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Spg020092 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGAAATGAGAAATGAGCTCTTCCCCAAAAGTGGAATGTTCCTCTCCAAGAAAGGAATCAATTTGACTTGAACGACTCTTCCCTTTTATAGAATGAAGACAAGCTTAAATTAGGTTGACCTAGACACGTGGATGGCTCTCCTTGCTCCTCAAATTCGAGAATAGCTCAACTAACTTCAGTTCGTTAAAATGGATAACGAGCTGTGACGTGGCAATTTTGCTCCCTGTTTTGCTGGATCGCAGATTTTGCTCCCTCAAGTCGCTCAACAATATATTCTGCACAAAATAACTTCCAAAGCATCAATTCTTCCAAATGGGTTAGAACATGCAATAATCATCTAAAAGCAACCCTATTTAGCACTAATGACACACAAAACATTATAAAACTAAGGCCTAAATAACTCCCTTTTGGAGAGCTATCAGAGTGGCAGCAAGGCGAAAGCCTCCTCTTCAAAGGGCAAAAGTCCATCTTCCTCTTCTTCAACACCTCCTCCTATGAGTGCTGATCAATATGCTATGGATCTAGGGTTCACTCTAGTAACCCGATCACGAGCAAGAACGGGTGGCATACGCCCAATTTCTCCAATGGAGTCACCTACTCCACCTCTAAGGCCTTCAGCCAATTTAGTCCGTCCTTCTGGCGGAATTACTCAATTGAGACCTCCTGTCTCACCTTCTTCTAGAACGGGATCATCTATCCTGTCTCCTTCAACTTACTCTCAGGCGGTTTCTCCAGAAAAGAGGTTCATACCTCATCCTGAGATTAAATCATATTTTCAAAAATCCCTAGTTATTAATGAACCCATCATTGAGCGAGAATTCCAAGGCCTCAAACTAGAAGAAACTATTTCAAATATGTATCCTTCAGGATTCAATTTCATCCCTGAAGATCTAAATAAAACCAGAACCTTTTATGAGTTCATTTTTGTAGACACCAAGTCTGCAGAAATAACGCTCATATTCCCGACAAAAATGATCCTTCCTGGATCACCTACTCCAAATTAAAAATTTTCAAGGCTTTGAATCCAACCCATTGGAATCAAGGTATATACCACAGATAAATCCTTCTCAAAACCATTCGTACCTCAGACATATTCTTACCGAGATTACATAAGGGCCTGGTATAATGTTATGTGGTACTCAAACTATAATCACTCATGGTTCATTTCTTTTTGTCAAAATGCTTACAAAATCAATTTTCCCCTATGGCTCATTCAGTGGTGGAATACATTTGGAATGACGGATGGTATTTTACCAACTCCCCTGCAGGAATCATATTTCTATTTTGCAAGAACAATTCAAAAAACATTATTTCATAATTCTATGAGATTTAGTTTATATTTCCAAATTCCAGGATATTCTGCTGGAATTGATTAACCAACTCATATCCCCAGTACAAAACTGTTACAAAAATTCTCAAAATAAAATGGTGGGATAAATATAATTTCCAACACGCCACCATAAAAAATATCAAAGAATGGTTCGCAGAGAATGGCTATCTTCAAGACCTTGATATCAAGAAGAACGCAGAGTTTTTAAATGACAAATCAAAACTTCTGGCAGCTCTAGCACATACTACCTCTGATGCAGACTTCCAGAGGATTCTTCAAAGGGTGACATCTTTAAGAAGTGGTTCTCCAACCTCTTCTGTCCAAGAAGAAGAAGAAAAAGCAGATCCAGAGTACGATCTGGACGATCCATATCTCAACTCACAACCTATGTGA ATGATGGAAATGAGAAATGAGCTCTTCCCCAAAAGTGGAATCTATCAGAGTGGCAGCAAGGCGAAAGCCTCCTCTTCAAAGGGCAAAAGTCCATCTTCCTCTTCTTCAACACCTCCTCCTATGAGTGCTGATCAATATGCTATGGATCTAGGGTTCACTCTAGTAACCCGATCACGAGCAAGAACGGGTGGCATACGCCCAATTTCTCCAATGGAGTCACCTACTCCACCTCTAAGGCCTTCAGCCAATTTAGTCCGTCCTTCTGGCGGAATTACTCAATTGAGACCTCCTGTCTCACCTTCTTCTAGAACGGGATCATCTATCCTGTCTCCTTCAACTTACTCTCAGGCGGTTTCTCCAGAAAAGAGGTTCATACCTCATCCTGAGATTAAATCATATTTTCAAAAATCCCTATACAAAACTGTTACAAAAATTCTCAAAATAAAATGGTGGGATAAATATAATTTCCAACACGCCACCATAAAAAATATCAAAGAATGGTTCGCAGAGAATGGCTATCTTCAAGACCTTGATATCAAGAAGAACGCAGAGTTTTTAAATGACAAATCAAAACTTCTGGCAGCTCTAGCACATACTACCTCTGATGCAGACTTCCAGAGGATTCTTCAAAGGGTGACATCTTTAAGAAGTGGTTCTCCAACCTCTTCTGTCCAAGAAGAAGAAGAAAAAGCAGATCCAGAGTACGATCTGGACGATCCATATCTCAACTCACAACCTATGTGA ATGATGGAAATGAGAAATGAGCTCTTCCCCAAAAGTGGAATCTATCAGAGTGGCAGCAAGGCGAAAGCCTCCTCTTCAAAGGGCAAAAGTCCATCTTCCTCTTCTTCAACACCTCCTCCTATGAGTGCTGATCAATATGCTATGGATCTAGGGTTCACTCTAGTAACCCGATCACGAGCAAGAACGGGTGGCATACGCCCAATTTCTCCAATGGAGTCACCTACTCCACCTCTAAGGCCTTCAGCCAATTTAGTCCGTCCTTCTGGCGGAATTACTCAATTGAGACCTCCTGTCTCACCTTCTTCTAGAACGGGATCATCTATCCTGTCTCCTTCAACTTACTCTCAGGCGGTTTCTCCAGAAAAGAGGTTCATACCTCATCCTGAGATTAAATCATATTTTCAAAAATCCCTATACAAAACTGTTACAAAAATTCTCAAAATAAAATGGTGGGATAAATATAATTTCCAACACGCCACCATAAAAAATATCAAAGAATGGTTCGCAGAGAATGGCTATCTTCAAGACCTTGATATCAAGAAGAACGCAGAGTTTTTAAATGACAAATCAAAACTTCTGGCAGCTCTAGCACATACTACCTCTGATGCAGACTTCCAGAGGATTCTTCAAAGGGTGACATCTTTAAGAAGTGGTTCTCCAACCTCTTCTGTCCAAGAAGAAGAAGAAAAAGCAGATCCAGAGTACGATCTGGACGATCCATATCTCAACTCACAACCTATGTGA