Spg020063 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020063
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncysteine proteinase inhibitor 6-like
Locationscaffold1: 25951243 .. 25954827 (-)
RNA-Seq ExpressionSpg020063
SyntenySpg020063
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGTACATCCGGTTTAAAAGTGGTTCAGATCTGTAGCTAAGGGTTTAGAGTGGTAGTAGCGTCTCTAGGTTAGAGGTTGGGAAACCTGGGGCGTTACATACATTGACTATGAGGATTGAGGTTTGAGTCTTGACATATTCAATCACTTGAATCTCTATCCTTTTATGCTTTTATGCTTGCTTGAAGATTCGAAAGGTTTAAGTTTGGGGTAATTTGATAGCACGAATTTCGTGCTAGTTTATTTGTCTATTTAATGCATGATTTTTCTTAATGCAGTGCGTAAAATGATTGATTTCAAGATAATTTGATGTTCGGGATATTTAGTAGTTCTCCAGATGAAGAGGGCATTTTTGGAATATAAAAAAAAATCAAATTTAGTTCAAGAAAGTGAAGGTAAAGGCAATAGTCAATAGTGGATGAATTGGAGCTAAAAAGGCAAAGAGCACAACGTCGAGATGCATTGCTCAATGTTGTACCAAAGGGTCCAACAGCGACGCTGTTGCCAACGTCTTGAAGCCAGAAACATGTGCAAGACAACGTAGCCTCATCAAAATTCGAAGCATTGATACGTTTAAATTTCTACACTCGTTGCTGCTTCTATCAACTGCTTGTGATCTGACGTCTGAAGAGCTTGCTGCGATGGCAAGTGGAGAAGAGAGACATGGGAGGTTGGCTGGCGATTGCTGCTTCGTTGAGAAACAAGATGATAAAACTGAAGAAGATGGTGGTGGTATAATTTTGCATTTGTTTAAATGATAAGTTAGGGTTTTGCTAGGCTCCAATTTTCATTTTTTTACAATTTTTCCACAAGAGTCAATTAAATCCCTTCCAACCAAATTAAAACTCCAATTAACCCTCCAAAAGTTTCTCAATTAAATTTATAATTGGAGAAAATTGATGTTTACCGCCTTACACTTGCCTCTTTCTAGTTTTTGTTTTGTTTCTACATTAAAGTGTACCTAAATTTCTGTTTCTAACTCAAGGGTGAATTAATTATAGTTGTAATAATTTTTTGAGGCTTTGTACCAAATAGAATTTATTTTATTCAAGATCTTTTTTCTTTCTTATTCTCTATTTTTTATTAATAATTTGATATTTAATTAAATTGACAAATTAATTTAATATCGATTGTTCTATATTGTCGTTGATGAATTTGTGATATGTAATTGTCATGAATGATTTAATTTAGCAACAATGAGCTAGTTTGCTTAGGTATGGGTAAGTATAACTTTTCCATTTTACATAACTTGCATAATAAACTCTAGAGGACAATATCTCGATTAATTGAATTTGGTTTTTAGTCATTCCCATATAGATTTATTTTTAATGCTATCATTAATTCGATATTGGACACTATGGTGTCCAATTGATTAAATGATAAGTGTTTATTTTGATGTTTGGTTAGAATCAAATAAATAGAGAATGTACACACTAATTATGGCTTTTCCACTTAAGTAGATTAAGTTCTTGAATTGAGAATTTGATTTTTTTTCTTTTTCTTTTCTTTTTTTTTAGTCTGTGATTAAGATTACAATGGGATAGAATTTGCGCCCTTGATTTCAAATTTGGTAATTTTATTTTTATATTCACTTCTTCATTGCTTAATTTTTATCTTAGTTCAACATTTCAAAACCTTATTTTATTTTAGTTTTCTTAAACCTTGAGAAATTAATTTGACTAGTTCTCTTGAGATACAACTTAGTTTCACATCTCTCTACAAGTTACATTAGAAGGATCAATTATTACTATGCAGCGCCTCGAAAACCAGACCAATATCCATTAGTCGTCAATTAACATCTTATTGGAATAAACCTTTGTATTCTTCCATATATATCTACTTAATATCTTTTAATATATTCCAAAATTCTTTCTATCACATTTGGAATCGAGAATCGAAATTTAACTTGGAAAAATCCAACATGAGAATTGTAACCGCCCAAAATTTCAACAAGTTAGAATGTATACTTAATTAAACTTTTATATTCTTTCATATCTAATATTTTATATTCTAAAATATTTGTGCTTAATCTTTTTGAGTCAACACCAAAGTCAAGAGTTTTAATTAACAAGTTAGAATGTATATTTAATTCTTTCTATCACATTTTAAATGGAGAATCTAAGAATGGGGGAGGGAGAAGAGGGGAAAGAGAGAGAAAAATAAATAAACGAATAAAATGTTTTTAATAAACAAAACAATTTTGAAAAAAAAAATTATTAAAAAAATTGTCACATCAGTTTTCTGTTAGTAATTAACAGAAAAGTTAACGAAGAGACTAGAGGTATAACAAAATCTAAACCTTAGGAGTAAAATTGTTGAATTTGAAACTTATGGAACCAAAATGTAACATATCCCTATCCTGACTAAAAGTGTATTTGTCCCTAAATTTTATTGAAACATTTGCGTGGATGACCCACTCGAGAGGCAGAATAAAAAATGTCCTAAATTTTTATTTATTAATTTTTTTTATTTGACAATGGACATGCCTTTGTTTAGTGAATATAATCTCATATAAAATACTTAATAAATATCTCAATTCACATTAAACCATCCACATATGTCATAGCCAAATTTTCAACAAGTTAGAATAATCTATACTTTTAAACTTTTATATTCTTCCATATCTAATATATTTTATATTCTAAAATATTTGTGCTTATTCTTATTCTTTTTGGGTCGATACCAAATTTAAGAGCTTTAATTAACACATTAGAATGTATACTTAATTTATTTTAATGTATTCCAAAATTCTTTCTATCACATTTGGAGTCGAGAATCTAAATTTGACTTAGAAAAATCCAACATGAAAACTGTAACGGTCCAAAATTTCAACAAGTTAGAATAATCTATACTTGATTAAACCTTTATATTCTCCCATATCTAATAATCTATACTTTAGCATATCTCCCTTTCATTTTAGTTTCACTAAATTACATGGTAAATTAATTAGTTGCCATGAAGAATATTTGAAAATGAAGACATTAGAAGAATGTTGTCGAGTAAACAGATTTTATTCGAAACTATCTTTTAATTAGCTATGAAACTCGTATTGGTTCACTCTTTTTTTTATGAAATCTGCATATTAAGATTCCAGGTATTAAGTTACTATTGAACGACTCTTAACTCCACAAATAATTCCGTTGGACGATATTCATTTCTAGGGATCAAACACAATTCTATAAATATCAAACTACCATTTTAGGTGAATAGCAAACCACCCGCTTACAAAGTTTTGTTTAGGTGGAATCTATCAATCAAAAGCGAGGATGAGTTCTTCTGGACTAGAGTATTGGAAAGTAATACAGAACATTAATGACAATCTGTATGTGCAAGAGATCGGAAAGTTTGCAGTGACGAAGAGAACACACGGTATAGTTGGGGCTACATGGACATTCATTCGAGTGGTGAGTGGTGAGATTCTAAAGGTGAATGAAGGAGAAAAGTACCGGCTTGAGGTGGAGGTGAAAATAGTGATAATGATACCATCTCTCCTAACTAAATATGAGACAGGTAAGGTTGTTGTGCTGGATCGTAAACCACCTGTCGAATCTTGGGAACTCTTAGATTTTGATTTTCCCAAATAG

