Spg020010 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg020010
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold5: 29805102 .. 29807149 (-)
RNA-Seq ExpressionSpg020010
SyntenySpg020010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCCCGAGGCTCGGGGTGGCATCGTGAAGCATCAGTGGAACCCGATAGTTCCCGGTTGGCACGGTATTTGCCCGAAACGTCCCGGTAAGCATTATAATGGCTCGATAAGCCCCGGTAGGCGTCGAAAAGACCCGGTAAGCGTTATAATGCCCCGGTAGGTCTCGGTAAGTGCTGAAATCACCCGGTAAGCTCCGGTTGAGCGTTTTAAGGCCGTTTTGACCCCGAGAAGGGTCCGAACACATCCTGGCGAAGTTCCAGATTGATGTAGAAGCGTGTGGGCAGTGTCCTCGAGATAGAGGACGATGAAATGTGATGCGACGTTGCGTTCAGATGACCTTGGCCTGATGTAGAGGCAAGGTTGAGCTTTAGGACTTGGCCTAGAGTAGAGGCAAGTCGGCTAGAGTCGCGAATGAGTGAAAATACACGGACGGGCGACGTGTATGACCGAATGTTATTCCGCTGCAAGATGATTTGAGTTCGGTTGAGGATGAAGAACCTCGCCTAAGGTCCGATGAAGCACCAAAGTCCCGCGAAAAAGTTGTATGGGTTAGAGATGACCCTTAAGGCTGGCCATGGTCGCGTGTAAGATCATGGCGCCGCACGGTTAAAAAGGTACGACTGTGACAGTTGGTATCAGAGCCTAGTTTAGGCTTTGGGCTACGATTAGAGCCCCACTTTTTGTGCGTAGTCGGACGAGACAGAGAAACCCGATGGTCAGATTGAAGACTCCACGATTGTGTCAAGAGTGCCAATTTCGGCAGGACAGTTGTGCAGTCAGTATCAGAGACAGGAAAGGGTAATGAAGCCGGACTCTGTGTGTGAGTCCAACCCGTCAGAAAGCAAGAACCAAGTCCATTTGCCAAGGGCTTGGGTATCAGTGTGAGCAAGGGAAGAAATCAGAAGGTGTACCAGGTAGGGTGCCTTCGAGAGAGCCATTACCACCAGAGGGATAGTGTTAATAACCGCAAGTAGAGAAAGCCGGGGGTCAGTGTGACATGCGCCGGTCAAGTACCAGAGTTGAGCATCAAGAAAGCCTATATGGGTGGGCGATTTGGGCTGTGTAGAGCCAAGTTGATTGGGAGAGAGCCCGAGAGAATGGGTTGCTCGTCCCGTGAGAACGCTCGTGTGTCGAGCGAGTGTGTCCCTTAAGTCATTCCACATGCCTAAGTGGGTGGCTTCACAGTTGTCAAGACCAGCAATTTGCTCGAGATGGAGCACCAGGCTGGAGACAGAGCAGAGAAAGAGAAGAAGCTGCTGCAAGTTCCGACAGAAGCATCGGTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGTCGAAGGGGAGTGCCAACAGAGAGAATGGGTTGTGTCAAGCTTTCAGATGTCCGCACCAGAAGGGATGGTGTCACGAAGAGAGAATTTCGTGGTAGGCTTGCGAGCCTCACCCCGCGGGGTGCACCTTGTTATGTGCCGCTCAGAGAATATGTGTGTAAAGTGGCCAGGAGTGCCAAAGAGAAATCAGGGCGCGCTCCCCGTAAGCGGAGGCGAAGAGAATGCCGAAGCTTAGCCGTGTTCTGTTAGAAGATCCTCGGGCCGAGTCCTAAAGTTGGGCGCGAGTTAGGTCCACAGAGAAGGGGGTAGTCTGCAGGCAGTGTGCTTTTTGCCGTGTCTACGTTGCGAGTCTCGGGGCCAAGTCCTAAAGTTGGGCGCGAGTTAGGTCCGTGGGTGGGATAGCCCGTAGATAGTGTGCAGTTGTTTTGCCTTGCCTATGTTGCGAGTCTCGGGGCCGAGTCCTAAAGTTGGCCGTGAGTTAGGTCCGTTGGTGGGATAGCTCATAGGTAGTGCGCAGTTTCCGTATTCGTTCTGATGCACAATATTTCAGCAGGTCCGTCAGCAGCCAGTCGAAGTCGGATCGTCGTCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAGTGATGTGGATTGTGCCCCTAAGTATGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGAAGAGAATAG

mRNA sequence

ATGACATCCCGAGGCTCGGGGTGGCATCGTGAAGCATCAGTGGAACCCGATAGTTCCCGGTTGGCACGGTATTTGCCCGAAACGTCCCGGACTTGGCCTAGAGTAGAGGCAAGTCGGCTAGAGTCGCGAATGAGTGAAAATACACGGACGGGCGACTCGGACGAGACAGAGAAACCCGATGGTCAGATTGAAGACTCCACGATTGTGTCAAGAGTGCCAATTTCGGCAGGACAGTTGTGCAGTCAGTATCAGAGACAGGAAAGGGTAATGAAGCCGGACTCTGTGTTTGTCAAGACCAGCAATTTGCTCGAGATGGAGCACCAGGCTGGAGACAGAGCAGAGAAAGAGAAGAAGCTGCTGCAAGTTCCGACAGAAGCATCGGTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGTCGAAGGGGAGTGCCAACAGAGAGAATGGGTTGTGTCAAGCTTTCAGATGTCCGCACCAGAAGGGATGGTGTCACGAAGAGAGAATTTCGTGGTAGGCTTGCGAGCCTCACCCCGCGGGGTGCACCTTGTTATGTGCCGCTCAGAGAATATGTGTGTAAAGTGGCCAGGAGTGCCAAAGAGAAATCAGGGCGCGCTCCCCGTCCGTCAGCAGCCAGTCGAAGTCGGATCGTCGTCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAGTGATGTGGATTGTGCCCCTAAGTATGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGAAGAGAATAG

Coding sequence (CDS)

ATGACATCCCGAGGCTCGGGGTGGCATCGTGAAGCATCAGTGGAACCCGATAGTTCCCGGTTGGCACGGTATTTGCCCGAAACGTCCCGGACTTGGCCTAGAGTAGAGGCAAGTCGGCTAGAGTCGCGAATGAGTGAAAATACACGGACGGGCGACTCGGACGAGACAGAGAAACCCGATGGTCAGATTGAAGACTCCACGATTGTGTCAAGAGTGCCAATTTCGGCAGGACAGTTGTGCAGTCAGTATCAGAGACAGGAAAGGGTAATGAAGCCGGACTCTGTGTTTGTCAAGACCAGCAATTTGCTCGAGATGGAGCACCAGGCTGGAGACAGAGCAGAGAAAGAGAAGAAGCTGCTGCAAGTTCCGACAGAAGCATCGGTGCAGCGATTGCCACATGAAGGTGGCCAGTTGTTAGTTGGTCGAAGGGGAGTGCCAACAGAGAGAATGGGTTGTGTCAAGCTTTCAGATGTCCGCACCAGAAGGGATGGTGTCACGAAGAGAGAATTTCGTGGTAGGCTTGCGAGCCTCACCCCGCGGGGTGCACCTTGTTATGTGCCGCTCAGAGAATATGTGTGTAAAGTGGCCAGGAGTGCCAAAGAGAAATCAGGGCGCGCTCCCCGTCCGTCAGCAGCCAGTCGAAGTCGGATCGTCGTCGGGACGATGCCGAGATTAAGTGGGGGAGAATGTCACAATCCATCGTGCAGTGATGTGGATTGTGCCCCTAAGTATGTCATCGAGGACGATGACAGTTTAAGTGGGGGAGAATGTCACAACCATACTAGAAGAGAATAG

Protein sequence

MTSRGSGWHREASVEPDSSRLARYLPETSRTWPRVEASRLESRMSENTRTGDSDETEKPDGQIEDSTIVSRVPISAGQLCSQYQRQERVMKPDSVFVKTSNLLEMEHQAGDRAEKEKKLLQVPTEASVQRLPHEGGQLLVGRRGVPTERMGCVKLSDVRTRRDGVTKREFRGRLASLTPRGAPCYVPLREYVCKVARSAKEKSGRAPRPSAASRSRIVVGTMPRLSGGECHNPSCSDVDCAPKYVIEDDDSLSGGECHNHTRRE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg020010.1Spg020010.1mRNA