Spg019750 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg019750
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Girdin-like
Location	scaffold5: 36820059 .. 36821501 (+)
RNA-Seq Expression	Spg019750
Synteny	Spg019750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGACTTAACCCTCATGATCGAGGAATACCAAGCATTAATCTCCATACCGTCCAACGCTGGGAGCAAAGATTATACGTGGGATTGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGGAAATGTTCGTGCATCCGACATAAATAAGCAGATGAAGACCAAAGGAGAGAGAAACTGTATTCCTATCGATTATTTGATAGGCCTCACACGTGCGAGCCTGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGCATATACGACATGGTTATTTTCCCGAGGGTCAAAGGGTATGTAGAGGAAGAAGTCATTAAACTCTTCGTTCGAATAGAGCGTGGGATAAATCCAGTTGTCCCGATTTTAGCATAAACTTTTAGATCATTGAGTCATTGCAGAGCCCAAGGCAGAGGGGTTTTTAGCTGTGCGTCAATGCTCTTTATTTGGCTTTCTAGTCATTTGAAGTATCCACGCGAGTTTAATTATCCTCCGATCAAGTTTAGCAGTTCGTGGAATAGTTCAAGGAACACGACTAAGGCTTTCATTAGTGCATGCTGGAGCCCAGACGTTCCCAATGTCAATGCGTGGAGGTCTTTTCTGTGCCACATAACATTAGAAGAAGTGATCTGAAGGGCGCCATGGTTACCTTCAAGGCCTATAACATATCGATGTGGACAATTACCTTTCGTCCCATTGTTAGGGCCCTGGAGAGGTATCGCTTACACTCCATTACTAATGCTACGTCAAGTATGGTTGAAGCAATTTGTCCCAACTATCCATGGTTTGGAAGACTGGGAAGTCTCCTATGATTCTGACGCGAAAAGTGCCCAGATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACGACACTACGAGGGCACAACGACGCCATATGAGAATTGGAGAGCAGCTCGAAATGGATTCGAGGTTGTCATTCCGCCAGAATCAATAGCTTCAAGTGATACTTTGAAGATGGATCAAGCTCACTCGGAGAGAAATTTGGAACGTTTAGAGGAAAGAAATCTTGTCCTGGTAAGAGAAAATGAAGAATTAAAAGACGAGGTCAAACGATGGATTGAGCATGCTACCGGTATTCAGAAGCAGCAAGACGAGGCCAAACGACAGTTGAAAGGACAAGAAAAAGATAAAAGCTCTTTGAGTGTCGAGGCGGTCCAGATGAGAAAAAGAAATAAGAAGCTACAGAGGGAAATTGAACTCTTGCAAGGTGAGGCAGAAGCTCAAAAGGCTCACATTCGAGAGTTGAAGCGGGAAATAGAAAGACTCAACGACGTTATCGAAGGTTTCCAAGGTACAATGAATGAGCAAGCCACGACATCCCAGGAAGTCATTGCATCCTTACAAAAGGAAACAGAGGCATTGCAGAAACTGACAGAAGAATACAGGAGTCAACTCACATAG

mRNA sequence

ATGTTCGACTTAACCCTCATGATCGAGGAATACCAAGCATTAATCTCCATACCGTCCAACGCTGGGAGCAAAGATTATACGTGGGATTGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGGAAATGTTCGTGCATCCGACATAAATAAGCAGATGAAGACCAAAGGAGAGAGAAACTGTATTCCTATCGATTATTTGATAGGCCTCACACGTGCGAGCCTGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGCATATACGACATGGTTATTTTCCCGAGGGTCAAAGGTATCCACGCGAGTTTAATTATCCTCCGATCAAGTTTAGCAGTTCGTGGAATAGTTCAAGGAACACGACTAAGGCTTTCATTAGTGCATGCTGGAGCCCAGACGTTCCCAATGTCAATGCGTGGAGGGCCCTGGAGAGGTATCGCTTACACTCCATTACTAATGCTACGTCAAGTATGGTTGAAGCAATTTGTCCCAACTATCCATGGTTTGGAAGACTGGGAAGTCTCCTATGATTCTGACGCGAAAAGTGCCCAGATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACGACACTACGAGGGCACAACGACGCCATATGAGAATTGGAGAGCAGCTCGAAATGGATTCGAGGTTGTCATTCCGCCAGAATCAATAGCTTCAAGTGATACTTTGAAGATGGATCAAGCTCACTCGGAGAGAAATTTGGAACGTTTAGAGGAAAGAAATCTTGTCCTGGTAAGAGAAAATGAAGAATTAAAAGACGAGGTCAAACGATGGATTGAGCATGCTACCGGTATTCAGAAGCAGCAAGACGAGGCCAAACGACAGTTGAAAGGACAAGAAAAAGATAAAAGCTCTTTGAGTGTCGAGGCGGTCCAGATGAGAAAAAGAAATAAGAAGCTACAGAGGGAAATTGAACTCTTGCAAGGTGAGGCAGAAGCTCAAAAGGCTCACATTCGAGAGTTGAAGCGGGAAATAGAAAGACTCAACGACGTTATCGAAGGTTTCCAAGGTACAATGAATGAGCAAGCCACGACATCCCAGGAAGTCATTGCATCCTTACAAAAGGAAACAGAGGCATTGCAGAAACTGACAGAAGAATACAGGAGTCAACTCACATAG

