Spg019761 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019761
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold5: 33983278 .. 33983547 (-)
RNA-Seq ExpressionSpg019761
SyntenySpg019761
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGTTCGTCGAGATTCTTGACGCCAGCATCAGGATCGTCGCCAAATTTCATTCGCATTGCCTTCAGACTGGTCGGATGTACTACCATCCCCTGGCTAACTCCGATGACGTCCACCATTCCGACCACCAGGAGTTGCACCTAGGCAACGGGGCTCGCGGCGACGATGTGTCGTCTCATCGGATTGTTCGTTGCGGTGTCAAGGTCGCGACCGTCGCCTCCGTCGTTGGCGTTGAGAGTAACGAGTTCATTCTTTACTCTGTCTGA

mRNA sequence

ATGGGGAAGTTCGTCGAGATTCTTGACGCCAGCATCAGGATCGTCGCCAAATTTCATTCGCATTGCCTTCAGACTGGTCGGATGTACTACCATCCCCTGGCTAACTCCGATGACGTCCACCATTCCGACCACCAGGAGTTGCACCTAGGCAACGGGGCTCGCGGCGACGATGTGTCGTCTCATCGGATTGTTCGTTGCGGTGTCAAGGTCGCGACCGTCGCCTCCGTCGTTGGCGTTGAGAGTAACGAGTTCATTCTTTACTCTGTCTGA

Coding sequence (CDS)

ATGGGGAAGTTCGTCGAGATTCTTGACGCCAGCATCAGGATCGTCGCCAAATTTCATTCGCATTGCCTTCAGACTGGTCGGATGTACTACCATCCCCTGGCTAACTCCGATGACGTCCACCATTCCGACCACCAGGAGTTGCACCTAGGCAACGGGGCTCGCGGCGACGATGTGTCGTCTCATCGGATTGTTCGTTGCGGTGTCAAGGTCGCGACCGTCGCCTCCGTCGTTGGCGTTGAGAGTAACGAGTTCATTCTTTACTCTGTCTGA

Protein sequence

MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSSHRIVRCGVKVATVASVVGVESNEFILYSV
Homology
BLAST of Spg019761 vs. NCBI nr
Match: KAG7025639.1 (hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.6 bits (301), Expect = 7.1e-24
Identity = 67/115 (58.26%), Postives = 79/115 (68.70%), Query Frame = 0

Query: 1   MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQ-ELHLGNGARGDDVS 60
           MG+F+++LDAS+RIVA+FHSHC QTGRMYYHP ANSDD HHSD+Q EL LG+GARG DVS
Sbjct: 1   MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARGGDVS 60

Query: 61  SHRIVRCGVKV---ATVASVV----------------------GVESNEFILYSV 90
           S++IVRC  +    A VA+ V                      GVESNEFILYSV
Sbjct: 61  SNQIVRCDAEAEAEAAVAAAVLGGDVSSHQVIRCGAEAAVVGGGVESNEFILYSV 115

BLAST of Spg019761 vs. NCBI nr
Match: KAG6593287.1 (hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 65/115 (56.52%), Postives = 77/115 (66.96%), Query Frame = 0

Query: 1   MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQ-ELHLGNGARGDDVS 60
           MG+F+++LDAS+RIVA+FHSHC QTGRMYYHP ANSDD HHSD+Q EL LG+G RG DVS
Sbjct: 1   MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGTRGGDVS 60

Query: 61  SHRIVRCGVKV---ATVASVV----------------------GVESNEFILYSV 90
           S++IVRC  +    A VA+ V                      GV SNEFILYSV
Sbjct: 61  SNQIVRCDAEAEAEAAVAAAVLGGDVSSHQVIRCGAEAAVVGGGVVSNEFILYSV 115

BLAST of Spg019761 vs. NCBI nr
Match: KAA0058604.1 (hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 2.3e-22
Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGK VEILDA  RIVA+FHSHC QTGRMYYHP ANSDD HHS  +E  LG G    D +S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHS--EEFRLGGGGGDGDAAS 60

Query: 61 HRIVRCGVKVATVAS--VVGVESNEFILYSV 90
          H+IVRC V   T A+  VV VESNEFILYSV
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVESNEFILYSV 89

BLAST of Spg019761 vs. NCBI nr
Match: TYK10407.1 (hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 114.8 bits (286), Expect = 3.9e-22
Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGK VEILDA  RIVA+FHSHC QTGRMYYHP ANSDD HHS+   L  G G    D +S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60

Query: 61 HRIVRCGVKVATVAS--VVGVESNEFILYSV 90
          H+IVRC V   T A+  VV VESNEFILYSV
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVESNEFILYSV 91

BLAST of Spg019761 vs. NCBI nr
Match: KAG6575700.1 (hypothetical protein SDJN03_26339, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111.7 bits (278), Expect = 3.3e-21
Identity = 58/89 (65.17%), Postives = 64/89 (71.91%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGKFVEILDA +RIVA+FHSHC QT RMYYHP ANS++VHHSD QE  L  G    DVSS
Sbjct: 1  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEVHHSDRQEFRLSGG----DVSS 60