mRNA sequence

ATGCGGTACATCCGGTTTAAAAGGTCCAACAGCGACGCTGTTGCCAACGTCTTGAAGCCAGAAACATGTGCAAGACAACGTAGCCTCATCAAAATTCGAAGCATTGATACGTTTAAATTTCTACACTCGTTGCTGCTTCTATCAACTGCTTGTGATCTGACGTCTGAAGAGCTTGCTGCGATGGCAAGTGGAGAAGAGAGACATGGGAGGTTGGCTGGCGATTGCTGCTTCGTTGAGAAACAAGATGATAAAACTGAAGAAGATGGTGGTGGTGGAATCTATCAATCAAAAGCGAGGATGAGTTCTTCTGGACTAGAGTATTGGAAAGTAATACAGAACATTAATGACAATCTGTATGTGCAAGAGATCGGAAAGTTTGCAGTGACGAAGAGAACACACGGTATAGTTGGGGCTACATGGACATTCATTCGAGTGGTGAGTGGTGAGATTCTAAAGGTGAATGAAGGAGAAAAGTACCGGCTTGAGGTGGAGGTGAAAATAGTGATAATGATACCATCTCTCCTAACTAAATATGAGACAGGTAAGGTTGTTGTGCTGGATCGTAAACCACCTGTCGAATCTTGGGAACTCTTAGATTTTGATTTTCCCAAATAG

