGTGAAAGCCTCAGGAGGGCAGCCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGGGAAAAAATAAAAGAAGATGAAAGGCGAAGAAAAGAAGCCGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTACAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAAATGAAGAAATTTTTGAAAAAGAAAAAGGAAGAGAAATGGAGAATGAAGGCCAGAATGTGACCGCATTTGGACCGCATACTGAGGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAAAGGTTTTTGAGCCTCTATTCACACATGACCCACCAGCAGCTAATAGCACCTCTTCGGGAGAGAAGAGGGATGATGAGAAAAAAGAAGACGAGGAGGCCGAGACCTCCAGTGATTCTGATTCTGATTTAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGATCAAGCCACTATCTCTGCAGCGTTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCTGAGAGGAGGACAAAGAACAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACTCCTCTCCTACAGTCCCTCCGACCGTCTCACCCACCAAGCCTAAGGGCAAGTCACCGAAGGCCGCATCACCTAAAAATCCATTCCCCAAGGTATTTAAAGATATTAATTTTCAAGAACGGATGGAGATCATGAAGAAGAGAGATTTCCTCAATGAGAAAGGATTCTCTAACAGAGCAGGAGCACTGCCAGAGTTCGTGAGCAAGATCATATCTCAATACAAATGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTGCGAGAATTTTACGCCAGCCTGAGGGAGGAGAGCATTAGCATGGCGGTGGTGAGGGGGAAGATGGTCAGTTTCTCCTCTGTCGACATTAACAGGGTGTACAGGATCAAAGCACCTTTGAACCCAAGAAGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGAAAGAAGCATTGAAACTTGTGGCCAACAAGGGGATCCAGTGGAAAGAATCACAGACAAAAGTGAAGTCTCTAGTGTCAAGCGACCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTCATAAAAAACCACTTGATGCCAACCACCCACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAAATCAACGTAGGGAGCATTATCAGGGATGAAATCTTAGCCTGTGGACGGAAAAGGGCAGGCAAGCTTTTCTTGGCTCACTCATCACCCAGCTCTAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAAGCCACTCCTCAATCAGGGTCGAATGTAGCTTCTTCATCCCAGCACACTCCTTTCACAGGGCCATCACCGTCATCAGAGGCCCTAGCTATTGCCTACCGCCAGATAGATCGACTCAGGGACGACCTAAGGACATACTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTATCTCTCTATAGCCCCGAGTATTAGTCCGGTCTTTCCTAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGATGAAGAGAAAGAGAGTTCCTCAGACGAGGAATAG

Coding sequence (CDS)

