Spg020856 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020856
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	lysine-rich arabinogalactan protein 19
Location	scaffold10: 25751040 .. 25753353 (+)
RNA-Seq Expression	Spg020856
Synteny	Spg020856

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAAATCATGGCCTATTTTTGCCATCTGCCTTACCTTTCTATTCCCTCTGGCCCTCGGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCATCACCACCACCGTCCACCCTGCCACCAACCGCAACAACTCCGCCACCCTTGTCAACACCTCCCCCTACTGTTGCACCATCTACAAGCCCAACTGTCCCACCACCCCAACCGCCGCAAAGTTCCCCTGTCTCGACCCCGTCGCTACCTCCAGCGTCGCCTCCTCCACCCGTCACTCCTCCGCCATTGCCACCTCCTTTACCACCACCGCAGGTCTCTCCAACTCCTTCGCAAGCACCACCAGTGCCAGTTCCCACCCTAGCACCATTGCCAACTCCACCAACACCGGTGCCTTCACCGCCCGTTGCGGCGCCGGAGTTATCGCCTGCGCCAGCTCCGGGAAAGCACAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCACCAGCCCCCGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCGCCAGCGCCATCACCAAATCTGGTAAGTAAAATCATTTTCAGTATGTCTAGTTTTGTACACACATCTACTAAACTGGCTATAATAAATTCCAATGGCTAAAACACAATACTGTTTTTTTTTTGGGGGGTTAAAAAACACTTTTTTGTCCTTGAACTTTCGTAAAAGTAACCATTTAGTTTGGAAACTTTGATTGGTAATGATTTAGTCCATATACTTTCAATTTTGTAACAATTTAATTCATAAATTTAATATGTAACAATTTAGTCCCTAAACAATAAAACTTGTGACGATTTAGTCCTTGTCGTAAAAAATATTATTAAGATTTAATGAAATTTCTTACATATATAGATGGATAACTTGATTAGGAACATGTGTTTTTATAAACTACAAAGATTAAGTGATTATATAATAAAAATTGAAATTTAATTTCGATGAAATTGTTCACGTCAAGGACTGAATCCTTACAAATTTTATAGTACAAGGACTGAATTGTTACATAATAAAGTTCACGAACTAATTATTTTGTTACCAAATTGAGACTACATGGACTAAATCGTTAACAAAATAAAGTTTGAGGATTAAATTGTTACTTTTATGAAAATTCAAGGACCGAAAGTGTTTTTTAACCTTTTCTTTTTCATTGTACAATTTTATTTAGACCCATTTGATAACTATTTGATTTAAAAAATATATATATGTTGATTTTCTCCCAAATTTCTTACCATGGTTTTCATCTTTGTTAGGGACACATTTGAATTCTTAGTCAAATTCTAGAACACAAACAAGTTTTTTTAGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAATTAAGCTTATAAATCCTTCTTCCACCTACAAATTTCTTTGTTTTGCTAATATCTTTCTTTCCTTGTTTTTAAAAACCAAGCAAATTTTGAAAACTAAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTAGAATTTGGCTAGGAATTCAAATGTGTCATTGGTAAATATGAAAACCATGGTAGGGAAATTGGTAGAAAACGAACCTAATTTTCAAAAACCAAAAACAAAAAACCAAATGGTTATCAAACGGGGCCTTAGTTGTCAAAATTTGACTTGTTTTTTGAAAACATGAAAAGAAGGTAGATAACAAAATAAAGAAACTTATAGGTGAAAGTCGTGTTTACTAGTTTAATTTTCAAAAACAAAACATCAAATTGCTATCGAAAACCGCCTTAGTTTTCATCTTTAATCTATATTTTAATTTCTTTTCATTATTATTTAGATATCTCTACCATTAATGAAGATTAACAAAGATTCAACAGATGCATGGTAAAATTGAGACTAGTCAAAAGAAAAAGAAAAAGAATTTAACACAATATATTATATGAAAAAAAAAAAAAAGAAGATTGAATAGGAGATTTGTGTTCTTCTAATACCCATATTTGTTTATCAACAGAATGGAGGAGACCCAATGAAAGGAAAAGTACTGGGAACATGGAAGGGAGTTGGATTAGGAATCATAATTCTGGTTGCTACCGCAGGCTTCAATTTATAATTTTGAAGAGACAAAATTATTCACAAGAATCCATTAGGGTTCAAAAATTATAGAGTTTGCCCAGAACGTGAGAGAGATTTTTCATATATATATATACATATCATTTTTTTTAATGATTTGTGGATTGAAATAATAATGGAATTTTTTATTTTATTTTATTTTATTTTGTTAATCATAATCTTCAAGTTTCAAGCCGA

