Spg019840 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019840
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Locationscaffold5: 34335149 .. 34338058 (+)
RNA-Seq ExpressionSpg019840
SyntenySpg019840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATTCCTCCCTAGTCTGAAGTACATTGGTGGAAGGCAAGCCGTTATTCGAGGGACAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGAAGTGTTCAATGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAGCTGAACCTGTTGCAATGGAAAGACCAATTTTTTTGAAGTGGCGACCTAGTGCTCAACAAAACCCCGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATATCAATGTCAATGTGGCTAAAGAGGATGTAGATTCAGATATTGGGTCATATTCAAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAACCAGGTTGAGTTTAGGTGAGGGATGAGGTTTACCAGTCCGAAGGTCTTAAAAGATGCCATAAAAGAATATGCTGTTAGAAAGGCTCACAATATCAAATTCATAAAGAATGATAAGGTGAGGGTCACAACGGTTTGTTCTGGACAGTGTAAATGGAGGTTGCTGCTAGTGTTATTGAAAACGATAACACTATTCAAATTAAGACATACATGGGTGATCATACATGCAGTAGGGAATTTGCAAACAGGAACATGAACTCCAATTGGGTTGCCAAGATGTATTTGGAACGGTTTAGGAGTCAACCTAATTGGTCTCTTTCTGAAATTATGTTGAGGAGGTGAAGAATGACTATCAGGTAAGAATTTCTCGAAGTCAAGCCTATAGGGCAAGGCGTAAGGCAAACAGGAGGATCAATGGTAGTCTTAATGAACAATATAAGAAACTGTGGGATTATGCTGCAGAGATTAGGCGATCCAATGTTGGATCAACGGTGAAAATTCAATGTGAGAGGGTTACTGAAGATTCTCCCCCTGTTTTTAGGAGATGTTATGTTTGTTTTAAGGCTTGCAAGGACGGGTTCTTGGCGGGTTGCAGGCCATTTATTGCCTTAGATGCCTACCATCTAAAAGGTCCTTGTTAAGGGCAATTAATGGCTACAATTGGTGTTGATGGTGATGACAGTTTGTACCCTATTGCGTGGGCCGTAGTTGAGGCAGAAACGAAGGATAGCTGGACATGGTTCCTCGTTTTGCTACAAACAGACATTGGATGTTTCACATCTAAAGGATACACATTCATCTCAGATCAACAAAAGGTACGTATTTTTTCTTCAATAAAACATGTTAGTTATATTTTAGTGACTTGTAATGTTTACATTCAAACTTTCTTTTCATAGGGTTTAGTTCCAACGTTTGAGGAGTTTTTTCCAAATGTGGCTCATCGTTTCTGTGCGACATTTGTATGACAATTTTCAAAAAGAATTTAAAGGGTTGGTATTGAAAACTTTGTTTTGGAGGGCTGCTAAGTGTAACAACATGAAGGATTTTAATGATGTTATGACTGAGATTGGTAGGTTAAATGTTGGGGCTTACCAATATTTGAGTGGGATTCCTAGCAAGTATTGGTCTAGGCATGCCTTTCAATGTAATCCGAAGTGTGATTTCTTGCTTAATAATTTATCGGAGTCATTTAATGCACTTGTACTGCCAGCAAGAAACAAGCCTATAATTCAACTATTTGAAACCATTAGGAAGTTGGTAATGGTTAGGATAACCAAGAAGCATGAAAAATGTAATAGGATGGAAAAGGAAATTGGAAATAGAATTCTGAAGAAACTTGAGAAGAATATAAGTAGCTCTAGGAGTGCAATACCTTTGTGGGCTGGGAGTGGGAAGTTTGAAGTGGAGTCAGGTACAACTCAATATGCTGTAGATATTGATCAACAAACTTGTACGTGTGGGTTGTGGCAAGTAAGTGGGATTCCATGTCCACATGCTGTGCAGTGCATATATTATGTGAAAAAGAAGCCCGAAGAGTTTGTTGATGATGTATACAGAAAAAAAGCACTCATGGAAACCTACTCCCACTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCACCTGGCCGACCAAGAAAACAAAGGAAACGAGATGATGATGAAGTTGGGACTTCAAGTACCAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAACTCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGTAAGTATTACATTCCTAAACTTACTGTGTAACAAAATTCTATGTCATGAAAAATGAATTACTTACTGTGTTTGTTGTCTATCAGGAACATATTGGAACACAAGAGTCTGTTGCTGGAACTTCATCTACTCCACATGGGACTCCATCTGCTTCTGGGACTGCTTATACTGTAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGCGGGACATCCATCTGCTGCTTCAACTCCAAGTGCTGCCGGGCCTCCATTTGTTGCTAGACATCCATCTGCTGCTTCAACTCCAAGTGCTGTCGGGACTCCATTTGCTGCTGGCACTCCATATACTCCTGGACCTCCATCTGCTACTACAGCTTCAAGTTCTGCTGGGACTCCATCAACACCTCTAGGAACTACATCTGCTGCGACAAGAAGAGGAATGAAAAATAAGTGA