ATGCAAGGCACACGAAGAACGAGACCCACGGGATTCTCGCCGGCGGTTGTGAACCAAACGCCCAACGCTCAAGCTCCATCCTCTTCGGCAATTTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTTCACCAAGACGGTTCACCCGCGCCACTGCTGTTCGTCAAACCCAAAAACCCGCCACTCAACAGTACAGAAAACGTTCGCGGGAGTGGTTTGAAATGATCCGTGAGATGGGTTCCAAGAGACGAGCTGCCCTTGAAGAAGAAGGGAATCGGCAAGATGAAGACAAAGCCGCCAAGGCAGCTGAAAGCTCTCGGCAAGGAGAAACTTCATTGGGTAAGGTTTCTGAACCTTCAACTAACCCTTCTCTCTTTTGCAGGATCAAGCTCGTTGTTACTTACAGCGCAAGAAAGAGGAGCTTGAAGAAGGTTGAGTCTGAAAAGCCGCTTGAAATGGAGTCCCTCAAAACCGCAAGGATGCCTCCGGACGTATTCGAAGGAATAATTCGCCAAGCAGTGGCAAAGGCCCTTGAGATTGCAGAGGGGTACAAGGCTGAACAAGATGCTTTGAAAGAAGTTGAAGCGGAGAGAGAGATGGAAAATAAGAAAATGGCTGAGGAAGATGAGTTTGCAAAGGAAAGAGATGAGGGGAATGAGAAAAGAAAAAGAGAAGAAGAGCAAGAGGCCGAGAGGGCCTTAGAAGCTGAAGAAGAGAAAAGATTAGGTGAAAGCCTCAGGAGGGCAGCCATTGATTTGCAACTCCTTGAGGAAGAGAAAAAGAGAAGGGAAAAAATAAAAGAAGATGAAAGGCGAAGAAAAGAAGCCGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTACAAGGAAGGGTAGAAGAAGAGGCCCAACAGGGGCCAAATGAAGAAATTTTTGAAAAAGAAAAAGGAAGAGAAATGGAGAATGAAGGCCAGAATGTGACCGCATTTGGACCGCATACTGAGGAAGGCCTAGCCGAGGCCACCATTGATCAGCCAGCTGAAAAGGTTTTTGAGCCTCTATTCACACATGACCCACCAGCAGCTAATAGCACCTCTTCGGGAGAGAAGAGGGATGATGAGAAAAAAGAAGACGAGGAGGCCGAGACCTCCAGTGATTCTGATTCTGATTTAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGATCAAGCCACTATCTCTGCAGCGTTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCTGAGAGGAGGACAAAGAACAAAAATGACCCGATATTTGCCAAGAGGCCGAGGACAAGGTCCATGGACTCCTCTCCTACAGTCCCTCCGACCGTCTCACCCACCAAGCCTAAGGGCAAGTCACCGAAGGCCGCATCACCTAAAAATCCATTCCCCAAGGTATTTAAAGATATTAATTTTCAAGAACGGATGGAGATCATGAAGAAGAGAGATTTCCTCAATGAGAAAGGATTCTCTAACAGAGCAGGAGCACTGCCAGAGTTCGTGAGCAAGATCATATCTCAATACAAATGGCAGGAGTTCTGTGCTCACCCTCAGGAGGCTGTTGTGCCTCTAGTGCGAGAATTTTACGCCAGCCTGAGGGAGGAGAGCATTAGCATGGCGGTGGTGAGGGGGAAGATGGTCAGTTTCTCCTCTGTCGACATTAACAGGGTGTACAGGATCAAAGCACCTTTGAACCCAAGAAGGAATGATGTGATCAGGAACCCTTCGGCCAAGCAAATGAAAGAAGCATTGAAACTTGTGGCCAACAAGGGGATCCAGTGGAAAGAATCACAGACAAAAGTGAAGTCTCTAGTGTCAAGCGACCTAAAGCCAGAATCGGCAGTTTGGCTTCACTTCATAAAAAACCACTTGATGCCAACCACCCACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGTCTTATGAAGGGGTTGGAAATCAACGTAGGGAGCATTATCAGGGATGAAATCTTAGCCTGTGGACGGAAAAGGGCAGGCAAGCTTTTCTTGGCTCACTCATCACCCAGCTCTAACAACATCCAGAGGAAGGATAAAGCCTCCACATCACAAGCCACTCCTCAATCAGGGTCGAATGTAGCTTCTTCATCCCAGCACACTCCTTTCACAGGGCCATCACCGTCATCAGAGGCCCTAGCTATTGCCTACCGCCAGATAGATCGACTCAGGGACGACCTAAGGACATACTGGGCATATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTATCTCTCTATAGCCCCGAGTATTAGTCCGGTCTTTCCTAATTTCCCTCAGTCGCTGCTGCCCCAAGAAGAAGAGGATTCTGATGAAGAGGAAGATGAAGAGAATGATGAAGAGAAAGAGAGTTCCTCAGACGAGGAATAG