mRNA sequence

ATGGCTTCCAAATCATGGCCTATTTTTGCCATCTGCCTTACCTTTCTATTCCCTCTGGCCCTCGGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCATCACCACCACCGTCCACCCTGCCACCAACCGCAACAACTCCGCCACCCTTGTCAACACCTCCCCCTACTGTTGCACCATCTACAAGCCCAACTGTCCCACCACCCCAACCGCCGCAAAGTTCCCCTGTCTCGACCCCGTCGCTACCTCCAGCGTCGCCTCCTCCACCCGTCACTCCTCCGCCATTGCCACCTCCTTTACCACCACCGCAGGTCTCTCCAACTCCTTCGCAAGCACCACCAGTGCCAGTTCCCACCCTAGCACCATTGCCAACTCCACCAACACCGGTGCCTTCACCGCCCGTTGCGGCGCCGGAGTTATCGCCTGCGCCAGCTCCGGGAAAGCACAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCACCAGCCCCCGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCGCCAGCGCCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAAGTACTGGGAACATGGAAGGGAGTTGGATTAGGAATCATAATTCTGGTTGCTACCGCAGGCTTCAATTTATAA

Coding sequence (CDS)

ATGGCTTCCAAATCATGGCCTATTTTTGCCATCTGCCTTACCTTTCTATTCCCTCTGGCCCTCGGCCAAGCCCCGGCGCAGCCACCGAGCTTGCCGACCGCATCACCACCACCGTCCACCCTGCCACCAACCGCAACAACTCCGCCACCCTTGTCAACACCTCCCCCTACTGTTGCACCATCTACAAGCCCAACTGTCCCACCACCCCAACCGCCGCAAAGTTCCCCTGTCTCGACCCCGTCGCTACCTCCAGCGTCGCCTCCTCCACCCGTCACTCCTCCGCCATTGCCACCTCCTTTACCACCACCGCAGGTCTCTCCAACTCCTTCGCAAGCACCACCAGTGCCAGTTCCCACCCTAGCACCATTGCCAACTCCACCAACACCGGTGCCTTCACCGCCCGTTGCGGCGCCGGAGTTATCGCCTGCGCCAGCTCCGGGAAAGCACAAGCATAGGAGGCGTCACAAACATAAGAAGCATCAAGCACCAGCACCAGCCCCCGCCGTCCCAAGCCCACCAGCACCACCTACAGTGGTGGATTCACAAGATAGTACAGCGCCAGCGCCATCACCAAATCTGAATGGAGGAGACCCAATGAAAGGAAAAGTACTGGGAACATGGAAGGGAGTTGGATTAGGAATCATAATTCTGGTTGCTACCGCAGGCTTCAATTTATAA

Protein sequence

MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPTVAPSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPTLAPLPTPPTPVPSPPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFNL

Homology

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BLAST of Spg020856 vs. NCBI nr
Match: XP_038875574.1 (lysine-rich arabinogalactan protein 19-like [Benincasa hispida])

