Spg020644 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020644
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold9: 18263948 .. 18277426 (-)
RNA-Seq Expression	Spg020644
Synteny	Spg020644

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGCGAAAAGGTTGATGCAATCATTGCCGCTTTAGAGAAGGGCAAAATGGTGGCAGATACGACTGCACCAGACACTCCGATTGGAAACCCTCAAGTTGGCCTACCATTTCCACCCAGGTTCGCTTCACATGTTCGTACGACAACAGAAGCGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTAAATCATTTAAAGAAGGCCAAATTCCCCAAATCCCCATGGCTAGCCAAGCTGGTGCTTCTTATTTCAAGCTAGAATTTTCAAAAATACCTTTTGCAGTCCCTAACTTGGATGACCCAGAAGTAAAGAAGGAGTTAGCCGCACCCTCTAATGAAAAACTTGAAGTTTTAGAGGAAAGGTTGAGGGCAGTCGAGGGCACTAGTGTTTTTGGGAACATGGATGCCACTCAATTATGTTTAGTTCCAGACGTTGTGATCCCACCGAAATTCAAACTTCCTGAATTTGAAAAATATAACGGGACGACGTGCCCTAAAAGTCACATTGTTATGTACTGTAGGAAGATGGCAGCACACGTTCATAATGAAAAGCTGCTCATACATTGTTTTCAGGATAGCCTAAAAGGTCCAACCGCCCGTTGGTATATGCAGTTGGATAGTTCACATGTGGTCACATGGAAGAACTTGGCTGATTCATTCCTCAAACAGTACAAACACAATATTGATTTGGCTCCCGACCGACTGGACTTACAAAGGATGGAAAAGAAGAGTACTGAAGACTTTAAGGATTATGCCCAAAGGTGGCGGGATATGGCAGCTCAGGTCCAACCCCCTTTAACAGATAAGGAGCTTTCATCCATGTTCATCAATACCCTAAGGTCCCCATTCTATGAACATATGGCTGGAAGCGCGTCGACCAATTTCTCCGATATCATGACAATTGGGGAAAGAATTGAGTACGGGATCAAACATGGTAGAATAGCCAAAGCCACTGAATCCTCAGGCACGAAGAAGGGCAATACTTCAAAGAAGAACGAGGGAGAAGTACAGATGATAGGGAAAGTGGATAAGTCCCATCGACAAATCCACCAACCCATGGCACAATATCCTTCGAATTATTTACCCACATACGGATACTATCCGCACCAGGTGAATAATACATCAACGCAGTACTCCCCATTTTATGGCCAAAATACCAGACCCCAAATGAATCAGAACTTTCAGTCTCGAAGGCAACAACAACCAGTCACTCCAGGTCAGCAAAATAATCGAGCACCTTATAAGCAAGCCCAATTTGATCCGATTCCGATGACATATACTGAGCTCTTGCCTCAGTTAATTTAGAACCATCAGTTGGCACCCAAGCCTGTTGCTCCACTGCAACCCTCTTATCCAAGATGGTATGACCCTAATGCAAGGTGTGATTACCATGCAGGTGTTGTTGGGCATTCTACAGAAAATTGCACTGCTTTGAAGTATAGGGTACAAGAGCTCATTAAGGCCAGATGGTTAAACTTTAAAAAGGAGAAGGGGCCCAATGTTGATAATAATCCTTTACCAAATCATCAGGTGAATGCAATAGATCAGTGTCAGGATATTATCAAGAAGATAGATGTTGCAGAGATCATGACTCCCAAGGAGAAGCTTTTTGAGATTCTCCTCATTAACGGATATGTATCAATTGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATTCTGGGGCAAAGAGACATTCTTTGGAACCATGTCATCATTTTCATAAAAGGGTCCAAGAACTGGTGGATTCAAAATTTCTTGTGGTTGCCCAAGCCCATCACCACGACAATGAAATAGGGGCCGTGGAAGAATTGATGCCTAAAGAAAATTTGAATCCATCTTTCAAACTAAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAGGTGCCAGCTCCTTTCAAGTACAAGAGTTCCAAGGCAGTACCATGGAGTTATGAGTACAAAGTAATTATTAACTCAAAAACGCCACCACTTCCAGTTAACAACATTTCCAGAACGGGAGGCGTAACACGGAGTGGGAAATGTTACACTCCAGATCAGTTATTGAAATGCTCAAAGAATACAATAGAAGAGAAGAATGAGAATGTTGAGAATAACATAGATAGCAATGTCAAGCCCAAAGAAACAACAGTGACGAAGAAACAAAGAGGCAAACAAACTGTGTCCGAAGAAGAAGCTCAAGAATTTCTAAAGTTGGTTAAGCAAAGTGAATACAAAGTAGTGGAACAGCTAGCTCAGACGCCTGCTAAGGTCTCCATATTATCTTTGTCGTTATCCTCTGATTCACATCGAGATACGATATTGGAAGCTTTGAATCAAGCATATGTTTCCAAGGACATCACTTCAGATGGTCTAGATAATATCGTGGGGAATATAACTGCTCACAACACCATAACTTTCACTGATGATGAGATACCGCCCGAAGGCACAGGACACACGAAGGCACTGCATATTTCAGTCAAGTGCAAGAACTTTTTAGTAGCAAAAGTCCTGGTGGATAATGGGTCTTCTTTGAACATAATGCCAAAATCAACATTGGAAAGATTGCCAGTGGATATGTCCCATATGAGGCCAAGTACTGTAGTAGTAAGGGCCTTCGATGGGGCACACAGTCAAGTGGTTGGTGACATTGAGATTCCAATACAAATCGGCCCATGCACATTTAACATAACCTTCCAAGTTATGGATATCCCCTCTGCTTACAGTTTCTTGTTAGGGCGGCCTTGGATACATTCTGCAGGAGCTGTCACATCATCGTTGCACTAGAAACTCAAATTTTCAATTGGAAGGAGCCTAGTAATTGTATCTGGTCAAGAGGATATCTTGGTTTCTAGGCTAGCTTCAATGCCATATATTGATGTAGTAGAGGAAGCTTTCGAGTCATCATTTCAAACATTTGAGGTAGCAAGTGCTACAACTCTATATGGGGAAAGCAAAAAATCTAAATCTCGATCTTCAGTCATGACGTTCAAGGAAAGCAACAGTCGTTTAGATGATGTTTTAAGCCTATCAAAATATACAAAAAGATTTGGGCTTCGGTATAAGCCGAATAAAGCAGATATGATCAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGCGAACCAGAAGATGGAGAAAAAGTCATTCCTCATCTCTATCACTCGTTTGAAAGTGCTGGTATAATTCGTTCAGGAGATTTTGCAGTTGCAACAGTGACTAAAGAGGAAGAATTGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTATTATTGAATTTCCGTTATTTGCTATTAAGATGTCAAAGTAATTGACCACTTTTTATCGTTTTTTGCAATTTCAATTTTCAATTTCAATTTAGGTTAGTCATTTTACTCATTTCATTTTCCAAACTTCTTTCTATGTGTTCAAGTAAATTTCATCATTCAATGAACATTTTAGTTCATTTCCTTTTGTTATTGCATATTACACTCTCCATGGCAAAATATTTACTCTTCTTTTCTTCTCTTTTCTCTTTATGTCAAATTATCAACATCTTGAGCAGTAATACTGAGATTGAATGTGCAAACGATTCTCATACGAACTTGATATTCCTATACACAATGTTGAGTCTGACGAGGAAGAAGAAGATTTTGAACCTAGTGCTGAGTTGTTAGAAATGATAGAGGAAGGGGAAAAAGCGTTGGGCCCCCATGAAGAGTTAATTGACCAATAATAGCAAGTTAGTCCTTCAAGAGTGTTCGTAACTCCAACGGGGTCAAATTACCGTTTTACCCCTAGGTTACCTCTACATCCTTAAGTACCAGTGCTCCTCTAATGTACAACCTGTTTGAGGTCCAACCAACAAACAGAAATCTATCTCGTGCCATCGAGAGGGCAAGGCCCTTTGTTCAAGACCCGGAGACACCACTTAAGGGAACCCTCATCTACTTACCATAGAGCCGGGAAGGAGTGAATTCCATCTTGTGAGATTATGTTCCCAGCTCTCCACTCGGTCTTGTCCCCAAGATGGTAGGCTTATTGAGTCGGCATGCAGGCCACTCTCACCCATACAAATCAAAGGACAATCCCTCGAGTATAGTGTCACTAGGATAAGGTACCTAGCATTATCCCTATACTATAGACCCTTTAGGCTGTAACTTGAACAATGATCTCCGTATGTCTCCATATGCAGTTCAAGTCTCATACAAACAAGCTAGGATGTTTAGTTTATTGGATTAGGGTTATTTAGGCAAGACAAACATAATACTAACAATAATAATTTATTGAATAATACATCAATATCTTTTTATTAATGTTTCGTCAAATGTTAAATTTACTATCAACGAGTTTTAGGGGATAAAACCCAACACATGTACCCCTACTATCCTCGGGAGTCACATGCCCACCAACTTCTGCCTTGGTTCGGTCTCCGAACCACATCCTATTGGGAGAGATTTCACTCTGATACCATCTATAACGCCCCAGGTTTAGAATTCAGATTTCACAACCTGTGCAACTGATAGGACCAAAATAGTCCTATTTATTTGTTGTTAATCTAGGCTTGTTAGGGTGCACTTTACGCTTTATTTGTCTGGTTTGTAGATAATTTGTGCATTCAAGGTATCAGGGTCGAACCACACAAATTGGAGTTAATTCGGGCAATTTAAGGAGTTTTTGAGCTTACTTGAGAGTCATGGATCTCGAGGAGGTGAGAAGACCTTGAGGATCGTGACGAGCCCGAAGAATAGTTCCAAGGAGTCAAAGGTTCGAGGGAAAATCGAGCAAGAAACGACGAGGAACAAAGTTGAAGCACGCTGAAAAGAGGCACGACGTCGAGAGGTCGTGGCCAGCGTCTCGACGCCAGCCCGTTTTCAGCCCGTGGCCGATATGGCACGACATCGAGATGCCATGCCCACCATCTCGACTCCACGACAATTTTTCCTATAAATCCCCTCTTTTATTTCCGTCAAATGTATGAACTTCCTAGAAGACCATAAGAGGTGTAAGTTTTCCTTTTGATTTCCTTTGTATTTTCTTGTTATTGAAGCGTGGAGTCGCGGGTTTTAGCCGACCTAACCGTCGTCTAAACCCGTTGACGCCGATTGGATGATTTTTGGGATATAGAATGTATTTCTTTGTGAGTTTCATGTTCTGAATGTCTATTTAATTCCATATTGCTATTGTATTCTGGATTTAGTTCGTATTATTTGCATGCACAATAGGTTAGATTGATGCCCTAACTCGCAGTTCGTATGTTAATAACTTGCTAAGAAATTGATTTCCAGGTAGCTAATGGAAAATTGGTTTAATAGTTAGCGCATAGACTGATTCGTGGGCACGGGTCCCAAGAGCAGACTCTGACTTTGTTGCTTGACACGATAGGTTTAGAATCCAAAATAGTGTTAGAAGTAATCTAGGCCTAATTATTTCTAATGTCCTAATCAATCCACTAGACTTAAGGCAATTGGTTGATTGTTTAATTTGATAGTCCAATTAAATTAATTGATTAACTAATTAGTGTCTAATTCGATGGACGTTGTATGATCGGGTTAGATGGCTTAGGTGGGCTTTAGGTCTTTTCTGGGTTCAGATTAGATCGATTTGGCAATTGAGCAATTCAAACTAGCCTTTAATAGGTAGAGATTCAATGATGAAAGTAAATCATTCAACCCCAATAATCACTCCAATGGGTGTCGCCTAATTTAATTAACTTCCTTGCATATTTATGATTCTTGCAATTTAATTTCTTGTCTTTTATATTTCTTTCTTGTTTAAATTCTTGCACTTTAAATTCCTTGCACGTTTATTCATCCAATTTTCCAAACCCTCCATTTACCGCTTTCACAACTCAAAATAAATAGAAAATAAGCAACCAATCGCCATTCCCTGTGATCGACCCCGGCCACTACTACTGCAAGTAGTTTAGTGTTCGTAGAATTATAAATTTTATTTGGCAAACTGGGAGCCTCGACAACTCCTGACCCGTCAACAACTTAGTATGTGGTTCGGGGACGAACCAGGGCGAAAGCTGGTGGGCATGTGACGCTCGTCGTTGCTTTAGTCGCCATAGCCATGTCGTGCTGTCGCACCGCCCCTCTGCACGTTGAACTCTCTTTCTCTCTCTCGGTGTTCGCGTGGAAGCCCGGCACGTGAGTCTCCCTCTCCGCGCCATCCTGTCGCCGACGTTCCTTGCCGAAAATCGAAGACCCAAGCGCCGTTGCCTCATTTCGCTGCTAGTTCGAGCCCCCGCCGTCGCCCAGCTTGTTGATCAGTGATTTTCCCCTTGTTTTGGTGGGTTTTGTGGCTCGAATCTTCCTTTTGTGTGTTGTTCAACAAGGGAAAACCTGTGGGTAAGCCTCTCTTTCCCTCGTTCTAGTTGATTTAAGGTTTGATCTAACCTCCATTCACTTTGTTCAGTCAGATTCGTGCGCGTCCAGCAACTCGAGCCTCGTTTTCTCACATTTTTGCTTCTGTTCAGCGAGTGATATGGCTTCGGATCTCCTTGTCTGGTAAGTTTAAGCTCTACCCAAGGTTGATGGGTGCTTAAAATAGATTACCCTTTTCGTTTCGGGCATAAGGATTGAATTTCTTGCTTTAATTCTGTTTTGCAGCGCCGCCTAGGAATCGTTCAGGTTCATTTTGCCTCAAGTTTGGAGACCCACTACTTAAAGGTCCTTTAGTGAGTTGTCTTAGTTTAGTAAGACCCATTTCGGCATGGTTTCAGGTCCGTTGGAAAAGAAAACCTTGCTGTTTTGGCTTATTTCTTGTTGTTTTAGTTTTAAAAACATTAAGTATCGTTACCCATTAGTCGTTTAGGCTCTTAAAGCGTTGCCCATCTCCTATAGGTCCTAGAATGTGTTAACGAATGGGTCTTTGCTTGCTGTTTTTAGTTTAAGAGCATGTAATATCAATGCCCATTAAGTGTTGCTGCCTAATTAGTTTTACCCAACTCTTGTAGGTTCTTGAAGCATGAGATTAATGAGTTTCTGCTTGCTGTTCGTAGTTTAAAAAGCATGTTAAATAGGTTTCCATTGATTATCTTAGGCCCTAGTAGAGTTGCCTAATCTCTAGGAGCCCTTAGAATTCCTAAATGTGACTTTTTACTTGTTGTCCAACGGCTAAAAAGTCTTATTTGGGGCCATTCGACGAATACCCATTGCCCGTTGTGCCTTAGACATGGTTGTCCATGGTCTAAAGGTTTTGGGTTTTTAATTTGGGGAATTTTGAGTAGCTGTCCAGCAATGAAATAGTTCTTTCGCGATTGAGTTTGGTCTTTAAGCATGATTAGAGTAGCTTTGAGTTGATTCTAATTCAGTAGGATTTGTCCTTGTTGTTTAGGAGCTTTCTTGGACTGCCTTGGATTACTAAGGTTGCGTTAGAAGCGCTGTAGGTAAGTAGTTTCTAATTACTAAGTTATGTTTGACTGCCTGTAGCATGTTGAGTGTTTACTTGCTTTTTCTATATACTTGTGCGAAACATGATCCGCTATGTTGTTGACTGTGTAATACTTGAAATGAGTGTATCATGTTGAGTTAAGCATGAGTTGTTGTGTTAAGACTTGGATGAGATGTTTGAGTTAAAGCATGACTTGTTGTGCCATATAGCATAGTATGTTGCTTGGGATGAGCATGTTTTTAAAGGATTGGAATTCCCAATTCCGTTACAGCGGAAGCAATTGGACCGAATCGTATTTTAATTTCGTTTAACAAAATACCCATACATTGGAAAAAATCATAAATCTAGACTATGCAATGAGAAACATACCTCCGTTGACGACTCAGAATTCTTCAACGGACACCACCACGAGGTTACCCTGCTATTCTCTAAGATTGAGAACGGAGTGGTAGGACTCCCTCACGTTCTTGAATTTGGGAGAGAAACACAGAGAGTAATGAACTTCTTTGTTTTACGTTGAAAGAGAGTTGATGAGAGAGTGAGAGAGATTTTTTCAAGATTCTGCAGAATGAATCATATCACACAGACCCCTCTTGCGTATGGTTTAAGTGAGAGAGAAAAAATTAATATAATAATTAATTAACTATTTAATTAATTAATATCTAATATTTAATTACATGTGCATTAAATCATATTAAATGCACATCCCTCACTTAATATATAGTTTTAATTAAGTTTAATTAATTTTTTCTCAAAAAAAAAATAAGTTTAATTAAATTAATTAAACTAAACAATTAATTAATTCATAATTAATTAATTCTTTGGCCAATTAAATATCACATATTTAATTAATCATACATTTGAATCATATTCAAATGTGCATCTCTCTTATAACCTATAGTTTTAATATGAATCCAATTCACATTAAAATTAATCTATAGTTTTAATTTAATTAAATCACATTTAACTAAATTAAATTGAACAATCAATTAATTCAAAATTAATTAATTATTGTGATTAATTAAATATCACATATTTAATTAATTACATATTAGAATCATATTCTAATTTATCTCTCATATAATATATAGTTTAATTAAATCACATTTAATTTAAACTAAATTGAATAATTAATTAATTCATAATTCATTTATTAATCAAATATCATATATTTAATTAAATATATTAATTTGAACTCTTTCAAATATATAATTCTCTCATTTAATAAAGTTTAATCTCGCATTAAACTTTATATTATAATGTTTCACTATACATTATATTGATTGTATCTCATACAATTAACTTGCTTCCCAAGATGAATTTGAACTATTCAAATTATTTCAAGATAAATTGTTCTCAATTACTCTTTACGAGCTAGTATGGGGACCTAATGGACCTACAGATCAGAAGCTCCAATGATATGAGGTTAACTGACTAAACTCATTAATCGAGTTAACCAATATTCATTAACTGTGGGTCACTCTACTAAAGACCCACAACTGCACTCTTCTCACTGTAGAATATTTATGTGTCCATGGATATTGACCAATATCGGTAAGTTAATCCTTCACGAGTGTTCGTAACTACAGCTGGGTCAAATTACTATTTTACCCCTAAGTTACCTCTGACTCCTTAAGTACCAGTGCTCCTCTAATGAACAACCTGTTTATGGTCAAACCATTAAACAGAAAGTCCCTCTCGAGCCATTGAGAGGGCGGGATCCCTTTGTTCAAGACTCGGAGTCACCACTTAAGGGGTCGTTTGGGGTGTGGGAATGGATTGGGTTGGAATGGAACGGAACGAAATGTGATACCCATGTTTGGTGGGCCGGATTTAGGTGGGGTTGGAATGGAATTGTGGGCATGTGGATTCCAACCCATTTCCCACATTTTGGTGGGTCCCACTATTTCTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACCATTTCTTTTTCTATTTTCCTTATAATTTTGGTGGGTCCCACTATTTCTCTCTCCATTAATTCCAACCCAAATCCAGCGCACCAAACACAGGCATCATGATTCCCAGGAATCCAGATGCCAGCAAAATATTCCCATGGGAATCACATTCCATTCCATTCCATTCCAAACCAATTCAATTCCAGCACACCAAAAGCCCGGGGTCGTTTGGGGTGTGGGAATGGATTGGGTTGGAATGGAATGGAATGTGATACCCATGTTTGGTGGGCCGGATTTGGGTGGGGTTGGAATAAAATTGTGGGCATGTGGATTCCAACCCATTTCCCACATTTTGGTGGTCCCACTATTTCTCTCTCCATTTTTCTTCATAATTCTGATGGGACACACCATTTCTTTTTCTATTTTCCTTATAATTTTGGTGGGTCCCACTATTTATCTCTCCATTAATTCCAACCCAAATCCAGCGCATCAAACACAGACATCATGATTCTTAGGAATCCAGATGCCAGCAAAATATTCCCATGGGAATCACATTCCATTCCAAACCTATTCAATTCCAGCGCACCAAACGGTCGGGGCCGTTTGGGGTGTGGGAATGGATTGGGTTGGAATGGAATGGAATGTGATACCCATGTTTGGTGGGCCGGATTTGGGTGGGGTTGGAATGGAATTGTGGGCATGTGGATTCCAACCCATTTCCCACATTTTGGTGGGTTCCACTATTTCTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACCATATCTTTTTCTATTCTCCTTATAATTTTGGTGGGTCCCACTATTTCTCTCTCCATTAATTCCAATCCAAATCCAGCGCACCGAACACAGGCATCATGATTCCTAGGAATCCAGATGCCAGCAAAATATTCCCATGGGAATCATATTCCATTCCATTCCATTCCAAACCTATTCAATTCCAGCGCACCAAACGGCCAGGGCCGTTTGGGGTGTTGGAATGGGTTGGGTTGGAATGGAATGGAATGTGATACCCATGTTTGGTGGGCCGGATTTGGGTGGGGTTGGAACGAAATTGTGGGCATGTGGATTCCAACCCATTTCCACATTTTGGTGGGCCCCACTATTTCTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACCATTTCTTTTTCTATTTTCCTTATAACTTTGGTGGGCCCCACTATTTCTCTCTCCATTAATTCCAACCCAAATCCAGGTCACCAAACACAGGCATCTTGATTCCCGGTCGTTTGGTGTGCTGGAATTGAATAGGTTTGGAATGGAATGGAATGTGATACCCATGTTTGGTAGGCCGGATTTGGGTGGGGTTGGAACGGAATTGTGGGCATGTGGATTCCAACCCATTTCCCACATTTTGGGGGGTCCCACTATTTCTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACTATTTCTTTTTCTATTTTGTTATAATTTTTGTGGGTCCCACTATTTCTCTCTCCATTAATTCCAACCCAAATCCAGCGCACCAAACACAGACATCATGATTCCTAGGAATCCAGATGCCAGCAAAATATTCCCATGGGAATCACATTCCATTCCAAACCTATTCAATTCCAGCGCACCAAACGGTCGGGGCCGTTTGGGGTGTGGGAATGGATTGAGTTGGAATGGAATGGAATGTGATACCCATGTTTGGTGGGCCGGATTTGGGTGGGGTTGGAATGGAATTGTGGGCATGTGGATTCCAACCCATTTCCCACATTTTGGTGGGTTCCACTATTTCTCTCTCCATGTTTCTTCATAATTTTGATGGGACCCACCATATCTTTTTCTATTCTCCTTATAATTTTGGTGGGTCCCACTATTTCTCTCTCCATTAATTCCAATCCAAATCCAGCGCACCGAACACAGGCATCATGATTCCCAGGAATCCAGATGCCAACAAAATATTCCCATGGGAATCATATTCCATTCCATTCCAAACCTATTCAATTCCAGCGCACCAAACGACCGGGGCTGTTTGGGGTGTGGGAATGGTTTGGGTTGGAATGGAATGGAATGTGATACTCATGTTTGGTGGGCCGGATTTGGGTGGGGTTGGAACGAAATTTTGGGCATGTGGATTCCAACCCATTTCCACATTTTGGTGGGCCCCACTATTTCTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACCATTTCTTTTTCTATTTTCCTTATAACTTTGGTGGGCCCCACTATTTCTCTCTCCAACAATTCCAACCCAAATCCAGGTCACCAAACACAGGCATCTTGATTCCCGGTCATTTGGTGTGCTGGAATTGAATAGGTTTGGAATGGAATGGAATGTGATACCCATGTTTGGTAGGCCGGATTTGGGTGGGGTTGGAACGGAATTGTGGGCATGTGGATTCCAACCCATTTCCCACATTTTGGGGGGTCCCACTATTTCTCTCTCCATTTTTCTTCATAATTTTGATGGGACCCACTATTTCTTTTTCTATTTTCCTTATAATTTTTTTGGGTCCCACTATTTCTCTCTCCATTAATTCCAACCCAAATCCAGCGCACCAAACACAGGCATCATGATTCCCAAGAATCCAGATGCCAGCAAAATATTCTCATGGGAATCACATTCCATTCCATTCCATTCCAAACCTATTGCATTCCAGTGCACCAAACGACCCCTAAGGAAACACTCATCTACTTCTTCTATAAGTGGGAAGGAGTGAATTCCATCTTATGTTTTCATGTCCCCAGCCCCCCACTCGGTCTCATTCCCAAGAAGGTAGGCTTATGTAGTCAGCGTGCAGGCCACTCTCACCTATACTAATCAAAGGATATTCCCTTGTGAGAAGGAGTTCATGACACACTCAGGATTAAGACTGAGTTACCTTGGTCATCCTATTGAAACAATAACCTAACTAGTTAACCGTGTTACATCTAGTGGTTTACTATTTCGTGGTCCGATCTTATGCAAACTCATTGCATAGGATACCCCCGCTCGCATGTGTCCTACATGGACCCCTTGGATCAATACGTCTGTATCGAATACAAAGCGGACCGTATCACATAGAGTTACCAGGATAAGGTACCCAACCTTATCCCTATACTATAGACCTTTTAGGTTGTTACTTGAACATTGATTACCGTATGTCCCCACTTACTAGTTCAAGTTACATATACACAACCTTGGATCTTAGTTTATTGGATTTGGGTCATATTGTGCAATTTTAGACTTAAAATGACAATAACACTTTATTGCATAACTCTCAATAACACTTTATTGATACAAGCGTATAATTCATTAATATTCACTATCTACGAGTTTTAGGACATAAAACCCAACAGTTTTTGTTGATTAAACATGATGAAGTGTTGAGTCAAGCATGGTTTAGTCTGTCTAGCATGTTGCATGGGGATGTGTAGCATGAGTCAGGTGTGAGACGCAGCACATGGAGCGTAATTCATATGTACCGGAGCGTGATGCGGAAATCACGTGGGTGTGAGTGTGGAGCGTGACGTGAAAATCACGTAAGAGTGGCGCAACACATGATGCAAAATTCATGTGGGGTAGGTGCGAAACATGACGTAGAAATCATGTTAATTGCGGAGTATGACGCGGAAATCATGTATTTGTGGAGCATGACGTGGAAATCATGTAAATTGCAGAGCATGACGCAAAAATCATGTAGTGTTTAGTGCTTGCATTGCATAGTGTGAGATGCATTTGCATGGTCGTTTATTGTTTTTAAGCATGTTGATAGATTATAGCTTAAAAACATGTTGAATGTTTATGGTTGTATAAGCATGTTGGATGCGTGTGAGAAGTATGTCGGTTGTATTGTTTGTTGTGTGTGACTTTGTAAGTGTGAGTTGCTTACCAGTACCACAGTTGTACTGATACCCCCTTCCCCATCTGCCCCCAACATTTTTGATGTTGCAGGGTTGGACGATGAGCTGGACCTTGGTGATGAAGAGGAGAACTACGAGGAAGATGCCTAA