Protein sequence

MQGTRRTRPTGFSPAVVNQTPNAQAPSSSAISATSREMPSSSSPRRFTRATAVRQTQKPATQQYRKRSREWFEMIREMGSKRRAALEEEGNRQDEDKAAKAAESSRQGETSLGKVSEPSTNPSLFCRIKLVVTYSARKRSLKKVESEKPLEMESLKTARMPPDVFEGIIRQAVAKALEIAEGYKAEQDALKEVEAEREMENKKMAEEDEFAKERDEGNEKRKREEEQEAERALEAEEEKRLGESLRRAAIDLQLLEEEKKRREKIKEDERRRKEAEDFLAAFEPLHKAQSEAEALQGRVEEEAQQGPNEEIFEKEKGREMENEGQNVTAFGPHTEEGLAEATIDQPAEKVFEPLFTHDPPAANSTSSGEKRDDEKKEDEEAETSSDSDSDLESDSEIRELDGDQATISAALRRKRKREIKAERRTKNKNDPIFAKRPRTRSMDSSPTVPPTVSPTKPKGKSPKAASPKNPFPKVFKDINFQERMEIMKKRDFLNEKGFSNRAGALPEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLFLAHSSPSSNNIQRKDKASTSQATPQSGSNVASSSQHTPFTGPSPSSEALAIAYRQIDRLRDDLRTYWAYAKERDEAIREFYLSIAPSISPVFPNFPQSLLPQEEEDSDEEEDEENDEEKESSSDEE

Homology

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BLAST of Spg020887 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 151.0 bits (380), Expect = 4.4e-32
Identity = 108/351 (30.77%), Postives = 177/351 (50.43%), Query Frame = 0


Query: 487 MKKRDFLNEKGF----SNRAGALPEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLRE 546
           ++ R    EKGF    S   G LP F++++I+Q+ W++FCAHP++ +VPLVREFYA+L +
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 97

Query: 547 ESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQW 606
              +   VRG  VS+S   IN V+ +  P++   ++ I+N + + +   L+ VA  G +W
Sbjct: 98  PEENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEW 157

Query: 607 KESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGS 666
             S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG 
Sbjct: 158 NVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 217

Query: 667 IIRDEILACGRKRAGKLF-------LAHSSPSSNNIQRKDKASTSQATPQSGSNVASSSQ 726
           +I  EI AC  ++ G LF       L  ++ +   +  +   +T +    + + +A    
Sbjct: 218 MIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGP 277

Query: 727 HTPFTGPSPSSEALAIAYR-------QIDRLRDDL---------------------RTYW 786
                 PS S  A A + R       Q+  L   L                     + +W
Sbjct: 278 TESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFW 337

Query: 787 AYAKERDEAIREFYLSIAPSISPVFPNFPQSLLPQEEEDSDEEEDEENDEE 799
           AY+KERD A+++   +      P FP FPQ +L   + + + E D++   E
Sbjct: 338 AYSKERDTALKKALQNNFTRPMPTFPAFPQEILKDLDYEYEAESDKDGSNE 386

[Close]

BLAST of Spg020887 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 150.6 bits (379), Expect = 5.8e-32
Identity = 79/198 (39.90%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 487 MKKRDFLNEKGF----SNRAGALPEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLRE 546
           ++ R    EKGF    S   G LP F++++I+Q+ W++FCAHP++ +VPLVREFYA+L +
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 88

Query: 547 ESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQW 606
              +   VRG  VS+S   IN V+ +  P++   ++ I N +   +   L+ VA  G +W
Sbjct: 89  PVENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEW 148

Query: 607 KESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGS 666
             S     + + S L P + VW HF+K+HL+PTTH  T+S DR++LL+ ++ G  INVG 
Sbjct: 149 NVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 208

Query: 667 IIRDEILACGRKRAGKLF 681
           +I  EI AC  ++ G LF
Sbjct: 209 MIHSEIRACAARKTGALF 224

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BLAST of Spg020887 vs. NCBI nr
Match: PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-26
Identity = 73/219 (33.33%), Postives = 119/219 (54.34%), Query Frame = 0