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-77
Identity = 188/229 (82.10%), Postives = 195/229 (85.15%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPT-VA 60
           MASKSWP   ICL FLFP A+GQAP QPP+LPT SPPPST PPT TTPPPLSTPPPT VA
Sbjct: 1   MASKSWPFSVICLGFLFPFAIGQAPVQPPTLPTVSPPPSTPPPTVTTPPPLSTPPPTVVA 60

Query: 61  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 120
           PSTSPT+PPPQP    P+STPSLPPA PPPP TPPPLPPPLPPPQVSPTPSQAPPVP PT
Sbjct: 61  PSTSPTIPPPQP----PISTPSLPPALPPPPATPPPLPPPLPPPQVSPTPSQAPPVPAPT 120

Query: 121 LAPLPTPPTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAP 180
           LAPL TPPTP+PSP    P+A PEL+PAPAPGKHKHRR HKHKKHQAPAPAP VPSPPAP
Sbjct: 121 LAPLLTPPTPMPSPPTPAPIAVPELAPAPAPGKHKHRRHHKHKKHQAPAPAPTVPSPPAP 180

Query: 181 PTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFN 225
           PTVVDSQDSTAPAPSPNLNGGDPMKGKV  T   V LG I LVAT GFN
Sbjct: 181 PTVVDSQDSTAPAPSPNLNGGDPMKGKV-ETCSRVVLGFIFLVATTGFN 224

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BLAST of Spg020856 vs. NCBI nr
Match: KGN61400.1 (hypothetical protein Csa_005957 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 5.5e-73
Identity = 186/232 (80.17%), Postives = 191/232 (82.33%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPT-VA 60
           MASKSW  F ICL FLF  +  QAPAQPPSLPT SPPP+T PPT  T PPLSTPPPT VA
Sbjct: 15  MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74

Query: 61  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 120
           PSTSPT+P   PPQSSPVSTPSLPPA PPPP TPPPLPPPLPPPQVSPTP   PPV  PT
Sbjct: 75  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134

Query: 121 LA--PLPTPPTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPP 180
           LA  PLPTPPTP PSP    PVAAPE SPAPAPGKHKHRRRHKHKKHQAPAPAP VPSPP
Sbjct: 135 LAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 194

Query: 181 APPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFNL 226
           APPTVVDSQDSTAPAPSP+LNGGDP+K KV G W  VGLG I LVAT GFNL
Sbjct: 195 APPTVVDSQDSTAPAPSPDLNGGDPVKRKV-GRWSKVGLGFIFLVATTGFNL 242

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BLAST of Spg020856 vs. NCBI nr
Match: XP_011649058.1 (lysine-rich arabinogalactan protein 19 [Cucumis sativus])

HSP 1 Score: 285.0 bits (728), Expect = 5.5e-73
Identity = 186/232 (80.17%), Postives = 191/232 (82.33%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPT-VA 60
           MASKSW  F ICL FLF  +  QAPAQPPSLPT SPPP+T PPT  T PPLSTPPPT VA
Sbjct: 1   MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 60

Query: 61  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 120
           PSTSPT+P   PPQSSPVSTPSLPPA PPPP TPPPLPPPLPPPQVSPTP   PPV  PT
Sbjct: 61  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 120

Query: 121 LA--PLPTPPTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPP 180
           LA  PLPTPPTP PSP    PVAAPE SPAPAPGKHKHRRRHKHKKHQAPAPAP VPSPP
Sbjct: 121 LAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 180

Query: 181 APPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFNL 226
           APPTVVDSQDSTAPAPSP+LNGGDP+K KV G W  VGLG I LVAT GFNL
Sbjct: 181 APPTVVDSQDSTAPAPSPDLNGGDPVKRKV-GRWSKVGLGFIFLVATTGFNL 228

