Spg019891 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg019891
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold5: 35145823 .. 35146606 (+)
RNA-Seq Expression	Spg019891
Synteny	Spg019891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGACTGGAGTCCTAGTGCTATTAACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGCAGCTGAACGATGCTGTGCGGGAAGTTGGTATTGAAGGGGCGCAGTGGAGGCTTTCAAAAACAGAGAAAAGGACGTTTCAGTCAACCTATCTGAAGAGGGAAGCAAATACATGGATGGGATTTATCAAACAAAGGTTGCATTCCAACGACTCATGACTCGACAGTTTCTAGGGAATGGGTTCTTTTGGCGTTCGCGATTTTGAGGTCTCTCAGCATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAAAAGAAAGTGGGGAAGCTGTTCTTCCCGAATACAATCACAATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGTCATATTATTTGACAAGGGAATTATTGATACGCCTAACTTGGCACGGCTTTAGCATACGCAAGAGGCACGCCAGGGTGGACTTATCTATGGCATCAACACGATTTTAGAACAACTAGCACTGTCGGCCAGCAGGCAGGAGTTTGCCGAAAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAAAATTTTTCCAAACCATATCCAGCCCTTCCAGCATTCCCTGAGGATTTGTTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGAAGAAGAGGATGATGAAAATGAGCAGGGTCAAGTGGACTGA

mRNA sequence

GTTGACTGGAGTCCTAGTGCTATTAACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGCAGCTGAACGATGCTGTGCGGGAAGTTGTTTCTAGGGAATGGGTTCTTTTGGCGTTCGCGATTTTGAGGTCTCTCAGCATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAAAAGAAAGTGGGGAAGCTGTTCTTCCCGAATACAATCACAATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGGTGGACTTATCTATGGCATCAACACGATTTTAGAACAACTAGCACTGTCGGCCAGCAGGCAGGAGTTTGCCGAAAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAAAATTTTTCCAAACCATATCCAGCCCTTCCAGCATTCCCTGAGGATTTGTTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGAAGAAGAGGATGATGAAAATGAGCAGGGTCAAGTGGACTGA

Coding sequence (CDS)

GTTGACTGGAGTCCTAGTGCTATTAACGCCCTGTACAACCTTCAAGATTTCCCCCACGCAGGATACAATGAGATGGCTGTAGCACCATCTAATGAGCAGCTGAACGATGCTGTGCGGGAAGTTGTTTCTAGGGAATGGGTTCTTTTGGCGTTCGCGATTTTGAGGTCTCTCAGCATTGATGTAGGGAAGATTATTGCTAGTGAAATATCTGGATGTTGGAAAAAGAAAGTGGGGAAGCTGTTCTTCCCGAATACAATCACAATGCTTTGCAAGCGAGCAGGGGTTCCAGAGAATGAAGGAGATGGTGGACTTATCTATGGCATCAACACGATTTTAGAACAACTAGCACTGTCGGCCAGCAGGCAGGAGTTTGCCGAAAGGCAAGCTTTAACCTTCTGGAACTATGTTAAAAGTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAAAATTTTTCCAAACCATATCCAGCCCTTCCAGCATTCCCTGAGGATTTGTTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGAAGAAGAGGATGATGAAAATGAGCAGGGTCAAGTGGACTGA

Protein sequence

VDWSPSAINALYNLQDFPHAGYNEMAVAPSNEQLNDAVREVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDGGLIYGINTILEQLALSASRQEFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPMEREEEDDENEQGQVD

Homology

[Close]

BLAST of Spg019891 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-14
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 40  EVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENE 99
           ++VS++ +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A    NE
Sbjct: 122 KIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNE 181

Query: 100 ---GDGGLIYGI-------------------------------NTILEQLAL---SASRQ 159
               + G I  I                                 +L+QL       S+Q
Sbjct: 182 EKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQ 241

Query: 160 EFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL 167
           E   +Q   FW Y K RD  LKKALQ NF++P P  PAFP+++L
Sbjct: 242 EHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL 285

[Close]

BLAST of Spg019891 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-12
Identity = 51/177 (28.81%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 40  EVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVP--- 99
           + VS++ +LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   
Sbjct: 63  KTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNARAPFLV 122

Query: 100 ----------------------------------------ENEGDGGLIYGINTILEQLA 159
                                                    +  +G ++  +  + ++L+
Sbjct: 123 NEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKALEQRLS 182

Query: 160 LSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL 167
               +Q       +   +Q   FW Y K RD  LKKALQ NF++P P  P FP++LL
Sbjct: 183 QQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELL 239

[Close]

BLAST of Spg019891 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-12
Identity = 52/177 (29.38%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 40  EVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVP--- 99
           + VS++ +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   
Sbjct: 192 KTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLV 251

Query: 100 ----------------------------------------ENEGDGGLIYGINTILEQLA 159
                                                    N  +G ++  +  + ++L+
Sbjct: 252 NEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLS 311

Query: 160 LSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL 167
               +Q       +   +Q   FW Y K RD  LKKALQ NF++P P  PAFP+++L
Sbjct: 312 QQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEIL 368

[Close]

BLAST of Spg019891 vs. NCBI nr
Match: TYG52543.1 (hypothetical protein ES288_D09G036700v1 [Gossypium darwinii])

HSP 1 Score: 60.8 bits (146), Expect = 1.4e-05
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 42  VSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGV 96
           +S EW+LL +AIL   SI+VGKII  EI  C KKK    +FP+ IT LC +A V
Sbjct: 161 ISMEWMLLLYAILTEKSINVGKIILKEIQNCAKKKARSAYFPSLITSLCLKAHV 214

[Close]

BLAST of Spg019891 vs. NCBI nr
Match: PON42277.1 (hypothetical protein PanWU01x14_283290 [Parasponia andersonii])