Coding sequence (CDS)

ATGTTCGACTTAACCCTCATGATCGAGGAATACCAAGCATTAATCTCCATACCGTCCAACGCTGGGAGCAAAGATTATACGTGGGATTGGAGGTTGACTTTGCAGAGATCGTTATCTAAGTTTTTGGGAAATGTTCGTGCATCCGACATAAATAAGCAGATGAAGACCAAAGGAGAGAGAAACTGTATTCCTATCGATTATTTGATAGGCCTCACACGTGCGAGCCTGCCTGAGAGAAAAGGTCTATCTCTTTTGGCAATGTGCATATACGACATGGTTATTTTCCCGAGGGTCAAAGGTATCCACGCGAGTTTAATTATCCTCCGATCAAGTTTAGCAGTTCGTGGAATAGTTCAAGGAACACGACTAAGGCTTTCATTAGTGCATGCTGGAGCCCAGACGTTCCCAATGTCAATGCGTGGAGGGCCCTGGAGAGGTATCGCTTACACTCCATTACTAATGCTACGTCAAGTATGGTTGAAGCAATTTGTCCCAACTATCCATGGTTTGGAAGACTGGGAAGTCTCCTATGATTCTGACGCGAAAAGTGCCCAGATTCATCAGGCAGTGGAGGCATGGAAAGTAGTGAGAAAGATGAAAAACGCACGACACTACGAGGGCACAACGACGCCATATGAGAATTGGAGAGCAGCTCGAAATGGATTCGAGGTTGTCATTCCGCCAGAATCAATAGCTTCAAGTGATACTTTGAAGATGGATCAAGCTCACTCGGAGAGAAATTTGGAACGTTTAGAGGAAAGAAATCTTGTCCTGGTAAGAGAAAATGAAGAATTAAAAGACGAGGTCAAACGATGGATTGAGCATGCTACCGGTATTCAGAAGCAGCAAGACGAGGCCAAACGACAGTTGAAAGGACAAGAAAAAGATAAAAGCTCTTTGAGTGTCGAGGCGGTCCAGATGAGAAAAAGAAATAAGAAGCTACAGAGGGAAATTGAACTCTTGCAAGGTGAGGCAGAAGCTCAAAAGGCTCACATTCGAGAGTTGAAGCGGGAAATAGAAAGACTCAACGACGTTATCGAAGGTTTCCAAGGTACAATGAATGAGCAAGCCACGACATCCCAGGAAGTCATTGCATCCTTACAAAAGGAAACAGAGGCATTGCAGAAACTGACAGAAGAATACAGGAGTCAACTCACATAG

Protein sequence

MFDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERNCIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRGIVQGTRLRLSLVHAGAQTFPMSMRGGPWRGIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARHYEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHSERNLERLEERNLVLVRENEELKDEVKRWIEHATGIQKQQDEAKRQLKGQEKDKSSLSVEAVQMRKRNKKLQREIELLQGEAEAQKAHIRELKREIERLNDVIEGFQGTMNEQATTSQEVIASLQKETEALQKLTEEYRSQLT

Homology

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BLAST of Spg019750 vs. NCBI nr
Match: KAA0032013.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 290.4 bits (742), Expect = 2.2e-74
Identity = 174/390 (44.62%), Postives = 235/390 (60.26%), Query Frame = 0