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BLAST of Spg020856 vs. NCBI nr
Match: XP_008457186.2 (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 4.7e-72
Identity = 185/232 (79.74%), Postives = 190/232 (81.90%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPT-VA 60
           MASK W    ICL FLF  A+ QAPAQPPSLPT SPPPST PPT  TPPPLSTPPPT VA
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 61  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 120
           PSTSP +P   PPQSSPVSTPSLPPA PPPP TPPPLPPPLPPPQVSP P   PPV  PT
Sbjct: 61  PSTSPAIP---PPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPT 120

Query: 121 LAPLPTP--PTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPP 180
           LAPLP P  PTP PSP    PVA+PELSPAPAPGKHKHRRRHKHKKHQAPAPAP VPSPP
Sbjct: 121 LAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 180

Query: 181 APPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFNL 226
           APPTVVDSQDSTAPAPSP+L+ GDPMKGKV GTW  VGLG I LVAT GFNL
Sbjct: 181 APPTVVDSQDSTAPAPSPDLSRGDPMKGKV-GTWTKVGLGFIFLVATTGFNL 228

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BLAST of Spg020856 vs. NCBI nr
Match: XP_022158972.1 (lysine-rich arabinogalactan protein 19 [Momordica charantia])

HSP 1 Score: 264.6 bits (675), Expect = 7.7e-67
Identity = 178/232 (76.72%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPL-STPPP-TV 60
           MASKSWP+  I L FLF  A+GQAPAQPPSLPT S PPSTL PT  TPPPL STPPP  V
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 61  APSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVP 120
           APSTSPTVPPPQPPQ +PVSTPSLPP  PPPP TPPPLP   PPPQVSPTP+QAP VP P
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLP---PPPQVSPTPAQAPSVPAP 120

Query: 121 TLAPLPTPPTPVPSP----PVAAPEL--SPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSP 180
           TLAPLP PP P+P P    PVAAP L  SPAPAPGKH+H+R HKHKKH APAPAP +PSP
Sbjct: 121 TLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPAPAPAPTMPSP 180

Query: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFN 225
           PAPPTVVDSQDSTAPAPSPNLNGGDPM+GKV  TW  V LG IILVAT   N
Sbjct: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMEGKV-RTWTRVVLGFIILVATTSLN 228

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BLAST of Spg020856 vs. ExPASy Swiss-Prot
Match: Q9S740 (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 PE=2 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 109/227 (48.02%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 26  AQPPSLPTASPPPSTL--------PPTATTPP------------------PLSTPPPTVA 85
           A P +  T +PPP+T         PPT TTPP                  P S P P VA
Sbjct: 29  ASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVA 88

Query: 86  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 145
           P  SP  PPPQPPQS P S P++     PPPV+PPP P   PP   SP P+ A P P   
Sbjct: 89  PVISPATPPPQPPQSPPASAPTV----SPPPVSPPPAPTSPPPTPASPPPAPASPPP--- 148

Query: 146 LAPLPTPPTPVPSPPVAAP---ELSPAPAPGKHKHRRRHKHKK-HQAPAPAPAVPSPPAP 205
            AP   PP PV  PPV AP    L PAPAP   KH+R+HKHK+ H APAPAP  PSPP+P
Sbjct: 149 -APASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSP 208

Query: 206 PTVVDSQDSTAPAPSPNLNGG---DPMKGKVLGTWKGVGLGIIILVA 220
           P + D QD TAPAPSPN NGG   + +KG+ +  W   GL I+ L+A
Sbjct: 209 PVLTDPQD-TAPAPSPNTNGGNALNQLKGRAV-MWLNTGLVILFLLA 245

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BLAST of Spg020856 vs. ExPASy Swiss-Prot
Match: Q9C5S0 (Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 6.7e-05
Identity = 83/190 (43.68%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 3   SKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPP-TVAPS 62
           ++S+ I  IC+  +  +  GQAP  PP+  T +PP  T PP A TPPP+S PPP T +P 
Sbjct: 2   ARSFAIAVICIVLIAGVT-GQAPTSPPT-ATPAPPTPTTPPPAATPPPVSAPPPVTTSPP 61