mRNA sequence

ATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGCGAAAAGGTTGATGCAATCATTGCCGCTTTAGAGAAGGGCAAAATGGTGGCAGATACGACTGCACCAGACACTCCGATTGGAAACCCTCAAGTTGGCCTACCATTTCCACCCAGGTTCGCTTCACATGTTCGTACGACAACAGAAGCGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTAAATCATTTAAAGAAGGCCAAATTCCCCAAATCCCCATGGCTAGCCAAGCTGAGATCATGACTCCCAAGGAGAAGCTTTTTGAGATTCTCCTCATTAACGGATATGTATCAATTGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATTCTGGGGCAAAGAGACATTCTTTGGAACCATGTCATCATTTTCATAAAAGGGTCCAAGAACTGGTGGATTCAAAATTTCTTGTGGTTGCCCAAGCCCATCACCACGACAATGAAATAGGGGCCGTGGAAGAATTGATGCCTAAAGAAAATTTGAATCCATCTTTCAAACTAAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAGGTGCCAGCTCCTTTCAAGTACAAGAGTTCCAAGGCAGTACCATGGAGTTATGAGTACAAAGAAAGCAACAGTCGTTTAGATGATGTTTTAAGCCTATCAAAATATACAAAAAGATTTGGGCTTCGGTATAAGCCGAATAAAGCAGATATGATCAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGCGAACCAGAAGATGGAGAAAAAGTCATTCCTCATCTCTATCACTCGTTTGAAAGTGCTGGTATAATTCGTTCAGGAGATTTTGCAGTTGCAACAGTGACTAAAGAGGAAGAATTGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTATTATTGAATTTCCGTTATTTGCTATTAAGATGTCAAAGCCACTCTCACCCATACAAATCAAAGGACAATCCCTCGAGTATAGTGTCACTAGGATAAGGGCGAAAGCTGGTGGGCATGTGACGCTCGTCGTTGCTTTAGTCGCCATAGCCATGTCGTGCTGTCGCACCGCCCCTCTGCACGTTGAACTCTCTTTCTCTCTCTCGGTGTTCGCGTGGAAGCCCGGCACTCAGATTCGTGCGCGTCCAGCAACTCGAGCCTCGTTTTCTCACATTTTTGCTTCTGTTCAGCGAGTGATATGGCTTCGGATCTCCTTGTCTGCGCCGCCTAGGAATCGTTCAGGTTCATTTTGCCTCAAGTTTGGAGACCCACTACTTAAAGGTCCTTTAGTGAGTTGTCTTAGTTTAGTAAGACCCATTTCGGCATGGTTTCAGTGCTCCTCTAATGAACAACCTGTTTATGGTCAAACCATTAAACAGAAAGTCCCTCTCGAGCCATTGAGAGGGCGGGATCCCTTTGTTCAAGACTCGGAGTCACCACTTAAGGGGTCGTTTGGGGTGTGGGAATGGATTGGGTTGGAATGGAACGGAACGAAATGTGATACCCATGTCACCAAACACAGGCATCTTGATTCCCGGTCGTTTGGTGTGCTGGAATTGAATAGGTTTGGAATGGAATGGAATGTGATACCCATCGCACCGAACACAGGCATCATGATTCCCAGGAATCCAGATGCCAACAAAATATTCCCATGGGAATCATATTCCATTCCATTCCAAACCTATTCAATTCCAGCGCACCAAACGACCGGGGCTGTTTGGGGTGTGGGAATGGTTTGGGTTGGAATGGAATGGAATGTGATACTCATGTTTGGTGGGCCGGATTTGGGTGGGGTCACCAAACACAGGCATCTTGATTCCCGGTCATTTGGTGTGCTGGAATTGAATAGGTTTGGAATGGAATGGAATGTGATACCCATGTTTGGTAGGCCGGATTTGGGTGGGGATACCCCCGCTCGCATGTGTCCTACATGGACCCCTTGGATCAATACGTCTGTATCGAATACAAAGCGGACCGTATCACATAGAGTTACCAGGATAAGGTGTGAGACGCAGCACATGGAGCGTAATTCATATGTACCGGAGCGTGATGCGGAAATCACGTGGGTTACCACAGTTGTACTGATACCCCCTTCCCCATCTGCCCCCAACATTTTTGATGTTGCAGGGTTGGACGATGAGCTGGACCTTGGTGATGAAGAGGAGAACTACGAGGAAGATGCCTAA

Coding sequence (CDS)

ATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATCGAGGAAATCAGCGAAAAGGTTGATGCAATCATTGCCGCTTTAGAGAAGGGCAAAATGGTGGCAGATACGACTGCACCAGACACTCCGATTGGAAACCCTCAAGTTGGCCTACCATTTCCACCCAGGTTCGCTTCACATGTTCGTACGACAACAGAAGCGTCCATGCCACAACATACTACCTATAACCCCTTATATGACATACCTGTTGGGCAATACCCTTTTAAATCATTTAAAGAAGGCCAAATTCCCCAAATCCCCATGGCTAGCCAAGCTGAGATCATGACTCCCAAGGAGAAGCTTTTTGAGATTCTCCTCATTAACGGATATGTATCAATTGAGTATGCACACAAGGACCTTGTTCAAGAAGGATTCGATGATAATTTGACTTGCCTATTTCATTCTGGGGCAAAGAGACATTCTTTGGAACCATGTCATCATTTTCATAAAAGGGTCCAAGAACTGGTGGATTCAAAATTTCTTGTGGTTGCCCAAGCCCATCACCACGACAATGAAATAGGGGCCGTGGAAGAATTGATGCCTAAAGAAAATTTGAATCCATCTTTCAAACTAAAGCCACTCACGATCTATTACCGTGAGAAGACTACTACTCATGATCCAAAGTCGATCACCATTCAGGTGCCAGCTCCTTTCAAGTACAAGAGTTCCAAGGCAGTACCATGGAGTTATGAGTACAAAGAAAGCAACAGTCGTTTAGATGATGTTTTAAGCCTATCAAAATATACAAAAAGATTTGGGCTTCGGTATAAGCCGAATAAAGCAGATATGATCAGGGTACAGAAGCGAGAAAAAGAGAGGCGTTTGGCCAGATTTGAAAGTCGCGAACCAGAAGATGGAGAAAAAGTCATTCCTCATCTCTATCACTCGTTTGAAAGTGCTGGTATAATTCGTTCAGGAGATTTTGCAGTTGCAACAGTGACTAAAGAGGAAGAATTGGGTCCATGGATCTACCCGTGCCCAGAAAACTTCGAGCTCAACAATTGGAGTATTATTGAATTTCCGTTATTTGCTATTAAGATGTCAAAGCCACTCTCACCCATACAAATCAAAGGACAATCCCTCGAGTATAGTGTCACTAGGATAAGGGCGAAAGCTGGTGGGCATGTGACGCTCGTCGTTGCTTTAGTCGCCATAGCCATGTCGTGCTGTCGCACCGCCCCTCTGCACGTTGAACTCTCTTTCTCTCTCTCGGTGTTCGCGTGGAAGCCCGGCACTCAGATTCGTGCGCGTCCAGCAACTCGAGCCTCGTTTTCTCACATTTTTGCTTCTGTTCAGCGAGTGATATGGCTTCGGATCTCCTTGTCTGCGCCGCCTAGGAATCGTTCAGGTTCATTTTGCCTCAAGTTTGGAGACCCACTACTTAAAGGTCCTTTAGTGAGTTGTCTTAGTTTAGTAAGACCCATTTCGGCATGGTTTCAGTGCTCCTCTAATGAACAACCTGTTTATGGTCAAACCATTAAACAGAAAGTCCCTCTCGAGCCATTGAGAGGGCGGGATCCCTTTGTTCAAGACTCGGAGTCACCACTTAAGGGGTCGTTTGGGGTGTGGGAATGGATTGGGTTGGAATGGAACGGAACGAAATGTGATACCCATGTCACCAAACACAGGCATCTTGATTCCCGGTCGTTTGGTGTGCTGGAATTGAATAGGTTTGGAATGGAATGGAATGTGATACCCATCGCACCGAACACAGGCATCATGATTCCCAGGAATCCAGATGCCAACAAAATATTCCCATGGGAATCATATTCCATTCCATTCCAAACCTATTCAATTCCAGCGCACCAAACGACCGGGGCTGTTTGGGGTGTGGGAATGGTTTGGGTTGGAATGGAATGGAATGTGATACTCATGTTTGGTGGGCCGGATTTGGGTGGGGTCACCAAACACAGGCATCTTGATTCCCGGTCATTTGGTGTGCTGGAATTGAATAGGTTTGGAATGGAATGGAATGTGATACCCATGTTTGGTAGGCCGGATTTGGGTGGGGATACCCCCGCTCGCATGTGTCCTACATGGACCCCTTGGATCAATACGTCTGTATCGAATACAAAGCGGACCGTATCACATAGAGTTACCAGGATAAGGTGTGAGACGCAGCACATGGAGCGTAATTCATATGTACCGGAGCGTGATGCGGAAATCACGTGGGTTACCACAGTTGTACTGATACCCCCTTCCCCATCTGCCCCCAACATTTTTGATGTTGCAGGGTTGGACGATGAGCTGGACCTTGGTGATGAAGAGGAGAACTACGAGGAAGATGCCTAA

Protein sequence

MEEKGEQEKTKRDIEEISEKVDAIIAALEKGKMVADTTAPDTPIGNPQVGLPFPPRFASHVRTTTEASMPQHTTYNPLYDIPVGQYPFKSFKEGQIPQIPMASQAEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKRVQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHDPKSITIQVPAPFKYKSSKAVPWSYEYKESNSRLDDVLSLSKYTKRFGLRYKPNKADMIRVQKREKERRLARFESREPEDGEKVIPHLYHSFESAGIIRSGDFAVATVTKEEELGPWIYPCPENFELNNWSIIEFPLFAIKMSKPLSPIQIKGQSLEYSVTRIRAKAGGHVTLVVALVAIAMSCCRTAPLHVELSFSLSVFAWKPGTQIRARPATRASFSHIFASVQRVIWLRISLSAPPRNRSGSFCLKFGDPLLKGPLVSCLSLVRPISAWFQCSSNEQPVYGQTIKQKVPLEPLRGRDPFVQDSESPLKGSFGVWEWIGLEWNGTKCDTHVTKHRHLDSRSFGVLELNRFGMEWNVIPIAPNTGIMIPRNPDANKIFPWESYSIPFQTYSIPAHQTTGAVWGVGMVWVGMEWNVILMFGGPDLGGVTKHRHLDSRSFGVLELNRFGMEWNVIPMFGRPDLGGDTPARMCPTWTPWINTSVSNTKRTVSHRVTRIRCETQHMERNSYVPERDAEITWVTTVVLIPPSPSAPNIFDVAGLDDELDLGDEEENYEEDA

Homology

[Close]

BLAST of Spg020644 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 143.7 bits (361), Expect = 6.8e-30
Identity = 77/144 (53.47%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TPKE+LFEILL +GYVS+EY   +L  + +D++LTC FH+GAK HSLE C+ F  +
Sbjct: 451 ADIRTPKEELFEILLGSGYVSVEYLCPNLKYKEYDESLTCPFHAGAKGHSLEQCNSFRMK 510

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREK--TTTHDPKS 224
           VQEL+DSK L VA +H     I  VE++   E  + + K K LTI+Y EK    +   K 
Sbjct: 511 VQELLDSKILTVANSHQKKG-INVVEDVSVAEGSSDALKPKRLTIFYSEKPDAPSCSQKP 570

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYK 247
           ITI VPAPF+YKSSKAVPW Y+ K
Sbjct: 571 ITITVPAPFEYKSSKAVPWKYQCK 593

[Close]

BLAST of Spg020644 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 138.7 bits (348), Expect = 2.2e-28
Identity = 87/208 (41.83%), Postives = 122/208 (58.65%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TP  +LFEILL +GYVS+EY   +L  +G+D++LTC FH+GAK HSLE C+ F  +
Sbjct: 458 ADIRTPMVELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHSLEQCNSFRMK 517

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHD--PKS 224
           VQEL+DSK L VA +H     I  VE++   E  + + K K LTI+Y EK    +   K 
Sbjct: 518 VQELLDSKILTVANSHQKKG-INIVEDVSVAEGSSDALKPKCLTIFYSEKPNAPNCSRKP 577

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYKESNSR--------LDDVLSLSKYTKRFGLRYKPNK- 284
           ITI VPAPF+YKSSKAVPW Y+ K +  +        +D++  +   T R G  Y P+  
Sbjct: 578 ITITVPAPFEYKSSKAVPWKYQCKVTVGQDVSSPPLPIDNITGVGGLT-RTGRCYTPDSL 637