Query: 1   MFDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGER 60
           MFDLT  IEEY+ALIS+P + G+K Y +D +LT++RSLSKF+G++ AS++ KQ+K K  R
Sbjct: 1   MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60

Query: 61  NCIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRG---- 120
           NCIPI+YLI L R  L  +KGLSL+A+CIY  +IFPR+KG     ++       RG    
Sbjct: 61  NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120

Query: 121 IVQGTRLRLSLVHAGAQTF-------------------------------PMSMRGGPWR 180
           I   T    SL H   Q F                                + + GG   
Sbjct: 121 IPIMTETFRSLNHCRIQVFQPFNDNRCNLESPLDAHKSFDTPLWKIGYYPTIRLMGG--- 180

Query: 181 GIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARHY 240
           GIAY+PLL+LRQ W KQF P + GLEDWE SY+S+  + +IH+AVEAWK V+KMK+ RH 
Sbjct: 181 GIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRHC 240

Query: 241 EGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHSERNLERLEERNLVLVRENEEL 300
           EGTT  Y+NWRA+RNG  +    ES+  +  LK      E+ L+RL E N V+  ENE+L
Sbjct: 241 EGTTEQYDNWRASRNGITINAMSESLVPNIELK-KYHDKEKELKRLREMNCVMATENEKL 300

Query: 301 KDEVKRWIEHATGIQKQQDEAKRQLKGQEKDKSSLSVEAVQMRKRNKKLQREIELLQGEA 356
           ++EVK+W++ A   Q+  DEAKR+L   EK+  SL+ EA+Q+RK+NK+L R I  L  E 
Sbjct: 301 REEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEI 360

[Close]

BLAST of Spg019750 vs. NCBI nr
Match: TYK16834.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 2.0e-67
Identity = 176/451 (39.02%), Postives = 242/451 (53.66%), Query Frame = 0


Query: 1   MFDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGER 60
           MFDLT  IEEY+ALIS+P + G+K Y +D +LT++RSLSKF+G++ AS++ KQ+K K  R
Sbjct: 1   MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60

Query: 61  NCIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRGI--- 120
           NCIPI+YLI L R  L  +KGLSL+A+CIY  +IFPR+KG     ++       RG+   
Sbjct: 61  NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120

Query: 121 ---------------VQG----------------TRLR---------------------- 180
                          +QG                + LR                      
Sbjct: 121 IPIMTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNT 180

Query: 181 -------------------------LSLVHA-----GAQTFPMSMRGGP---------W- 240
                                    L+ + A        T P++ R G          W 
Sbjct: 181 IREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWG 240

Query: 241 RGIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARH 300
            GIAY+PLL+LRQ W KQF P + GLEDWE SY+S+  + +IH+AVEAWK V+KMK+ RH
Sbjct: 241 GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRH 300

Query: 301 YEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHSERNLERLEERNLVLVRENEE 356
            EGTT  Y+NWRA+RNG  +    ES+  +  LK      E+ L+RL E N V+  ENE+
Sbjct: 301 CEGTTEQYDNWRASRNGITINAMSESLVPNIELK-KYHDKEKELKRLREMNCVMATENEK 360

[Close]

BLAST of Spg019750 vs. NCBI nr
Match: KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 242.7 bits (618), Expect = 5.4e-60
Identity = 162/447 (36.24%), Postives = 235/447 (52.57%), Query Frame = 0


Query: 2   FDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERN 61
           FDLT  IEEYQALIS+P + G+K Y +  +LTLQRSLSKF+G++ AS++ KQMKTK  RN
Sbjct: 116 FDLTPTIEEYQALISLPVDRGNKLYIYHRKLTLQRSLSKFMGDIHASELKKQMKTKEGRN 175

Query: 62  CIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRGI---- 121
           CIPI+YLI L R  L  +KGLSL+A+CIY  VIFPR+KG     ++       RG+    
Sbjct: 176 CIPINYLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVI 235

Query: 122 -VQGTRLRLSLVHAGAQ--------------------------TFPMSMRGGPWR----- 181
            +     R SL H   Q                           +P      PW      
Sbjct: 236 PIMAETFR-SLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNT 295

Query: 182 ---------------------GIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSA 241
                                GIAY+PLL+LRQ W KQF P + GLEDWE SY+S+  + 
Sbjct: 296 IREFNSAHWDPKDPEFGAYGGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIAND 355