Query: 63  TSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPTLA 122
              T PPP  P   PVS+P  PPAS PPP TPPP+  P PPP  SP P+  PPV  P  A
Sbjct: 62  PVTTAPPPANP-PPPVSSP--PPAS-PPPATPPPVASP-PPPVASPPPATPPPVATPPPA 121

Query: 123 PLPTPPTPVPSPPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTVVDS 182
           PL +PP  VP+P       SP+P                 +P+ +P +PS  AP     S
Sbjct: 122 PLASPPAQVPAPAPTTKPDSPSP-----------------SPSSSPPLPSSDAPG---PS 164

Query: 183 QDSTAPAPSP 192
            DS +PAPSP
Sbjct: 182 TDSISPAPSP 164

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BLAST of Spg020856 vs. ExPASy TrEMBL
Match: A0A0A0LHJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1)

HSP 1 Score: 285.0 bits (728), Expect = 2.7e-73
Identity = 186/232 (80.17%), Postives = 191/232 (82.33%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPT-VA 60
           MASKSW  F ICL FLF  +  QAPAQPPSLPT SPPP+T PPT  T PPLSTPPPT VA
Sbjct: 15  MASKSWSFFVICLAFLFSSSFAQAPAQPPSLPTVSPPPTTPPPTVATSPPLSTPPPTVVA 74

Query: 61  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 120
           PSTSPT+P   PPQSSPVSTPSLPPA PPPP TPPPLPPPLPPPQVSPTP   PPV  PT
Sbjct: 75  PSTSPTIP---PPQSSPVSTPSLPPALPPPPATPPPLPPPLPPPQVSPTPLPTPPVLAPT 134

Query: 121 LA--PLPTPPTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPP 180
           LA  PLPTPPTP PSP    PVAAPE SPAPAPGKHKHRRRHKHKKHQAPAPAP VPSPP
Sbjct: 135 LAPLPLPTPPTPTPSPPTPAPVAAPEPSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 194

Query: 181 APPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFNL 226
           APPTVVDSQDSTAPAPSP+LNGGDP+K KV G W  VGLG I LVAT GFNL
Sbjct: 195 APPTVVDSQDSTAPAPSPDLNGGDPVKRKV-GRWSKVGLGFIFLVATTGFNL 242

[Close]

BLAST of Spg020856 vs. ExPASy TrEMBL
Match: A0A1S3C506 (lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.3e-72
Identity = 185/232 (79.74%), Postives = 190/232 (81.90%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPT-VA 60
           MASK W    ICL FLF  A+ QAPAQPPSLPT SPPPST PPT  TPPPLSTPPPT VA
Sbjct: 1   MASKLWSFSVICLAFLFSSAIAQAPAQPPSLPTVSPPPSTPPPTVPTPPPLSTPPPTVVA 60

Query: 61  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 120
           PSTSP +P   PPQSSPVSTPSLPPA PPPP TPPPLPPPLPPPQVSP P   PPV  PT
Sbjct: 61  PSTSPAIP---PPQSSPVSTPSLPPAFPPPPATPPPLPPPLPPPQVSPIPLPTPPVLAPT 120

Query: 121 LAPLPTP--PTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPP 180
           LAPLP P  PTP PSP    PVA+PELSPAPAPGKHKHRRRHKHKKHQAPAPAP VPSPP
Sbjct: 121 LAPLPLPTSPTPTPSPPTPAPVASPELSPAPAPGKHKHRRRHKHKKHQAPAPAPTVPSPP 180

Query: 181 APPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFNL 226
           APPTVVDSQDSTAPAPSP+L+ GDPMKGKV GTW  VGLG I LVAT GFNL
Sbjct: 181 APPTVVDSQDSTAPAPSPDLSRGDPMKGKV-GTWTKVGLGFIFLVATTGFNL 228

[Close]

