Spg020021 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCAGAGACTTTGCAATATGGAGAGATGAGTACAGGATCCTAAGGCGTCATTATGACGTAAGAGGGCAGATTCAACGAGGAACTGAAAAGTTGAGATTGATGGCAAGGATGGCAGATCGATTTGCCGAACGAGCCATGACTCTCCGACAACGTATCACACCCACACAGTCTGGTGGTGAAGTAGATTCCTAGGGGTGATAGGGCGAGATCTCGGGCGCTTCGGGTGCTACCATTAGAGTCTTTAGTTTGTCGTTTTTTTATTTGAGCATTTGCATCAGTTTGTTGTAATATTTGACATTATTAATAAAGTGGATGTTTGTTGCTATTACATCTTTGCATTCATGCACCTCACATTAATATTAAAGAGATAATAATAAAGGACGTATGACTAATCAAATCTTTTTATTTCCTTCTTTTACAAATAAAAGGTTCAAGTTTGCAAAATAGCTTGAAGTACACCTCCCCATCACTCGTACTGGACAAGAAGAAAAGCGAAATTCATGGATGATCAAGTCAATGATCAGGTACAGGCAGTCCAACGAGATGTAGAAGAACTGAAAGAGCAGATGGCAAAGATTTTGGAAATTCTCACTGCAAGAAAAGAAAAGTCTGTGGCATAAACATCATCACAGGCTGAAATAAGTCAGAACCAAGCGATAAACCACACCCCTCCTTACCCTCCAGGGTTTACGCCGCAAATGTTATCGGGTTCGCATTTGGGAGGAATGGCGTATCCTGCGTTATTCCCCGTACAAGATCCTAATCGAGTTTCATAGCAGGCAAACCTTGTGAATGACCCGGTATCCACTTTAGGCATGGAGACCCTCAAGAAGACATCTGACGTTGGTGGTAAAGGAAGATTGGAATTCCTGGAAGAGAGGTTGCGTGCGATAGAGGGTGCTGATGTTTATGGAGATATTGATGCAACACAATTGTGTTTGATCTCGGATGTTATTATTCCTCCCAAATTCAAGATACCAGATTTTGAAAAATACAATGGGACTACATGTCCAAAGAGTCATATTGTCATGTATTGTCGAAAGATGTCAGCCCATGCCCACAATGATAAACTGTTGATTCACTGTTTTCAAGACAGTCTGACAAGTCCGACATCCCGTTAGTATATGCACTTGGATAGCTCTCAGGTGTACAAGTGGAAAGATCTAGCAGATTCGTTTCTAAAACAATATAAGTACAACATTGACATGGCTCCGGATCGTTTAGATCTCCAGCGCATGGAAAAGAAGAATGCTGAAACCTTCAAAGAGTACGCTCCGCGATGGAGAGAAATGGCCGCACAGGTGCAACCTCCTTTGTCAGACCGAGAAATGACAACTACGTTCATAAACACTTTGCGAGCACCATATTATGACCGAATGATTGGAAGTGCTTAAACCAATTTTTCTGATATCATAACGATTGGGGAAAGAATAGAGTATGGAGTCAAGAATGGAAGGATCACTGATACAATATCTGAGGCAAATGCGAGAAAAATGATGACGCTAAAGAAGAAAAAAGGAGAGGTTCATGAGGTCAGCTTAGGGAAAAGAGTTGCGACCCATATGTCGTCACCAATTCTTGGGCAGACCAGTTACTCCCCTAATCCTCAACATGGAGGACAAAGTTCATCAAGTCAGTCAAATCAGCGAGGTGGCAAGGGTAATTGGAAGCAAACACGTTTTGACCCTATCCCCATGACATACACTGAGCTTTTGCCTCAATTGTTGAAGAACTAGCAGGTTGCCCTTGTGCCTCAAGAGCCACTACAACCACCATATCCAAAATGGTATGATCCTAATGCACGATGCAAGTATCATGAAGGGGCAATTGGTCACTCTACAGAAAATTGTTATCCGTTGAAGGCTAAAGTACAGAGTCTAGTCAAAGCTGGATGATTGAAATTCAAAAAGACCAGGGAAGAGCCTAATGTTAATCAGAATCCTCTCCCAACTCATGAAAATCCTACTATGAATGCGATTGAAGTACCTGCAGAACGCTACAAGGATAATGTTTATGATTTGAGTACCCCTATGAGGACTTTATTTCAAGTTCTCTATAATGTTGGATATCTCTCAATAGGAATTGAGCAGAGCTACATAGATGAATCGGAATTTGATGATGAGAAAAGATGTGTGTTCCATGCAGGAATGGGCAGACATTCCTTAGAAGAATGTGATGATTTTAAGCAACAAGTGCAAAGATTGATGGATTCCAAGCTATTGATCGTAAGTCAAAAAGATATGGATGAGAAGGATGTTGGTGTAATTTCTCAAACGTCATCTTCTGAAGAGATGCCAGGAGGGACATTGTCTCACCCAAAGCCATTAATCGTCCATTATGAGGAGAAATCGAATATCACTTCTCACACTCAA