Query: 242 QIHQAVEAWKVVRKMKNARHYEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHS 301
           +IH+AVEAWK V+KMK+ RH EGTT  Y+NWRA+RNG  +    ES+  +  LK      
Sbjct: 356 KIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRNGITMNPMSESLVPNIELK-KYHDK 415

Query: 302 ERNLERLEERNLVLVRENEELKDEVKRWIEHATGIQKQQDEAKRQ-------LKGQEKDK 361
           E+ L+RL E N VL  ENE+L++EVK+W++ A    +  DEAKR+       ++  +   
Sbjct: 416 EKELKRLREMNCVLATENEKLREEVKKWVQQAVNTPRDLDEAKRKRLETAMGIEVLQHSI 475

Query: 362 SSLSVEAVQMRKRNKKLQREIELLQGE----AEAQKAHIRELKREIERLNDVIEGFQGTM 378
                + ++   +N  LQ+ +   + +     +A++    +  + IE+  ++   F    
Sbjct: 476 EEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLIEKYQEMSIDFMMWK 535

[Close]

BLAST of Spg019750 vs. NCBI nr
Match: KAA0066094.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-51
Identity = 134/353 (37.96%), Postives = 201/353 (56.94%), Query Frame = 0


Query: 3   DLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERNC 62
           DL   IEEYQA++S+P       Y ++ + T +R+LSKFL  V A+ I K +K KG    
Sbjct: 114 DLLPTIEEYQAMLSMPGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKVKGGEEN 173

Query: 63  IPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKG-IHASLIILRSSLAVRGIVQGT 122
           +P DYLI +T+  + E KGL+LLA+CIY  VIFP+ +G +    +I R            
Sbjct: 174 VPFDYLIKMTQTYVDEDKGLTLLALCIYGAVIFPKAEGYVDGKAVIYRC----------- 233

Query: 123 RLRLSLVHAGAQTFPMSMRGGPWRGIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDA 182
                       + P+    GPW G+ YTPLL+L QVWLKQF+P  H L++++ SYD + 
Sbjct: 234 --------GDFHSVPLL---GPWGGVNYTPLLVLHQVWLKQFIPPTHNLQEFDFSYDPED 293

Query: 183 KSAQIHQAVEAWKVVRKMKNARHYEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQ 242
              +  QAV AWK +RK+K+  HYEG T+ YE W+A R    + I  E +        +Q
Sbjct: 294 CQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKKTSFEQ 353

Query: 243 AHS--ERNLERLEERNLVLVRENEELKDEVKRWIEHATGIQKQQDEAKRQLKGQ---EKD 302
            +   E+++E LEE+N +L +ENE+L+ E  +W++HAT +Q + ++ K  LK Q   EKD
Sbjct: 354 PNQWIEKSIE-LEEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKD 413

Query: 303 KSSLSVEAVQMRKRNKKLQREIELLQGEAEAQKAHIRELKRE----IERLNDV 346
             +L  E  +M K N+ L+ E   LQ    +Q  +I++L+      +ER+ND+
Sbjct: 414 LETLDKEMRRMNKANRSLKNEKTTLQATMGSQDEYIKDLENGKEYFLERVNDL 443

[Close]

BLAST of Spg019750 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa])

HSP 1 Score: 184.1 bits (466), Expect = 2.3e-42
Identity = 142/467 (30.41%), Postives = 222/467 (47.54%), Query Frame = 0


Query: 8   IEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERNCIPIDY 67
           IEEYQA++S+P       Y ++ + T +R+LSKFL  V A++I K +K KG    +P DY
Sbjct: 88  IEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKVKGGEENVPFDY 147

Query: 68  LIGLTRASLPERKGLSLLAMCIYDMVIFPRVKG--------------------------- 127
           LI +T+  + E KGL+LLA+CIY  VIFP+ +G                           
Sbjct: 148 LIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAET 207

Query: 128 -------------------------IHASL-----------------IILRSSLAVRGIV 187
                                    IH+ +                  ++R++++  G+ 
Sbjct: 208 FRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTISEFGMA 267

Query: 188 QG--------------TRLRLSLVHAGAQTFPMSM------------RGGPWRGIAYTPL 247
                            +L    V   AQ  P+                GPW G+ YTPL
Sbjct: 268 VWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPL 327

Query: 248 LMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARHYEGTTTPY 307
           L+LRQVWLKQF+P  H L++ + SYD +    +  QAV AWK +RK+K+  HYEG T+ Y
Sbjct: 328 LVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGY 387