BLAST of Spg020856 vs. ExPASy TrEMBL
Match: A0A6J1DYJ7 (lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC111025417 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 3.7e-67
Identity = 178/232 (76.72%), Postives = 187/232 (80.60%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPL-STPPP-TV 60
           MASKSWP+  I L FLF  A+GQAPAQPPSLPT S PPSTL PT  TPPPL STPPP  V
Sbjct: 1   MASKSWPVLVIWLAFLFYPAIGQAPAQPPSLPTTSSPPSTLAPTVATPPPLSSTPPPNVV 60

Query: 61  APSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVP 120
           APSTSPTVPPPQPPQ +PVSTPSLPP  PPPP TPPPLP   PPPQVSPTP+QAP VP P
Sbjct: 61  APSTSPTVPPPQPPQITPVSTPSLPPTLPPPPATPPPLP---PPPQVSPTPAQAPSVPAP 120

Query: 121 TLAPLPTPPTPVPSP----PVAAPEL--SPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSP 180
           TLAPLP PP P+P P    PVAAP L  SPAPAPGKH+H+R HKHKKH APAPAP +PSP
Sbjct: 121 TLAPLPNPPAPLPPPPTPAPVAAPVLVPSPAPAPGKHRHKRHHKHKKHPAPAPAPTMPSP 180

Query: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFN 225
           PAPPTVVDSQDSTAPAPSPNLNGGDPM+GKV  TW  V LG IILVAT   N
Sbjct: 181 PAPPTVVDSQDSTAPAPSPNLNGGDPMEGKV-RTWTRVVLGFIILVATTSLN 228

[Close]

BLAST of Spg020856 vs. ExPASy TrEMBL
Match: A0A6J1IGY8 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC111472835 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.9e-64
Identity = 173/241 (71.78%), Postives = 186/241 (77.18%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPTVAP 60
           MASKS P+  ICL FLFPLA+ QAPAQPPSLPTA+PPPST PPT T  P    PP   AP
Sbjct: 1   MASKSCPLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITP----PPNVAAP 60

Query: 61  STSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPL------PPPLPPPQVSPTPSQAPP 120
           S +PT+PPPQPPQ+ PVSTPSLPP  PPPPVTPPPL      PPPLPPP  +P P   PP
Sbjct: 61  SITPTIPPPQPPQTPPVSTPSLPPVLPPPPVTPPPLPPPPATPPPLPPPPATP-PPLPPP 120

Query: 121 VPVP-------TLAPLPTPPTPVPS----PPVAAPELSPAPAPGKHKHRRRHKHKKHQAP 180
           +P P        +APLPTPPTPVPS     PVA PEL+PAPAPGKHKHRRRHKHKKHQAP
Sbjct: 121 LPAPQISPTPLQIAPLPTPPTPVPSRPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAP 180

Query: 181 APAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGF 225
           APAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMK KV GTW  + LG II+VAT  F
Sbjct: 181 APAPAVPSPPAPPTVVDSQDSTAPAPSPNLNGGDPMKEKV-GTWARIVLGFIIVVATTAF 235

[Close]

BLAST of Spg020856 vs. ExPASy TrEMBL
Match: A0A6J1EVZ4 (lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC111436552 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.5e-63
Identity = 172/239 (71.97%), Postives = 183/239 (76.57%), Query Frame = 0


Query: 1   MASKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPPTVAP 60
           MASKS  +  ICL FLFPLA+ QAPAQPPSLPTA+PPPST PPT T  P    PP   AP
Sbjct: 1   MASKSCHLLVICLAFLFPLAISQAPAQPPSLPTATPPPSTPPPTITITP----PPNVAAP 60

Query: 61  STSPTVPPPQPPQSSPVSTPSLPPASPPPPV----------TPPPLPPPLPPPQVSPTPS 120
           S +PT+PPPQPPQ+ PVSTPSLPP  PPPPV          TPPPLPPPLP PQ+SPTP 
Sbjct: 61  SIAPTIPPPQPPQTPPVSTPSLPPVFPPPPVTPPPLPPPPATPPPLPPPLPAPQISPTPL 120

