Spg019887 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCCCACAAGTCGTTCTCGGCCAGGAGAATAGTAGGGAAGACTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCATTTGTGAGCTACAAAGGTTGGTGTTCTCTAAACTCTCTTTTCTGTCTTTTATAGAACATGCATGCTTTAGGAGCAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAGCTGCCACGTGTCGCGCAGGGATAATCCAACGGTTTAGCCGTTGACAGCATGCAGTTATTTACCATGGGCGATTGAAATTCAAGTTTTTACCGTTAGTGGATTTGATTTGCAAATTAAATGTGAACGGTAAATCCATTTAATACAGGGCAAAATCTTTCGGTTACGATTTGATTTGCTGCAGCCCTATTTATTCCTAAGCCTTCGGTAAGTTCTTCTTCAATTTCTTGTCGTCCCTTGCTATTTGCATTCTTCTTTCTTTCTCTGTGTGCGACAGAAATTACTTTGAGTCTTCCATGACCAAAACGAGAGCAAGAAAAGAGAGAGATAATAAAGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAGTAAAGGCAAAGAAGAAGAAGACACCAGTAGAAAAAGAAGCTAAAAGAAGAAGAAAACAACAGAGGACTGAAGATCAAGAAGTTGTTTAGAAAGCGGCGGAGGATGTTATTGCGGAAGAAAATCCGAAAGAACCAGAAGGACGGAATCAAGAGCAATCTGAGCCAGGAGTTGCGGATACAGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGGCAGAGGATGTACAAGAAAAACAGGCAGAGGTTGCACCTGAAAAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAAGTGCCCAAACGCCGCCATATAAAGCGAAAAGCGGGCCGTGTTAAGGTAGTCCAAGCTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAGGACGTTCCAGTCAGCCTATTTAAAGAGGGAAGCAAATGCTTGGATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAAAGAATGAAAGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCATGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAACTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATTTTCAGCCCTTCCAACATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCACCGCCTGTCGAGAGAGAAGGAAATAGAGAAGAAGATCCGGGTCAGGAGGATTGA CTCCCACAAGTCGTTCTCGGCCAGGAGAATAGTAGGGAAGACTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCATTTGTGAGCTACAAAGAAATTACTTTGAGTCTTCCATGACCAAAACGAGAGCAAGAAAAGAGAGAGATAATAAAGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAAAAGCGGCGGAGGATGTTATTGCGGAAGAAAATCCGAAAGAACCAGAAGGACGGAATCAAGAGCAATCTGAGCCAGGAGTTGCGGATACAGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGGCAGAGGATGTACAAGAAAAACAGGCAGAGGTTGCACCTGAAAAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAAGTGCCCAAACGCCGCCATATAAAGCGAAAAGCGGGCCGTGTTAAGGTAGTCCAAGCTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAGGACGTTCCAGTCAGCCTATTTAAAGAGGGAAGCAAATGCTTGGATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAAAGAATGAAAGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCATGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAACTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATTTTCAGCCCTTCCAACATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCACCGCCTGTCGAGAGAGAAGGAAATAGAGAAGAAGATCCGGGTCAGGAGGATTGA CTCCCACAAGTCGTTCTCGGCCAGGAGAATAGTAGGGAAGACTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCATTTGTGAGCTACAAAGAAATTACTTTGAGTCTTCCATGACCAAAACGAGAGCAAGAAAAGAGAGAGATAATAAAGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAAAAGCGGCGGAGGATGTTATTGCGGAAGAAAATCCGAAAGAACCAGAAGGACGGAATCAAGAGCAATCTGAGCCAGGAGTTGCGGATACAGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGGCAGAGGATGTACAAGAAAAACAGGCAGAGGTTGCACCTGAAAAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAAGTGCCCAAACGCCGCCATATAAAGCGAAAAGCGGGCCGTGTTAAGGTAGTCCAAGCTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAGGACGTTCCAGTCAGCCTATTTAAAGAGGGAAGCAAATGCTTGGATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAAAGAATGAAAGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCATGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAACTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATTTTCAGCCCTTCCAACATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCACCGCCTGTCGAGAGAGAAGGAAATAGAGAAGAAGATCCGGGTCAGGAGGATTGA LPQVVLGQENSREDSKGCPREVGEGKHHKEFLICELQRNYFESSMTKTRARKERDNKEEEVPVTPEAPKKAAEDVIAEENPKEPEGRNQEQSEPGVADTEEVREENTEEVREENTEEVQEKQAEDVQEKQAEVAPEKVNEQEQEARVEVIMPEVPKRRHIKRKAGRVKVVQADTPSPPTTDSERENAEKEEREKKEAEDKAREEAEKRTFQSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSASRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALPTFPEDLLNPWIPPPPVEREGNREEDPGQED Homology
BLAST of Spg019887 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 120.9 bits (302), Expect = 2.5e-23 Identity = 73/187 (39.04%), Postives = 99/187 (52.94%), Query Frame = 0
BLAST of Spg019887 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 119.0 bits (297), Expect = 9.5e-23 Identity = 69/197 (35.03%), Postives = 105/197 (53.30%), Query Frame = 0
BLAST of Spg019887 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii]) HSP 1 Score: 117.9 bits (294), Expect = 2.1e-22 Identity = 78/227 (34.36%), Postives = 115/227 (50.66%), Query Frame = 0
BLAST of Spg019887 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]) HSP 1 Score: 103.2 bits (256), Expect = 5.4e-18 Identity = 62/187 (33.16%), Postives = 105/187 (56.15%), Query Frame = 0
BLAST of Spg019887 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa]) HSP 1 Score: 89.7 bits (221), Expect = 6.2e-14 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-23 Identity = 73/187 (39.04%), Postives = 99/187 (52.94%), Query Frame = 0
BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.6e-23 Identity = 69/197 (35.03%), Postives = 105/197 (53.30%), Query Frame = 0
BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 1.0e-22 Identity = 78/227 (34.36%), Postives = 115/227 (50.66%), Query Frame = 0
BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.0e-14 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 0
BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 8.7e-14 Identity = 63/210 (30.00%), Postives = 99/210 (47.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|