mRNA sequence

ATGGTATTCCTCCCTAGTCTGAAGTACATTGGTGGAAGGCAAGCCGTTATTCGAGGGACAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGAAGTGTTCAATGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAGCTGAACCTGTTGCAATGGAAAGACCAATTTTTTTGAAGTGGCGACCTAGTGCTCAACAAAACCCCGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATATCAATGTCAATGTGGCTAAAGAGGATGTAGATTCAGATATTGGGTCATATTCAAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAACCAGGTTGAGTTTAGGCATGCCTTTCAATGTAATCCGAAGTGTGATTTCTTGCTTAATAATTTATCGGAGTCATTTAATGCACTTGTACTGCCAGCAAGAAACAAGCCTATAATTCAACTATTTGAAACCATTAGGAAGTTGGTAATGGTTAGGATAACCAAGAAGCATGAAAAATGTAATAGGATGGAAAAGGAAATTGGAAATAGAATTCTGAAGAAACTTGAGAAGAATATAAGTAGCTCTAGGAGTGCAATACCTTTGTGGGCTGGGAGTGGGAAGTTTGAAGTGGAGTCAGGTACAACTCAATATGCTGTAGATATTGATCAACAAACTTGTACGTGTGGGTTGTGGCAAGTAAGTGGGATTCCATGTCCACATGCTGTGCAGTGCATATATTATGTGAAAAAGAAGCCCGAAGAGTTTGTTGATGATGTATACAGAAAAAAAGCACTCATGGAAACCTACTCCCACTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCACCTGGCCGACCAAGAAAACAAAGGAAACGAGATGATGATGAAGTTGGGACTTCAAGTACCAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAACTCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGAACATATTGGAACACAAGAGTCTGTTGCTGGAACTTCATCTACTCCACATGGGACTCCATCTGCTTCTGGGACTGCTTATACTGTAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGCGGGACATCCATCTGCTGCTTCAACTCCAAGTGCTGCCGGGCCTCCATTTGTTGCTAGACATCCATCTGCTGCTTCAACTCCAAGTGCTGTCGGGACTCCATTTGCTGCTGGCACTCCATATACTCCTGGACCTCCATCTGCTACTACAGCTTCAAGTTCTGCTGGGACTCCATCAACACCTCTAGGAACTACATCTGCTGCGACAAGAAGAGGAATGAAAAATAAGTGA

Coding sequence (CDS)

ATGGTATTCCTCCCTAGTCTGAAGTACATTGGTGGAAGGCAAGCCGTTATTCGAGGGACAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGAAGTGTTCAATGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAGCTGAACCTGTTGCAATGGAAAGACCAATTTTTTTGAAGTGGCGACCTAGTGCTCAACAAAACCCCGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATATCAATGTCAATGTGGCTAAAGAGGATGTAGATTCAGATATTGGGTCATATTCAAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAACCAGGTTGAGTTTAGGCATGCCTTTCAATGTAATCCGAAGTGTGATTTCTTGCTTAATAATTTATCGGAGTCATTTAATGCACTTGTACTGCCAGCAAGAAACAAGCCTATAATTCAACTATTTGAAACCATTAGGAAGTTGGTAATGGTTAGGATAACCAAGAAGCATGAAAAATGTAATAGGATGGAAAAGGAAATTGGAAATAGAATTCTGAAGAAACTTGAGAAGAATATAAGTAGCTCTAGGAGTGCAATACCTTTGTGGGCTGGGAGTGGGAAGTTTGAAGTGGAGTCAGGTACAACTCAATATGCTGTAGATATTGATCAACAAACTTGTACGTGTGGGTTGTGGCAAGTAAGTGGGATTCCATGTCCACATGCTGTGCAGTGCATATATTATGTGAAAAAGAAGCCCGAAGAGTTTGTTGATGATGTATACAGAAAAAAAGCACTCATGGAAACCTACTCCCACTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCACCTGGCCGACCAAGAAAACAAAGGAAACGAGATGATGATGAAGTTGGGACTTCAAGTACCAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAACTCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGAACATATTGGAACACAAGAGTCTGTTGCTGGAACTTCATCTACTCCACATGGGACTCCATCTGCTTCTGGGACTGCTTATACTGTAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGCGGGACATCCATCTGCTGCTTCAACTCCAAGTGCTGCCGGGCCTCCATTTGTTGCTAGACATCCATCTGCTGCTTCAACTCCAAGTGCTGTCGGGACTCCATTTGCTGCTGGCACTCCATATACTCCTGGACCTCCATCTGCTACTACAGCTTCAAGTTCTGCTGGGACTCCATCAACACCTCTAGGAACTACATCTGCTGCGACAAGAAGAGGAATGAAAAATAAGTGA