Query: 285 ADMIRVQKREKERRLARFESREPEDGEK 302
              +     EK +  A  + +E  + +K
Sbjct: 638 LKCVNETTSEKNKEKASEKKKEKVEEDK 663

[Close]

BLAST of Spg020644 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 136.7 bits (343), Expect = 8.3e-28
Identity = 86/225 (38.22%), Postives = 130/225 (57.78%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           +EI TP + LFEIL  +GY+S+E+   D+  E +D+NLTC +H+GA+ H LE C  F ++
Sbjct: 560 SEITTPMQXLFEILWXHGYMSMEHLCPDIRCERYDENLTCPYHAGARGHPLEQCSCFKEK 619

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREK--TTTHDPKS 224
           VQEL+D K L V Q+ H +  I  VE +   E+ + ++K KPLT+ YREK    ++  + 
Sbjct: 620 VQELLDLKILTVTQS-HQEQRIDVVEYVSTAESSSAAYKPKPLTVLYREKPEVPSNSWRP 679

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYK-------ESNSRLDDVLSLSKYTKRFGLRYKP---- 284
           ITIQVPAPF+Y SSKAVPW YE K       +S+S   D ++      R G  Y P    
Sbjct: 680 ITIQVPAPFEYSSSKAVPWKYECKVTVGQKAQSSSLPVDNITRGGGMTRTGRCYTPESLL 739

Query: 285 ---NKADMIRVQKREKERRLARFESREPEDGEKVIPHLYHSFESA 314
              NK +    +++  E++  + E ++ +   K+   +Y  F+ A
Sbjct: 740 KHTNKPNSTNKKEKASEKKNEKVE-QDKKGKAKLGEDIYDEFQEA 782

[Close]

BLAST of Spg020644 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 136.0 bits (341), Expect = 1.4e-27
Identity = 77/148 (52.03%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TP E+LFEILL +GYVS+EY   +L  +G+D++LTC FH+GAK H+LE C+ F   
Sbjct: 393 ADITTPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHALEQCNSFRMI 452

Query: 165 VQELVDSKFLVVAQAHHHDN----EIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHD- 224
           VQEL+DSK L VA +H        E  +V E    E  + + K K LTI+Y EK    + 
Sbjct: 453 VQELLDSKILTVANSHQKKGINVVEDVSVAEGSIAEGSSDALKPKRLTIFYSEKPDAPNC 512

Query: 225 -PKSITIQVPAPFKYKSSKAVPWSYEYK 247
             K ITI VPAPF+YKSSKAVPW YE K
Sbjct: 513 SRKPITITVPAPFEYKSSKAVPWKYECK 540

[Close]

BLAST of Spg020644 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 107.8 bits (268), Expect = 4.1e-19
Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 162  HKRVQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHDPK 221
            H++++  VD K +++  +   D  +  +  +   E    +F+    +      TT H   
Sbjct: 832  HQKIKFAVDQKLVII--SGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHG-- 891

Query: 222  SITIQVPAPFKYKSSKAVPWSYEYKESNSRLDDVLSLSKYTKRFGLRYKPNKADMIRVQK 281
                      K+   K       +K  N  LD +L ++K TK+FGL YKP++ D+IRV+ 
Sbjct: 892  ----------KFGRPKPRLLETAFKGDNESLDKLLRMAKNTKKFGLGYKPSRGDIIRVRS 951

Query: 282  REKERRLARFESREPEDGEKVIPHLYHSFESAGIIR---SGDFAVATVTKE-EELGPWIY 341
             EK +RL+RFE+ E +   + +P L HSF SAG I     G   VA VT+E E++ P++Y
Sbjct: 952  LEKAKRLSRFENEERDYPRRTVPPLSHSFRSAGTIHQEYDGSSVVAAVTEEREQVRPFVY 1010

Query: 342  PCPENFELNNWSI 351
            PCP+ FEL+NWS+
Sbjct: 1012 PCPDGFELSNWSV 1010

HSP 2 Score: 131.7 bits (330), Expect = 2.7e-26
Identity = 84/207 (40.58%), Postives = 118/207 (57.00%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TP  +LFEILL +GY+S+EY       +G+D++LTC FH GAK HSLE C+ F  +
Sbjct: 498 ABITTPMXELFEILLGSGYISVEYLCPK--YKGYDESLTCXFHXGAKGHSLEQCNXFRMK 557

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREK--TTTHDPKS 224
           VQEL+DSK L  A + H       VE+++  E  + S K KPLTI+YREK    +   K 
Sbjct: 558 VQELLDSKILTXANS-HXKKXTNVVEDILVAEGSSDSLKPKPLTIFYREKPDAPSCSRKP 617

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYKESNSR--------LDDVLSLSKYTKRFGLRYKPNKA 284
             I VP PF+YKSSKAVPW YE K +  +        +D++  +   T R G  Y P+  
Sbjct: 618 XXITVPXPFEYKSSKAVPWKYECKVTVGQDVSSPSLPVDNITGVGGLT-RTGRCYTPDSL 677

Query: 285 DMIRVQKREKERRLARFESREPEDGEK 302
            + RV +   E+   +   ++ E  E+
Sbjct: 678 -LKRVNETTSEKNKEKASEKKKEKVEE 699

[Close]

BLAST of Spg020644 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.3e-30
Identity = 77/144 (53.47%), Postives = 99/144 (68.75%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TPKE+LFEILL +GYVS+EY   +L  + +D++LTC FH+GAK HSLE C+ F  +
Sbjct: 451 ADIRTPKEELFEILLGSGYVSVEYLCPNLKYKEYDESLTCPFHAGAKGHSLEQCNSFRMK 510

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREK--TTTHDPKS 224
           VQEL+DSK L VA +H     I  VE++   E  + + K K LTI+Y EK    +   K 
Sbjct: 511 VQELLDSKILTVANSHQKKG-INVVEDVSVAEGSSDALKPKRLTIFYSEKPDAPSCSQKP 570

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYK 247
           ITI VPAPF+YKSSKAVPW Y+ K
Sbjct: 571 ITITVPAPFEYKSSKAVPWKYQCK 593

[Close]

BLAST of Spg020644 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-28
Identity = 87/208 (41.83%), Postives = 122/208 (58.65%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TP  +LFEILL +GYVS+EY   +L  +G+D++LTC FH+GAK HSLE C+ F  +
Sbjct: 458 ADIRTPMVELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHSLEQCNSFRMK 517

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHD--PKS 224
           VQEL+DSK L VA +H     I  VE++   E  + + K K LTI+Y EK    +   K 
Sbjct: 518 VQELLDSKILTVANSHQKKG-INIVEDVSVAEGSSDALKPKCLTIFYSEKPNAPNCSRKP 577