HSP 1 Score: 58.9 bits (141), Expect = 5.4e-05
Identity = 54/182 (29.67%), Postives = 73/182 (40.11%), Query Frame = 0


Query: 53  ILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVP-----ENEGDGGLIYG 112
           +L   SI+VG+II  EI     +  G LFFP+ IT +C  A  P     E   + G I  
Sbjct: 1   MLTGKSINVGQIIHREICAYAVRNSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDA 60

Query: 113 INTI----------------------------------LEQLALSASRQEFAERQALT-- 172
           I                                     L+ L    S+QE  + Q +T  
Sbjct: 61  IAVARIAQEGPAEPSHRPSSSRPSAASNSSTPSETLQQLKSLEQRISQQEVQQYQMMTLL 120

Query: 173 ---------FWNYVKSRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPMEREEEDD 185
                    FW Y K RD   KK+LQ+NF+KP P+ PAF E++L   +    M   +ED 
Sbjct: 121 QQIHQQQQQFWAYAKERDNASKKSLQKNFTKPIPSFPAFLEEILQD-LDDEHMAESDEDG 180

[Close]

BLAST of Spg019891 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-14
Identity = 58/164 (35.37%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 40  EVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENE 99
           ++VS++ +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A    NE
Sbjct: 122 KIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNE 181

Query: 100 ---GDGGLIYGI-------------------------------NTILEQLAL---SASRQ 159
               + G I  I                                 +L+QL       S+Q
Sbjct: 182 EKLHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQ 241

Query: 160 EFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL 167
           E   +Q   FW Y K RD  LKKALQ NF++P P  PAFP+++L
Sbjct: 242 EHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEIL 285

[Close]

BLAST of Spg019891 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.6e-13
Identity = 51/177 (28.81%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 40  EVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVP--- 99
           + VS++ +LL +++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   
Sbjct: 63  KTVSKDRMLLLYSMLTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNARAPFLV 122

Query: 100 ----------------------------------------ENEGDGGLIYGINTILEQLA 159
                                                    +  +G ++  +  + ++L+
Sbjct: 123 NEEKLHITGEIDAIAVARITQEGQTELTQQPSTSRPTVASSSRANGDILQQLKALEQRLS 182

Query: 160 LSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL 167
               +Q       +   +Q   FW Y K RD  LKKALQ NF++P P  P FP++LL
Sbjct: 183 QQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELL 239

[Close]

BLAST of Spg019891 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.6e-13
Identity = 52/177 (29.38%), Postives = 80/177 (45.20%), Query Frame = 0


Query: 40  EVVSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVP--- 99
           + VS++ +LL  ++L   SI+VG++I SEI  C  +K G LFFP+ IT LC+ A  P   
Sbjct: 192 KTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLV 251

Query: 100 ----------------------------------------ENEGDGGLIYGINTILEQLA 159
                                                    N  +G ++  +  + ++L+
Sbjct: 252 NEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLS 311

Query: 160 LSASRQ-------EFAERQALTFWNYVKSRDANLKKALQENFSKPYPALPAFPEDLL 167
               +Q       +   +Q   FW Y K RD  LKKALQ NF++P P  PAFP+++L
Sbjct: 312 QQEVQQYHMMSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEIL 368

[Close]

BLAST of Spg019891 vs. ExPASy TrEMBL
Match: A0A5D2B8V0 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 6.9e-06
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 42  VSREWVLLAFAILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGV 96
           +S EW+LL +AIL   SI+VGKII  EI  C KKK    +FP+ IT LC +A V
Sbjct: 161 ISMEWMLLLYAILTEKSINVGKIILKEIQNCAKKKARSAYFPSLITSLCLKAHV 214

[Close]

BLAST of Spg019891 vs. ExPASy TrEMBL
Match: A0A2P5B0E3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283290 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-05
Identity = 54/182 (29.67%), Postives = 73/182 (40.11%), Query Frame = 0


Query: 53  ILRSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVP-----ENEGDGGLIYG 112
           +L   SI+VG+II  EI     +  G LFFP+ IT +C  A  P     E   + G I  
Sbjct: 1   MLTGKSINVGQIIHREICAYAVRNSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDA 60

Query: 113 INTI----------------------------------LEQLALSASRQEFAERQALT-- 172
           I                                     L+ L    S+QE  + Q +T  
Sbjct: 61  IAVARIAQEGPAEPSHRPSSSRPSAASNSSTPSETLQQLKSLEQRISQQEVQQYQMMTLL 120

Query: 173 ---------FWNYVKSRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPMEREEEDD 185
                    FW Y K RD   KK+LQ+NF+KP P+ PAF E++L   +    M   +ED 
Sbjct: 121 QQIHQQQQQFWAYAKERDNASKKSLQKNFTKPIPSFPAFLEEILQD-LDDEHMAESDEDG 180

The following BLAST results are available for this feature:

BLAST of Spg019891 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	2.9e-14	35.37	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON59596.1	1.6e-12	28.81	hypothetical protein PanWU01x14_158080 [Parasponia andersonii]	[more]
PON46472.1	1.6e-12	29.38	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
TYG52543.1	1.4e-05	53.70	hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]	[more]
PON42277.1	5.4e-05	29.67	hypothetical protein PanWU01x14_283290 [Parasponia andersonii]	[more]

BLAST of Spg019891 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg019891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	1.4e-14	35.37	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5CEY2	7.6e-13	28.81	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE...	[more]
A0A2P5BCG4	7.6e-13	29.38	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A5D2B8V0	6.9e-06	53.70	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D09G036700v1 PE=...	[more]
A0A2P5B0E3	2.6e-05	29.67	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_283290 PE...	[more]

BLAST of Spg019891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg019891.1	Spg019891.1	mRNA