Protein sequence

MVFLPSLKYIGGRQAVIRGTDCDRVSLIELRMMLTDLEVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMVSIVPESRLIHIYVEHNPNIEVLDLAEPVAMERPIFLKWRPSAQQNPVQNQVELDDFVEVEVSGESSLSDSDSASSSLSRESIASLNINVNVAKEDVDSDIGSYSNLHTPIGSDEEEDVRGPEFRAETDMNQVEFRHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEKEIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVSGIPCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEVGTSSTKMPRKFRCGRCRLPGHNSRSCKGPVKKRSRKASSSTFMGFSIPCEHIGTQESVAGTSSTPHGTPSASGTAYTVTASAAEASYAAGTPYAAGHPSAASTPSAAGPPFVARHPSAASTPSAVGTPFAAGTPYTPGPPSATTASSSAGTPSTPLGTTSAATRRGMKNK
Homology
BLAST of Spg019840 vs. NCBI nr
Match: XP_014499551.1 (uncharacterized protein LOC106760651 [Vigna radiata var. radiata])

HSP 1 Score: 199.9 bits (507), Expect = 5.9e-47
Identity = 116/303 (38.28%), Postives = 170/303 (56.11%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           +HAF   P+CD  +NNLSESFN+ +L AR+KPII + E IR  +M R     EK N    
Sbjct: 247 KHAFSAYPRCDVXINNLSESFNSTILLARDKPIITMMEWIRSYIMSRFATLREKSNTYHG 306

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTT--QYAVDIDQQTCTCGLWQVSGI 325
           ++  +  K+L++ +  S + +P+WAG  KFEV  G T  ++ VD+   +C+C  W + GI
Sbjct: 307 DVMPKPRKRLDREVEKSGNWLPVWAGGSKFEVTHGFTMDKFVVDVSNHSCSCYFWDLVGI 366

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC HAV  I+Y  + PE++V   Y+K+A    Y+  ++P+NG  LWP++  EP+LPP+ +
Sbjct: 367 PCRHAVAAIHYKLENPEDYVHPYYKKEAYQTCYAPQIIPINGQQLWPRSETEPLLPPIYK 426

Query: 386 RPPGRPRKQRKRDDDEVGTSSTKMPRK---FRCGRCRLPGHNSRSCKGPVKKRSRKASSS 445
            PPGRP+K R+R+ DE   S +K+ +K    +C  C   GHN RSCK        K  SS
Sbjct: 427 TPPGRPKKLRRREADEY-VSHSKLSKKNIGMKCSSCHAYGHNVRSCK--------KGQSS 486

Query: 446 TFMGFSIPCEHIGTQESVAGTSSTPHGTPSASGT-AYTVTASAAEASYAAGTPYAAGHPS 503
              G +             G++ST  G  +++G  A   T   A AS   G   +AG P 
Sbjct: 487 KDTGVA------------RGSASTVRGASTSTGRGASASTGRGASASAGRGASASAGRPG 528

BLAST of Spg019840 vs. NCBI nr
Match: XP_004309344.1 (PREDICTED: uncharacterized protein LOC101295476, partial [Fragaria vesca subsp. vesca])

HSP 1 Score: 197.6 bits (501), Expect = 2.9e-46
Identity = 109/259 (42.08%), Postives = 153/259 (59.07%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           R  F    KCD LLNNL ESFNA +LPAR KP+I +FE IR  +M R+  + +K  +++ 
Sbjct: 241 RAHFNTVVKCDVLLNNLCESFNAFILPARTKPVITMFEDIRVRLMKRVHTRRDKMMKIQD 300

