Spg020345 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020345
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Locationscaffold1: 23796216 .. 23805151 (-)
RNA-Seq ExpressionSpg020345
SyntenySpg020345
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAATCTGAAAGCTTACCGGAAGAGCCCGAACACGCTGGGACGAACCTTAAACCAGCCTAATCACACCCAAAATGCATGGAGAGAGAAGATTCAAACTTCCACCTCATGGATTGAGCCTCAAAACTCGCCATTCACACGTGCGAGTGCTCGCCGGAGAGAGGAGACGGCTCTGCAGAGACGATGTCAGCGCGCGAGAGACGAGCTTCACAAACCTCTAGCTACCGACGGAGAAGACGAATGGAGGAGAGAGAGACAGCCACGGACTGACGGTGTCAGAGAAAGACCGAAGGAAGCGAGAGGAAGATTGGTCTTCACGGGTCACACAGCCTGCTCGCAATGGAGAGAGACGAAACGGTGGCGAGAGCTTGGTCGGACGGTACCGGCGGGAACGGAGGCCTATGTCCTTCGTGCGTCTGCTGCTCGAGGAAGAAAACACACAAGGGATGGGGGCTTACCGGCTGCTTCAACGAAAAGAACGGGAAGAAGATCTCTAGGGCTCCAACTATTTTCTTTTTCCTTTATTTTCCTTTTCTTGATTTCTTTTTTTTTCCCCCTTAAATCAAAGAATAATAACCCAAAGCCTCATATTTAAAGACTTAATTAAGGTCCATGAAACCCAAATCAAATCTTAGAAAATCTATAAGGATTTGGGCCAATTTTAAATTGAAGCTTAGCTCCGAAAAGATTTGGAAAAAAGAGAATAACCCAATTAATTTAGGATTTGGGTCTTCTGAGATTTAAAATATTAAACCTCCAAACTTTAGGAAATTAAAGATTTAACTAAAAATCTCTTTTCCCTAAATTATAGAAATTTAATTTAACAACCCAAGGCTAAGCTTAAATTCTAATTTTCCAAATTAGAATAAGAATGCTCAATTAATCCCAAAAGGGTTCAATTTCGAAACGCGGGGCGTTACATAGACTCTAATTAATTGTGCTGTTAATTAGAAATCTAATTAGGCTCCGGCTTTGATGCGTTGGTCGGGTTGAAAATATTATAGGTTCTTAATCACTGGGTCCAGTAACGGTTAGACAATTGGGTAATAATTTAATTAATTAAAAGAGTCAATGATTGAATTACCAAACTTACCCGAGAATTGATTACATAATCCCGAGGTGAAATCTACCACCCTATTTATTTTCTCGCGTATTAATTCTTGCAATTTAGTTTTAACATTTATTATTATTTTTTTTTTTTGCAATTTATTTTCCCTGGAAATTATTCTTTCGCATCTCAATCCCCCCTTTAGCCTAATCATCGTAATAAATCTAAGTTAGGCAAATTATAAGCGTGCTCCCTGTGTTCGACCCTTGTCACTACTGCTACAAGTTAGCTCTAGGTGTCTTGGATTATAAATTTTATTTCACAAGAGACCTTGACAATCTCTTCCGTCAAAACATAATTTTAAATAGAACGAAAATTCAATTAATCGTTAGTTGACTCAATAGGAAGATAAATTAGACTTTATTATGTTTTTAAATGAAGTACGCCAGACTTAGATAGTTAATTAAAATCAATCGATAATCAATGAATGGAATTATTCAAACTAAACATCGAGTGCCATCCCGACTGCAGTAATCCTTGTGGTAAGATCAACTAACCCATCTTTTTACTTTTCTCACATTTAATTTTCTGCATTTATTTTCCCGCCTTTATTTTTATATATGTTCTTACCTTTTATCCATAAACCCTCCTTCGGTTACCTTAAGGCACAAAAGAATTTAGAAATAAACTAGATTTTCCCTGTGTCTAACCTCGACCATTATCAGTACAAGTTAGCTTTAGGAATCGTGGACTATAAATTTATTTGATAAGATACCTCGACAATCTCTTCCATCAATATGTGAAGTTAATTCTCTTGTAAATACAAAGCGTAACATACATGAACCTTTTTCACATTAAGGAATGTTATCTAACAGGCAAACTCAAGCCTTATTTGCATATATTTTTGCTTGAGTTTTTGCAGGAAATGAGAGCTAATTATGAGACATAAATCAAAAGTCACTTTAAAGGTCCATCCAAACTTCATAGCCTTATTTGCATATATTTTCGCTTGAGTTTTTGCAGGAAATGAGAGCTAATTATGAGACATAAATCAAAAGTCACTTTAAAGGTCCATCCAAACTTCATAAGAAAGGATAACAAGTGGAGAAAGAAGCTTCAAGGCAACATGAGGACACCAAATCTTAAAAGCTTTAATTTAGAGGTTATTTGGGTGTTTATCTTATAAATTATCCCTTCAAACCTTGTACTTTATTTGTAATATGATGTTAAGTTTTTTTGGCAAAAAATGGAGCTCAATGTGTTTAATTGGCCCATTTTAGAAACCCACAAACAACTTGTAATTAAACACTATTCATGTTAGGTAAATTTTAGGGTTTAGTTTATTTGCTTTTAATTTCTTTAGTTTACCAACCATATAGGGCTATTTAAAGTCTTTATTTGTAAATATGGAGGTGTGGGACATTTTGGTGAAATGAGAATGGGGAGAGTTCCTCTATTTGCTCCAGATCAAGAGCATGTTACATCGTAGCTTCTGTTTTCAACTTCCTTAGAAACATTTAAGTTTGATTAGTCATCAAACTTGTTGAGTGTTTCGACTTGAGATTGAAAACAAGTTTTCCTTTCCAAATAGGTTAGTTCTTTCTTCTTCCCATCAAGGGATTTTTTTTTGTGTATGTACTAGGTGTTACCATGTGTGTTTAGAACATCGAACATACCAAGTGTGGTAGTTAAATGCCTAAAACATACTTACTTGGTTTGAATTACGAGGCATTTTGTAGTTGAATGTATGAATCTCTTGCCTTTGAAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATGTTAACAAATTGTGGACTTGTGTCAATAAAGTGTTATTGAGTTTTGAACAATAAAGAGTTGTTATATTAAGTTTAGAATTGCACAATTTGACCCAAATCCAATAAACTAAGATCCAAGTTTGTTTACATGTAACTTGAACTAGTATGTGGGGACATACGGGGCTAGGGGATTAGGGGTGGATCTATGAAGGGGCTAGGGGGGCACGTGCCCCCCTCAAATTATCTCGTCTTTATATTTTTAATATAACTAGTTAAAAGACACGTGCGATAAACATGATTAAAAATTTTCAGAACATAAATTTTTATGGTGCATGAATGAATATTTTTCATTTAGTTTAAATAGTAAATATTTCATTCATAATTTTTCGCAGTAAAGGAAGAAAAAAATAAAACTTTTTTCTCCCACAAACTATGAAATTCTAATGGGGTGGTTTGGTTCAAATTCCAAATGATTGTTCTGAATAAAATTGGCATATAAAAAGTAAAGAAAAGTTAAAAATAAATAGAAAATGCAAATAAATCTGAAGAGTTATAATTACATGTTCATCTAATAAGATGATTTTTAAAATGTGTAGGTCATCACTACCACGTTTTTGGAAATACTTTTTGATCAATGGCATATATCAATTATTGCTAAGCTATGTTTATTTTGGCATATAATATTTATTTTGAACTTATTTATATTAAAATAATATAAATATACATAATTTTATATTTAATTTAGTCATTTTAAAGTAACCTATAGATTCCATTTTATTTTTATTATGTGATTATATGTTCCAAATTTTCCTTTTCCCATGAACCATGTTTTTTTTTTTTTTTTGTCTCAATAACTAATTTAATTTATAACATCAATGAACTATTGTTTTGAATTTAAAATTTGCATGTGGATCCATGGAAAAAATGAGGGCAATTGGACTTTTTGGGCCCCTTAACTTTTTGGATTGTAAAAAGGGACCCTTTTTTAAAAATCTTGTATTTGGGGACCCTTTGTTGACTTTGATGATGTCAGCAAAGGTGTAAAATATCCATTATAGTCTCCCTTAAATTTTCAAAATAGGAAAATTAATTACCTCACCAAACATGTATACTCCTTAATGAACAAGGAGATTGGAAAGACAAAAACATTCTCATTTTCATTCTTATTCTTTTTTGTCCTTTAATCCCCACACAACATTCTTTGGTCCCCACACGATTTTGTCACGTTCATCACACTTTGGATTGCTCAATCACATTCAAAACACTTCCGACATTCGAGTTTCTGAAGGAGCTACGTAAATACTTGTAACGCCCCAGGCCCAGGATTCGGAATCCGGATTCGGCACCTCACGGCCCCGGCATTCCCCTACATCCCCTACGGCCTGGCGACGTCACCATACTCGTCTTAAACCGCTTCTAAGAGTGAAGACTATCCCCACAAACCAACACGAGGTCCTTTTAGCATGCTTTGTCCTCACTCACATGCTTCCTAGGAAAATTCATAGGAGGTCACCCAACATAGAACTTCTCCAAGCCAAGCACGCTTAACTTCAAAGTTCCTATGATTGAGCCACCGAAAAGGAAGGTGCACCTTGTTGGTATAGGTAGTATCTATCAATTCTTTTAAGCTTATCTGGACCATGCTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTACCCCTCCTAACCTCGGGCGTCACATGCCCACCAGCTTCCGCCTTGGTTCGTCCCCGAACCACATCCTACTGGGAGAGGTTTCTCTCGCGTTTCGGTCTCTGTCCAGTGAGTTTTTGTGTGGTTTCAGCCCCCTTTCAGCTTTATTTGGCGTTTAAGGTAAGTTTTAGCCTAACCCATTCCTTTTTGGCATTGAATTCAAGTCACCCATGACCCAAAAGGTGTTAATCTGAGTTACCCACTCTTTATCGCTTCCTAAATTGCAGGTTCGGGCCATTTTGGACACTGTACAGCACGTATCGGTCATAGTTCAGTTATGTTCGGTAAGTTCCGGTGGCCTTAAAGTCTCTAGAAACTGCCTTAGGTAGCTTTAGAATGCTTTTTAACCTTTGGGTATCCGTTAGGTTCAGTTTAATCTCATTTCAGGCTCGGGGCAGCAGCGTGTATAAGGTATTTCTGTGCTGTTTTGTATTTTCCAACAAGGTTCCAGCCCCTGTTCGGTAAGTTTTCAGCACCTTAGGTTCCTTTTTAATCGATGCTAAGTGTTAAGATATATTGGAAGGTCGTTCCCTAACCTCTAGGAGCCTTTACGGTGCTTGTAGGTGTGCTTAGAGCTTATTCCGTTATTTTTCCAGCAAGCGTTGATTTGGTTTAGGAGCGCTTGTAAGCTTGGGTAAGTAGTTTCTACTTGGTTGAGCTTGTTTGATGTTTGAGCCTGTCGTTTGCCTTGCTTGCTTGTTTTTACATGTTGTGGTTGATATGTATGTAGCTCGCTACGTGAAAGAATGTGATGTGTTGTTGGATTCTTAAGCATATTGCTCTGTTGATTCATAAGTATGCCGCTTGTTGAATTCATGAGCATGAGGTAATGATGCATGATAACTATGTTGCATAAGAGTCGTGTCTGCATAGTGTGTGGTCATTGGGGAGAGGCGGAGCATGACGCGTAAATCATGTGCTGGGTGTGTGTGCGGAGCGTGACGCGGAAATCACGTGTGGGTTGTGAGTGCGGAGCGTGACGCGGAAATCACGTGTGAGAGGCGCTGCGCATGGCGCGAGATAATACATGTGTTGGGTGGGTTTGCGGAGCGTGACGCGGAAATCACGTGTGGATTGTGAGTGAGGAGCGTGACGCGGAAATCACGTGTGAGTGAGCGAGCATGGCGCAGAAACCATGTGGGGGTGCATAGCATGATGCGTGGATTCATGTTGTCGTCCCATTTTGCATGAAACATGTGTTGCACAATTGTTTTCGTGTTTAAGAGTATGTTGAGTTGTTTATCGCTTTTCAAGCATCGCGTGTGTGGATAGCATGTTATTGTGATTGTGTTTTGTTTGGTGGCTCACCGGGTGTGAGCTACTTACCAGTACTGTGGTTGTACTGATACCCCTCCCCTTTCTTCCCCCCAACAATTTCAGATTATGCAGGTGATGAGTTTTATGTGCCCGGTGATGCAGACGAGGAGATTCACGAGGGATGACCACATGGGTTCTTTTACTTGTTTATTTCCTTTTTGGTAGATAGGATGGTCGTCTGTTCTTTAATTGTTGATAGGTTGATTTGTTTAGCCGGTAGCTAGGTTGGCGTAGTTTTTGTTTCTGGTTAATGAGCATGTTTAGATTTCATGTTTCTCGTTAGGTTGTGAATATGTTATTGCTTAATAAAGACGACCTGTTTTAGAAAATTAAGGATATGCTTGATCTGGTAGAGTTAGGTTCTGTTGTTGGTTGGAGATGCGAGATCTGACTCGTATCCTGTTTGTAGTTGTTCTGTGGAAGTTGTGGAGCTGAATGGACCAATATAGAAGTGTTGTTGTGTATAACACGTGTTTTAAAATTTTTGGTTTCGTTCTATGTATGCCGTTATGCTGCCGAAATTTTCGGAGCTCTCAGTTAGTTGAATAGGATTTAGTAATGTCATTAGGTTAGTTAATAATAAAACCTGGGGCGTTACAATACTACACATTCAAGTTTTGACCGTTCAATTATTTACGTTTAATAGTACGTTTGTGGTTTAGGAAAACTTATTATGCTATCACTGTCGAATTTCTCAGTCGAAAAGGATATTTCCCGGCCGGGAATCATATTGTTTGCATCCTGGTGCGTCGTCAGCTGAATAGATGGATGTGAGATAAGATGATAAATAAGAATAAAGAATAATTCAGCTAACACTTAGTGCAAGTATACACTGTCGCACGTAGTAATAAAAAAAACCTTAAAATCAAGTCATTTTTGCTCAGTCGAACGGTCTCGAATTTTTCCAGAAATGCGGTCGCATTTCATTTTTGCCTTTCAAGAAATGCGGTCGCATTTCTGGGGAATTCCAGCTTTTCCTCTGTTTTTCTGCACAACAACAAACTAAGTCAAATTCTCTTAAAATCAAGTCTTTTTAAGCACAAATAAGTTAGAGTCCGTTTGGAATACAATTTAATTTAAATGTTTTTTAAGAATGCATTTTTTAAAAAACATTTTGTATAAAAATTGTTGAGAATTTAAACACTCATATGTTTGGTTGCATTTCCTCGCAAATATTTTTATACACAAGTTTGTTTACTTAAGAAGTTTTTTTTTTTTAAAGTTGGTTTTAAGTGTTTCTCTCAAAATGGTTTATTTATCAATCTCATTTTCTAATAAGTCATTTTTATTGGTTGCCAAACACTAGAAATTTTTTCAAAATGATTTATTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCTTAAATTTGACAAAAGTGATTCTCAACACCCTAAATTATCGAAGTAAGCATATTTTGAGCTCGGGAACAGTAAATTGATCACAACATACAACATTTGGCCAAGAAATGAGCTAAATATAAGGGTAAAATAGGTATATTTTTTACCCTTATCACATTCTGACCGGAAATTTTCACTAAGAAACATTTTTGTAACCGGGAAATTTGGCAGTTGCTTAATAACGCCTTTTTTTTGTTTGTTCGTGTAGATAATGGCTCGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGAAAAGGAATATGAGTGTGGAGAGTTGAAGGGTTTCGACATAGACATTGGTATTGCATATAGTGACTTCTTAAGTCGATTATATAGATTAACCAGTATAAGTTTAGAGGAATTTGACCTTAGAGTAAGATGTCAACTCCAATTGAAGTCCAGGGCACTCGCGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACATGGAAGTCAGTCTCTGAAGTACCCATCTACATATCCACAATCCCAAAGTGTCCAAGTAACAAAACCTCGCGACCATTTCCCATCCCATGCGCCATGCCAAATAATACGTATAAGGTGGAGCAGAAATTCGTGAAGCATTGAAAATCGAAAATCCCGGTACAGTGTTCGACTTAGAACTTGAAGACGATGGACACTTTAAGCATGTGGTTATGGCACTAGGTGCCTATATTGGAGGGTTCAATAGCTCTATTTGTCTAGTACTAGTGGTTGATGGAACACACTTACGGGGAAAATTCTGTGGGAAGCTCCTTCTTGCGATCGGTGTAGATGGAAACAACCAAATATATCCTGTAGGGTGGGCCATTGCTGGGGGAGAAACTGATCAGTCATGGACGTAATTTTTTTTACAAATGGAACGTGCAGTTGGACAAGTTCCTGGTTTGGTCATTGTGTCTGATAGACATGCCAGCATCAGTAAGGCAGTCAAAACTGTATTCCCTAATGCATTTCACTACGTGTGTATCCAACACCTAGGGGAGAACCTAAAGACGCATTTTAAGACCGGGAACTTCATTAAAGTATTTGAGGGAGTTGCGAAGGCAATTTGCGAGGTCAAATTTAATGAGTACTGGCAGTAACTCTCAGAAAATGTTAGGACATACCTACACGGGGTCGGAGTTGAGAGGTGGGCTCGAGCATACTAGTGTGGTCGTCGGTATAACCAAATGACTACCAATCTTGTGGAGTGCACTAACTCCGTGTTGAAAGATGCATGAGAGGTACCAATCACTACATTTATGAAGCATATAAGAGGGTGGCTCCAAGCAAAATACTACAAACACAGGAATAAGCACTCTAGTAACCCCAGCCAGTGGTCAAAGTTTGCAACGACCATTTTGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGCTCAGACCTATTGCTCGATATGAGTTTGAGGTCGACGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACCTGTCGTGAATTTGAATATTACGAACTTCCATGCTCCCATGTGATTGCTGCATGCACTTATCGTAACATTGACTATCATACCCTTTGTTCCAGAGTCTACCATGTGGACTCCTTGATAGATGCATATGCACAGCCCATACAACCCCTTGGGCATGTGTCGGAGTGGTAG

