Spg020774 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCCGAAACTCATGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCATAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGTCAAAACCCCACATTTCTCATTCCTGAGCAAGTCCACTCATATGCACAACAGGGGCAATATAAGGTCGATCCCATTCGCAAGTCAGGAAATTTGGGAAACGGGCTAGAGAATAGTGAAAACACTGCATATAAAGGGAAATTGGATTTCTTAGAGGAAAGATTGAGGGCAATAGAGGGTGCTGACGCATTTGGGAGCATAAATGCAACACAACTATGTTTGGTTCCTGATGTTGTTATTCCTCAAAAATTCAAGTTACCCGAGTTCGAGAAGTATGATGGGACATCTTGTCCAAGAAACCATTTGATTATGTATTGCAGGAAGATGGCTGCACACGTCCAAGATGAAAAGTTACTTATGCATTTTTTTCAAGATAGTTTGACAGGACCAGCATCCCGATGGTACGTACAATTGAATAGAGCTCATGTTCAGAAGTGGAAGGACCTGGCAGATCTTTTTCTCAAACAATATAAACATAATCTGGATATGGCTCCAGACCGTTTAGATCTCCAACGACTAGAAAAGAAGAGTACTGAGAATTTTAAGGAGTATGCGCAAAGATGGAGAGAAATGGCAGCCCAAATTCAACCGCCACTTACAGATAAAGAATTAACGACCATGTTCATACATACGCTTCGATCCCCTTACTACGATCGTATGATTGGGAACGCTTCCACGAATTTTTCAGATATCATAACTATCGGAGAAAGAATCGAGTATGGAGTGAAATATGGAAAATTTGTTGACACAGTATCAGACTCGAACCAGAAAAAAAGTATTCTTCCAAAAAAGAAAGAGGGTGAAGTCCATGAGATAAGTTATAGCCAGAAGCTACCATTTAGCAGTCAAACGATGGTACACCACCCAGCAACAAATAACATGAACCAGAGTTCATATAATAACTCATATGTGTCAAGACAGGGTCGTCAGACGGTACAGGGACAAATGAATTATTCATCAGGTGCTCAAAATTCCAACCCGTCGGGTGCTCAACGAGTTTTTAGAAGCAATTTGAGGAGCTTTGATCCCATCCCTGTAACTTATACAGAGCTTCTCCCCCAGTTGATTCAAAATAAGCAGCTTGTTCCAATACATGTGGAACCTGTGCAACCACCATACCAAAAATGGTACAAGCCAAATGCAAGATGTGACTATCATTCGGGAGCAGTGGGACATTCAACAGAAAATTGTTTTACTCTCAAGGGAAAGGTGCAAGATTTGATAAGATCCGGTTGGCTGAAATTTAAAAAGGCAGAAGAGGCACCAGATGTCACACAAAATCCACTCCCTAATCATGGCAACCCAGCAGTCAATGCCATTCATGTCTCATCAGAATGTGAAGGAGAGTCGAACTTTGTATATCAATGTTCAAAGGATGATTGTTTATCCTACAGTGAAGTAGTGATGTGCTTAATGCAGGAAAAGGAACCGGAAATTCATTCTGTAAACATGATCATTGGAGAAGATACCTCAGTAAAAGATTTATGTAAGCCAAAACCCCTGGTAATATTTTTTAAGGAACAACTTTCAGGTGTCCAAACTGATTTGACCATCTCACAACCGTTAACTATCCAAATCCCTAGTTCTTACAAATATAAAGACAACAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCGTCACCAACATTTCGGGAATCAGTGGTATGACAAGGAGTGGAAGGTGCTATAAGCCAGAAATCTTAAAGGCACCACCAGTGGAAAGCCAACAAAAGCTCCAAGTTGAAAAAGGAAAAGAGAAGGAATATTTTATAGAAGATCAAGAGGAAATTTGGAGTGAAGAGCCTATCATAACTAAGGGTAGCTCATCCAAGAAAGTTGTATCTGATGAAGAGGCTTGTGAATTCTTGAAGCTGATCAAGCACAGTGAATATAAGGTGATCGAACAACTGCATCGCACACCAGCTCGCATATCCATATTGTCACTGTTCTTAAATTCAGAGCCACACCGTAAAGCTTTAATGGATGTTTTGAACCAAGCACATGTGAATCATGACATCACTGTAGAAAAGTTGGGTGGAATTGTGGGAAACATCACTGCTTCCAACACTATTACTTTTACAGACGAAGAGATTCCACCAGAAGGTATGGGTCATACTAAAGCACTGCACATAGTTGTAAAGTGCAAAGATTATGCGATAGCTAAAGTCCTTGTTGATAATGGGGCCTCTTTAAACGTGATGCCAATGTCCACACTACTAAAGCTACCTGTAGATCCATCCCATATTAAACACAGTAGCACTGTAGTAAGAGCTTTCGACGGGACTCGTAGAGAAGTCGTGGGCGAAATTGAATTACCCATTAAAATTGGACCTCGCACCTTCAACGTGACATTTCAAGTGATGGACATAACTTCGGCCTATAGTTGTCTATTGGGGAGGCCTTGGATTCATTCAGCTGGGGTTATTCCATCAACTCTGCATCAGCGATTAAAGTTTGTTTTCGAGAATACTCTGGTGAGCATATTCGGCCAGGAAGATGTGTTGGTCACTAAACCTACTGCAACCCCTTATGTGGAGGCAGCAGAAGAAGCTTTGGAATGTTCTTTCCAATCTTTTGAGATAGCAAATGCTACTATTTTTACCCATGCTGAGGATCGAGGTCTAGAACAGTCTTTGTCAAGAGCTTCAATGATGGTTGCAAAAACTATGATGAAAGAAGGATTTGAACCTGGTGAAGGCCTAGGAAAATATCAACAAGGGAGAAAACAACCAATATGTCTGCCCAAGGCTGTTGAAAAGTTCGGTTTAGGTTATAAGCCAACTGCTGTGGACTGGAAGAATGTCCAAGAAGAAAAAAGAAAGCAAAGGAGCGCCAGATTAGAAAATCGAGAAGTAAGTACCAAGAGAATGAGCATACCCCATCTCTATGAGACTTTTAAGAAGAGCAAAGCCGAAGCAGACAAGTTAGTATTAGAGATGTCAGATTTATCCATCACCGCCATCATGGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAATTGGGAATCCACAGAATTGCCTATTCATTTTGAAGAAGCCCAAGAGTAA ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCCGAAACTCATGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCATAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGTCAAAACCCCACATTTCTCATTCCTGAGCAAGTCCACTCATATGCACAACAGGGGCAATATAAGGGTCGTCAGACGGTACAGGGACAAATGAATTATTCATCAGGTGCTCAAAATTCCAACCCGTCGGGTGCTCAACGAGTTTTTAGAAGCAATTTGAGGAGCTTTGATCCCATCCCTGAAAAGGAACCGGAAATTCATTCTGTAAACATGATCATTGGAGAAGATACCTCAGTAAAAGATTTATGTAAGCCAAAACCCCTGGTAATATTTTTTAAGGAACAACTTTCAGGTGTCCAAACTGATTTGACCATCTCACAACCGTTAACTATCCAAATCCCTAGTTCTTACAAATATAAAGACAACAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCGTCACCAACATTTCGGGAATCAGTGCCGAAGCAGACAAGTTAGTATTAGAGATGTCAGATTTATCCATCACCGCCATCATGGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAATTGGGAATCCACAGAATTGCCTATTCATTTTGAAGAAGCCCAAGAGTAA ATGTCAAAAATCCTGGAGATCCTTACTGCGCAAAAGGGGAAATCTACGGCCGAAACTCATGAACTAGAAGATGTTGCACCTCCAGGTTTTACCCCATCAGTACCTCAGCATAGCGGGGCATCGGCTACATCTGTACAACCGATATTCTATACTCATGCACCTCAAATGCCTCCATTAGGAGGAGGGGCAGGTCAAAACCCCACATTTCTCATTCCTGAGCAAGTCCACTCATATGCACAACAGGGGCAATATAAGGGTCGTCAGACGGTACAGGGACAAATGAATTATTCATCAGGTGCTCAAAATTCCAACCCGTCGGGTGCTCAACGAGTTTTTAGAAGCAATTTGAGGAGCTTTGATCCCATCCCTGAAAAGGAACCGGAAATTCATTCTGTAAACATGATCATTGGAGAAGATACCTCAGTAAAAGATTTATGTAAGCCAAAACCCCTGGTAATATTTTTTAAGGAACAACTTTCAGGTGTCCAAACTGATTTGACCATCTCACAACCGTTAACTATCCAAATCCCTAGTTCTTACAAATATAAAGACAACAAAGCAGTACCATGGAATTATGGTTGTCATGGCCTCAATGAAGAAGCTGCTATCGTCACCAACATTTCGGGAATCAGTGCCGAAGCAGACAAGTTAGTATTAGAGATGTCAGATTTATCCATCACCGCCATCATGGAAGAACATGTGGAATCTGTAGATTCCTTGGTATACAAGTGCCCTCCAGGTTTCGAACTATGCAATTGGGAATCCACAGAATTGCCTATTCATTTTGAAGAAGCCCAAGAGTAA MSKILEILTAQKGKSTAETHELEDVAPPGFTPSVPQHSGASATSVQPIFYTHAPQMPPLGGGAGQNPTFLIPEQVHSYAQQGQYKGRQTVQGQMNYSSGAQNSNPSGAQRVFRSNLRSFDPIPEKEPEIHSVNMIIGEDTSVKDLCKPKPLVIFFKEQLSGVQTDLTISQPLTIQIPSSYKYKDNKAVPWNYGCHGLNEEAAIVTNISGISAEADKLVLEMSDLSITAIMEEHVESVDSLVYKCPPGFELCNWESTELPIHFEEAQE Homology
BLAST of Spg020774 vs. NCBI nr
Match: XP_022157707.1 (uncharacterized protein LOC111024360 [Momordica charantia]) HSP 1 Score: 106.7 bits (265), Expect = 3.2e-19 Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Spg020774 vs. NCBI nr
Match: XP_022157707.1 (uncharacterized protein LOC111024360 [Momordica charantia]) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-09 Identity = 42/90 (46.67%), Postives = 49/90 (54.44%), Query Frame = 0
HSP 2 Score: 59.7 bits (143), Expect = 4.5e-05 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Spg020774 vs. NCBI nr
Match: KAA0046213.1 (uncharacterized protein E6C27_scaffold284G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 59.3 bits (142), Expect = 5.8e-05 Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 0
BLAST of Spg020774 vs. NCBI nr
Match: KAA0037621.1 (uncharacterized protein E6C27_scaffold277G002820 [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 7.6e-05 Identity = 37/117 (31.62%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of Spg020774 vs. NCBI nr
Match: KAA0036942.1 (uncharacterized protein E6C27_scaffold86G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 58.9 bits (141), Expect = 7.6e-05 Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0
BLAST of Spg020774 vs. ExPASy TrEMBL
Match: A0A6J1DV70 (uncharacterized protein LOC111024360 OS=Momordica charantia OX=3673 GN=LOC111024360 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-19 Identity = 56/120 (46.67%), Postives = 77/120 (64.17%), Query Frame = 0
BLAST of Spg020774 vs. ExPASy TrEMBL
Match: A0A6J1DV70 (uncharacterized protein LOC111024360 OS=Momordica charantia OX=3673 GN=LOC111024360 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.5e-10 Identity = 42/90 (46.67%), Postives = 49/90 (54.44%), Query Frame = 0
HSP 2 Score: 59.7 bits (143), Expect = 2.2e-05 Identity = 30/78 (38.46%), Postives = 46/78 (58.97%), Query Frame = 0
BLAST of Spg020774 vs. ExPASy TrEMBL
Match: A0A5A7TRL7 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold284G00010 PE=4 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.8e-05 Identity = 37/117 (31.62%), Postives = 59/117 (50.43%), Query Frame = 0
BLAST of Spg020774 vs. ExPASy TrEMBL
Match: A0A5A7V3W7 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002400 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.7e-05 Identity = 33/104 (31.73%), Postives = 56/104 (53.85%), Query Frame = 0
BLAST of Spg020774 vs. ExPASy TrEMBL
Match: A0A5A7T0H8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00180 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.7e-05 Identity = 31/86 (36.05%), Postives = 48/86 (55.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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