Query: 308 ENWRAARNGFEVVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVLVRENEELKDEVK 367
           E W+A R    + I  E + S      +Q +   E+++E LEE+N +L +ENE+L+ E  
Sbjct: 388 EAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIE-LEEKNRLLEQENEKLRKETS 447

Query: 368 RWIEHATGIQKQQDEAKRQLKGQ---EKDKSSLSVEAVQMRKRNKKLQREIELLQGEAEA 375
           +W++HAT +Q + ++ K  LK Q   EKD  +L  E  +M K N+ L+ E   LQ     
Sbjct: 448 QWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRSLKNEKTTLQATV-- 507

[Close]

BLAST of Spg019750 vs. ExPASy TrEMBL
Match: A0A5A7SNY0 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001110 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 174/390 (44.62%), Postives = 235/390 (60.26%), Query Frame = 0


Query: 1   MFDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGER 60
           MFDLT  IEEY+ALIS+P + G+K Y +D +LT++RSLSKF+G++ AS++ KQ+K K  R
Sbjct: 1   MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60

Query: 61  NCIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRG---- 120
           NCIPI+YLI L R  L  +KGLSL+A+CIY  +IFPR+KG     ++       RG    
Sbjct: 61  NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120

Query: 121 IVQGTRLRLSLVHAGAQTF-------------------------------PMSMRGGPWR 180
           I   T    SL H   Q F                                + + GG   
Sbjct: 121 IPIMTETFRSLNHCRIQVFQPFNDNRCNLESPLDAHKSFDTPLWKIGYYPTIRLMGG--- 180

Query: 181 GIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARHY 240
           GIAY+PLL+LRQ W KQF P + GLEDWE SY+S+  + +IH+AVEAWK V+KMK+ RH 
Sbjct: 181 GIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRHC 240

Query: 241 EGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHSERNLERLEERNLVLVRENEEL 300
           EGTT  Y+NWRA+RNG  +    ES+  +  LK      E+ L+RL E N V+  ENE+L
Sbjct: 241 EGTTEQYDNWRASRNGITINAMSESLVPNIELK-KYHDKEKELKRLREMNCVMATENEKL 300

Query: 301 KDEVKRWIEHATGIQKQQDEAKRQLKGQEKDKSSLSVEAVQMRKRNKKLQREIELLQGEA 356
           ++EVK+W++ A   Q+  DEAKR+L   EK+  SL+ EA+Q+RK+NK+L R I  L  E 
Sbjct: 301 REEVKKWVQQAVNTQRDLDEAKRKLLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEI 360

[Close]

BLAST of Spg019750 vs. ExPASy TrEMBL
Match: A0A5D3D0S2 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001090 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 9.9e-68
Identity = 176/451 (39.02%), Postives = 242/451 (53.66%), Query Frame = 0


Query: 1   MFDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGER 60
           MFDLT  IEEY+ALIS+P + G+K Y +D +LT++RSLSKF+G++ AS++ KQ+K K  R
Sbjct: 1   MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60

Query: 61  NCIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRGI--- 120
           NCIPI+YLI L R  L  +KGLSL+A+CIY  +IFPR+KG     ++       RG+   
Sbjct: 61  NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120

Query: 121 ---------------VQG----------------TRLR---------------------- 180
                          +QG                + LR                      
Sbjct: 121 IPIMTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNT 180

Query: 181 -------------------------LSLVHA-----GAQTFPMSMRGGP---------W- 240
                                    L+ + A        T P++ R G          W 
Sbjct: 181 IREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWG 240

Query: 241 RGIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARH 300
            GIAY+PLL+LRQ W KQF P + GLEDWE SY+S+  + +IH+AVEAWK V+KMK+ RH
Sbjct: 241 GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRH 300

Query: 301 YEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHSERNLERLEERNLVLVRENEE 356
            EGTT  Y+NWRA+RNG  +    ES+  +  LK      E+ L+RL E N V+  ENE+
Sbjct: 301 CEGTTEQYDNWRASRNGITINAMSESLVPNIELK-KYHDKEKELKRLREMNCVMATENEK 360

[Close]

BLAST of Spg019750 vs. ExPASy TrEMBL
Match: A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.6e-60
Identity = 162/447 (36.24%), Postives = 235/447 (52.57%), Query Frame = 0