Query: 266 EIGNRILKKLEKN-ISSSRSAIPLWAGSGKFEVES-GTTQYAVDIDQQTCTCGLWQVSGI 325
            I  +  + LEKN + ++   IP  +GS K EVES G ++Y VD+ ++TC C  W +SGI
Sbjct: 301 PICPKPREILEKNKVKAATDCIPTGSGSAKIEVESIGGSKYVVDLQRRTCACRRWDLSGI 360

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC H V  IY+++ KPE+FVD  YR K  M+ YS+ + P+NG DLW +T  + ILPP   
Sbjct: 361 PCKHVVSTIYFMRLKPEDFVDPCYRTKTYMDIYSNTIKPVNGMDLWARTGNDAILPPRYN 420

Query: 386 RPPGRPRKQRKRDDDEVGTSSTKMPR---KFRCGRCRLPGHNSRSCK---GPVKKRSRKA 445
           R PGRP+  R +D  E  T  TK+ R     RC  C   GHN ++C     P +  S+K 
Sbjct: 421 RQPGRPKNMRTKDAFEKATDGTKLGRIQNSLRCSNCGTLGHNIKTCHRHLPPKENISKKR 480

Query: 446 SSSTFMGFSIPCEHIGTQE 457
             ++  G S   +  GT++
Sbjct: 481 KLNSGKGTSSTLQAKGTKK 499

BLAST of Spg019840 vs. NCBI nr
Match: XP_027905892.1 (uncharacterized protein LOC114165477 [Vigna unguiculata])

HSP 1 Score: 194.9 bits (494), Expect = 1.9e-45
Identity = 97/233 (41.63%), Postives = 140/233 (60.09%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           +HAF   P+CD L+NNLSESFN+ +L AR+KPII + E IR   M R     EK N    
Sbjct: 499 KHAFSIYPRCDVLMNNLSESFNSTILLARDKPIISMMEWIRSYTMSRFATLREKLNAYNG 558

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTT--QYAVDIDQQTCTCGLWQVSGI 325
            +  +  K+L++ +  S + +P+WAG  KFEV  G T  ++ VD+ + TCTC  W + GI
Sbjct: 559 NVMPKPQKRLDREVEKSGNWLPVWAGGSKFEVTQGFTMEKFVVDLSKHTCTCYFWDLVGI 618

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC HAV  I Y  + PE +V   Y+++A    YS  + P+NG  LWP++    + PP+ +
Sbjct: 619 PCRHAVAAINYKIENPEAYVHPCYKRQAYHACYSPEITPINGQQLWPRSNEPELFPPIYK 678

Query: 386 RPPGRPRKQRKRDDDEVGTSSTKMPRK---FRCGRCRLPGHNSRSCKGPVKKR 434
            PPGRP+K R+R+ DE   S +K+ +K    +C RC   GHN RSC+  ++ R
Sbjct: 679 TPPGRPKKLRRREADE-NVSHSKLSKKNLIMKCSRCNQIGHNIRSCRRGMRFR 730

BLAST of Spg019840 vs. NCBI nr
Match: XP_014499554.1 (uncharacterized protein LOC106760657 [Vigna radiata var. radiata])

HSP 1 Score: 194.9 bits (494), Expect = 1.9e-45
Identity = 109/293 (37.20%), Postives = 165/293 (56.31%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           +HAF   P+CD L+NNLSESFN+ +L AR+KPII + E IR  +M R     EK N    
Sbjct: 229 KHAFSAYPRCDELINNLSESFNSTILLARDKPIITMMEWIRSYIMSRFATLREKSNTYHG 288

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTT--QYAVDIDQQTCTCGLWQVSGI 325
           ++  +  K+L++ +  S + +P+WA   KFEV  G T  ++ VD+   +C+C  W + GI
Sbjct: 289 DVMPKPRKRLDREVEKSGNWLPVWARGAKFEVTHGFTMDKFVVDVSNHSCSCYFWNLVGI 348

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC HAV  I+Y  + PE++V   Y+K+A    Y+  ++P+NG  LWP++  EP+LPP  +
Sbjct: 349 PCRHAVFTIHYKLENPEDYVHPYYKKQAYQTCYAPEIIPINGQQLWPRSEAEPLLPPTYK 408

Query: 386 RPPGRPRKQRKRDDDEVGTSSTKMPRK---FRCGRCRLPGHNSRSCKGPVKKR---SRKA 445
           +PPGRP+K R+R+ DE   S +K+ +K    +C  C   GHN RSCK     +     + 
Sbjct: 409 KPPGRPKKLRRREADEY-VSHSKLSKKNIGMKCSSCHAYGHNVRSCKKGQSSKDTGGARG 468