mRNA sequence

ATGGGTAATCTGAAAGCTTACCGGAAGAGCCCGAACACGCTGGGACGAACCTTAAACCAGCCTAATCACACCCAAAATGCATGGAGAGAGAAGATTCAAACTTCCACCTCATGGATTGAGCCTCAAAACTCGCCATTCACACGTGCGAGTGCTCGCCGGAGAGAGGAGACGGCTCTGCAGAGACGATGTCAGCGCGCGAGAGACGAGCTTCACAAACCTCTAGCTACCGACGGAGAAGACGAATGGAGGAGAGAGAGACAGCCACGGACTGACGGTGTCAGAGAAAGACCGAAGGAAGCGAGAGGAAGATTGGTCTTCACGGGTCACACAGCCTGCTCGCAATGGAGAGAGACGAAACGGTGGCGAGAGCTTGGTCGGACGGTTCGGGCCATTTTGGACACTGTACAGCACGTATCGGTCATAGTTCAGTTATGTTCGGTGTGCTTAGAGCTTATTCCGTTATTTTTCCAGCAAGCGTTGATTTGGTTTAGGAGCGCTTGTAAGCTTGGTCGAAAAGGATATTTCCCGGCCGGGAATCATATTGTTTGCATCCTGATAATGGCTCGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGAAAAGGAATATGAGTGTGGAGAGTTGAAGGGTTTCGACATAGACATTGGTATTGCATATAGTGACTTCTTAAGTCGATTATATAGATTAACCAGTATAAGTTTAGAGGAATTTGACCTTAGAGTAAGATGTCAACTCCAATTGAAGTCCAGGGCACTCGCGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACATGGAAGAATAAGCACTCTAGTAACCCCAGCCAGTGGTCAAAGTTTGCAACGACCATTTTGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGCTCAGACCTATTGCTCGATATGAGTTTGAGGTCGACGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACCTGTCGTGAATTTGAATATTACGAACTTCCATGCTCCCATGTGATTGCTGCATGCACTTATCGTAACATTGACTATCATACCCTTTGTTCCAGAGTCTACCATGTGGACTCCTTGATAGATGCATATGCACAGCCCATACAACCCCTTGGGCATGTGTCGGAGTGGTAG

Coding sequence (CDS)

ATGGGTAATCTGAAAGCTTACCGGAAGAGCCCGAACACGCTGGGACGAACCTTAAACCAGCCTAATCACACCCAAAATGCATGGAGAGAGAAGATTCAAACTTCCACCTCATGGATTGAGCCTCAAAACTCGCCATTCACACGTGCGAGTGCTCGCCGGAGAGAGGAGACGGCTCTGCAGAGACGATGTCAGCGCGCGAGAGACGAGCTTCACAAACCTCTAGCTACCGACGGAGAAGACGAATGGAGGAGAGAGAGACAGCCACGGACTGACGGTGTCAGAGAAAGACCGAAGGAAGCGAGAGGAAGATTGGTCTTCACGGGTCACACAGCCTGCTCGCAATGGAGAGAGACGAAACGGTGGCGAGAGCTTGGTCGGACGGTTCGGGCCATTTTGGACACTGTACAGCACGTATCGGTCATAGTTCAGTTATGTTCGGTGTGCTTAGAGCTTATTCCGTTATTTTTCCAGCAAGCGTTGATTTGGTTTAGGAGCGCTTGTAAGCTTGGTCGAAAAGGATATTTCCCGGCCGGGAATCATATTGTTTGCATCCTGATAATGGCTCGTGTGTGGGTTTGTTATGGTGGTTTGTGGAATGAGAGGGAAAAGGAATATGAGTGTGGAGAGTTGAAGGGTTTCGACATAGACATTGGTATTGCATATAGTGACTTCTTAAGTCGATTATATAGATTAACCAGTATAAGTTTAGAGGAATTTGACCTTAGAGTAAGATGTCAACTCCAATTGAAGTCCAGGGCACTCGCGTTTGTTATTAGGAACGATGAAGACCTTAACACCTTCTTGACATGGAAGAATAAGCACTCTAGTAACCCCAGCCAGTGGTCAAAGTTTGCAACGACCATTTTGGAAAAAGTAGAGGAGAAGGCAAGGAGGCACGTGCTCAGACCTATTGCTCGATATGAGTTTGAGGTCGACGATGGACATTTGGGTGGACGTGTCAACCTTCACGCTAGAACATGCACCTGTCGTGAATTTGAATATTACGAACTTCCATGCTCCCATGTGATTGCTGCATGCACTTATCGTAACATTGACTATCATACCCTTTGTTCCAGAGTCTACCATGTGGACTCCTTGATAGATGCATATGCACAGCCCATACAACCCCTTGGGCATGTGTCGGAGTGGTAG