Coding sequence (CDS)

ATGCGGTACATCCGGTTTAAAAGGTCCAACAGCGACGCTGTTGCCAACGTCTTGAAGCCAGAAACATGTGCAAGACAACGTAGCCTCATCAAAATTCGAAGCATTGATACGTTTAAATTTCTACACTCGTTGCTGCTTCTATCAACTGCTTGTGATCTGACGTCTGAAGAGCTTGCTGCGATGGCAAGTGGAGAAGAGAGACATGGGAGGTTGGCTGGCGATTGCTGCTTCGTTGAGAAACAAGATGATAAAACTGAAGAAGATGGTGGTGGTGGAATCTATCAATCAAAAGCGAGGATGAGTTCTTCTGGACTAGAGTATTGGAAAGTAATACAGAACATTAATGACAATCTGTATGTGCAAGAGATCGGAAAGTTTGCAGTGACGAAGAGAACACACGGTATAGTTGGGGCTACATGGACATTCATTCGAGTGGTGAGTGGTGAGATTCTAAAGGTGAATGAAGGAGAAAAGTACCGGCTTGAGGTGGAGGTGAAAATAGTGATAATGATACCATCTCTCCTAACTAAATATGAGACAGGTAAGGTTGTTGTGCTGGATCGTAAACCACCTGTCGAATCTTGGGAACTCTTAGATTTTGATTTTCCCAAATAG

Protein sequence

MRYIRFKRSNSDAVANVLKPETCARQRSLIKIRSIDTFKFLHSLLLLSTACDLTSEELAAMASGEERHGRLAGDCCFVEKQDDKTEEDGGGGIYQSKARMSSSGLEYWKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKIVIMIPSLLTKYETGKVVVLDRKPPVESWELLDFDFPK
Homology
[Close]
BLAST of Spg020063 vs. NCBI nr
Match: KAG6603238.1 (Cysteine proteinase inhibitor 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-15
Identity = 51/94 (54.26%), Postives = 62/94 (65.96%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           WK I++I D  YVQEIG+FA+TK  H   G TWTFIRVV+GE L V EG  YR+ +EVK 
Sbjct: 18  WKSIEDIKDP-YVQEIGRFAMTKFIHHQTGKTWTFIRVVNGETLAVEEGMLYRVVIEVKT 77

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDFD 202
            I++ S L   E     VLD K P +SWELL F+
Sbjct: 78  DIVVQSYLGSIELYVAKVLDHKQPRKSWELLAFE 110

[Close]
BLAST of Spg020063 vs. NCBI nr
Match: XP_022132557.1 (cysteine proteinase inhibitor 6-like [Momordica charantia])

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-11
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           W+ I+NIND  YVQE+G+FAV + TH + GA++ FIRVVSGE  +V  G+KY L +EVK 
Sbjct: 25  WEPIKNINDP-YVQELGRFAVMEHTHNLCGASYEFIRVVSGE-SQVVGGKKYCLVIEVKE 84

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDF 201
            I+IPS+ +  +  K ++LD K   +SW LL F
Sbjct: 85  TIIIPSMPSSIKFFKAIMLD-KAWEKSWALLSF 114

[Close]
BLAST of Spg020063 vs. NCBI nr
Match: KAG6590493.1 (hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-11
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           W++I+N  D+ YVQE+G+FAV +  HG+VGA W+F+ VVS E L V +G+ YRL ++V I
Sbjct: 23  WELIKN-KDDPYVQEMGRFAVMEHVHGLVGAKWSFVGVVSCESLVVPKGKLYRLLIKVDI 82

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDF 201
            I++P      E  + +VLD K    SWEL+ F
Sbjct: 83  EIVVPCHPHAIEVYEAIVLD-KECERSWELMSF 113

[Close]
BLAST of Spg020063 vs. NCBI nr
Match: KAG6604292.1 (putative cysteine proteinase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.9 bits (185), Expect = 4.6e-10
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           W+ + N++D  YVQE+G+FAV +  HG+ G   TFIRVVSGE   V EG+KY L VEVK 
Sbjct: 23  WEPV-NVHDQ-YVQELGRFAVMEHVHGLCGVGMTFIRVVSGESKMVCEGKKYSLVVEVKE 82