Query: 465 ASPKNPFPKVFKDINFQERMEIMKKRDFLNEKGF---SNRAGALPEFVSKIISQYKWQEF 524
           AS    F     +I ++E ++    R    EK F   +++    P F++ +I Q+ WQ F
Sbjct: 40  ASKAVKFESKAAEIRYEENIQ---NRPLSVEKEFVWDNSKPLEQPPFIADVIIQHNWQLF 99

Query: 525 CAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIR 584
           CAHP++ +VPLVREFY ++         +RG  V  S   IN ++ +  P++   ++ + 
Sbjct: 100 CAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPID-EHSEFVE 159

Query: 585 NPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTI 644
           + +  ++   L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+
Sbjct: 160 DITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTV 219

Query: 645 SVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF 681
           S + V LLY ++ G  INVG +I  EI AC  +++G LF
Sbjct: 220 SKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALF 254

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BLAST of Spg020887 vs. NCBI nr
Match: PON41193.1 (LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii])

HSP 1 Score: 117.1 bits (292), Expect = 7.1e-22
Identity = 58/175 (33.14%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 506 PEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRV 565
           P F + +I+Q+ W+ FCA+P++ ++PLV EFYA++ +       +  ++  F    IN +
Sbjct: 4   PPFPADVIAQHDWRLFCAYPEDPIMPLVCEFYANITDP--KEGTMYAEVFKFPEEAINAI 63

Query: 566 YRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWL 625
           + ++ P++   ++ +   +  ++   L+ VA    +W  S     + + S L   + +W 
Sbjct: 64  FGLRDPVD-EHSEFVEEVTEPKLLTVLETVAVTEAEWNVSSLGAYTCLQSSLNLATKIWY 123

Query: 626 HFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF 681
           HF+K++L+PTTH  T+S DR +LLY ++ G  INVG II  EI AC  K+ G LF
Sbjct: 124 HFLKSYLLPTTHGKTVSKDRALLLYSILIGKSINVGRIIYKEICACAAKKLGALF 175

[Close]

BLAST of Spg020887 vs. NCBI nr
Match: TYH88163.1 (hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum])

HSP 1 Score: 115.2 bits (287), Expect = 2.7e-21
Identity = 75/219 (34.25%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 466 SPKNPFPKVFKDINFQERME-IMKKRDFLNEKGF---SNRAGALPEFVSKIISQYKWQEF 525
           +PKNP   +  D   +ER + I K +  + EKGF   SN     P  + K I+ +KW+ F
Sbjct: 12  TPKNP---ILIDEEVKERFDSIFKHQPMMPEKGFDLKSNDLMVAPIPIRKKINAFKWERF 71

Query: 526 CAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIR 585
           C     +   LVREFYASL  +  +  +VR K V  +S  IN ++ +          +I 
Sbjct: 72  CNACSFSDDELVREFYASLTTQDATEVIVRKKKVPPTSKSINDLFNLPDVEEDEYYPMIN 131

Query: 586 NPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTI 645
           N +   +++ L +V N G QW   +    S     LKP + VW +F++   MP +H  TI
Sbjct: 132 NMNWDFLQQVLDVVTNSGSQWIIRKYGSHSCRREYLKPIANVWFYFVQYSFMPISHSYTI 191

Query: 646 SVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF 681
           S++R++LLY ++    INVG II  EI  C +K+AG ++
Sbjct: 192 SMERMLLLYAILTEKSINVGKIILKEIHNCAKKKAGSVY 227

[Close]

BLAST of Spg020887 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 2.1e-32
Identity = 108/351 (30.77%), Postives = 177/351 (50.43%), Query Frame = 0


Query: 487 MKKRDFLNEKGF----SNRAGALPEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLRE 546
           ++ R    EKGF    S   G LP F++++I+Q+ W++FCAHP++ +VPLVREFYA+L +
Sbjct: 38  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 97