Protein sequence

MGNLKAYRKSPNTLGRTLNQPNHTQNAWREKIQTSTSWIEPQNSPFTRASARRREETALQRRCQRARDELHKPLATDGEDEWRRERQPRTDGVRERPKEARGRLVFTGHTACSQWRETKRWRELGRTVRAILDTVQHVSVIVQLCSVCLELIPLFFQQALIWFRSACKLGRKGYFPAGNHIVCILIMARVWVCYGGLWNEREKEYECGELKGFDIDIGIAYSDFLSRLYRLTSISLEEFDLRVRCQLQLKSRALAFVIRNDEDLNTFLTWKNKHSSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW
Homology
[Close]
BLAST of Spg020345 vs. NCBI nr
Match: XP_038890792.1 (uncharacterized protein LOC120080248 [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 1.6e-27
Identity = 58/96 (60.42%), Postives = 74/96 (77.08%), Query Frame = 0 

Query: 288 ILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACT 347
           I+     KA +H +RPI ++EFEV DG LGGRVN+HARTCTCR+F+YYE+ CSH IAAC 
Sbjct: 3   IIRDATNKASKHEVRPIDQHEFEVIDGGLGGRVNIHARTCTCRKFDYYEISCSHAIAACR 62

Query: 348 YRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
            RNID  + CS VY +D+++ AYA+PI+PLGH  EW
Sbjct: 63  VRNIDSTSFCSWVYSIDAMLAAYAEPIRPLGHFLEW 98

[Close]
BLAST of Spg020345 vs. NCBI nr
Match: XP_038895917.1 (uncharacterized protein LOC120084090 [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-25
Identity = 58/109 (53.21%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 275 SSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEY 334
           S++ S+ S +A TI     +KA RH +RPI ++EFE+ DG L GR N+H R CTC +F+Y
Sbjct: 4   SNSTSRLSDYAMTITRDATDKASRHEVRPIDQHEFEMIDGGLRGRANIHTRICTCLKFDY 63

Query: 335 YELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
           YE+PCSHVIAAC  +NID  +LCS VY ++S++ AYA+PI+  GH S W
Sbjct: 64  YEIPCSHVIAACRVQNIDPISLCSWVYSIESVLAAYAEPIRLAGHFSGW 112

[Close]
BLAST of Spg020345 vs. NCBI nr
Match: XP_022154803.1 (uncharacterized protein LOC111021969 [Momordica charantia])

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-25
Identity = 56/109 (51.38%), Postives = 77/109 (70.64%), Query Frame = 0 

Query: 275 SSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEY 334
           SS  +  +++A  IL++V E+AR H +RPI R+EFEV DG    RVN++++TCTC++F Y
Sbjct: 673 SSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGATKVRVNINSKTCTCKQFYY 732

Query: 335 YELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
           YE+PCSH IA    RNI  HTLCS  Y +D+LI AY +P+ PLG   +W
Sbjct: 733 YEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYPLGDEEDW 781

[Close]
BLAST of Spg020345 vs. NCBI nr
Match: XP_038904373.1 (uncharacterized protein LOC120090731 [Benincasa hispida])

HSP 1 Score: 126.3 bits (316), Expect = 5.6e-25
Identity = 54/96 (56.25%), Postives = 74/96 (77.08%), Query Frame = 0 