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDF 201
           V ++P L    +     VLD K   +SWELL F
Sbjct: 83  VPVLPHLCPAIKLYVADVLD-KQCAKSWELLAF 112

[Close]
BLAST of Spg020063 vs. NCBI nr
Match: XP_023543511.1 (cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 74.7 bits (182), Expect = 1.0e-09
Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           W+ + N++D  YVQE+G+FAV +  HG+ G   TF+RVVSGE   V EG+KY L VEVK 
Sbjct: 23  WEPV-NVHDP-YVQELGRFAVMEHVHGLCGVGMTFVRVVSGESKMVCEGKKYSLVVEVKE 82

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDF 201
           V+++P      +     VLD K   +SWELL F
Sbjct: 83  VLVLPHQCPAIKLYVAEVLD-KQCAKSWELLAF 112

[Close]
BLAST of Spg020063 vs. ExPASy TrEMBL
Match: A0A6J1BU61 (cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005388 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 5.3e-12
Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           W+ I+NIND  YVQE+G+FAV + TH + GA++ FIRVVSGE  +V  G+KY L +EVK 
Sbjct: 25  WEPIKNINDP-YVQELGRFAVMEHTHNLCGASYEFIRVVSGE-SQVVGGKKYCLVIEVKE 84

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDF 201
            I+IPS+ +  +  K ++LD K   +SW LL F
Sbjct: 85  TIIIPSMPSSIKFFKAIMLD-KAWEKSWALLSF 114

[Close]
BLAST of Spg020063 vs. ExPASy TrEMBL
Match: A0A6J1GCT2 (uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC111453027 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 7.2e-09
Identity = 44/93 (47.31%), Postives = 57/93 (61.29%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHGIVGATWTFIRVVSGEILKVNEGEKYRLEVEVKI 167
           W+ + N++D  YVQE+G+FAV +  HG+ G   TFI VVSGE   V EG+KY L VEVK 
Sbjct: 23  WEPV-NVHDQ-YVQELGRFAVMEHVHGLCGVGMTFICVVSGESKMVCEGKKYSLVVEVKE 82

Query: 168 VIMIPSLLTKYETGKVVVLDRKPPVESWELLDF 201
           V ++P      +     VLD K   +SWELL F
Sbjct: 83  VPVLPHACPAIKLYVADVLD-KQCAKSWELLAF 112

[Close]
BLAST of Spg020063 vs. ExPASy TrEMBL
Match: A0A5A7UB42 (Cysteine proteinase inhibitor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold48614G00010 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.3e-06
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 0 

Query: 108 WKVIQNINDNLYVQEIGKFAVTKRTHG-IVGATWTFIRVVSGEILKVNEGEKYRLEVEVK 167
           WK I++  D  Y++++G+F+V K T    +    TFIRVVS E L VNEG  YR+ VE++
Sbjct: 23  WKAIEDTKDP-YIEDMGRFSVAKFTRNQDIEEMATFIRVVSSEYLVVNEGTMYRIVVEIR 82

Query: 168 IVIMIPSLLTKYETGKVVVLDRKPPVESWELLDFD 202
                 ++    E     VLD K P  SW LL F+
Sbjct: 83  ----KENVSQSRELYVAKVLDHKHPFNSWTLLSFE 112

The following BLAST results are available for this feature:
BLAST of Spg020063 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603238.11.2e-1554.26Cysteine proteinase inhibitor 6, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022132557.11.1e-1150.54cysteine proteinase inhibitor 6-like [Momordica charantia][more]
KAG6590493.13.2e-1146.24hypothetical protein SDJN03_15916, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6604292.14.6e-1049.46putative cysteine proteinase inhibitor 7, partial [Cucurbita argyrosperma subsp.... [more]
XP_023543511.11.0e-0947.31cysteine proteinase inhibitor 5-like [Cucurbita pepo subsp. pepo][more]
BLAST of Spg020063 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg020063 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BU615.3e-1250.54cysteine proteinase inhibitor 6-like OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1GCT27.2e-0947.31uncharacterized protein LOC111453027 OS=Cucurbita moschata OX=3662 GN=LOC1114530... [more]
A0A5A7UB423.3e-0640.00Cysteine proteinase inhibitor 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of Spg020063 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.450.10coord: 102..202
e-value: 1.3E-6
score: 30.5
NoneNo IPR availableSUPERFAMILY54403Cystatin/monellincoord: 112..168

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020063.1Spg020063.1mRNA