Query: 121 QAPPVPVPTLAPLPTPPTPVPSP----PVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPA 180
           Q        +APLPTPPTPVPSP    PVA PEL+PAPAPGKHKHRRRHKHKKHQAPAPA
Sbjct: 121 Q--------VAPLPTPPTPVPSPPMLAPVAVPELAPAPAPGKHKHRRRHKHKKHQAPAPA 180

Query: 181 PAVPSPPAPPTVVDSQ-DSTAPAPSPNLNGGDPMKGKVLGTWKGVGLGIIILVATAGFN 225
           PAVPSPPAPPTVVDSQ DSTAPAPSPNLNGGDPMK KV G W  V LG II+VA+  FN
Sbjct: 181 PAVPSPPAPPTVVDSQDDSTAPAPSPNLNGGDPMKEKV-GRWARVVLGFIIVVASTAFN 226

[Close]

BLAST of Spg020856 vs. TAIR 10
Match: AT1G68725.1 (arabinogalactan protein 19 )

HSP 1 Score: 104.0 bits (258), Expect = 1.6e-22
Identity = 109/227 (48.02%), Postives = 127/227 (55.95%), Query Frame = 0


Query: 26  AQPPSLPTASPPPSTL--------PPTATTPP------------------PLSTPPPTVA 85
           A P +  T +PPP+T         PPT TTPP                  P S P P VA
Sbjct: 29  ASPVTSTTTAPPPTTAAPPTTAAPPPTTTTPPVSAAQPPASPVTPPPAVTPTSPPAPKVA 88

Query: 86  PSTSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPT 145
           P  SP  PPPQPPQS P S P++     PPPV+PPP P   PP   SP P+ A P P   
Sbjct: 89  PVISPATPPPQPPQSPPASAPTV----SPPPVSPPPAPTSPPPTPASPPPAPASPPP--- 148

Query: 146 LAPLPTPPTPVPSPPVAAP---ELSPAPAPGKHKHRRRHKHKK-HQAPAPAPAVPSPPAP 205
            AP   PP PV  PPV AP    L PAPAP   KH+R+HKHK+ H APAPAP  PSPP+P
Sbjct: 149 -APASPPPAPVSPPPVQAPSPISLPPAPAPAPTKHKRKHKHKRHHHAPAPAPIPPSPPSP 208

Query: 206 PTVVDSQDSTAPAPSPNLNGG---DPMKGKVLGTWKGVGLGIIILVA 220
           P + D QD TAPAPSPN NGG   + +KG+ +  W   GL I+ L+A
Sbjct: 209 PVLTDPQD-TAPAPSPNTNGGNALNQLKGRAV-MWLNTGLVILFLLA 245

[Close]

BLAST of Spg020856 vs. TAIR 10
Match: AT2G14890.2 (arabinogalactan protein 9 )

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 83/190 (43.68%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 3   SKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPP-TVAPS 62
           ++S+ I  IC+  +  +  GQAP  PP+  T +PP  T PP A TPPP+S PPP T +P 
Sbjct: 2   ARSFAIAVICIVLIAGVT-GQAPTSPPT-ATPAPPTPTTPPPAATPPPVSAPPPVTTSPP 61

Query: 63  TSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPTLA 122
              T PPP  P   PVS+P  PPAS PPP TPPP+  P PPP  SP P+  PPV  P  A
Sbjct: 62  PVTTAPPPANP-PPPVSSP--PPAS-PPPATPPPVASP-PPPVASPPPATPPPVATPPPA 121

Query: 123 PLPTPPTPVPSPPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTVVDS 182
           PL +PP  VP+P       SP+P                 +P+ +P +PS  AP     S
Sbjct: 122 PLASPPAQVPAPAPTTKPDSPSP-----------------SPSSSPPLPSSDAPG---PS 164