Query: 547 ESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQW 606
              +   VRG  VS+S   IN V+ +  P++   ++ I+N + + +   L+ VA  G +W
Sbjct: 98  PEENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEW 157

Query: 607 KESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGS 666
             S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G  INVG 
Sbjct: 158 NVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 217

Query: 667 IIRDEILACGRKRAGKLF-------LAHSSPSSNNIQRKDKASTSQATPQSGSNVASSSQ 726
           +I  EI AC  ++ G LF       L  ++ +   +  +   +T +    + + +A    
Sbjct: 218 MIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGP 277

Query: 727 HTPFTGPSPSSEALAIAYR-------QIDRLRDDL---------------------RTYW 786
                 PS S  A A + R       Q+  L   L                     + +W
Sbjct: 278 TESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQQFW 337

Query: 787 AYAKERDEAIREFYLSIAPSISPVFPNFPQSLLPQEEEDSDEEEDEENDEE 799
           AY+KERD A+++   +      P FP FPQ +L   + + + E D++   E
Sbjct: 338 AYSKERDTALKKALQNNFTRPMPTFPAFPQEILKDLDYEYEAESDKDGSNE 386

[Close]

BLAST of Spg020887 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-32
Identity = 79/198 (39.90%), Postives = 121/198 (61.11%), Query Frame = 0


Query: 487 MKKRDFLNEKGF----SNRAGALPEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLRE 546
           ++ R    EKGF    S   G LP F++++I+Q+ W++FCAHP++ +VPLVREFYA+L +
Sbjct: 29  IQNRPLNAEKGFVLDNSETMGQLP-FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTD 88

Query: 547 ESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQW 606
              +   VRG  VS+S   IN V+ +  P++   ++ I N +   +   L+ VA  G +W
Sbjct: 89  PVENTVYVRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEW 148

Query: 607 KESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGS 666
             S     + + S L P + VW HF+K+HL+PTTH  T+S DR++LL+ ++ G  INVG 
Sbjct: 149 NVSAQGAYTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGR 208

Query: 667 IIRDEILACGRKRAGKLF 681
           +I  EI AC  ++ G LF
Sbjct: 209 MIHSEIRACAARKTGALF 224

[Close]

BLAST of Spg020887 vs. ExPASy TrEMBL
Match: A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.1e-27
Identity = 73/219 (33.33%), Postives = 119/219 (54.34%), Query Frame = 0


Query: 465 ASPKNPFPKVFKDINFQERMEIMKKRDFLNEKGF---SNRAGALPEFVSKIISQYKWQEF 524
           AS    F     +I ++E ++    R    EK F   +++    P F++ +I Q+ WQ F
Sbjct: 40  ASKAVKFESKAAEIRYEENIQ---NRPLSVEKEFVWDNSKPLEQPPFIADVIIQHNWQLF 99

Query: 525 CAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIR 584
           CAHP++ +VPLVREFY ++         +RG  V  S   IN ++ +  P++   ++ + 
Sbjct: 100 CAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTIFSLGDPID-EHSEFVE 159

Query: 585 NPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTI 644
           + +  ++   L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+
Sbjct: 160 DITKPELVIVLETVAIVGAEWNVSSQGAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTV 219

Query: 645 SVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF 681
           S + V LLY ++ G  INVG +I  EI AC  +++G LF
Sbjct: 220 SKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALF 254

[Close]

BLAST of Spg020887 vs. ExPASy TrEMBL
Match: A0A2P5AXB5 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_291710 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.4e-22
Identity = 58/175 (33.14%), Postives = 101/175 (57.71%), Query Frame = 0


Query: 506 PEFVSKIISQYKWQEFCAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRV 565
           P F + +I+Q+ W+ FCA+P++ ++PLV EFYA++ +       +  ++  F    IN +
Sbjct: 4   PPFPADVIAQHDWRLFCAYPEDPIMPLVCEFYANITDP--KEGTMYAEVFKFPEEAINAI 63

Query: 566 YRIKAPLNPRRNDVIRNPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWL 625
           + ++ P++   ++ +   +  ++   L+ VA    +W  S     + + S L   + +W 
Sbjct: 64  FGLRDPVD-EHSEFVEEVTEPKLLTVLETVAVTEAEWNVSSLGAYTCLQSSLNLATKIWY 123

Query: 626 HFIKNHLMPTTHDSTISVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF 681
           HF+K++L+PTTH  T+S DR +LLY ++ G  INVG II  EI AC  K+ G LF
Sbjct: 124 HFLKSYLLPTTHGKTVSKDRALLLYSILIGKSINVGRIIYKEICACAAKKLGALF 175

[Close]

BLAST of Spg020887 vs. ExPASy TrEMBL
Match: A0A5D2MA47 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-21
Identity = 75/219 (34.25%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 466 SPKNPFPKVFKDINFQERME-IMKKRDFLNEKGF---SNRAGALPEFVSKIISQYKWQEF 525
           +PKNP   +  D   +ER + I K +  + EKGF   SN     P  + K I+ +KW+ F
Sbjct: 12  TPKNP---ILIDEEVKERFDSIFKHQPMMPEKGFDLKSNDLMVAPIPIRKKINAFKWERF 71

Query: 526 CAHPQEAVVPLVREFYASLREESISMAVVRGKMVSFSSVDINRVYRIKAPLNPRRNDVIR 585
           C     +   LVREFYASL  +  +  +VR K V  +S  IN ++ +          +I 
Sbjct: 72  CNACSFSDDELVREFYASLTTQDATEVIVRKKKVPPTSKSINDLFNLPDVEEDEYYPMIN 131

Query: 586 NPSAKQMKEALKLVANKGIQWKESQTKVKSLVSSDLKPESAVWLHFIKNHLMPTTHDSTI 645
           N +   +++ L +V N G QW   +    S     LKP + VW +F++   MP +H  TI
Sbjct: 132 NMNWDFLQQVLDVVTNSGSQWIIRKYGSHSCRREYLKPIANVWFYFVQYSFMPISHSYTI 191

Query: 646 SVDRVMLLYCLMKGLEINVGSIIRDEILACGRKRAGKLF 681
           S++R++LLY ++    INVG II  EI  C +K+AG ++
Sbjct: 192 SMERMLLLYAILTEKSINVGKIILKEIHNCAKKKAGSVY 227

The following BLAST results are available for this feature:

BLAST of Spg020887 vs. NCBI nr


Match Name	E-value	Identity	Description
PON46472.1	4.4e-32	30.77	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
PON35554.1	5.8e-32	39.90	hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]	[more]
PON70375.1	1.3e-26	33.33	hypothetical protein PanWU01x14_080440 [Parasponia andersonii]	[more]
PON41193.1	7.1e-22	33.14	LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia anderson...	[more]
TYH88163.1	2.7e-21	34.25	hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]	[more]

BLAST of Spg020887 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg020887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5BCG4	2.1e-32	30.77	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5AGA5	2.8e-32	39.90	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A2P5DAQ2	6.1e-27	33.33	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE...	[more]
A0A2P5AXB5	3.4e-22	33.14	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_291710 PE...	[more]
A0A5D2MA47	1.3e-21	34.25	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D01G168900v1 P...	[more]

BLAST of Spg020887 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 780..800
None	No IPR available	COILS	Coil	Coil	coord: 218..239
None	No IPR available	COILS	Coil	Coil	coord: 183..216
None	No IPR available	COILS	Coil	Coil	coord: 245..275
None	No IPR available	COILS	Coil	Coil	coord: 285..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..397
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 684..726
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..472
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 769..806
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 782..806
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 684..724
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 423..437
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020887.1	Spg020887.1	mRNA