Spg019887 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019887
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Locationscaffold5: 31897202 .. 31898926 (-)
RNA-Seq ExpressionSpg019887
SyntenySpg019887
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCCACAAGTCGTTCTCGGCCAGGAGAATAGTAGGGAAGACTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCATTTGTGAGCTACAAAGGTTGGTGTTCTCTAAACTCTCTTTTCTGTCTTTTATAGAACATGCATGCTTTAGGAGCAAAATTGAATGTCTTAAGTGCTTTCGATCTTCAATTGCTTCCGCATGTGTTATATGAACACCTTCAGCTGCCACGTGTCGCGCAGGGATAATCCAACGGTTTAGCCGTTGACAGCATGCAGTTATTTACCATGGGCGATTGAAATTCAAGTTTTTACCGTTAGTGGATTTGATTTGCAAATTAAATGTGAACGGTAAATCCATTTAATACAGGGCAAAATCTTTCGGTTACGATTTGATTTGCTGCAGCCCTATTTATTCCTAAGCCTTCGGTAAGTTCTTCTTCAATTTCTTGTCGTCCCTTGCTATTTGCATTCTTCTTTCTTTCTCTGTGTGCGACAGAAATTACTTTGAGTCTTCCATGACCAAAACGAGAGCAAGAAAAGAGAGAGATAATAAAGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAGTAAAGGCAAAGAAGAAGAAGACACCAGTAGAAAAAGAAGCTAAAAGAAGAAGAAAACAACAGAGGACTGAAGATCAAGAAGTTGTTTAGAAAGCGGCGGAGGATGTTATTGCGGAAGAAAATCCGAAAGAACCAGAAGGACGGAATCAAGAGCAATCTGAGCCAGGAGTTGCGGATACAGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGGCAGAGGATGTACAAGAAAAACAGGCAGAGGTTGCACCTGAAAAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAAGTGCCCAAACGCCGCCATATAAAGCGAAAAGCGGGCCGTGTTAAGGTAGTCCAAGCTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAGGACGTTCCAGTCAGCCTATTTAAAGAGGGAAGCAAATGCTTGGATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAAAGAATGAAAGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCATGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAACTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATTTTCAGCCCTTCCAACATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCACCGCCTGTCGAGAGAGAAGGAAATAGAGAAGAAGATCCGGGTCAGGAGGATTGA

mRNA sequence

CTCCCACAAGTCGTTCTCGGCCAGGAGAATAGTAGGGAAGACTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCATTTGTGAGCTACAAAGAAATTACTTTGAGTCTTCCATGACCAAAACGAGAGCAAGAAAAGAGAGAGATAATAAAGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAAAAGCGGCGGAGGATGTTATTGCGGAAGAAAATCCGAAAGAACCAGAAGGACGGAATCAAGAGCAATCTGAGCCAGGAGTTGCGGATACAGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGGCAGAGGATGTACAAGAAAAACAGGCAGAGGTTGCACCTGAAAAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAAGTGCCCAAACGCCGCCATATAAAGCGAAAAGCGGGCCGTGTTAAGGTAGTCCAAGCTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAGGACGTTCCAGTCAGCCTATTTAAAGAGGGAAGCAAATGCTTGGATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAAAGAATGAAAGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCATGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAACTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATTTTCAGCCCTTCCAACATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCACCGCCTGTCGAGAGAGAAGGAAATAGAGAAGAAGATCCGGGTCAGGAGGATTGA

Coding sequence (CDS)

CTCCCACAAGTCGTTCTCGGCCAGGAGAATAGTAGGGAAGACTCTAAAGGTTGTCCAAGAGAAGTTGGAGAAGGAAAACACCACAAGGAGTTCCTCATTTGTGAGCTACAAAGAAATTACTTTGAGTCTTCCATGACCAAAACGAGAGCAAGAAAAGAGAGAGATAATAAAGAAGAGGAGGTACCCGTGACCCCCGAAGCACCGAAAAAAGCGGCGGAGGATGTTATTGCGGAAGAAAATCCGAAAGAACCAGAAGGACGGAATCAAGAGCAATCTGAGCCAGGAGTTGCGGATACAGAGGAGGTTCGAGAAGAAAATACAGAGGAAGTTCGAGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGGCAGAGGATGTACAAGAAAAACAGGCAGAGGTTGCACCTGAAAAAGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGTGATCATGCCAGAAGTGCCCAAACGCCGCCATATAAAGCGAAAAGCGGGCCGTGTTAAGGTAGTCCAAGCTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGAATGCTGAGAAAGAAGAGCGTGAGAAGAAGGAGGCTGAGGATAAAGCAAGAGAGGAAGCAGAGAAAAGGACGTTCCAGTCAGCCTATTTAAAGAGGGAAGCAAATGCTTGGATGAGATTTATCAAACAAAGGTTGCTTCCAACGACTCATGACTCGACGGTTTCTAGGGAACGAGTGCTTCTGGCTTTCGCTATTTTGAGGTCTCTCAGTATTGATGTGGGAAAAATTATTGCTGATGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCCAAAGAATGAAAGAGATGTGATATTATTTGACAAGGGAATCATTGACACGCCTAACTTGGCGCGGCTTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCATGAGTTTGCCGAGAGGCAAGCTTTAACCTTCTGGAACTATGTTAGAACTCGTGATGCCAATCTGAAGAAGGCGCTACAGGAGAATTTTTCCAAACCATTTTCAGCCCTTCCAACATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCACCGCCTGTCGAGAGAGAAGGAAATAGAGAAGAAGATCCGGGTCAGGAGGATTGA