MMEMRNELFPKSGIYQSGSKAKASSSKGKSPSSSSSTPPPMSADQYAMDLGFTLVTRSRARTGGIRPISPMESPTPPLRPSANLVRPSGGITQLRPPVSPSSRTGSSILSPSTYSQAVSPEKRFIPHPEIKSYFQKSLYKTVTKILKIKWWDKYNFQHATIKNIKEWFAENGYLQDLDIKKNAEFLNDKSKLLAALAHTTSDADFQRILQRVTSLRSGSPTSSVQEEEEKADPEYDLDDPYLNSQPM Homology
BLAST of Spg020092 vs. NCBI nr
Match: TYJ98361.1 (hypothetical protein E5676_scaffold232G00950 [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 2.2e-43 Identity = 119/230 (51.74%), Postives = 151/230 (65.65%), Query Frame = 0
BLAST of Spg020092 vs. NCBI nr
Match: KAA0049709.1 (hypothetical protein E6C27_scaffold76G00530 [Cucumis melo var. makuwa]) HSP 1 Score: 149.8 bits (377), Expect = 3.0e-32 Identity = 107/228 (46.93%), Postives = 126/228 (55.26%), Query Frame = 0
BLAST of Spg020092 vs. NCBI nr
Match: KAA0059031.1 (polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 142.9 bits (359), Expect = 3.7e-30 Identity = 84/131 (64.12%), Postives = 96/131 (73.28%), Query Frame = 0
BLAST of Spg020092 vs. NCBI nr
Match: KAA0034823.1 (hypothetical protein E6C27_scaffold213G00570 [Cucumis melo var. makuwa]) HSP 1 Score: 142.1 bits (357), Expect = 6.3e-30 Identity = 75/108 (69.44%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Spg020092 vs. NCBI nr
Match: KAA0066384.1 (hypothetical protein E6C27_scaffold21G004590 [Cucumis melo var. makuwa] >TYK00900.1 hypothetical protein E5676_scaffold602G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 134.4 bits (337), Expect = 1.3e-27 Identity = 97/226 (42.92%), Postives = 122/226 (53.98%), Query Frame = 0
BLAST of Spg020092 vs. ExPASy TrEMBL
Match: A0A5D3BI61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00950 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.1e-43 Identity = 119/230 (51.74%), Postives = 151/230 (65.65%), Query Frame = 0
BLAST of Spg020092 vs. ExPASy TrEMBL
Match: A0A5A7U8A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G00530 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 1.5e-32 Identity = 107/228 (46.93%), Postives = 126/228 (55.26%), Query Frame = 0
BLAST of Spg020092 vs. ExPASy TrEMBL
Match: A0A5A7UZX0 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00530 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 1.8e-30 Identity = 84/131 (64.12%), Postives = 96/131 (73.28%), Query Frame = 0
BLAST of Spg020092 vs. ExPASy TrEMBL
Match: A0A5A7SWC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold213G00570 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.1e-30 Identity = 75/108 (69.44%), Postives = 87/108 (80.56%), Query Frame = 0
BLAST of Spg020092 vs. ExPASy TrEMBL
Match: A0A5D3BPD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00610 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 6.4e-28 Identity = 97/226 (42.92%), Postives = 122/226 (53.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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