ATGTCCAGAGACTTTGCAATATGGAGAGATGAGTACAGGATCCTAAGGCGTCATTATGACGTAAGAGGGCAGATTCAACGAGGAACTGAAAAGTTGAGATTGATGGCAAGGATGGCAGATCGATTTGCCGAACGAGCCATGACTCTCCGACAACAGTATGGAGTCAAGAATGGAAGGATCACTGATACAATATCTGAGGCAAATGCGAGAAAAATGATGACGCTAAAGAAGAAAAAAGGAGAGGTTCATGAGGTTGCCCTTGTGCCTCAAGAGCCACTACAACCACCATATCCAAAATGGTATGATCCTAATGCACGATGCAAGGAAGAGCCTAATGTTAATCAGAATCCTCTCCCAACTCATGAAAATCCTACTATGAATGCGATTGAAGTACCTGCAGAACGCTACAAGGATAATGTTTATGATTTGAGTACCCCTATGAGGACTTTATTTCAAGTTCTCTATAATGTTGGATATCTCTCAATAGGAATTGAGCAGAGCTACATAGATGAATCGGAATTTGATGATGAGAAAAGATGTGTGTTCCATGCAGGAATGGGCAGACATTCCTTAGAAGAATGTGATGATTTTAAGCAACAAGTGCAAAGATTGATGGATTCCAAGCTATTGATCGTAAGTCAAAAAGATATGGATGAGAAGGATGTTGGTGTAATTTCTCAAACGTCATCTTCTGAAGAGATGCCAGGAGGGACATTGTCTCACCCAAAGCCATTAATCGTCCATTATGAGGAGAAATCGAATATCACTTCTCACACTCAA ATGTCCAGAGACTTTGCAATATGGAGAGATGAGTACAGGATCCTAAGGCGTCATTATGACGTAAGAGGGCAGATTCAACGAGGAACTGAAAAGTTGAGATTGATGGCAAGGATGGCAGATCGATTTGCCGAACGAGCCATGACTCTCCGACAACAGTATGGAGTCAAGAATGGAAGGATCACTGATACAATATCTGAGGCAAATGCGAGAAAAATGATGACGCTAAAGAAGAAAAAAGGAGAGGTTCATGAGGTTGCCCTTGTGCCTCAAGAGCCACTACAACCACCATATCCAAAATGGTATGATCCTAATGCACGATGCAAGGAAGAGCCTAATGTTAATCAGAATCCTCTCCCAACTCATGAAAATCCTACTATGAATGCGATTGAAGTACCTGCAGAACGCTACAAGGATAATGTTTATGATTTGAGTACCCCTATGAGGACTTTATTTCAAGTTCTCTATAATGTTGGATATCTCTCAATAGGAATTGAGCAGAGCTACATAGATGAATCGGAATTTGATGATGAGAAAAGATGTGTGTTCCATGCAGGAATGGGCAGACATTCCTTAGAAGAATGTGATGATTTTAAGCAACAAGTGCAAAGATTGATGGATTCCAAGCTATTGATCGTAAGTCAAAAAGATATGGATGAGAAGGATGTTGGTGTAATTTCTCAAACGTCATCTTCTGAAGAGATGCCAGGAGGGACATTGTCTCACCCAAAGCCATTAATCGTCCATTATGAGGAGAAATCGAATATCACTTCTCACACTCAA MSRDFAIWRDEYRILRRHYDVRGQIQRGTEKLRLMARMADRFAERAMTLRQQYGVKNGRITDTISEANARKMMTLKKKKGEVHEVALVPQEPLQPPYPKWYDPNARCKEEPNVNQNPLPTHENPTMNAIEVPAERYKDNVYDLSTPMRTLFQVLYNVGYLSIGIEQSYIDESEFDDEKRCVFHAGMGRHSLEECDDFKQQVQRLMDSKLLIVSQKDMDEKDVGVISQTSSSEEMPGGTLSHPKPLIVHYEEKSNITSHTQ Homology
BLAST of Spg020021 vs. NCBI nr
Match: KAA0065293.1 (uncharacterized protein E6C27_scaffold1023G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 179.9 bits (455), Expect = 2.9e-41 Identity = 110/315 (34.92%), Postives = 154/315 (48.89%), Query Frame = 0