Query: 61 HRIVRCGVKVATVASVVGVESNEFILYSV 90
          H+IV C    A VA  V  ES +F LYSV
Sbjct: 61 HQIVPCSAAAAVVA--VSAESTDFFLYSV 83

BLAST of Spg019761 vs. ExPASy TrEMBL
Match: A0A5A7UTW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00730 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 62/91 (68.13%), Postives = 67/91 (73.63%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGK VEILDA  RIVA+FHSHC QTGRMYYHP ANSDD HHS  +E  LG G    D +S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHS--EEFRLGGGGGDGDAAS 60

Query: 61 HRIVRCGVKVATVAS--VVGVESNEFILYSV 90
          H+IVRC V   T A+  VV VESNEFILYSV
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVESNEFILYSV 89

BLAST of Spg019761 vs. ExPASy TrEMBL
Match: A0A5D3CEL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00500 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 61/91 (67.03%), Postives = 66/91 (72.53%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGK VEILDA  RIVA+FHSHC QTGRMYYHP ANSDD HHS+   L  G G    D +S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60

Query: 61 HRIVRCGVKVATVAS--VVGVESNEFILYSV 90
          H+IVRC V   T A+  VV VESNEFILYSV
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVESNEFILYSV 91

BLAST of Spg019761 vs. ExPASy TrEMBL
Match: A0A0A0K6I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426490 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20
Identity = 59/93 (63.44%), Postives = 65/93 (69.89%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGK VEILDA  RIVA+FHSHC QTGRMYYHP ANSDD HHS  +E  LG G    D +S
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHS--EEFRLGGGVGDGDAAS 60

Query: 61 HRIVRCGVKVATVAS----VVGVESNEFILYSV 90
          H+IV C  +    A+    VV VESNEFILYSV
Sbjct: 61 HQIVPCVAEPTAAAAAAVLVVTVESNEFILYSV 91

BLAST of Spg019761 vs. ExPASy TrEMBL
Match: A0A6J1JW88 (uncharacterized protein LOC111488441 OS=Cucurbita maxima OX=3661 GN=LOC111488441 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.4e-17
Identity = 49/74 (66.22%), Postives = 55/74 (74.32%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGKFVEILDA +RIVA+FHSHC QT RMYYHP ANS++ HHSD QE  L +G    DVSS
Sbjct: 1  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDLQEFRLSSG----DVSS 60

Query: 61 HRIVRCGVKVATVA 75
          H+IV C    A VA
Sbjct: 61 HQIVPCSAAAAVVA 70

BLAST of Spg019761 vs. ExPASy TrEMBL
Match: W9R4I1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004679 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.9e-15
Identity = 48/89 (53.93%), Postives = 60/89 (67.42%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGKFVEILD  +RIVA+FHSHC QT RMYYHP AN+D+ HH+++  L  G      DV  
Sbjct: 1  MGKFVEILDQGVRIVARFHSHCPQTSRMYYHPPANADNNHHNNNHFLFYGGDGGDGDV-- 60

Query: 61 HRIVRCGVKVATVASVVGVESNEFILYSV 90
           ++++CG K    A   G E+ EFILYSV
Sbjct: 61 -KVMKCGPK----AIGGGAENKEFILYSV 82

BLAST of Spg019761 vs. TAIR 10
Match: AT3G57450.1 (unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.2 bits (152), Expect = 1.3e-10
Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query: 1  MGKFVEILDASIRIVAKFHSHCLQTGRMYYHPLANSDDVHHSDHQELHLGNGARGDDVSS 60
          MGK+ E+LD  +RI A+FHSHC QT R+YYHP +++   HH   ++L  G G  G   +S
Sbjct: 1  MGKYTEMLDVGVRIAARFHSHCPQTARLYYHPPSDNHH-HHGGVKDLIGGGGVLGSGQNS 60

Query: 61 HRIV-----------RCGVKVATVASVVGVESNEFILYSV 90
            +V            CG+K    +S V  ++ + +L+SV
Sbjct: 61 TGLVGGLGTGTGTTGGCGIK----SSQVYDDARDLLLFSV 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025639.17.1e-2458.26hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6593287.11.3e-2256.52hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0058604.12.3e-2268.13hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa][more]
TYK10407.13.9e-2267.03hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa][more]
KAG6575700.13.3e-2165.17hypothetical protein SDJN03_26339, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UTW31.1e-2268.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CEL31.9e-2267.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K6I81.0e-2063.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426490 PE=4 SV=1[more]
A0A6J1JW882.4e-1766.22uncharacterized protein LOC111488441 OS=Cucurbita maxima OX=3661 GN=LOC111488441... [more]
W9R4I12.9e-1553.93Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004679 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G57450.11.3e-1037.00unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33983:SF10SUBFAMILY NOT NAMEDcoord: 1..89
NoneNo IPR availablePANTHERPTHR33983OS07G0185900 PROTEINcoord: 1..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019761.1Spg019761.1mRNA