Query: 288 ILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAACT 347
           I+    +KA R+ +RPI +YEFEV +G L GRVN+H RTCTCR+F+YY++PCSH IAAC 
Sbjct: 3   IILDAADKASRYEVRPIDQYEFEVINGGLEGRVNIHTRTCTCRKFDYYKIPCSHAIAACR 62

Query: 348 YRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
            +NID  +LCS VY +D+++ AYA+P++ LGH  EW
Sbjct: 63  VQNIDPTSLCSWVYSIDAILAAYAEPVRSLGHFLEW 98

[Close]
BLAST of Spg020345 vs. NCBI nr
Match: XP_022147768.1 (uncharacterized protein LOC111016623 [Momordica charantia])

HSP 1 Score: 119.4 bits (298), Expect = 6.8e-23
Identity = 51/98 (52.04%), Postives = 75/98 (76.53%), Query Frame = 0 

Query: 282 SKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSH 341
           +++A  IL +  E+ARRH +RPI  YEFEV DG    RVNL+++TC+C++F+YY++PCSH
Sbjct: 327 TEYAEDILRQSSEQARRHTIRPIDNYEFEVHDGSNKVRVNLNSKTCSCKQFDYYQIPCSH 386

Query: 342 VIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGH 380
            IAA   +N++ +TLCS  Y +++LI AYA+PI PLG+
Sbjct: 387 AIAAAVLQNVNRYTLCSSKYKLETLITAYAEPIYPLGN 424

[Close]
BLAST of Spg020345 vs. ExPASy TrEMBL
Match: A0A6J1DLB0 (uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021969 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-25
Identity = 56/109 (51.38%), Postives = 77/109 (70.64%), Query Frame = 0 

Query: 275 SSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEY 334
           SS  +  +++A  IL++V E+AR H +RPI R+EFEV DG    RVN++++TCTC++F Y
Sbjct: 673 SSRGTFLTEYAENILKEVAEQARYHHVRPIDRFEFEVHDGATKVRVNINSKTCTCKQFYY 732

Query: 335 YELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
           YE+PCSH IA    RNI  HTLCS  Y +D+LI AY +P+ PLG   +W
Sbjct: 733 YEIPCSHAIAGAVLRNISVHTLCSDRYRIDTLIQAYVEPVYPLGDEEDW 781

[Close]
BLAST of Spg020345 vs. ExPASy TrEMBL
Match: A0A6J1E2V3 (uncharacterized protein LOC111025530 OS=Momordica charantia OX=3673 GN=LOC111025530 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-23
Identity = 65/157 (41.40%), Postives = 93/157 (59.24%), Query Frame = 0 

Query: 227 RLYRLTSISLEEFDLRVRCQLQLKSRALAFVIRNDEDLNTFLTWKNKHSSNPSQWSKFAT 286
           R   +T+ S E  ++ +R  ++L    +   IR D     F   +   S+  +  S +A 
Sbjct: 296 RYENMTTNSAESVNVLLREAIELPITKIVEFIR-DLLQRWFHVRRTHWSTQNTSHSDYAE 355

Query: 287 TILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHVIAAC 346
             L    EK+RR+ ++P+    F V+DG L G V+L+ARTCTC EF+Y  +PCSH IAA 
Sbjct: 356 EQLALQFEKSRRYTVKPVDWCMFHVEDGGLDGTVDLNARTCTCMEFQYMGIPCSHAIAAA 415

Query: 347 TYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
            ++NI+ HTL    Y VDSLI AYA+PI P+GH+SEW
Sbjct: 416 RHKNINCHTLIDPCYSVDSLISAYAEPILPIGHMSEW 451

[Close]
BLAST of Spg020345 vs. ExPASy TrEMBL
Match: A0A6J1D278 (uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016623 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-23
Identity = 51/98 (52.04%), Postives = 75/98 (76.53%), Query Frame = 0 

Query: 282 SKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSH 341
           +++A  IL +  E+ARRH +RPI  YEFEV DG    RVNL+++TC+C++F+YY++PCSH
Sbjct: 327 TEYAEDILRQSSEQARRHTIRPIDNYEFEVHDGSNKVRVNLNSKTCSCKQFDYYQIPCSH 386

Query: 342 VIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGH 380
            IAA   +N++ +TLCS  Y +++LI AYA+PI PLG+
Sbjct: 387 AIAAAVLQNVNRYTLCSSKYKLETLITAYAEPIYPLGN 424