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYKESNSR--------LDDVLSLSKYTKRFGLRYKPNK- 284
           ITI VPAPF+YKSSKAVPW Y+ K +  +        +D++  +   T R G  Y P+  
Sbjct: 578 ITITVPAPFEYKSSKAVPWKYQCKVTVGQDVSSPPLPIDNITGVGGLT-RTGRCYTPDSL 637

Query: 285 ADMIRVQKREKERRLARFESREPEDGEK 302
              +     EK +  A  + +E  + +K
Sbjct: 638 LKCVNETTSEKNKEKASEKKKEKVEEDK 663

[Close]

BLAST of Spg020644 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.0e-28
Identity = 86/225 (38.22%), Postives = 130/225 (57.78%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           +EI TP + LFEIL  +GY+S+E+   D+  E +D+NLTC +H+GA+ H LE C  F ++
Sbjct: 560 SEITTPMQXLFEILWXHGYMSMEHLCPDIRCERYDENLTCPYHAGARGHPLEQCSCFKEK 619

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREK--TTTHDPKS 224
           VQEL+D K L V Q+ H +  I  VE +   E+ + ++K KPLT+ YREK    ++  + 
Sbjct: 620 VQELLDLKILTVTQS-HQEQRIDVVEYVSTAESSSAAYKPKPLTVLYREKPEVPSNSWRP 679

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYK-------ESNSRLDDVLSLSKYTKRFGLRYKP---- 284
           ITIQVPAPF+Y SSKAVPW YE K       +S+S   D ++      R G  Y P    
Sbjct: 680 ITIQVPAPFEYSSSKAVPWKYECKVTVGQKAQSSSLPVDNITRGGGMTRTGRCYTPESLL 739

Query: 285 ---NKADMIRVQKREKERRLARFESREPEDGEKVIPHLYHSFESA 314
              NK +    +++  E++  + E ++ +   K+   +Y  F+ A
Sbjct: 740 KHTNKPNSTNKKEKASEKKNEKVE-QDKKGKAKLGEDIYDEFQEA 782

[Close]

BLAST of Spg020644 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 6.9e-28
Identity = 77/148 (52.03%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TP E+LFEILL +GYVS+EY   +L  +G+D++LTC FH+GAK H+LE C+ F   
Sbjct: 393 ADITTPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHALEQCNSFRMI 452

Query: 165 VQELVDSKFLVVAQAHHHDN----EIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHD- 224
           VQEL+DSK L VA +H        E  +V E    E  + + K K LTI+Y EK    + 
Sbjct: 453 VQELLDSKILTVANSHQKKGINVVEDVSVAEGSIAEGSSDALKPKRLTIFYSEKPDAPNC 512

Query: 225 -PKSITIQVPAPFKYKSSKAVPWSYEYK 247
             K ITI VPAPF+YKSSKAVPW YE K
Sbjct: 513 SRKPITITVPAPFEYKSSKAVPWKYECK 540

[Close]

BLAST of Spg020644 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 2.0e-19
Identity = 65/193 (33.68%), Postives = 103/193 (53.37%), Query Frame = 0


Query: 162  HKRVQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREKTTTHDPK 221
            H++++  VD K +++  +   D  +  +  +   E    +F+    +      TT H   
Sbjct: 832  HQKIKFAVDQKLVII--SGQEDILVSRLASMPYVEAAEEAFESSFQSFEIANATTLHG-- 891

Query: 222  SITIQVPAPFKYKSSKAVPWSYEYKESNSRLDDVLSLSKYTKRFGLRYKPNKADMIRVQK 281
                      K+   K       +K  N  LD +L ++K TK+FGL YKP++ D+IRV+ 
Sbjct: 892  ----------KFGRPKPRLLETAFKGDNESLDKLLRMAKNTKKFGLGYKPSRGDIIRVRS 951

Query: 282  REKERRLARFESREPEDGEKVIPHLYHSFESAGIIR---SGDFAVATVTKE-EELGPWIY 341
             EK +RL+RFE+ E +   + +P L HSF SAG I     G   VA VT+E E++ P++Y
Sbjct: 952  LEKAKRLSRFENEERDYPRRTVPPLSHSFRSAGTIHQEYDGSSVVAAVTEEREQVRPFVY 1010

Query: 342  PCPENFELNNWSI 351
            PCP+ FEL+NWS+
Sbjct: 1012 PCPDGFELSNWSV 1010

HSP 2 Score: 132.1 bits (331), Expect = 9.9e-27
Identity = 84/207 (40.58%), Postives = 118/207 (57.00%), Query Frame = 0


Query: 105 AEIMTPKEKLFEILLINGYVSIEYAHKDLVQEGFDDNLTCLFHSGAKRHSLEPCHHFHKR 164
           A+I TP  +LFEILL +GY+S+EY       +G+D++LTC FH GAK HSLE C+ F  +
Sbjct: 498 ADITTPMXELFEILLGSGYISVEYLCPK--YKGYDESLTCXFHXGAKGHSLEQCNXFRMK 557

Query: 165 VQELVDSKFLVVAQAHHHDNEIGAVEELMPKENLNPSFKLKPLTIYYREK--TTTHDPKS 224
           VQEL+DSK L  A + H       VE+++  E  + S K KPLTI+YREK    +   K 
Sbjct: 558 VQELLDSKILTXANS-HXKKXTNVVEDILVAEGSSDSLKPKPLTIFYREKPDAPSCSRKP 617

Query: 225 ITIQVPAPFKYKSSKAVPWSYEYKESNSR--------LDDVLSLSKYTKRFGLRYKPNKA 284
             I VP PF+YKSSKAVPW YE K +  +        +D++  +   T R G  Y P+  
Sbjct: 618 XXITVPXPFEYKSSKAVPWKYECKVTVGQDVSSPSLPVDNITGVGGLT-RTGRCYTPDSL 677

Query: 285 DMIRVQKREKERRLARFESREPEDGEK 302
            + RV +   E+   +   ++ E  E+
Sbjct: 678 -LKRVNETTSEKNKEKASEKKKEKVEE 699

The following BLAST results are available for this feature:

BLAST of Spg020644 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157796.1	6.8e-30	53.47	LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia]	[more]
XP_022158986.1	2.2e-28	41.83	LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia]	[more]
XP_022155098.1	8.3e-28	38.22	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch...	[more]
XP_022143495.1	1.4e-27	52.03	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]
XP_022143495.1	4.1e-19	33.68	LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia]	[more]

Pages

BLAST of Spg020644 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg020644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DZ90	3.3e-30	53.47	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1	[more]
A0A6J1E2J7	1.1e-28	41.83	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1	[more]
A0A6J1DM29	4.0e-28	38.22	LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia...	[more]
A0A6J1CNY7	6.9e-28	52.03	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]
A0A6J1CNY7	2.0e-19	33.68	Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1	[more]

Pages

BLAST of Spg020644 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 274..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020644.1	Spg020644.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
molecular_function	GO:0140640	catalytic activity, acting on a nucleic acid