Spg019840 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTATTCCTCCCTAGTCTGAAGTACATTGGTGGAAGGCAAGCCGTTATTCGAGGGACAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGAAGTGTTCAATGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAGCTGAACCTGTTGCAATGGAAAGACCAATTTTTTTGAAGTGGCGACCTAGTGCTCAACAAAACCCCGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATATCAATGTCAATGTGGCTAAAGAGGATGTAGATTCAGATATTGGGTCATATTCAAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAACCAGGTTGAGTTTAGGTGAGGGATGAGGTTTACCAGTCCGAAGGTCTTAAAAGATGCCATAAAAGAATATGCTGTTAGAAAGGCTCACAATATCAAATTCATAAAGAATGATAAGGTGAGGGTCACAACGGTTTGTTCTGGACAGTGTAAATGGAGGTTGCTGCTAGTGTTATTGAAAACGATAACACTATTCAAATTAAGACATACATGGGTGATCATACATGCAGTAGGGAATTTGCAAACAGGAACATGAACTCCAATTGGGTTGCCAAGATGTATTTGGAACGGTTTAGGAGTCAACCTAATTGGTCTCTTTCTGAAATTATGTTGAGGAGGTGAAGAATGACTATCAGGTAAGAATTTCTCGAAGTCAAGCCTATAGGGCAAGGCGTAAGGCAAACAGGAGGATCAATGGTAGTCTTAATGAACAATATAAGAAACTGTGGGATTATGCTGCAGAGATTAGGCGATCCAATGTTGGATCAACGGTGAAAATTCAATGTGAGAGGGTTACTGAAGATTCTCCCCCTGTTTTTAGGAGATGTTATGTTTGTTTTAAGGCTTGCAAGGACGGGTTCTTGGCGGGTTGCAGGCCATTTATTGCCTTAGATGCCTACCATCTAAAAGGTCCTTGTTAAGGGCAATTAATGGCTACAATTGGTGTTGATGGTGATGACAGTTTGTACCCTATTGCGTGGGCCGTAGTTGAGGCAGAAACGAAGGATAGCTGGACATGGTTCCTCGTTTTGCTACAAACAGACATTGGATGTTTCACATCTAAAGGATACACATTCATCTCAGATCAACAAAAGGTACGTATTTTTTCTTCAATAAAACATGTTAGTTATATTTTAGTGACTTGTAATGTTTACATTCAAACTTTCTTTTCATAGGGTTTAGTTCCAACGTTTGAGGAGTTTTTTCCAAATGTGGCTCATCGTTTCTGTGCGACATTTGTATGACAATTTTCAAAAAGAATTTAAAGGGTTGGTATTGAAAACTTTGTTTTGGAGGGCTGCTAAGTGTAACAACATGAAGGATTTTAATGATGTTATGACTGAGATTGGTAGGTTAAATGTTGGGGCTTACCAATATTTGAGTGGGATTCCTAGCAAGTATTGGTCTAGGCATGCCTTTCAATGTAATCCGAAGTGTGATTTCTTGCTTAATAATTTATCGGAGTCATTTAATGCACTTGTACTGCCAGCAAGAAACAAGCCTATAATTCAACTATTTGAAACCATTAGGAAGTTGGTAATGGTTAGGATAACCAAGAAGCATGAAAAATGTAATAGGATGGAAAAGGAAATTGGAAATAGAATTCTGAAGAAACTTGAGAAGAATATAAGTAGCTCTAGGAGTGCAATACCTTTGTGGGCTGGGAGTGGGAAGTTTGAAGTGGAGTCAGGTACAACTCAATATGCTGTAGATATTGATCAACAAACTTGTACGTGTGGGTTGTGGCAAGTAAGTGGGATTCCATGTCCACATGCTGTGCAGTGCATATATTATGTGAAAAAGAAGCCCGAAGAGTTTGTTGATGATGTATACAGAAAAAAAGCACTCATGGAAACCTACTCCCACTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCACCTGGCCGACCAAGAAAACAAAGGAAACGAGATGATGATGAAGTTGGGACTTCAAGTACCAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAACTCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGTAAGTATTACATTCCTAAACTTACTGTGTAACAAAATTCTATGTCATGAAAAATGAATTACTTACTGTGTTTGTTGTCTATCAGGAACATATTGGAACACAAGAGTCTGTTGCTGGAACTTCATCTACTCCACATGGGACTCCATCTGCTTCTGGGACTGCTTATACTGTAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGCGGGACATCCATCTGCTGCTTCAACTCCAAGTGCTGCCGGGCCTCCATTTGTTGCTAGACATCCATCTGCTGCTTCAACTCCAAGTGCTGTCGGGACTCCATTTGCTGCTGGCACTCCATATACTCCTGGACCTCCATCTGCTACTACAGCTTCAAGTTCTGCTGGGACTCCATCAACACCTCTAGGAACTACATCTGCTGCGACAAGAAGAGGAATGAAAAATAAGTGA ATGGTATTCCTCCCTAGTCTGAAGTACATTGGTGGAAGGCAAGCCGTTATTCGAGGGACAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGAAGTGTTCAATGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAGCTGAACCTGTTGCAATGGAAAGACCAATTTTTTTGAAGTGGCGACCTAGTGCTCAACAAAACCCCGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATATCAATGTCAATGTGGCTAAAGAGGATGTAGATTCAGATATTGGGTCATATTCAAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAACCAGGTTGAGTTTAGGCATGCCTTTCAATGTAATCCGAAGTGTGATTTCTTGCTTAATAATTTATCGGAGTCATTTAATGCACTTGTACTGCCAGCAAGAAACAAGCCTATAATTCAACTATTTGAAACCATTAGGAAGTTGGTAATGGTTAGGATAACCAAGAAGCATGAAAAATGTAATAGGATGGAAAAGGAAATTGGAAATAGAATTCTGAAGAAACTTGAGAAGAATATAAGTAGCTCTAGGAGTGCAATACCTTTGTGGGCTGGGAGTGGGAAGTTTGAAGTGGAGTCAGGTACAACTCAATATGCTGTAGATATTGATCAACAAACTTGTACGTGTGGGTTGTGGCAAGTAAGTGGGATTCCATGTCCACATGCTGTGCAGTGCATATATTATGTGAAAAAGAAGCCCGAAGAGTTTGTTGATGATGTATACAGAAAAAAAGCACTCATGGAAACCTACTCCCACTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCACCTGGCCGACCAAGAAAACAAAGGAAACGAGATGATGATGAAGTTGGGACTTCAAGTACCAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAACTCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGAACATATTGGAACACAAGAGTCTGTTGCTGGAACTTCATCTACTCCACATGGGACTCCATCTGCTTCTGGGACTGCTTATACTGTAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGCGGGACATCCATCTGCTGCTTCAACTCCAAGTGCTGCCGGGCCTCCATTTGTTGCTAGACATCCATCTGCTGCTTCAACTCCAAGTGCTGTCGGGACTCCATTTGCTGCTGGCACTCCATATACTCCTGGACCTCCATCTGCTACTACAGCTTCAAGTTCTGCTGGGACTCCATCAACACCTCTAGGAACTACATCTGCTGCGACAAGAAGAGGAATGAAAAATAAGTGA ATGGTATTCCTCCCTAGTCTGAAGTACATTGGTGGAAGGCAAGCCGTTATTCGAGGGACAGATTGTGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTGACTGATCTTGAAGTGTTCAATGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTGTCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTAGACCTAGCTGAACCTGTTGCAATGGAAAGACCAATTTTTTTGAAGTGGCGACCTAGTGCTCAACAAAACCCCGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATAGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATATCAATGTCAATGTGGCTAAAGAGGATGTAGATTCAGATATTGGGTCATATTCAAATCTCCATACACCTATAGGGTCTGACGAAGAAGAGGATGTTAGGGGTCCTGAATTTAGGGCTGAGACGGATATGAACCAGGTTGAGTTTAGGCATGCCTTTCAATGTAATCCGAAGTGTGATTTCTTGCTTAATAATTTATCGGAGTCATTTAATGCACTTGTACTGCCAGCAAGAAACAAGCCTATAATTCAACTATTTGAAACCATTAGGAAGTTGGTAATGGTTAGGATAACCAAGAAGCATGAAAAATGTAATAGGATGGAAAAGGAAATTGGAAATAGAATTCTGAAGAAACTTGAGAAGAATATAAGTAGCTCTAGGAGTGCAATACCTTTGTGGGCTGGGAGTGGGAAGTTTGAAGTGGAGTCAGGTACAACTCAATATGCTGTAGATATTGATCAACAAACTTGTACGTGTGGGTTGTGGCAAGTAAGTGGGATTCCATGTCCACATGCTGTGCAGTGCATATATTATGTGAAAAAGAAGCCCGAAGAGTTTGTTGATGATGTATACAGAAAAAAAGCACTCATGGAAACCTACTCCCACTTTCTTCTACCTTTGAATGGTCATGACCTTTGGCCAAAGACGACGTATGAGCCCATTCTCCCACCAGTTATCCGAAGACCACCTGGCCGACCAAGAAAACAAAGGAAACGAGATGATGATGAAGTTGGGACTTCAAGTACCAAAATGCCTAGGAAGTTTAGATGCGGTAGATGTAGGTTGCCCGGACACAACTCTAGATCTTGCAAAGGTCCAGTGAAGAAGAGATCAAGGAAAGCATCAAGTTCTACATTCATGGGGTTTAGTATTCCATGTGAACATATTGGAACACAAGAGTCTGTTGCTGGAACTTCATCTACTCCACATGGGACTCCATCTGCTTCTGGGACTGCTTATACTGTAACTGCATCTGCTGCCGAGGCTTCATATGCTGCTGGGACTCCTTATGCTGCGGGACATCCATCTGCTGCTTCAACTCCAAGTGCTGCCGGGCCTCCATTTGTTGCTAGACATCCATCTGCTGCTTCAACTCCAAGTGCTGTCGGGACTCCATTTGCTGCTGGCACTCCATATACTCCTGGACCTCCATCTGCTACTACAGCTTCAAGTTCTGCTGGGACTCCATCAACACCTCTAGGAACTACATCTGCTGCGACAAGAAGAGGAATGAAAAATAAGTGA MVFLPSLKYIGGRQAVIRGTDCDRVSLIELRMMLTDLEVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMVSIVPESRLIHIYVEHNPNIEVLDLAEPVAMERPIFLKWRPSAQQNPVQNQVELDDFVEVEVSGESSLSDSDSASSSLSRESIASLNINVNVAKEDVDSDIGSYSNLHTPIGSDEEEDVRGPEFRAETDMNQVEFRHAFQCNPKCDFLLNNLSESFNALVLPARNKPIIQLFETIRKLVMVRITKKHEKCNRMEKEIGNRILKKLEKNISSSRSAIPLWAGSGKFEVESGTTQYAVDIDQQTCTCGLWQVSGIPCPHAVQCIYYVKKKPEEFVDDVYRKKALMETYSHFLLPLNGHDLWPKTTYEPILPPVIRRPPGRPRKQRKRDDDEVGTSSTKMPRKFRCGRCRLPGHNSRSCKGPVKKRSRKASSSTFMGFSIPCEHIGTQESVAGTSSTPHGTPSASGTAYTVTASAAEASYAAGTPYAAGHPSAASTPSAAGPPFVARHPSAASTPSAVGTPFAAGTPYTPGPPSATTASSSAGTPSTPLGTTSAATRRGMKNK Homology
BLAST of Spg019840 vs. NCBI nr
Match: XP_014499551.1 (uncharacterized protein LOC106760651 [Vigna radiata var. radiata]) HSP 1 Score: 199.9 bits (507), Expect = 5.9e-47 Identity = 116/303 (38.28%), Postives = 170/303 (56.11%), Query Frame = 0