Protein sequence

LPQVVLGQENSREDSKGCPREVGEGKHHKEFLICELQRNYFESSMTKTRARKERDNKEEEVPVTPEAPKKAAEDVIAEENPKEPEGRNQEQSEPGVADTEEVREENTEEVREENTEEVQEKQAEDVQEKQAEVAPEKVNEQEQEARVEVIMPEVPKRRHIKRKAGRVKVVQADTPSPPTTDSERENAEKEEREKKEAEDKAREEAEKRTFQSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINTILEQLALSASRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALPTFPEDLLNPWIPPPPVEREGNREEDPGQED
Homology
BLAST of Spg019887 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-23
Identity = 73/187 (39.04%), Postives = 99/187 (52.94%), Query Frame = 0

Query: 219 ANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLF 278
           A  W  F+K RLLPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LF
Sbjct: 104 AKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALF 163

Query: 279 FPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARL------QRTQE-----------A 338
           FP+ IT LC+ A    NE    L + G ID   +AR+      + TQ+           +
Sbjct: 164 FPSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSS 223

Query: 339 RQGGLVYGINTILEQLALSASRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALP 389
           R  G V      LEQ     S+ E   +Q   FW Y + RD  LKKALQ NF++P    P
Sbjct: 224 RTNGDVLQQLKALEQ---RLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFP 283

BLAST of Spg019887 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 119.0 bits (297), Expect = 9.5e-23
Identity = 69/197 (35.03%), Postives = 105/197 (53.30%), Query Frame = 0

Query: 219 ANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLF 278
           A  W  F+K RLLPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LF
Sbjct: 174 AKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALF 233

Query: 279 FPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARLQR---TQEARQ------------ 338
           FP+ IT LC+ A  P    +  L + G ID   +AR+ +   T+  +Q            
Sbjct: 234 FPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSN 293

Query: 339 ---GGLVYGINTILEQLA---------LSASRHEFAERQALTFWNYVRTRDANLKKALQE 389
              G ++  +  + ++L+         +S  +H   ++Q   FW Y + RD  LKKALQ 
Sbjct: 294 RTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQ--QFWAYSKERDTALKKALQN 353

BLAST of Spg019887 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii])

HSP 1 Score: 117.9 bits (294), Expect = 2.1e-22
Identity = 78/227 (34.36%), Postives = 115/227 (50.66%), Query Frame = 0

Query: 193 EKKEAEDKAREEAEKRTF--QSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAI 252
           E + AE +  E  + R    +   L   A  W  F+K RLLPTTH  TVS++R+LL +++
Sbjct: 17  ETEAAETRHEENIQNRPLNAEKGALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSM 76

Query: 253 LRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVPKNERDVILFDKGIIDTP 312
           L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID  
Sbjct: 77  LTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAI 136

Query: 313 NLARLQRTQEAR--------------------QGGLVYGINTILEQLA---------LSA 372
            +AR+  TQE +                     G ++  +  + ++L+         +S 
Sbjct: 137 AVARI--TQEGQTELTQQPSTSRPTVASSSRANGDILQQLKALEQRLSQQEVQQYHMMSL 196

Query: 373 SRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALPTFPEDLL 389
            +H   ++Q   FW Y + RD  LKKALQ NF++P    PTFP++LL
Sbjct: 197 LQHTHKQQQ--QFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELL 239

BLAST of Spg019887 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])

HSP 1 Score: 103.2 bits (256), Expect = 5.4e-18
Identity = 62/187 (33.16%), Postives = 105/187 (56.15%), Query Frame = 0

