Spg020218 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCGTCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGGTAGATTCGATTTGGTTCGATTCGATTCTTCTTCAAGTTGAGCGACTTACTTTGAGGCCTTTTGTTTCGCTACTGCTGGTGTTGTTGTTGTTGTTGTTTGATTTTGGGGATTCGATCGATTCGAATTGTTGGATTTCTGTTTAGGATCTTGAATCTTGAATCTCTCTTCGTTGTTGTACATTGAAGTTCGAGTTTGTTCTGAAATTAGTCGTGATGATGGATTTTCCTTTCTTTCTTGTTCTTCTTTGATTCTGTTTCTGATCCGTTTTAAGCTGTGGATTTTTCAGATTATCTGTTTCTTCGTTTTCTTGTAATTACGTCATGTTGATGCGATTTGTTGAACAGATTAATGAAATCGATTCGATTTTGAGCAAATTTTGTTGGTTTCTTCTCTGGTTTTTTCAGCCTTTCCAATGGGCATGGGCAAAGAAATGGTACCTGCTTTTCAGACTTTTGCTTTTACTTTGAAAAAAACACACAAAAAGAAAAAGGTCAAATCATTTTTCTTCAAATAATTTTATTATTATTATTTTTTTGAAATGACGTTATAAAAGAATGTATATTTACATGGCAAAGTATTTTTTCTAAATAATAAACTTTTGTAATTCCTTGAACAATGGGAAATTTATTTTTAAATTTTAAAATAAATTGATATAAGTATAAGATTTGAATGGCTTTGAACTTCATGATTTATTACATTATGGTTTTTTATTTCTTAAAAATATACATTTTTGTTCCAAAATAAACATTTTGATTTTGATATTATGAAAATGTCTATTTTAATCTCCCGAATTTATTTTAAAAATGTTATTGTTTTTTATTAATGTTATTATTATACTATTTAATATAGCAAAATACTCTCTTTTCTCTCAACTTATGACATTTTTTTTTTAAATTTTTTTCCAAGTATATCAACATTTGTGGGGATTTGAACCTCTGAATTTTTTAGTGGAGGATTTGAACCTTTAATCTTTTTGGTCGAGGACACATGTCATTTAATGCATAGTCGCTTTGGCCAACCCATGACATTCTAGAACATGCATGTGTCCATTGCTAAAACATACGTTTAAAGTCACTTTGTACATCGCCAACAAGAGCATAACTCAAGGCATAAAGTTGTATTGATAACCACGAGGTCTGAGTATCGTATCTTGTGTTTTTAAAGTTGTATCTCGTTTTTCGTTTTTGAGTTGTTCACCAGGAAACTTCACTATGTTAAACAATTATTACCATCATAATTCTCTTTTCATTCCAATAAAGTTTAGGAACTAAACCTGTATTTTACAAAATTGATATTTTTTTTTACCTTGTATTGCAAACGAACATATTTAATAAATAAAATAAGGAAAAAAAAAAAAAAAAGGCATCCACATCCACATCCACATGTTAGTGTCACATGTATGCTAGAGCCAAACCTCTCAAAAGATAACGATTATCCTTATCTTTTATAGAAGGTATGACGTACGATATTTTTAGAAAATCTCAACACAAAAATATCTGTATGAATTGGATTGGAATCTAATAAATTATACAACAATTACAATGGACAGGTTTTTCATTATTATATTTCTAAATAATCACAACGTTATGTAGTTATTTATTTATTTTTTTTTTGGAAGAATACAAACTTGTTAGCAAATAGGGGTCTGTTTGGTAATGTTCTCGTTTCTTATTTCTTGTTTCTAATTTTATTAAGAAATCTAAGCATTTAATATGTATGTTTCTTGTCTCTCATTTTTTTAGAAACACTCCCAAAATTTATATAGAACTTTTGGGAACAACTAAAACTAGTTTCTCCTTTTTTGTTTCCGTTTCCATTTTTTTTCCAAAACATAAATAATAATATAGGTTTATTGTTATTGAATGTATAGGTGTTAGGGTGAAATTCTATTTTTCTTTATTAAAAAGGGGTTTTTACAAGAATGGGCTGAAATCAGCCCATATATTTCACTTTTGTCCAAAAACTTTATAATTTTCATTTCAGTCCAGCCCATTTTTATTAATTGTAGTTCATTTACCAATTTGACCCTTTGATAATCAAAATTAAAAAATAAAAAAAGAAAATACAGAAAAGGAAAAGACGTGATTATATGGCATTTGAAAATAATCCCCCAATTTTCGTCCACAATCGTCCATCACAAACCAAACACCAAGAACAGGTATTTTTCCATCACATACCATTTTTTACATCACAGACCATTTTTCACCCTTTCATTTTCGTCAGTTTTCGTGGTTTGTTGTGATTCTTCCATTTTCGTCCATCACAAAACCGGTATTTTAGAATTCCATACCGCCGAATCTTTATTCCCATATTGGGTATTTAAAAATTCATACCGGGTATTTAAAAATCATACCTGGTATTTTAGAAATCCATACTGGATATTTAACAAGGAATTGTAGAATATGCAAAAAAAAAAAAAAAAAAACCCAGATCTATACGCAAAAAAAAAAATTATTGCAAATTTCAAAATTCATACCGGGTATTTAAAAATTCATACCCAGTATTTAGAAATCATACCGGGTATTTAAAAATGTTGTGTACTGTCAAATTTCAAAGAATGCATGCAAGAGAAGAGCAGAGACAAAATTCTGAAACCAATAATAAAAAATCGTGAGAGAAGACCTCCTATCAACGTCTGTTCATCCCCTTTCAAAAATCAGTAGGTATATAGTGAATTTTTGGATGCTTACGAATACGAATAACCAAGTGATGGGGGGTGATCCCATATGGACTTTTCCATCGGTTAATAACAGCGGTTTGTATAGAGGGAAGATGTTGAGTGGGTTGCATTTCATGAACTTTCTGGCCCCAGTGGCGTTGGTTCCGTGTCAGCAATTCGAGTCAGGCACTGGCGGAGGAAAATTTGATTGTTTGGAAACAAATGAAATTGGATGGCTGTTGGACGTTCTTCGACAGATGCAAAACAAGGTTTTGCGAAATTGGCTAAATTTGAAAATTGAAAAGAATAGGGCAGACAGTGGACAAACACTTAAATGA ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCGTCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGATTATCTGTTTCTTCGTTTTCTTGTAATTACGTCATGTTGATGCGATTTGTTGAACAGATTAATGAAATCGATTCGATTTTGAGCAAATTTTGTTGGTTTCTTCTCTGGTTTTTTCAGCCTTTCCAATGGGCATGGGCAAAGAAATGCGGTTTGTATAGAGGGAAGATGTTGAGTGGGTTGCATTTCATGAACTTTCTGGCCCCAGTGGCGTTGGTTCCGTGTCAGCAATTCGAGTCAGGCACTGGCGGAGGAAAATTTGATTGTTTGGAAACAAATGAAATTGGATGGCTGTTGGACGTTCTTCGACAGATGCAAAACAAGGTTTTGCGAAATTGGCTAAATTTGAAAATTGAAAAGAATAGGGCAGACAGTGGACAAACACTTAAATGA