Query: 183 QDSTAPAPSP 192
            DS +PAPSP
Sbjct: 182 TDSISPAPSP 164

[Close]

BLAST of Spg020856 vs. TAIR 10
Match: AT2G14890.1 (arabinogalactan protein 9 )

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 83/190 (43.68%), Postives = 104/190 (54.74%), Query Frame = 0


Query: 3   SKSWPIFAICLTFLFPLALGQAPAQPPSLPTASPPPSTLPPTATTPPPLSTPPP-TVAPS 62
           ++S+ I  IC+  +  +  GQAP  PP+  T +PP  T PP A TPPP+S PPP T +P 
Sbjct: 2   ARSFAIAVICIVLIAGVT-GQAPTSPPT-ATPAPPTPTTPPPAATPPPVSAPPPVTTSPP 61

Query: 63  TSPTVPPPQPPQSSPVSTPSLPPASPPPPVTPPPLPPPLPPPQVSPTPSQAPPVPVPTLA 122
              T PPP  P   PVS+P  PPAS PPP TPPP+  P PPP  SP P+  PPV  P  A
Sbjct: 62  PVTTAPPPANP-PPPVSSP--PPAS-PPPATPPPVASP-PPPVASPPPATPPPVATPPPA 121

Query: 123 PLPTPPTPVPSPPVAAPELSPAPAPGKHKHRRRHKHKKHQAPAPAPAVPSPPAPPTVVDS 182
           PL +PP  VP+P       SP+P                 +P+ +P +PS  AP     S
Sbjct: 122 PLASPPAQVPAPAPTTKPDSPSP-----------------SPSSSPPLPSSDAPG---PS 164

Query: 183 QDSTAPAPSP 192
            DS +PAPSP
Sbjct: 182 TDSISPAPSP 164

The following BLAST results are available for this feature:

BLAST of Spg020856 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875574.1	4.8e-77	82.10	lysine-rich arabinogalactan protein 19-like [Benincasa hispida]	[more]
KGN61400.1	5.5e-73	80.17	hypothetical protein Csa_005957 [Cucumis sativus]	[more]
XP_011649058.1	5.5e-73	80.17	lysine-rich arabinogalactan protein 19 [Cucumis sativus]	[more]
XP_008457186.2	4.7e-72	79.74	PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo]	[more]
XP_022158972.1	7.7e-67	76.72	lysine-rich arabinogalactan protein 19 [Momordica charantia]	[more]

BLAST of Spg020856 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S740	2.3e-21	48.02	Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana OX=3702 GN=AGP19 ...	[more]
Q9C5S0	6.7e-05	43.68	Classical arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=AGP9 PE=1...	[more]

BLAST of Spg020856 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHJ4	2.7e-73	80.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G115750 PE=4 SV=1	[more]
A0A1S3C506	2.3e-72	79.74	lysine-rich arabinogalactan protein 19 OS=Cucumis melo OX=3656 GN=LOC103496925 P...	[more]
A0A6J1DYJ7	3.7e-67	76.72	lysine-rich arabinogalactan protein 19 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1IGY8	3.9e-64	71.78	lysine-rich arabinogalactan protein 19-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EVZ4	2.5e-63	71.97	lysine-rich arabinogalactan protein 19-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Spg020856 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68725.1	1.6e-22	48.02	arabinogalactan protein 19	[more]
AT2G14890.2	4.7e-06	43.68	arabinogalactan protein 9	[more]
AT2G14890.1	4.7e-06	43.68	arabinogalactan protein 9	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 147..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..200
None	No IPR available	PANTHER	PTHR36549:SF3	LYSINE-RICH ARABINOGALACTAN PROTEIN 19	coord: 1..220
IPR038793	Lysine-rich arabinogalactan protein 19	PANTHER	PTHR36549	LYSINE-RICH ARABINOGALACTAN PROTEIN 19	coord: 1..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020856.1	Spg020856.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane