Spg020744 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020744
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold10: 26966490 .. 26971655 (-)
RNA-Seq ExpressionSpg020744
SyntenySpg020744
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAGGATAAGAAGGAGGGAGCAGCGTAGACAGAAAAATCAAATGGTTGACGTGCCGCATCTACCGCAGGGTCCTGAAGATCCAGCGAACCCCCAGCAGAATCGTGTGCTGCAGCAAAACCCACCGCTAGAGCAAAATGAGCAGCAAAATAATCAGGCTGAGAATCCTATCTTGGTAGCGAACGATAGGACCAGAGCCATTCGAGCATATGCTTTTCCAATGTTTGATGAGTTGAATCCAGGGATTGCACGTCCTCAAATTCAAGCGGCTAATTTTGAAATGAAACCGGTAATGTTTCAGATGTTGCAAACCATGGGTCAATTCCATGGTTTGTCATCTGAAGACCCTCATTTACATCTTAAGTCTTTTCTAGGAGTTAGTGATTCTTTTGTAATTCAAGGAGTGCCTAGAGATGCTCTTAGATTAACTTTGTTCTCGTATTCTCTTAGAGATGGAGCGAAGGCGTGGTTAAACTCTTTTACTCCATGATCAATTAGGACATGGGATGAGTTAGCTGAAAAAATTTTTAGTAAATATTTCCCACCTAATAGAAATGCTAAATTAAGGAGTGAAATAGTAGGGTTTAGGCAACTTGAAGATGAGACTTTTAGTGAGGCTTGGGAGAGGTTTAAGGAGCTTTTGCGAAAGTGTCCCCACCATGGCCTACCACATTGTATTCAAATGGAAACATTTTACAATGGATTAAATGCGGTAACTCAAGGTATGGTTGATGCTTCGGCTGGAGGGGCCCTTTTAGCAAAAACTTTTAACGAAGCCTATGAAATTTTAGAAAGAATATCTACTAATAGTTGTCAGTGGTCGGATGTTAGAGGCACAAATAAAAAGGTTAAGAGTGTATTAGAAGTTGATGGTGTGTCCACCATTAGGGTTGATCTTGCAATGATTGCTAACGCTCTTAAGAATGTGACAGTGATTAGTCATCAGCAGCCGCCAGTTGCGGAGCCTGCTGCGGTGGTGAACCAAGTTGCAGAGGAAGCTTGTGTCTATTGTGGTGAAGATCACAACTACGAGTTTTGCCCCAGCAATCCAGCTTCTGTGTTTTTTGTAGGTAATTAGAGGAATAACCCTTATTCTATCTTTTATAATCCAGGTTGGCGCAACCACCCCAACTTCGCGTGGGGAGGACAAGGGAGTAATGTGCAAGCACAGCAGAAAGTAAACCAGCCGGGATTTGCTAAAGCGCAGGTATTGCCCCAGCAAAATAAGCAAGCTTTGCCCCAGCAAAATTCGGGGAATTCTCTCGAGGCAATGATGAAAGAATTTATGGCTCGTACAGAAGCCGCAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCCAATGAGCTGAAGGCAAGGCCTCAAGGGAAACTTCCCTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTGACTCTTAGGAGTGGTAAGCCACTAGAAGAAAGAAAAGAGCCTAGTAAAACCGAGGATATAGATAATAATTGTGATAGAAATGTTGTTGTTGTTGAGAAAGAGTTGGAGTCTGGTCAGGGTGCTGGAGGCAGCAATAAAGATGCTGGAGCATCTGGTTCTGTTCCAGATGTGGAACCACCTTATGTGCCGCCCCCACCTTATGTACCACCTCTACCTTTTCCACAAAGGCAAAGGCCTAAGAATCAGGATGGTCAATTTAAAAAGTTTTTAGAGATTCTTAAGCAATTGCATATAAATATCCCTTTAGTAGAAGCTATAGAGCAAATGCCTAATTATGCTAAATTTCTTAAGGATATGTTAACTAAAAAGAAGAGGTTAGGTGAGTTTGAAACTGTATCTCTTACTGAGGAATGTAGTGCTATTCTTAAGAATGGGCTACCACCCAAGGCTAAGGATCCAGGATCATTCACTATACCTGTGTCAATAGGTGGAAAAGAGTTAGGTAGAGCACTCTGTGATTTAGGTGCAAGCATTAACCTTATGCCTCTTTCGGTCTATCGGAAGCTAGGTATTGGTGAAGCTAGGCCCACCACAGTCACACTCCAACTAGCTGATAGGTCTATCACATATCCAGAGGGTAAAATTGAGGATGTCTTAGTGAAAGTAGATAAATTCATATTTCCTGTTGATTTTATTATCTTAGACTATGAGGCTGATAGAGATGTCCCAATTATTCTAGGTCGTCCATTTTTTGCTACTGGTAGGGCGTTAATAGATGTTCAAAGAGGGGAATTAACAATGAGAGTCTGTAATGAGGAAGTAAAATTTAATGTGTTTAAGGCCATGAAGTATCCAGACGAGATGGAAGATTGCTCTTTCATTAGGATTCTGGAGAACACAATTGTTGAGACAGCAATTCAGGATTCGACCAACAAACATTTGGAAGATCATGGAGAGGTTAGTGTAGAGGATTTAGAAGTTTGTTCTTTAGAAAGAAAAAATGAAAAAGAAGTGTCGGGGTGTGAGGATGTTTTTGAGTCTTTGGATTTGGATGAAAGGAAAGCTCCTCCTATTAAACCATCCCTGATTGAGGCACCCACTTTAGATTTGAAGCCCTTGCCGGATCATCTAAAGTATGTGTATCTTGGGGAAGGTGAGACGTTGCCCATTATTGTTGCATCAGATTTAATGTCGGAGGATGAAGAAGCCTTAATAAAGTTGCCTTTGTGTATTCTTCTCAAATCAGTGTTCCAAGTGTGCTTCATTGATGAACGGTTATTTACAGTAGCTCATATTAAGGCAGTGAAAACACCTTGGTATGATGACATTTCCAATAACCTTGATTTTGGAAATTTGCCTCCTGGTTTATCAAAAGAACAGATGAAAGAATTTTTCCATGAGGTGAAGTTTTATTTATCGAATGATGCATCTGTGGTTAGACAATGTGTTGATGATGGCTGTGAGTTTAAAGAAGGGCAGCGAATAGAGCATTACTGGAGGGAGGAGTTTCGTTCGAAATATCTCTCTCTGAAATTGCTGGCAAATTAGGGGAGCACAGGTTTTGCGGGAGCAGTTCTTATTGCAATATTTTTAGCTCCCAGAATTAGTTGCGATTTTATCTTGTGGATTTTGTTTGATTCTGATTTGAATTATTTTAAAATTGGATTTTATTGATTTCAATTTTATGTGATTCATTGGAATATTTTTGTAGATTTTATTTTCAGTTTATTTAGTTGTATTTATCGTTAATTTAATTGCTTTAATCGGCTTAATTAGTTTAGATTTTAGGTTGTATTTCAGTTATTTAAATTTCTGTTTAGATTAGATTTGAATAAAATTTCTCCTTATTTATTCGGTTTTGAATATTAAAAATAAAAAGATTTGATTTGAGCGGTTAAATTTGAATTTCCTGATTTGATTTTGTATCCGAGATTTTTCTGGAAAATAATCTTGTGTTCAGAAAGATGTTGCGGCAAAGTTATGGCTGAAGCAAATCTTCTGTCCGGATGGAAAGGGTTGTTGCGAAGTAATTACTTTTACCGTTTGAATTTTTGAATTTTCGTGTGCAGGAAATTACAGGAGGAATTATGATGCTGCCACGTGTCACGCAGGGGCAATCCAAGGGCTTAATCATTAGACAGCACATAATTATTTTCCATGGGCTGATTGGAATTCTGATTTTACCGTTTGTTGGTTTTAATTCCACTAAGCTGCATGCGATTTCAAACGGTAATGTTAATTAATGGAGCAAAATCTTCCTGTTAGGATTTTCTTTTGCTGAAGCCTTATTTATTGGCAACCCTCAGTACGTTTTTCTTACTTCATCTTCTTGCTTCGATCTTTTGCTTTCTTTTTCGCTTTCATTCTCTGTAAAACCCTTGAATCCTTCATGGCAAAAACAAGAGCAAGGAAAGAAAGAGAGAATGAGGAGGAGAGATACCGATTACTTCTGAGGTGCAGAAGGTAAAGACGAAGAAGAAAAAGACACCGGAGGAGAAGGCAACAGAGGGCCGAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAGCAGAGAGTCGCGGATACAGAAGAAGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCGAGAAGAAATTACAGAGGAAGTTCAAGAAAAGCAGGCCGAGGATGTGCAAGAGCAACAGGCAGAAGATGTTCAGGTAACGGATATTGAGCCAGTGCAGGAGGGTCGAGTGGAGGTGATCATGCCAGAAGTGCCCAAACGTCGCCGCGTGAAGCGAAAAGCGGGTCGTGTCAAGGTAGTCCGAACTGACACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAAAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAAGCCGAAGAAAAAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTTAAACGAAGAGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAACATGGTCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCCTTTGAAAGAGGATTTAGCGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAGACCATGGCTGGGAGTTGTTTTGTGCGAAGCCTGAGTCTGTAAACGCACAGGTGGTGTGTGAATTTTACGCTAATATAGACAAAGAAGATGGTTTCCAGGTGATTGTTCGAGGAGTCGAGGTAGACTGGAGTCCTAGTGCTATCAATGCACTGTATAACCTTCAGAATTTCCCCCATGCAGCTTATAATAAGATGGTTGTAGCACCATCTAATGAGTAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGCTGTCCAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTAAAGAGGGAAGCGAACACGTGGATGGGATTTATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTTAGCATTGATGTAGGGAAGATGATTGTTAATGAGATTTCTGGTTGTTAG

mRNA sequence

ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAGGATAAGAAGGAGGGAGCAGCGTAGACAGAAAAATCAAATGGTTGACGTGCCGCATCTACCGCAGGGTCCTGAAGATCCAGCGAACCCCCAGCAGAATCAAAGATGTTGCGGCAAAGTTATGGCTGAAGCAAATCTTCTGTCCGGATGGAAAGGGTTGTTGCGAAGATTTTCTTTTGCTGAAGCCTTATTTATTGGCAACCCTCAACGAAGAAGAAAAAGACACCGGAGGAGAAGGCAACAGAGGGCCGAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAGCAGAGAGTCGCGGATACAGAAGAAGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCGAGAAGAAATTACAGAGGAAGTTCAAGAAAAGCAGGCCGAGGATGTGCAAGAGCAACAGGCAGAAGATGTTCAGGTAACGGATATTGAGCCAGTGCAGGAGGGTCGAGTGGAGGTGATCATGCCAGAAGTGCCCAAACGTCGCCGCGTGAAGCGAAAAGCGGGTCGTGTCAAGGTAGTCCGAACTGACACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAAAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAAGCCGAAGAAAAAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTTAAACGAAGAGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAACATGGTCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCCTTTGAAAGAGGATTTAGCGGTGGTGTGTGAATTTTACGCTAATATAGACAAAGAAGATGGTTTCCAGGTGATTGTTCGAGGAGTCGAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGCTGTCCAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTAAAGAGGGAAGCGAACACGTGGATGGGATTTATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTTAGCATTGATGTAGGGAAGATGATTGTTAATGAGATTTCTGGTTGTTAG

Coding sequence (CDS)

ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATCGAGAGGACATTCAGGATAAGAAGGAGGGAGCAGCGTAGACAGAAAAATCAAATGGTTGACGTGCCGCATCTACCGCAGGGTCCTGAAGATCCAGCGAACCCCCAGCAGAATCAAAGATGTTGCGGCAAAGTTATGGCTGAAGCAAATCTTCTGTCCGGATGGAAAGGGTTGTTGCGAAGATTTTCTTTTGCTGAAGCCTTATTTATTGGCAACCCTCAACGAAGAAGAAAAAGACACCGGAGGAGAAGGCAACAGAGGGCCGAGGATCAGGAGGCTCTACAGAAAGCGACGGATGATGTGGCTGCCACAGTAGTTGAAGAAAACCCGAAAGAACCAGAAGAACAGAACCTAGAACAGACTGAGCAGAGAGTCGCGGATACAGAAGAAGTTCAAGAGGAGCAAACAGAGGAAGTTCGAGAGGAAAATACCGAGGAAGTTCGAGAAGAAATTACAGAGGAAGTTCAAGAAAAGCAGGCCGAGGATGTGCAAGAGCAACAGGCAGAAGATGTTCAGGTAACGGATATTGAGCCAGTGCAGGAGGGTCGAGTGGAGGTGATCATGCCAGAAGTGCCCAAACGTCGCCGCGTGAAGCGAAAAGCGGGTCGTGTCAAGGTAGTCCGAACTGACACCCCCTCGCCTCCAACTACTGACTCTGAAAGAGAAAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAAGCCGAAGAAAAAGCAAGAGAAGAGGCAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTTAAACGAAGAGCGGAAAAGGGCAAAAGTGTTGCTGAAGCATCAGAAGAACACGATGAAATAGAAGAACATGGTCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTGCTGAAAAGAGACTTCCCTTTGAAAGAGGATTTAGCGGTGGTGTGTGAATTTTACGCTAATATAGACAAAGAAGATGGTTTCCAGGTGATTGTTCGAGGAGTCGAGTTAAGTGATGCTGTGCGGGAGGTGGGTATTGAAGGGGCACAGTGGCAGCTGTCCAAGACAGGGAAAAGGACATTTCAGTCAGCTTATCTAAAGAGGGAAGCGAACACGTGGATGGGATTTATCAGACAGAGGATGCTTCCAACGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTTAGCATTGATGTAGGGAAGATGATTGTTAATGAGATTTCTGGTTGTTAG

Protein sequence

MSDPPGVRFELDPEIERTFRIRRREQRRQKNQMVDVPHLPQGPEDPANPQQNQRCCGKVMAEANLLSGWKGLLRRFSFAEALFIGNPQRRRKRHRRRRQQRAEDQEALQKATDDVAATVVEENPKEPEEQNLEQTEQRVADTEEVQEEQTEEVREENTEEVREEITEEVQEKQAEDVQEQQAEDVQVTDIEPVQEGRVEVIMPEVPKRRRVKRKAGRVKVVRTDTPSPPTTDSERENAEKEEREKKEAEEKAREEAEKKAEEERLLKRRAEKGKSVAEASEEHDEIEEHGRFVNNFARAKYAELLKRDFPLKEDLAVVCEFYANIDKEDGFQVIVRGVELSDAVREVGIEGAQWQLSKTGKRTFQSAYLKREANTWMGFIRQRMLPTTHDSTVSRERVLLAFAILRSLSIDVGKMIVNEISGC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 125..175
NoneNo IPR availableCOILSCoilCoilcoord: 231..273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..179

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020744.1Spg020744.1mRNA