[Close]
BLAST of Spg020345 vs. ExPASy TrEMBL
Match: A0A6J1D127 (uncharacterized protein LOC111016625 OS=Momordica charantia OX=3673 GN=LOC111016625 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.3e-23
Identity = 52/109 (47.71%), Postives = 77/109 (70.64%), Query Frame = 0 

Query: 275 SSNPSQWSKFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEY 334
           SS  +  +++A  IL+K  E+AR H +RPI R+EF+V DG     VNL+++TCTC++F+Y
Sbjct: 44  SSRGTVLTEYAEIILKKEAERARYHHVRPIDRFEFKVHDGTSKVSVNLNSKTCTCKQFDY 103

Query: 335 YELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
           +E+PCSH IA   +RNI  H+LCS  Y +++LI  YA+P+ PLG   +W
Sbjct: 104 FEIPCSHAIAGAVFRNISVHSLCSDRYQIETLILGYAEPVYPLGDEEDW 152

[Close]
BLAST of Spg020345 vs. ExPASy TrEMBL
Match: A0A6J1DE23 (uncharacterized protein LOC111019549 OS=Momordica charantia OX=3673 GN=LOC111019549 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 9.6e-23
Identity = 51/101 (50.50%), Postives = 71/101 (70.30%), Query Frame = 0 

Query: 283 KFATTILEKVEEKARRHVLRPIARYEFEVDDGHLGGRVNLHARTCTCREFEYYELPCSHV 342
           ++   IL++V E+AR H +RPI  +EFEV DG    RVN++++T TC++F+YYE+PCSH 
Sbjct: 198 EYVENILKEVAEQARYHHVRPIHCFEFEVHDGATKVRVNINSKTYTCKQFDYYEIPCSHA 257

Query: 343 IAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
           I     RNI  HTLCS  Y +D+LI AYA+P+ PLG   +W
Sbjct: 258 ITEVVLRNISVHTLCSDKYRIDTLIQAYAEPVYPLGDEEDW 298

[Close]
BLAST of Spg020345 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 49.3 bits (116), Expect = 8.1e-06
Identity = 28/105 (26.67%), Postives = 47/105 (44.76%), Query Frame = 0 

Query: 284 FATTILEKVEE---KARRHVLRPIARYEFEVDDGHLGGR--VNLHARTCTCREFEYYELP 343
           +    ++K+EE    +  +V+  + R  F+V +        V L+  TCTCR+F+ Y+ P
Sbjct: 595 YTEPFMDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFP 654

Query: 344 CSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPLGHVSEW 384
           C H +A      I+        Y V+     YA    P+  V+ W
Sbjct: 655 CLHALAVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAW 699

[Close]
BLAST of Spg020345 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 45.1 bits (105), Expect = 1.5e-04
Identity = 21/66 (31.82%), Postives = 30/66 (45.45%), Query Frame = 0 

Query: 318 GRVNLHARTCTCREFEYYELPCSHVIAACTYRNIDYHTLCSRVYHVDSLIDAYAQPIQPL 377
           G V L+  TCTC EF+  + PC H +A C    I+        Y V+     Y+    P+
Sbjct: 650 GIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKFSPV 709

Query: 378 GHVSEW 384
             +S W
Sbjct: 710 PELSAW 715

The following BLAST results are available for this feature:
BLAST of Spg020345 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038890792.11.6e-2760.42uncharacterized protein LOC120080248 [Benincasa hispida][more]
XP_038895917.11.5e-2553.21uncharacterized protein LOC120084090 [Benincasa hispida][more]
XP_022154803.15.6e-2551.38uncharacterized protein LOC111021969 [Momordica charantia][more]
XP_038904373.15.6e-2556.25uncharacterized protein LOC120090731 [Benincasa hispida][more]
XP_022147768.16.8e-2352.04uncharacterized protein LOC111016623 [Momordica charantia][more]
BLAST of Spg020345 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg020345 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DLB02.7e-2551.38uncharacterized protein LOC111021969 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A6J1E2V33.3e-2341.40uncharacterized protein LOC111025530 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1D2783.3e-2352.04uncharacterized protein LOC111016623 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1D1273.3e-2347.71uncharacterized protein LOC111016625 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
A0A6J1DE239.6e-2350.50uncharacterized protein LOC111019549 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
BLAST of Spg020345 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64260.18.1e-0626.67MuDR family transposase [more]
AT1G49920.11.5e-0431.82MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 325..352
e-value: 1.0E-9
score: 48.3
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 320..349
e-value: 2.1E-8
score: 33.7
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 318..350
score: 10.088695
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020345.1Spg020345.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
molecular_function GO:0008270 zinc ion binding