BLAST of Spg019840 vs. NCBI nr
Match: XP_004309344.1 (PREDICTED: uncharacterized protein LOC101295476, partial [Fragaria vesca subsp. vesca]) HSP 1 Score: 197.6 bits (501), Expect = 2.9e-46 Identity = 109/259 (42.08%), Postives = 153/259 (59.07%), Query Frame = 0
BLAST of Spg019840 vs. NCBI nr
Match: XP_027905892.1 (uncharacterized protein LOC114165477 [Vigna unguiculata]) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-45 Identity = 97/233 (41.63%), Postives = 140/233 (60.09%), Query Frame = 0
BLAST of Spg019840 vs. NCBI nr
Match: XP_014499554.1 (uncharacterized protein LOC106760657 [Vigna radiata var. radiata]) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-45 Identity = 109/293 (37.20%), Postives = 165/293 (56.31%), Query Frame = 0
BLAST of Spg019840 vs. NCBI nr
Match: XP_014506267.1 (uncharacterized protein LOC106766018 [Vigna radiata var. radiata]) HSP 1 Score: 193.7 bits (491), Expect = 4.2e-45 Identity = 106/290 (36.55%), Postives = 162/290 (55.86%), Query Frame = 0
BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9FZE3 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20475 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.0e-49 Identity = 111/284 (39.08%), Postives = 155/284 (54.58%), Query Frame = 0
BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9FZE3 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20475 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.9e-07 Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0
HSP 2 Score: 208.0 bits (528), Expect = 1.0e-49 Identity = 99/225 (44.00%), Postives = 140/225 (62.22%), Query Frame = 0
BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9IR75 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS54757 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.9e-07 Identity = 35/102 (34.31%), Postives = 57/102 (55.88%), Query Frame = 0
HSP 2 Score: 199.9 bits (507), Expect = 2.9e-47 Identity = 116/303 (38.28%), Postives = 170/303 (56.11%), Query Frame = 0
BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A1S3U0L8 (uncharacterized protein LOC106760657 OS=Vigna radiata var. radiata OX=3916 GN=LOC106760657 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 9.2e-46 Identity = 109/293 (37.20%), Postives = 165/293 (56.31%), Query Frame = 0
BLAST of Spg019840 vs. ExPASy TrEMBL
Match: A0A2N9I0N2 (SWIM-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45432 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 1.6e-45 Identity = 119/336 (35.42%), Postives = 172/336 (51.19%), Query Frame = 0
BLAST of Spg019840 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase ) HSP 1 Score: 61.6 bits (148), Expect = 2.3e-09 Identity = 34/100 (34.00%), Postives = 51/100 (51.00%), Query Frame = 0
BLAST of Spg019840 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase ) HSP 1 Score: 51.2 bits (121), Expect = 3.2e-06 Identity = 49/189 (25.93%), Postives = 80/189 (42.33%), Query Frame = 0
BLAST of Spg019840 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase ) HSP 1 Score: 48.9 bits (115), Expect = 1.6e-05 Identity = 31/111 (27.93%), Postives = 51/111 (45.95%), Query Frame = 0
The following BLAST results are available for this feature:
Pages
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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