Query: 446 SSSTFMGFSIPCEHIGTQESVAGTSSTPHGTPSASGTAYTVTASAAEASYAAG 491
           S+S   G S     +G+  +  G S++     SAS       +     S +AG
Sbjct: 469 SASAGRGASASAGRVGSASAGRGASTSGGRRASASAGRLGSASVGRVGSVSAG 520

BLAST of Spg019840 vs. NCBI nr
Match: XP_014506267.1 (uncharacterized protein LOC106766018 [Vigna radiata var. radiata])

HSP 1 Score: 193.7 bits (491), Expect = 4.2e-45
Identity = 106/290 (36.55%), Postives = 162/290 (55.86%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           +HAF   P+CD L+NNLSESFN+ +L AR+KPII + E IR  +M R     EK +    
Sbjct: 365 KHAFSAYPRCDVLINNLSESFNSTILLARDKPIITMMEWIRSYLMSRFASLREKVDSYPG 424

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTT--QYAVDIDQQTCTCGLWQVSGI 325
           ++  +  K+L++ +  S + +P+WAG  +FEV  G T  ++ VD+   TCTC LW + GI
Sbjct: 425 DVMPKSRKRLDREVEKSGNWLPVWAGGSQFEVTHGFTMDKFVVDLSNHTCTCYLWDLVGI 484

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC H V  I+Y  + PE +V   Y+K A    Y+  + P+NG  LWP +    +LPP+ +
Sbjct: 485 PCRHVVAAIHYKSENPENYVHPYYKKDAYRTCYAPTISPINGQQLWPTSDSPQLLPPIYK 544

Query: 386 RPPGRPRKQRKRDDDEVGTSS--TKMPRKFRCGRCRLPGHNSRSCKGPVKKRSRKASSST 445
            PPGRP K R+R+ DE  T    +K     RC  C   GHN R+CK   K ++++ +S++
Sbjct: 545 TPPGRPTKLRRREADEYVTHGKLSKTNTAIRCSNCNAFGHNLRTCKKSQKSKNKRGASAS 604

Query: 446 FMGFSIPCEHIGTQESVAGTSSTPHGTPSASGTAYTVTASAAEASYAAGT 492
             G ++       + + AG  ++   + +  G+A    A AA  S   G+
Sbjct: 605 TPGSAV------GRGACAGRGASSSTSQAGRGSARDAEAGAASTSGVGGS 648

BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9FZE3 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20475 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.0e-49
Identity = 111/284 (39.08%), Postives = 155/284 (54.58%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           RHAF   PKCD LLNNL E+FN+ ++ AR KPII + ETIR+ +M RI K  +   + + 
Sbjct: 598 RHAFPHYPKCDMLLNNLCETFNSKIVNARTKPIITMLETIRRYLMTRIQKNRDAMLKYQG 657

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVSGIPC 325
            I  RI +KL+K  + S+   P W G  ++EV S   +Y VDI +++C C  W ++GIPC
Sbjct: 658 PICPRIQEKLQKCKAESKGCTPKWGGGNRYEVTSDGKKYIVDIVKKSCACNKWDLTGIPC 717

Query: 326 PHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRP 385
            HAV+ I Y     E++VDD ++KK  ++ YSH + P NG D WP    +P+LPP+ RR 
Sbjct: 718 KHAVRAISYKGHNAEDYVDDYFKKKTYLKVYSHLIQPCNGPDFWPIAAGDPVLPPIHRRQ 777

Query: 386 PGRPRKQRKRDDDEVGTSSTKMPR---KFRCGRCRLPGHNSRSCK-------------GP 445
           PGRP++  +R D +   +S K+ R     +CG+C   GHN RSCK               
Sbjct: 778 PGRPKRMHRRKDPDEHQNSHKLKRNQNSLKCGQCHQVGHNKRSCKKKQTMPAGVGQTEAR 837

Query: 446 VKKRSRKASSS-------------TFMGFSIPCEHIGTQESVAG 461
            K R   ASS+              FMGF IP   +  +    G
Sbjct: 838 EKGRKNVASSNKGNGKKRAGSTDVNFMGFKIPASVVQDETRAKG 881

BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9FZE3 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20475 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-07
Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 8   KYIGGRQAVIRGTDCDRVSLIELRMMLTDLEVFNVEEFYYVRPGYTLSTGFKVLLTDADV 67
           KYIGG   V    + D  S+ E+  M  +L V+N  +FYYV PG  LS G + L TD+ +
Sbjct: 24  KYIGGTVLVYDNMEIDLFSVQEIETMCKELGVYNYMQFYYVIPGCDLSDGLRYLSTDSHI 83