BLAST of Spg020021 vs. NCBI nr
Match: KAA0046608.1 (uncharacterized protein E6C27_scaffold114G001540 [Cucumis melo var. makuwa]) HSP 1 Score: 178.7 bits (452), Expect = 6.4e-41 Identity = 110/315 (34.92%), Postives = 155/315 (49.21%), Query Frame = 0
BLAST of Spg020021 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]) HSP 1 Score: 176.8 bits (447), Expect = 2.4e-40 Identity = 108/315 (34.29%), Postives = 154/315 (48.89%), Query Frame = 0
BLAST of Spg020021 vs. NCBI nr
Match: KAA0061241.1 (uncharacterized protein E6C27_scaffold455G00760 [Cucumis melo var. makuwa]) HSP 1 Score: 176.0 bits (445), Expect = 4.2e-40 Identity = 108/315 (34.29%), Postives = 153/315 (48.57%), Query Frame = 0
BLAST of Spg020021 vs. NCBI nr
Match: TYK05801.1 (Gag-pro-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 173.3 bits (438), Expect = 2.7e-39 Identity = 87/213 (40.85%), Postives = 132/213 (61.97%), Query Frame = 0
BLAST of Spg020021 vs. ExPASy TrEMBL
Match: A0A5A7VAU5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00060 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 110/315 (34.92%), Postives = 154/315 (48.89%), Query Frame = 0
BLAST of Spg020021 vs. ExPASy TrEMBL
Match: A0A5A7TUT4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001540 PE=4 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41 Identity = 110/315 (34.92%), Postives = 155/315 (49.21%), Query Frame = 0
BLAST of Spg020021 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 1.2e-40 Identity = 108/315 (34.29%), Postives = 154/315 (48.89%), Query Frame = 0
BLAST of Spg020021 vs. ExPASy TrEMBL
Match: A0A5A7V681 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold455G00760 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40 Identity = 108/315 (34.29%), Postives = 153/315 (48.57%), Query Frame = 0
BLAST of Spg020021 vs. ExPASy TrEMBL
Match: A0A5D3C1I2 (Gag-pro-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G003070 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 1.3e-39 Identity = 87/213 (40.85%), Postives = 132/213 (61.97%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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