ATGCTTCAGCTGTTCTTCGCCGTCGCTTTCTCGGCAGTGCCATTGACGCTCTATGTGCCGCCGATTCGGAGCCTCAGTCTGTTCGTCGAAACCCTAGAAGATCTTCTCCGTCACACCGCCATTCATACGCTCAGAGCTTATCCTCGCTTTCGCCTCGCCTTCTCTCGCCTCTTCGGCTCTGTATTCAGCGTTTCTTATTCCAGATTATCTGTTTCTTCGTTTTCTTGTAATTACGTCATGTTGATGCGATTTGTTGAACAGATTAATGAAATCGATTCGATTTTGAGCAAATTTTGTTGGTTTCTTCTCTGGTTTTTTCAGCCTTTCCAATGGGCATGGGCAAAGAAATGCGGTTTGTATAGAGGGAAGATGTTGAGTGGGTTGCATTTCATGAACTTTCTGGCCCCAGTGGCGTTGGTTCCGTGTCAGCAATTCGAGTCAGGCACTGGCGGAGGAAAATTTGATTGTTTGGAAACAAATGAAATTGGATGGCTGTTGGACGTTCTTCGACAGATGCAAAACAAGGTTTTGCGAAATTGGCTAAATTTGAAAATTGAAAAGAATAGGGCAGACAGTGGACAAACACTTAAATGA MLQLFFAVAFSAVPLTLYVPPIRSLSLFVETLEDLLRHTAIHTLRAYPRFRLAFSRLFGSVFSVSYSRLSVSSFSCNYVMLMRFVEQINEIDSILSKFCWFLLWFFQPFQWAWAKKCGLYRGKMLSGLHFMNFLAPVALVPCQQFESGTGGGKFDCLETNEIGWLLDVLRQMQNKVLRNWLNLKIEKNRADSGQTLK Homology
BLAST of Spg020218 vs. NCBI nr
Match: KAE8649764.1 (hypothetical protein Csa_012384 [Cucumis sativus]) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-23 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of Spg020218 vs. NCBI nr
Match: KAG6603254.1 (hypothetical protein SDJN03_03863, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-23 Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Spg020218 vs. NCBI nr
Match: KAG7037385.1 (hypothetical protein SDJN02_01010, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-23 Identity = 69/95 (72.63%), Postives = 75/95 (78.95%), Query Frame = 0
BLAST of Spg020218 vs. NCBI nr
Match: KAA0060071.1 (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK29882.1 RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 119.8 bits (299), Expect = 2.7e-23 Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0
BLAST of Spg020218 vs. NCBI nr
Match: KAG6595630.1 (hypothetical protein SDJN03_12183, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027603.1 hypothetical protein SDJN02_11617, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.0 bits (271), Expect = 4.7e-20 Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of Spg020218 vs. ExPASy TrEMBL
Match: A0A0A0KZF7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G569720 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 5.8e-24 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of Spg020218 vs. ExPASy TrEMBL
Match: A0A5A7V2T5 (RING/FYVE/PHD zinc finger superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001360 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-23 Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0
BLAST of Spg020218 vs. ExPASy TrEMBL
Match: A0A6P6AMC9 (uncharacterized protein LOC111310902 isoform X2 OS=Durio zibethinus OX=66656 GN=LOC111310902 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 5.6e-19 Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0
BLAST of Spg020218 vs. ExPASy TrEMBL
Match: A0A6P6AMB2 (uncharacterized protein LOC111310902 isoform X1 OS=Durio zibethinus OX=66656 GN=LOC111310902 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 9.6e-19 Identity = 62/98 (63.27%), Postives = 72/98 (73.47%), Query Frame = 0
BLAST of Spg020218 vs. ExPASy TrEMBL
Match: A0A2C9V7E1 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G026700 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 4.8e-18 Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0
BLAST of Spg020218 vs. TAIR 10
Match: AT3G52105.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13 Identity = 36/65 (55.38%), Postives = 49/65 (75.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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