Query: 68  VQMVS-IVPESRLIHIYVEHNPNIEVLDLAEPVAMERPIFLK 109
           ++M   + P +  + +YVEH       +   P++M++PI ++
Sbjct: 84  IEMSKCLTPLNPKVDVYVEH-------ETPNPLSMDKPIVIR 118


HSP 2 Score: 208.0 bits (528), Expect = 1.0e-49
Identity = 99/225 (44.00%), Postives = 140/225 (62.22%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           RHAF   PKCD LLNNL E+FN+ ++ AR KPII + ETIR+ +M RI K  +   + + 
Sbjct: 548 RHAFPHYPKCDMLLNNLCETFNSKIVNARTKPIITMLETIRRYLMTRIQKNRDAMLKYQG 607

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVSGIPC 325
            I  RI +KL+K  + S+   P W G  ++EV S   +Y VDI +++C C  W ++GIPC
Sbjct: 608 PICPRIQEKLQKCKAESKGCTPKWGGGNRYEVTSDGKKYIVDIVKKSCACNKWDLTGIPC 667

Query: 326 PHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRP 385
            HAV+ I Y     E++VDD ++KK  ++ YSH + P NG D WP    +P+LPP+ RR 
Sbjct: 668 KHAVRAISYKGHNAEDYVDDYFKKKTYLKVYSHLIQPCNGPDFWPIAAGDPVLPPIHRRQ 727

Query: 386 PGRPRKQRKRDDDEVGTSSTKMPR---KFRCGRCRLPGHNSRSCK 428
           PGRP++  +R D +   +S K+ R     +CG+C   GHN RSCK
Sbjct: 728 PGRPKRMHRRKDPDEHQNSHKLKRNQNSLKCGQCHQVGHNKRSCK 772

BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9IR75 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54757 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.9e-07
Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0

Query: 8   KYIGGRQAVIRGTDCDRVSLIELRMMLTDLEVFNVEEFYYVRPGYTLSTGFKVLLTDADV 67
           KYIGG   V    + D  S+ E+  M  +L V+N  +FYYV PG  LS G + L TD+ +
Sbjct: 24  KYIGGTVLVYDNMEIDLFSVQEIETMCKELGVYNYMQFYYVIPGCDLSDGLRYLSTDSHI 83

Query: 68  VQMVS-IVPESRLIHIYVEHNPNIEVLDLAEPVAMERPIFLK 109
           ++M   + P +  + +YVEH       +   P++M++PI ++
Sbjct: 84  IEMSKCLTPLNPKVDVYVEH-------ETPNPLSMDKPIVIR 118


HSP 2 Score: 199.9 bits (507), Expect = 2.9e-47
Identity = 116/303 (38.28%), Postives = 170/303 (56.11%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           +HAF   P+CD  +NNLSESFN+ +L AR+KPII + E IR  +M R     EK N    
Sbjct: 247 KHAFSAYPRCDVXINNLSESFNSTILLARDKPIITMMEWIRSYIMSRFATLREKSNTYHG 306

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTT--QYAVDIDQQTCTCGLWQVSGI 325
           ++  +  K+L++ +  S + +P+WAG  KFEV  G T  ++ VD+   +C+C  W + GI
Sbjct: 307 DVMPKPRKRLDREVEKSGNWLPVWAGGSKFEVTHGFTMDKFVVDVSNHSCSCYFWDLVGI 366

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC HAV  I+Y  + PE++V   Y+K+A    Y+  ++P+NG  LWP++  EP+LPP+ +
Sbjct: 367 PCRHAVAAIHYKLENPEDYVHPYYKKEAYQTCYAPQIIPINGQQLWPRSETEPLLPPIYK 426

Query: 386 RPPGRPRKQRKRDDDEVGTSSTKMPRK---FRCGRCRLPGHNSRSCKGPVKKRSRKASSS 445
            PPGRP+K R+R+ DE   S +K+ +K    +C  C   GHN RSCK        K  SS
Sbjct: 427 TPPGRPKKLRRREADEY-VSHSKLSKKNIGMKCSSCHAYGHNVRSCK--------KGQSS 486