Query: 208 RTFQSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEIS 267
           RT++++ LK  AN W+ FI+  L PTTHDS++S E+++L + ++   +I+VGK++   I 
Sbjct: 326 RTYRASNLKPNANVWINFIRYSLNPTTHDSSISVEKIILLYCVVTGRTINVGKVVEKAIL 385

Query: 268 GCWKKKVGKLFFPNTITMLCKRAGVPKNERDVIL---FDKGIIDTPNLARL-QRTQEARQ 327
            C K++ GKLFFP+ I  L  +AGVP+   D+++    +K  ID   +++L +R++  R+
Sbjct: 386 YCSKRRQGKLFFPSLIHKLLMQAGVPEYTDDLVIKECEEKWTIDMKAVSKLRERSERGRE 445

Query: 328 -GGLVYGINTILEQLALSASRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALPT 387
             G+   +  +LEQ   S S  +F   Q       ++T  A+L   L+ +  K       
Sbjct: 446 LPGVTRAMEELLEQ---SCSMMDFLIEQRAEMVEKLKTMQADLTTRLKASERKMKKRFEK 505

Query: 388 FPEDLLN 390
             EDL N
Sbjct: 506 LKEDLEN 509

BLAST of Spg019887 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa])

HSP 1 Score: 89.7 bits (221), Expect = 6.2e-14
Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 0

Query: 210  FQSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGC 269
            F+   LK++      F++  LLPT+HDSTVSRER+ + + I++   I+VGK+IA EI  C
Sbjct: 865  FKRTDLKQDIKCLYNFMQSTLLPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFEC 924

Query: 270  WKKKVGKLFFPNTITMLCKRAGVPKNERDVILFDKGIID-TPNLARLQRTQEARQGGLVY 329
              +  GKLFF   IT  C+ A VP    +  +  KG++   P+ A  + T          
Sbjct: 925  AHRVKGKLFFSCLITEKCRCANVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTA---- 984

Query: 330  GINTILEQLALSASRHEFAERQAL----TFWNYVRTRDANLKKALQENF 374
              +T  + +    S+HE  ++Q      T WNY R RD  + + L+ N+
Sbjct: 985  --STSRDPMDERLSKHEALQQQMCERLQTHWNYERERDVWMMQNLRRNW 1027

BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-23
Identity = 73/187 (39.04%), Postives = 99/187 (52.94%), Query Frame = 0

Query: 219 ANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLF 278
           A  W  F+K RLLPTTH   VS++R+LL  ++L   SI+VG++I  EI  C  +K G LF
Sbjct: 104 AKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIRACAAQKTGALF 163

Query: 279 FPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARL------QRTQE-----------A 338
           FP+ IT LC+ A    NE    L + G ID   +AR+      + TQ+           +
Sbjct: 164 FPSLITRLCRNAPFLVNEEK--LHNTGEIDAIAVARITQEGPTESTQQPSSSRPAAASSS 223

Query: 339 RQGGLVYGINTILEQLALSASRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALP 389
           R  G V      LEQ     S+ E   +Q   FW Y + RD  LKKALQ NF++P    P
Sbjct: 224 RTNGDVLQQLKALEQ---RLSQQEHTHKQQQQFWAYSKERDTALKKALQNNFTRPIPTFP 283

BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.6e-23
Identity = 69/197 (35.03%), Postives = 105/197 (53.30%), Query Frame = 0

Query: 219 ANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKVGKLF 278
           A  W  F+K RLLPTTH  TVS++R+LL  ++L   SI+VG++I  EI  C  +K G LF
Sbjct: 174 AKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALF 233

Query: 279 FPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARLQR---TQEARQ------------ 338
           FP+ IT LC+ A  P    +  L + G ID   +AR+ +   T+  +Q            
Sbjct: 234 FPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSN 293

Query: 339 ---GGLVYGINTILEQLA---------LSASRHEFAERQALTFWNYVRTRDANLKKALQE 389
              G ++  +  + ++L+         +S  +H   ++Q   FW Y + RD  LKKALQ 
Sbjct: 294 RTNGDILQQLKALEQRLSQQEVQQYHMMSLLQHTHKQQQ--QFWAYSKERDTALKKALQN 353

BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-22
Identity = 78/227 (34.36%), Postives = 115/227 (50.66%), Query Frame = 0

Query: 193 EKKEAEDKAREEAEKRTF--QSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAI 252
           E + AE +  E  + R    +   L   A  W  F+K RLLPTTH  TVS++R+LL +++
Sbjct: 17  ETEAAETRHEENIQNRPLNAEKGALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLYSM 76

Query: 253 LRSLSIDVGKIIADEISGCWKKKVGKLFFPNTITMLCKRAGVPKNERDVILFDKGIIDTP 312
           L   SI+VG++I  EI  C  +K G LFFP+ IT LC+ A  P    +  L   G ID  
Sbjct: 77  LTGKSINVGRMIHSEIRACAARKSGALFFPSLITQLCRNARAPFLVNEEKLHITGEIDAI 136

Query: 313 NLARLQRTQEAR--------------------QGGLVYGINTILEQLA---------LSA 372
            +AR+  TQE +                     G ++  +  + ++L+         +S 
Sbjct: 137 AVARI--TQEGQTELTQQPSTSRPTVASSSRANGDILQQLKALEQRLSQQEVQQYHMMSL 196

Query: 373 SRHEFAERQALTFWNYVRTRDANLKKALQENFSKPFSALPTFPEDLL 389
            +H   ++Q   FW Y + RD  LKKALQ NF++P    PTFP++LL
Sbjct: 197 LQHTHKQQQ--QFWAYSKERDTALKKALQNNFTRPIPTFPTFPQELL 239

BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.0e-14
Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 0

Query: 210  FQSAYLKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGC 269
            F+   LK++      F++  LLPT+HDSTVSRER+ + + I++   I+VGK+IA EI  C
Sbjct: 865  FKRTDLKQDIKCLYNFMQSTLLPTSHDSTVSRERMWMLYCIVKGKKINVGKVIAKEIFEC 924

Query: 270  WKKKVGKLFFPNTITMLCKRAGVPKNERDVILFDKGIID-TPNLARLQRTQEARQGGLVY 329
              +  GKLFF   IT  C+ A VP    +  +  KG++   P+ A  + T          
Sbjct: 925  AHRVKGKLFFSCLITEKCRCANVPMLNDEDPVPRKGVVSFEPDRAPKRTTPSTTTA---- 984

Query: 330  GINTILEQLALSASRHEFAERQAL----TFWNYVRTRDANLKKALQENF 374
              +T  + +    S+HE  ++Q      T WNY R RD  + + L+ N+
Sbjct: 985  --STSRDPMDERLSKHEALQQQMCERLQTHWNYERERDVWMMQNLRRNW 1027

BLAST of Spg019887 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 8.7e-14
Identity = 63/210 (30.00%), Postives = 99/210 (47.14%), Query Frame = 0

Query: 215  LKREANAWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIADEISGCWKKKV 274
            L+  A  W  F+K +L+PT+H++TVS  R+LL  +I+ S  IDVG+II  ++  C  KK 
Sbjct: 1000 LQLRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSIMVSHPIDVGRIIVQQVHDCLSKKA 1059

Query: 275  GKLFFPNTITMLCKRAGVPKNERDVILFDKGIIDTPNLARLQRTQEARQGGLVYGINT-- 334
              L FPN IT LC++  V +N  D IL     I    L  L   +  +    ++  +   
Sbjct: 1060 SALVFPNLITTLCRKKKVEENAFDEILPGLSSITRARLPLLLGIENPKYKDPIHEQSAGT 1119

Query: 335  ----------ILEQLALSASRHEFA-ERQALTFWNYVRTRDANLKKALQENFSKPFSALP 394
                       LE+  +    H  A       F+ YV+ RDA ++   QE         P
Sbjct: 1120 TQSNAEARLLALEEAVIQTQTHLHALHGNIYNFFGYVKHRDAVVESMFQEIIPHGQRNFP 1179

Query: 395  TFPEDLLNPWIPPPPVEREGNREEDPGQED 412
             F +++L+ +     +E + + EEDP  +D
Sbjct: 1180 GFLDEILSAFNAEASLEPKQD-EEDPLVDD 1208

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON78020.12.5e-2339.04hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON46472.19.5e-2335.03hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON59596.12.1e-2234.36hypothetical protein PanWU01x14_158080 [Parasponia andersonii][more]
XP_024971944.15.4e-1833.16uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus][more]
KAF4375842.16.2e-1433.73hypothetical protein G4B88_026421 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5DXM31.2e-2339.04Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5BCG44.6e-2335.03Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5CEY21.0e-2234.36Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE... [more]
A0A7J6FZ223.0e-1433.73Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1[more]
A0A6A2Y6978.7e-1430.00Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 G... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..208
NoneNo IPR availableCOILSCoilCoilcoord: 96..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..208
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..411

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019887.1Spg019887.1mRNA