Spg020156 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg020156
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold1: 22169831 .. 22170334 (+)
RNA-Seq Expression	Spg020156
Synteny	Spg020156

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTCCCTGTTACCCCCGAAGCACCGAAAGTTAAAACGAAGAAGAAGAAAACACCAGAAGAAAAAGAGGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGATCAAGAAGTTGTTCAGAAAGTGGCGGAGGATGTTGTTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATCCAGAGCAGACTGACCCGATAGTTGCGGATACAGAGGCAGTTCGAGAAGAAAATGCAGAAGAAGTTCAAGAAAAGCAGACTTAGAATGTGCAAGAAGAACAGGCAGAGGTTGCGCCTGAAGAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGGCGGAAGTGCCCAAACGCCGCCGTATAAAGCGAAAAGCGAGCCATGTTAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAA

mRNA sequence

ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTCCCTGTTACCCCCGAAGCACCGAAAGTTAAAACGAAGAAGAAGAAAACACCAGAAGAAAAAGAGGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGATCAAGAAGTTGTTCAGAAAGTGGCGGAGGATGTTGTTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATCCAGAGCAGACTGACCCGATAGTTGCGGATACAGAGGCAGTTCGAGAAGAAAATGCAGAAGAAGAGGCTCGTGTGGAGGTGATCATGGCGGAAGTGCCCAAACGCCGCCGTATAAAGCGAAAAGCGAGCCATGTTAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAA

Coding sequence (CDS)

ATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTCCCTGTTACCCCCGAAGCACCGAAAGTTAAAACGAAGAAGAAGAAAACACCAGAAGAAAAAGAGGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGATCAAGAAGTTGTTCAGAAAGTGGCGGAGGATGTTGTTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATCCAGAGCAGACTGACCCGATAGTTGCGGATACAGAGGCAGTTCGAGAAGAAAATGCAGAAGAAGAGGCTCGTGTGGAGGTGATCATGGCGGAAGTGCCCAAACGCCGCCGTATAAAGCGAAAAGCGAGCCATGTTAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAA

Protein sequence

MAKTRARKERDNEEEEVPVTPEAPKVKTKKKKTPEEKEAKRRRRQQRAEDQEVVQKVAEDVVVEEDPKEPEGQNPEQTDPIVADTEAVREENAEEEARVEVIMAEVPKRRRIKRKASHVKVVRTDTPSPPTTDSERENAEKE

Homology

The following BLAST results are available for this feature:

BLAST of Spg020156 vs.


Match Name	E-value	Identity	Description

BLAST of Spg020156 vs.


Match Name	E-value	Identity	Description

BLAST of Spg020156 vs.


Match Name	E-value	Identity	Description

BLAST of Spg020156 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg020156.1	Spg020156.1	mRNA