Query: 446 TFMGFSIPCEHIGTQESVAGTSSTPHGTPSASGT-AYTVTASAAEASYAAGTPYAAGHPS 503
              G +             G++ST  G  +++G  A   T   A AS   G   +AG P 
Sbjct: 487 KDTGVA------------RGSASTVRGASTSTGRGASASTGRGASASAGRGASASAGRPG 528

BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A1S3U0L8 (uncharacterized protein LOC106760657 OS=Vigna radiata var. radiata OX=3916 GN=LOC106760657 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.2e-46
Identity = 109/293 (37.20%), Postives = 165/293 (56.31%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           +HAF   P+CD L+NNLSESFN+ +L AR+KPII + E IR  +M R     EK N    
Sbjct: 229 KHAFSAYPRCDELINNLSESFNSTILLARDKPIITMMEWIRSYIMSRFATLREKSNTYHG 288

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTT--QYAVDIDQQTCTCGLWQVSGI 325
           ++  +  K+L++ +  S + +P+WA   KFEV  G T  ++ VD+   +C+C  W + GI
Sbjct: 289 DVMPKPRKRLDREVEKSGNWLPVWARGAKFEVTHGFTMDKFVVDVSNHSCSCYFWNLVGI 348

Query: 326 PCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIR 385
           PC HAV  I+Y  + PE++V   Y+K+A    Y+  ++P+NG  LWP++  EP+LPP  +
Sbjct: 349 PCRHAVFTIHYKLENPEDYVHPYYKKQAYQTCYAPEIIPINGQQLWPRSEAEPLLPPTYK 408

Query: 386 RPPGRPRKQRKRDDDEVGTSSTKMPRK---FRCGRCRLPGHNSRSCKGPVKKR---SRKA 445
           +PPGRP+K R+R+ DE   S +K+ +K    +C  C   GHN RSCK     +     + 
Sbjct: 409 KPPGRPKKLRRREADEY-VSHSKLSKKNIGMKCSSCHAYGHNVRSCKKGQSSKDTGGARG 468

Query: 446 SSSTFMGFSIPCEHIGTQESVAGTSSTPHGTPSASGTAYTVTASAAEASYAAG 491
           S+S   G S     +G+  +  G S++     SAS       +     S +AG
Sbjct: 469 SASAGRGASASAGRVGSASAGRGASTSGGRRASASAGRLGSASVGRVGSVSAG 520

BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9I0N2 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45432 PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.6e-45
Identity = 119/336 (35.42%), Postives = 172/336 (51.19%), Query Frame = 0

Query: 206 RHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEK 265
           RHAF   PKCD LLNNL E+FN+ ++ AR KPII + ETIR+ +M RI K  +   + + 
Sbjct: 582 RHAFPHYPKCDMLLNNLCETFNSKIVNARTKPIITMLETIRRYLMTRIQKNRDAMLKYQG 641

Query: 266 EIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVSGIPC 325
            I  RI +KL+K  + S+   P W G  ++EV S   +Y VDI +++C C  W ++GIPC
Sbjct: 642 PICPRIQEKLQKCKAESKGCTPKWGGGNRYEVTSDGKKYIVDIVKKSCACNKWDLTGIPC 701

Query: 326 PHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRP 385
            HAV+ I Y     E++VDD ++KK  ++ YSH + P NG D WP    +P+LPP+ RR 
Sbjct: 702 KHAVRAISYKGHNAEDYVDDYFKKKTYLKVYSHLIQPCNGPDFWPIAAGDPVLPPIHRRQ 761

Query: 386 PGRPRKQRKRDDDEVGTSSTKMPR---KFRCGRCRLPGHNSRSCK-------------GP 445
           PGRP++  +R D +   +S K+ R     +CG+C   GHN RSCK               
Sbjct: 762 PGRPKRMHRRKDPDEHQNSHKLKRNQNSLKCGQCHQVGHNKRSCKKKQTMPAGVGQTEAR 821

Query: 446 VKKRSRKASSS-------------TFMGFSIPCEHIGTQESVAG-----TSSTPHGTPSA 505
            K R   ASS+              FMGF IP   +  +    G     +S   +G   A
Sbjct: 822 EKGRKNVASSNKGNGKKRAGSTDVNFMGFKIPASVVQDETRAKGKKNMASSDKGNGKRGA 881

Query: 506 SGTAYTVTASAAEASYAAGTPYAAGHPSAASTPSAA 508
           + T             ++      G P+A ++ + A
Sbjct: 882 ANTEENSMGFRVPIGMSSQQSNILGSPAAYNSSAPA 917