Query: 2   FDLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERN 61
           FDLT  IEEYQALIS+P + G+K Y +  +LTLQRSLSKF+G++ AS++ KQMKTK  RN
Sbjct: 116 FDLTPTIEEYQALISLPVDRGNKLYIYHRKLTLQRSLSKFMGDIHASELKKQMKTKEGRN 175

Query: 62  CIPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKGIHASLIILRSSLAVRGI---- 121
           CIPI+YLI L R  L  +KGLSL+A+CIY  VIFPR+KG     ++       RG+    
Sbjct: 176 CIPINYLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVI 235

Query: 122 -VQGTRLRLSLVHAGAQ--------------------------TFPMSMRGGPWR----- 181
            +     R SL H   Q                           +P      PW      
Sbjct: 236 PIMAETFR-SLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNT 295

Query: 182 ---------------------GIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSA 241
                                GIAY+PLL+LRQ W KQF P + GLEDWE SY+S+  + 
Sbjct: 296 IREFNSAHWDPKDPEFGAYGGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIAND 355

Query: 242 QIHQAVEAWKVVRKMKNARHYEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQAHS 301
           +IH+AVEAWK V+KMK+ RH EGTT  Y+NWRA+RNG  +    ES+  +  LK      
Sbjct: 356 KIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRNGITMNPMSESLVPNIELK-KYHDK 415

Query: 302 ERNLERLEERNLVLVRENEELKDEVKRWIEHATGIQKQQDEAKRQ-------LKGQEKDK 361
           E+ L+RL E N VL  ENE+L++EVK+W++ A    +  DEAKR+       ++  +   
Sbjct: 416 EKELKRLREMNCVLATENEKLREEVKKWVQQAVNTPRDLDEAKRKRLETAMGIEVLQHSI 475

Query: 362 SSLSVEAVQMRKRNKKLQREIELLQGE----AEAQKAHIRELKREIERLNDVIEGFQGTM 378
                + ++   +N  LQ+ +   + +     +A++    +  + IE+  ++   F    
Sbjct: 476 EEYKSQLIEAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLIEKYQEMSIDFMMWK 535

[Close]

BLAST of Spg019750 vs. ExPASy TrEMBL
Match: A0A5A7VFL0 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 5.8e-52
Identity = 134/353 (37.96%), Postives = 201/353 (56.94%), Query Frame = 0


Query: 3   DLTLMIEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERNC 62
           DL   IEEYQA++S+P       Y ++ + T +R+LSKFL  V A+ I K +K KG    
Sbjct: 114 DLLPTIEEYQAMLSMPGKEREIVYFFNPKKTTKRTLSKFLETVHAAKIQKYIKVKGGEEN 173

Query: 63  IPIDYLIGLTRASLPERKGLSLLAMCIYDMVIFPRVKG-IHASLIILRSSLAVRGIVQGT 122
           +P DYLI +T+  + E KGL+LLA+CIY  VIFP+ +G +    +I R            
Sbjct: 174 VPFDYLIKMTQTYVDEDKGLTLLALCIYGAVIFPKAEGYVDGKAVIYRC----------- 233

Query: 123 RLRLSLVHAGAQTFPMSMRGGPWRGIAYTPLLMLRQVWLKQFVPTIHGLEDWEVSYDSDA 182
                       + P+    GPW G+ YTPLL+L QVWLKQF+P  H L++++ SYD + 
Sbjct: 234 --------GDFHSVPLL---GPWGGVNYTPLLVLHQVWLKQFIPPTHNLQEFDFSYDPED 293

Query: 183 KSAQIHQAVEAWKVVRKMKNARHYEGTTTPYENWRAARNGFEVVIPPESIASSDTLKMDQ 242
              +  QAV AWK +RK+K+  HYEG T+ YE W+A R    + I  E +        +Q
Sbjct: 294 CQGKKRQAVCAWKSIRKIKDKGHYEGVTSGYEAWQANRRKNIIDISREVVERGKKTSFEQ 353

Query: 243 AHS--ERNLERLEERNLVLVRENEELKDEVKRWIEHATGIQKQQDEAKRQLKGQ---EKD 302
            +   E+++E LEE+N +L +ENE+L+ E  +W++HAT +Q + ++ K  LK Q   EKD
Sbjct: 354 PNQWIEKSIE-LEEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKD 413

Query: 303 KSSLSVEAVQMRKRNKKLQREIELLQGEAEAQKAHIRELKRE----IERLNDV 346
             +L  E  +M K N+ L+ E   LQ    +Q  +I++L+      +ER+ND+
Sbjct: 414 LETLDKEMRRMNKANRSLKNEKTTLQATMGSQDEYIKDLENGKEYFLERVNDL 443

[Close]

BLAST of Spg019750 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.1e-42
Identity = 142/467 (30.41%), Postives = 222/467 (47.54%), Query Frame = 0


Query: 8   IEEYQALISIPSNAGSKDYTWDWRLTLQRSLSKFLGNVRASDINKQMKTKGERNCIPIDY 67
           IEEYQA++S+P       Y ++ + T +R+LSKFL  V A++I K +K KG    +P DY
Sbjct: 88  IEEYQAMLSMPEKEREIVYFFNPKQTTKRTLSKFLETVHATEIQKYIKVKGGEENVPFDY 147

Query: 68  LIGLTRASLPERKGLSLLAMCIYDMVIFPRVKG--------------------------- 127
           LI +T+  + E KGL+LLA+CIY  VIFP+ +G                           
Sbjct: 148 LIKMTQTYIDEDKGLTLLALCIYGAVIFPKAEGYVDRKVIKLFFQMERGVNPIIPILAET 207

Query: 128 -------------------------IHASL-----------------IILRSSLAVRGIV 187
                                    IH+ +                  ++R++++  G+ 
Sbjct: 208 FRSLNYCRNKGEGKLNCCVPLLYIWIHSHIKFPAEFRCPRLDFSSPWNLMRNTISEFGMA 267

Query: 188 QG--------------TRLRLSLVHAGAQTFPMSM------------RGGPWRGIAYTPL 247
                            +L    V   AQ  P+                GPW G+ YTPL
Sbjct: 268 VWDPTYPRKEAWLSFFAKLTSENVIWKAQWMPLKAVIYRCGDFHSVPLLGPWGGVNYTPL 327

Query: 248 LMLRQVWLKQFVPTIHGLEDWEVSYDSDAKSAQIHQAVEAWKVVRKMKNARHYEGTTTPY 307
           L+LRQVWLKQF+P  H L++ + SYD +    +  QAV AWK +RK+K+  HYEG T+ Y
Sbjct: 328 LVLRQVWLKQFIPPTHNLQESDFSYDPEDCQGKKRQAVCAWKSIRKIKDKGHYEGVTSGY 387

Query: 308 ENWRAARNGFEVVIPPESIASSDTLKMDQAHS--ERNLERLEERNLVLVRENEELKDEVK 367
           E W+A R    + I  E + S      +Q +   E+++E LEE+N +L +ENE+L+ E  
Sbjct: 388 EAWQANRRKNIIDISREVVESGKETSFEQPNQWIEKSIE-LEEKNRLLEQENEKLRKETS 447

Query: 368 RWIEHATGIQKQQDEAKRQLKGQ---EKDKSSLSVEAVQMRKRNKKLQREIELLQGEAEA 375
           +W++HAT +Q + ++ K  LK Q   EKD  +L  E  +M K N+ L+ E   LQ     
Sbjct: 448 QWMDHATYLQNELEKTKSFLKNQDKLEKDLETLDEEMRRMNKANRSLKNEKTTLQATV-- 507

The following BLAST results are available for this feature:

BLAST of Spg019750 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032013.1	2.2e-74	44.62	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
TYK16834.1	2.0e-67	39.02	glial fibrillary acidic protein-like [Cucumis melo var. makuwa]	[more]
KAA0033221.1	5.4e-60	36.24	uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa]	[more]
KAA0066094.1	1.2e-51	37.96	girdin-like [Cucumis melo var. makuwa]	[more]
KAA0036941.1	2.3e-42	30.41	girdin-like [Cucumis melo var. makuwa]	[more]

BLAST of Spg019750 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg019750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SNY0	1.1e-74	44.62	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3D0S2	9.9e-68	39.02	Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7SUT0	2.6e-60	36.24	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84...	[more]
A0A5A7VFL0	5.8e-52	37.96	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold21G00850 PE=...	[more]
A0A5A7T5S7	1.1e-42	30.41	Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=...	[more]

BLAST of Spg019750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 234..352
None	No IPR available	COILS	Coil	Coil	coord: 360..386
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..301
None	No IPR available	PANTHER	PTHR48200	PROTEIN, PUTATIVE-RELATED	coord: 4..99 coord: 142..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg019750.1	Spg019750.1	mRNA