BLAST of Spg019840 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 61.6 bits (148), Expect = 2.3e-09
Identity = 34/100 (34.00%), Postives = 51/100 (51.00%), Query Frame = 0

Query: 301 TTQYAVDIDQQTCTCGLWQVSGIPCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFL 360
           +T   V ++  TCTCG +Q +  PC HA+     +K  P ++VDD Y  +   +TYS   
Sbjct: 647 STSGIVQLNDTTCTCGEFQKNKFPCLHALAVCDELKINPLQYVDDCYTVERYHKTYSAKF 706

Query: 361 LPLNGHDLWPKTTYEP-ILPPVIRRPPGRPRKQRKRDDDE 400
            P+     WP+    P ++PPVI  PP +   + K  D E
Sbjct: 707 SPVPELSAWPEAYGVPTLIPPVIEPPPPKVSGKGKEKDTE 746

BLAST of Spg019840 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 51.2 bits (121), Expect = 3.2e-06
Identity = 49/189 (25.93%), Postives = 80/189 (42.33%), Query Frame = 0

Query: 210 QCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEKEIGN 269
           + N K  F + N  E    +V  +    ++ LF+ +R         K   C+R     G+
Sbjct: 550 EINTKALFAVCNAFEQAGHVVTGS----VLLLFDELRSKF-----DKSFSCSRSSLNCGD 609

Query: 270 ----RILKKLEK----NISSSRSAIPLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVS 329
                ++ KLE+     ++ S    PL   + +        +  V +   +CTCG +Q  
Sbjct: 610 VYTEPVMDKLEEFRTTFVTYSYIVTPLDNNAFQVATALDKGECIVQLSDCSCTCGDFQRY 669

Query: 330 GIPCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEP-ILPP 389
             PC HA+     +K  P ++VDD Y  + L  TY+     +     WP+ +  P +LPP
Sbjct: 670 KFPCLHALAVCKKLKFNPLQYVDDCYTLERLKRTYATIFSHVPEMSAWPEASGVPRLLPP 727

BLAST of Spg019840 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 48.9 bits (115), Expect = 1.6e-05
Identity = 31/111 (27.93%), Postives = 51/111 (45.95%), Query Frame = 0

Query: 272 LKKLEKNISSSRSAI--PLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVSGIPCPHAV 331
           + KLE+ ++ S   +   L   S K    S   ++ V ++  TCTC  +Q    PC HA+
Sbjct: 600 MDKLEEFMTDSIPYVITQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHAL 659

Query: 332 QCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPP 381
                +K  P ++VD+ Y  +   +TY+    P+     WP+    P L P
Sbjct: 660 AVFEKLKINPLQYVDECYTVEQYCKTYAATFSPVPDVAAWPEDCRVPTLFP 710

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_014499551.15.9e-4738.28uncharacterized protein LOC106760651 [Vigna radiata var. radiata][more]
XP_004309344.12.9e-4642.08PREDICTED: uncharacterized protein LOC101295476, partial [Fragaria vesca subsp. ... [more]
XP_027905892.11.9e-4541.63uncharacterized protein LOC114165477 [Vigna unguiculata][more]
XP_014499554.11.9e-4537.20uncharacterized protein LOC106760657 [Vigna radiata var. radiata][more]
XP_014506267.14.2e-4536.55uncharacterized protein LOC106766018 [Vigna radiata var. radiata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9FZE31.0e-4939.08SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2047... [more]
A0A2N9FZE34.9e-0734.31SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2047... [more]
A0A2N9IR754.9e-0734.31SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5475... [more]
A0A1S3U0L89.2e-4637.20uncharacterized protein LOC106760657 OS=Vigna radiata var. radiata OX=3916 GN=LO... [more]
A0A2N9I0N21.6e-4535.42SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4543... [more]

Pages

Match NameE-valueIdentityDescription
AT1G49920.12.3e-0934.00MuDR family transposase [more]
AT1G64255.13.2e-0625.93MuDR family transposase [more]
AT1G64260.11.6e-0527.93MuDR family transposase [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006564Zinc finger, PMZ-typeSMARTSM0057526again6coord: 311..338
e-value: 4.6E-4
score: 29.2
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 306..329
e-value: 3.1E-6
score: 26.7
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 304..336
score: 10.447306
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..570
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 493..570
NoneNo IPR availablePANTHERPTHR31973:SF117F10A16.15 PROTEINcoord: 209..424
NoneNo IPR availablePANTHERPTHR31973POLYPROTEIN, PUTATIVE-RELATEDcoord: 209..424

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019840.1Spg019840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding