Spg019738 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019738
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPectin lyase-like superfamily protein
Locationscaffold5: 29457043 .. 29470328 (-)
RNA-Seq ExpressionSpg019738
SyntenySpg019738
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATCTATGTCCACGTCCAGTTTCCACATCAGAATATCATCATTCTGGGAGGGAGAAAGGGTGTCCAGCAACCTCACTAATAACTCTCTATCAAACAACCCTTTTCTCAAGCAAAGGTCTCAAGAAGTCCCTTTCCACAACTCACTATCACTCTTCTCTTTAGCCATCGAGATTCTTAAAATGTTGGGAAACATAGATTTAAGGGGTTGATCAGCCCCCACCCAACCGTCATTAAAAAAAAAAACACCTTATCCCCCAACCAAATTTAAATTTGCAATTCTCCCAAAAAAAAAAAAAAACTTGGTGATGTCCCTCCAAGGACTATACAGCCCTTTTCACTTTTTGTGAGCTTTGTTATAGGTAATTTTGGACCACACCGACGAACAAGGAGCTGACGAGGACATTCGGGCGAAAGTAGGAGCAGAAAACCGACCCAGAGGAAGATCGGACCAAAGGGTCGGGCCAACATGGCCTGACCCATATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGCGCCAACGGGCCGAGCTCGTTCACCTCCTTTCGGCCACTGATGCCCCGGATCGCCCCGGTTCCGCCTGGTTCGTCCGGAAACACCTTCGAATTCCTAAAAACCCTAGGAGGAAAAACAGGTATAAAAACCTATCTTCATCACTGAAGAAGGGTTCGGAAAAAAAAAACTCTATTCTCAACTTCTTCCATTACTCTCTAGCTTCTCCTTGGTTTTCTGACTTAAGCATCGGAGACGGTGTGGCCTACACCACACCGGTGTGCAGCGGTTCTTGTTGGTCTTGTAGGTCACGTCTTCCCCAGTTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCAGGTGAGTCCTCTGTCTGGATTTTGGCATCAACAGTTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGATCGCGCATCGGTGGTGGTTTGTAGGATGGATCGAGTTCAGAAACCAGAAGGAAACCTTGGGTATGAGCAGAAAGCGACGAGCCAGACTGGGGCCGACCTCAGTAGGGAAAAGGCCGACCCTAACTTCGAAGATTGTGGTAAGGTTCCGCGTGTCAATGATGCTGTTGGACCTGACCCAAGAGGGCATCCAGCAGAGGAACTGGAATCTGTGTCGCTAACATCTGAGGAAAGGAGGGTGAACATCGACACCAAACTGGGGGCTGAGCAGAAGGACAAACTGATTGGTTTCTTGAGAGCTAATGCAGATTTGTTTGCGTGGTCACACGAAGATATGCCGGGAATTGACCCGGAAGTGATGGTTCACCAGTTAAACGTGGACAGGGATTTCAAGCCGGTAAAGCAGAAATGAAGGGCATTTAATTCGGAGAGGAATGAGGTTATTGCTAGTCAAGTGGATTGCTTAAAGCGGGGTTCATCCGAGAAGTTCATTATCCCCAATGGTTGTCTAATGTGGTACTGGTAAAGAAGGCTAACGGAAAGTGGCGGATGTGCATCGACTTCACCGACCTGAATAAGGCATGCCCAAAAGACAGTTATCCTTTGCCCATGATCGACCAGTTGGTTGATGCAACATCAGGGCACGAGATGCTGAGTTTTATGGATGCATACTCAGGGTACAACCAGATTAGAATGCACGAGACCGATCAGGAAAAAACGTCATTTATCACCAGTCGAGGGTTGTACTGTTACAAGGTCATGCCGTTCGGTTTGAAGAACGCCGGGGCAACATACCAACGGATGGTGAACCGCATGTTCGCTCCTTTACTGGGAAAGAACATGGAGGTATACGTGGATGATATGCTGGTGAACAGCTTGAAGTCTCAATGCCATGAGTCCGACCTTAAAGAGGCTTTCTAGATACTCCGGAAGTATCGAATGAAACTAAACCCGAGTAAGTGCGCTTTTGGGGTGACGTCGGGAAAATTCCTAGGGTTCATGGTACATCAGAGGGGGATAGAGGCAAACCCAGACAAGATCAGAGCAATCATGCAAATGTCCTCCTCGTCCAATCTTAAGCAGCTTCAAAGCTTGAACGGGAGGATTGCCGCCTTGAACAGGTTTGTTAGTAGATCAACTGACAGGTGCTTACCCTTCTTTAAAATTTTGAGATAGGAATCACGTTTCGAATGGACTGAAGAGTATGAAAAAGCTTTTCGAGAATTGAAAGACCATCTGAGTTCAGCCCCGCTCCTAGCCAAGTCGCTCCCAGGCTACGAGCTGCTGCTCTACCTAGCAGTGTCGGATACGGCCGTGAGTTCCGCATTGATCAAAGAAGAAGGAAAACTTCAGCGACCTGTGTATTATACCAGTAAATCTATGGTCGGGGCAGAGACAAGATATCCCCAAGTGGAGAAGCTCGCCCTAGCCTTGATCACGTCAGCTAGGAGACTACGGCCATATTTTCAGGCCCATAAGGTAACAGTTTTGACAAATTTCCTTTGAAATAGGTGTTACAGAAGCCAGATGCCTCGGGCCGCCTCATGAAGTGGGCAGTGGAGCTGAGTGAATATGACATCCACTACAAACCTCGAACTGCAATAAAGGGGCAAGCCGTGGCAAATTTTGTGGTCGAATTAACATCTGCAGAGGCTGAGGCCGACCCTCAGAGGCCCGAGGCCGAGCAGAACAGGTCAAGCGTAGTGGTCAGTATGCTGAGTGTAGGGGAGGTCAAACAGACTTGGACACTCTTTGTAGACGGGTCTTCTAACACCAAGGGCTGTGGAGCAGGAATTTTGCTAGAATCCCCTGATGGAGGGAGATTTGAGTATGCCCTGAGATTTAACTTCAAGGCCTCAAATAATAAGGTTGAATACGAGGCACTCCTTGCAGGATTGAGGTTGGCAAGGGAGATCGGAGTCTCCAACCTCCTGGTTTAGAGCGATTCATAGCTAATCGTGAAGCAAGTGTTGGCAGAATATCAGACTAGGGAACAGAGAATGAGTAAGTACTTATCCAAGGCCAGGAAGCTACTGTCCCAATTTGAGAAGTGGGAGATCAAGCAAATCCCAAGGTCTCAGAACGCCAACGCAGATTCACTGGCAAGTATCACAACTTCTTCTACCCATCCTGTATATTGTCCCTTTTGGTCTGTCTTGGAATACAAATTTTTTAGTAGACGAGATTTGACGAAAAAAGTTCTTCATATTCATAGGGAGAACAACTATTTTTTTTTATGTGAATTTGACATAACAGGTGAGAAACCACTATTTATAAATTAATAATTTAATTGAAAAAAAAAATTCTCTTTTGCGAGAACCCTAAGTATCACTTCACTATATATAACGGAACCTTTTTTTTAAGACCCACTCTTGGCGGCTGCCTATGATACAGAATTGAGCAGGACTGTACCAGTTGAGATTTTGTCTGAGCCTGCAGTATGTACTGAGGAGTTCTCGAGACAGATGACCGAGCAGAGGCCGAGCCAGAGGATGAGGCCGAGGATGAGGCCGGGGTCGAGGCCGAGCCTGAGGATAAGTCCGAGGCCGAGGCCGAGCCTGAGGATAAGTCCGAGGCCGAAGATCCAAGGCCCGAGGTCGAGGATCTTGCAGATGGGGAGGGCATCCCATCAATTGAAACTGAACCCTCCCCTAAAGCAAGAGAAGCTTCATGGATGGATCCGATCCTTGATTACTTAGAGAGAGGCGAGCTGCCAGCAGAGAAGACAGAAGCTAAAAAGGTTCAAAGGCGAGCATCACATTTTGTGTTAAGGGAAGGGAAACTATATAAAAGAGGCTACTTAATGCCGTTGTTGAAATGCCTTCCCCCAAGCGATGCTAACTACGTTATGTGAGAGATACATGAGGGGGTGTGTGGAAACCATTCAGGAGCAAGGTCACTGTGTCACAAGATAGTCAGGCAAGGTTACTACTGGCCAACTATGTTGCAAGACGCTAGGCATTTTACGAGATCTTGCGATCAATGCTAAAGGTTTGCACCCATTCCAAGGCAACCACCTGAGCCTTTAACGAGCATTATCAGCCCATGGCCGTTCGCACAATGGGGAATAGATCTGATCGGACCTCTCCCCCAAGGTAAAGGACAGACCAAGTTTGCAGTCGTGGCTGTGGATTATTTCACAAAATGGGCGGAGGCAAAACCGCTAGCAACCATAACCGAAAAGAAGGTTACTGATTTCATATGGAGGAATATTGTATGCCGCTTTGGGATTCCTAACACCATCATATCAGATAATGGTAGGCAGTTCGACAATGCCGCTTTCAGAAAGTTCTGCTCAGATTTGGGCATAACGCATCGTTGTTCATCCCCAGCCCATCTGCAAGCTAATGGCCAGGTGGAGGCTGTGAATAAAATAATCAAGCAGAATCTGAAAACGAAGCTTGAAGGGCTAAAAGGATTATGGGCTGAAGAGCTCCCACGTGTGCTGTGGGCGTATCGGACAACAGCGCGAACCTCAACAGGAGAAACGCCATTTTCCCTTTCATTCGGGGCAGAGGCAGTAGTCCCAGTGGAGATCGGCATCCCCTCCCCCAGGACAGAGCAGTTTAGTGTGCAGAGAAATGATGAAGCTATGAGGTTGAACTTGGACCTTCTAGACGAGCATCGTGAAATGGCACAACTCCGGGTTGCAGAGTATAAAAACAGGATTGCCAGATATTATAACACGAAAGTGAAAAGGCGCACTTTCAAGGAAGGAGATCTAGTACTGAGGAAAGTCATGCAGAACACCAGAGATCCCAATGCAGGTGCACTGGGACCAGCATGGGAAGGGCCTTATCAAGTTAGCAAAGTGGTCCGCCCTGGCACCTATGCCTTGGTTGACGAAAACGGAAAACCAACTCCACACCCATGGAATGCAGAACACTTGAAGATTTACTATCAGTAGCCATAACAGAAATAAGTGGCAGGCAACGCCACCACTGTAGGAAGGCCGAGGCCGACCAGGAACAATGGCTTTTTCTATTTATGTTTACTTTACATAGAGACTGTCTATCATTTTTCTCATTGAAAAACACACGAACATTTGCAAATTCAATAAAAGCTATTATGTTGTGTTTTGCATAAAGCAGGATGTGACGCATACAGCCAAACGAGAATAATTCTTGCAGAGGCCAAGCTTCCGCACTTTCCCAGACAAGAATGATTCTTGCAGAGACTAAATTCCTGCAGAGAGGTTGACACATGTCCTCAACCTCCCCAGGTCCCCAGCAGAGTGTACGCACCCCTGGGATGAACACAACACTTGGAGAGAGGCTCGGGAATTTCCTCGACCTCCCCAAGTTTCCCCGACTGAGTGCATGCACCCTTGGGATGGAAAACAAGCAAGCGAACAACACAGAGGAGCTGGTCGGCCTCATGCCAAGGCCGAGGCCGACCATTCAGAGGCCAGGGCCGAGCTCCACCCTCAAAGGCCCGGGTACGAAGTTAGTTTTTCCTTACTCAAAAAATGCATGTCCAAGATATTGAATACACATTTTGAGTGGGGGGTTGGGAATAAGGACAGATAGAGTCCATCATAATCATGGTCATGTTGCGATGATTTTGATTTTCCTTTCTTACTTATTCAAGATAGGATTACGTTATGAATATCGGTGGAGCTATTTTTGAGATTATTTATTTTCATTTTGTATAACACATGTCCATAGATTTTCTCCATGGTACAATGCCAACACTTGCAAATTTAATAAAATTCTTTATATTGTGTTTGTGCAAAGCATTTTTCCATAGGATGTAGCGCATGTGGCCAGACGAAAATGACTCTTGCAGAGGCCAAACTTCCGCACTTTCCCGTGGAAAGAGACTGAATTCTTGCAGAGAGGTTGACGCATGCCCTCAACCTCCCCAAGCTTTTCCTCAGAAGAGTGTACGCACCCTTGGGATGACCACGATGCTTGAAGAGAGGCTTGGGAAATACCTAGGCCTCCCCAAGCTTTTTTCCCAGAAGAGTGTACGCACCCCTGGGATGAACACAGCGCTTGAAGAGAGGCCCGGGAACTTCCTAGGCCTCCCCAAGCTTTTCCCCAGAAGAGTGTATGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCTTGGGAAATACCTAGGCCTCCCCAAGCTTTTTCCCCAGAAGAGTGTACGCACCCCTGGGATGACCACGATGCTTGAAGAGAGGCCCGGGAACTTCCTAGGTTCAAAACCGACATACAAGTTAGGTTCAGGCAAGATGGTAGGCCCGTGCAAACGTCACATTGAAATTCAACTCCAAGGAACATTGCAGACAGACAGACATTGATAGATCTAACTCGAGAGGGTTGGGTTAGTTTCAAATATATCAACTACTTTTCATGAACAGGTGGTGGAGTTTTAGATGGACAAGAAAAAGTAGCTTGAGAAAAAAATGATTGTGACAAAAATCTAAAATGCGACAGAATTCTCATGGTAAGCACACTTCAATCATCAAATTAACGTTCTTAGTACCTTTCTCTTTTATAGTTTATATTTTAGTTAAACTATATAATCCATATTGTTAGATTTTTAATAAAGATCAAACTAACAACTCAAAATTTCTTTTAACTAAATATATACATGCATGATCTTTTTTTTTTTTCTATCAAAAACTTGCAGACTTTGAAGCTCAGCTTTATCACAAATTCAATAGTGAGTGACATCACCCTTAAACATAGCAAGAACTTTCATGTTAATGTTTTGGGTTGTGAAAACCTTACCTTCCAACATGTGAACATAAATGCAGTCGAAAATAGTATCAATAGTGAAGGAATTCACATTGGTCATTCTACTAGGATTAATGTCATCAATACAAACATTGGCATCGAAAATGATTGTATCTCACTTGGAGATAGAAGTAAGCAAGTAACAATTACTAACGTGACATGCGGGCCTAGACATGGTATGAGTGTAGGAAGTTTAGGAAAGTACGATGTTAAAGAACCCGTTGAGGGAACTGGGAATCATAGTTAAGAATTGTACATTGATAAATACATCAAATGGCGTAAATCAAAACATGGCTTGCTTCTCCGGCTTCTGGAAAAGCTTTTGATATGCACTATGAAGATATAACTACGGTTAAAGCCAATAATCCTATTCTCATAGATCAAGAGTATTGTCCATAACACCAATGTAATGAAAAGGTACTGTTCACACGTAACTTCGAAGATGGAAACACGTGGAATAAACAATATATTTGTATTGATATAATATGCGTGTGGGTGTACAATCTCTAACTTTAATCCTCTGATTCTCTCTCTTGTGTGTGATTGTGTTTCACTCGAGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGAGAATGTAAACAAATTTTATACTTGTATTTAATAAAGTGTTATTTAGTTTCTGCAATAAAATGTTATTCTTAAATATTGCACTATTTGACCCAAATCCAATAAACTGAGATCCAAGGTTTTTTGCATGTAACTTGAACTAGTATGAAGGGACATACGGGGATCGATGTTCAAGTAACAACCTAAAAGGTCTATAGTACAAGGATAAGGCTGGGTACCTTATCCTGGTGACACTATGGATACGACCCGCTTTGTATTATGATACAAACGCAATGATCCAACGCGTTCATGTGTTTGACATGCAAGTGGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCGCGAAATAGTTAACCACTAACTGTAACACCGTTAGTTGACTTGGTTTCTATTTTACTAGGATGACTGATAACTGCCCAAAAGGTAGTTATTTAGGCCTCATTTATATAGGGTTTTGTGTGTCCTTTGTGCTTATTAGGGTTGGTTGTGGATAGATATTACATGTTTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCATTTTGTGCAGAATCTGTTGCTGGGCGACTTGAGGGAGCGGATTTTATGCTGGAGCAAACCCGGAGGCAAAACTGCCACGTCACAACTCGTTATCCAATTTAGTAAACCGACTTCTGTTGAGTTATTTTCGGGATAAAGGAGCAAGGAGAGCCCTACACGTGTCCAAGTTGACCTAATTCAAGCCTCCTACCACCTCTATAAAAGGAGATAGCCGCCCAAGTCAAATTCATTCCAACTTCCCTTGGAAGCCGAGTAGTATAGAGAGATTGGAGATTATCAAGAACACCATCATCCGCAAGCTGATTAAGGAGATTATTATTTTCTTTATTATCTTGTGATAATGGACATGCCTACTCAGATTGTAATTCATGTTTCCATGCTTATTATGAACTAAGTAGCCTTAGGCGTTGGTTAGGGAAGATGTAGTTGTCGTGCTTAAACTCTAATAATATTTATTGATTATTGCATCTTGGTTAATTGTTGTGCTTGTTTCTATTTTATGCCCGCTTGGCCAGCCGGTGTGAATACCTCTCTCTAGTTTCAGGGATGATTTAGAGAGTGTATGGCAATTATCCACACTACGATCATTGTGTATTGGTGAACGCCAGTGACTGAGCTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTCGCACTTCATTGGGGTTGAAACACATTCCAAAAGATCCGGAGTTCCGGGAGGAATCCGCTAATAATACTGCGAGAGTTTGCATGATCAATAATATTGCTAGAGCATCTTTTAAAACAATTACAAAACTTAACCAGCGCCTGTCTTTAATCTATCTGCCTATTTGTTTACTCGTTGTTCTATCATTTATTTTGCTTCAGCATAATTCTTATAAAACCCAATCATTTTTATTACTTTGAAACCATTAAAAAGAATTATACAAAATAGATAAAGTGGAAGCTAATTCAGGCCTTGGATTGATAATACTTATTACTTGCTGCGGACTGTGTATACTTGCACATGAATTCTAGAGTCTTTTTACACCATATTTTTACTCACTCTAGGAGCCCAACAATGACCTAGACAACTCAGTCTCAATCCTGAGTGGATTATGGACTCCTGTTCACGAGGGGTTGTCCTTTGATTTGTATGGGTGAGAGTGGTCAGCACGGCAACTCAATAAGCCTACCATTTTGGGGACAATACCGAGTGGGGAGCTGGGAACATAATCACACAAGTTGGAATTCACTCCTTTTCGACTCTAGGGTAAGTAGAGGTGTGTTCCCTTAAGTGGTGTCTCCGGGACTTGAACAATGGGCCTAACCCTCTCTATGGCACGAGAGGGACTTCTGTTTGTTTGTTGGACCTCAAACAGGTTGTTCATTAGAGGAACACTGAGGACTTAAGGACAGAGATGTAAACCAGGGGGAAAACGGTAATTTGACTCAGCTGGGATACGAACACACGTGAAGGACTGACTTGTAGTATTGGTCGATATCCTTGGACACATAAATATTCTGCAGTGAGAAGAGTGCAGCTGTGGGTCTTTAGTGGAGTGACCCACAGTTAACGAATGGAGACTAACTTCGTTAATGAGTTTAAGCCGATTAGTCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTCGGTCCCACTGGTAGCTCGTAAAAAGACTTGAAGCAAACAAATATAAATTGTAAATTGAAAGTGTTCAATTTATTTGGGGAATCATATAATGCATATTGATGCATTATAATACAAAGTTTATGATATTGTTATAATTGCCTATCTCTTGCCCTCTTTTACTGATTATTTGTATGGATGTTCGTAATGCTTTATGCAATCTAGCCAATTGTATATTGATCCGATTCTTAATGGAAACTCGACGGAGAGAAATTAGGATAGATCATAATCCATGCAACTGGTTTAATTGCCTGTCGTGACAACAGGTTTAGTTGATTAAACTTAGATTCCTAAAATGAATCAGAGCGTAATAATTAACGAATTTTAATGGCGCTAAGGACACTTAGGTTGTTAAAATGGATTAATTATAATTAGGGGAAACCGACAGGAGAACCTATGTGATTAACGGAGATTCTAGGAGTATAATTAGTTGGGCAATTAGATAGGATAATTGTAATAATTGTTTAGCTATTAATTGATTTTCAAGACCCCACTTCCCATTAAAAACTCTTTCTGCATAGTTTTTATTTCTTGATTGATCAATTTAATTTCCTTAATCGCTTTAATTTTTAAATTCATTTTAATTGCTTGGTTTGGTCCCTAGATATTATTTCCCCCAAATATTTTTAGTGTTCAAGGAATTTTTGCTTTGCTTAAATTTCGTTTCGCCTCCCTGTGGATTCGATACTCGGAATATTTCTGTTTTATATTACTTGCGGCCCGTGCACTTGCGGTATTGCGGTGTAGGACCACCAACAAGTTTTTGGTGCCGTTGCCGGGGAGGTTTGATTTTTAAGCAAAATAATTTTTCTTGACATTAAAAAGAACAGGATAAATAGTAATTTAGGTTGTAAATATTTTTGTGAATATTGTTTTATTTTTGTTTTTGTTTGGTTCTTTTGATTGATTGGGAGTGTTGCATGCGAAGACATAAGGTGGTTGAATTGTTTCCTTTAGATCTTGAAATTACCAGGACACTCAGATCTATTCGTAGAAAGAAAAGATTAACGGAAGCAATGGCCCATCAAGATGAAGCTCCCAAGGCAATCAGAGACTTTTTGCAGCCAGTCCTCCCAACCGAGAATTCAGGCATCGTCTACGCCCCGATTCAAGCAAATAATTTCGAGTTAAAGACAGGACTGATCCAGATGGCGCGAGACAATTCTTTTAAGGGACACCCTTCTGAGGATCCACATTCACATCTGCGATCATTCTTGGAGATATGCTGGACGGTAAAGATGAATGGAGTTTCGGTCGACGCGATAAGATTGAGGTTATTCCCATTTTCTCTGCAAGATAAAGCTAAAGATTGGCTCGAATCAGTCGAGACGGGCAGTATCAGCACATGGGACGAGCTTGCCCAGGCATTCCTGACGAAATTTTTCCCGCATGCCAAGACTACGAAGCTCCGGACAGAGATCGAAACATTTAGACAGTTGGATGAGGAGCAACTTTACGAGGCATGGGAGAGATATAAGGAGATGCTTAGGCGGTGCCCGCAGCATGGCTACCCAGATTGGCTCCAGGTGCAGTTATTTTACAATGGACTGAATCCTTCCACTAAGACGGTTCTAGACACATCAGCGGGTGGGAGTTTTCTTTCCAAGATAGTAACGGAAGCCAAGGATCTTTTGGAGTAAATGGCAGCGACCAGTTATCGGTGGCCGACTGAAAGGGGGATAGTTTCCAAGAAGGCTGGTATTTATGAAATAGATGAATCAAGTTCGTTGAAGGCACAGATGGCATCATTGACAAACGCTCTGAACAAGCTGACTTCATCTGAAGTGGTCAAGTCCATCTCCACCTTAGCTGAAGGATATTCAAAGAAAGAGAATCAAGATGTTGAAGAAGTTCAGTATGTGGGAAATAGAGCATTCACTCAAGGAGTACTGAACTTCTACCATCCCAGTCTGCGCAATCATGAGAACTTTTCCTATTCGAACACCAAGAACGTATTGCAGCCACCACCAGGATTTGCTTCAACCAGTACGCCAGAAAAGAAGAGTAACCTGGAGGAGATGGTGGCCATGTTTATCAAGGAACAGAAGGTGTTAAATGTGAATCTCCAGACAGCAGTTAATAACCACGACACAGCTCTTAAGAATATGGAAGTTCAGATAGGTCAGATCGCTTCAGTGGTGAATGCCCTTCAGAAAGGGAAGTTTCCTAGCGACACTGAACCCAATCCTAGAGAGCAGTGCAAGATGGTGACACTGAGAAGTGGTAGACAGTTGGAGGTCAGTTCAGAGAAGAAGAAAGAAGAGAAGAGCAAGGATAAAGATGGAAGGGCTAAGGCACAAAAAGCCTCCTCTGAAAGGTCCCAACATCCTCCTAACTCTATTAATTGTGATTTTTCTAACTCTTTTGCAGGATCAGAGAAAGATGAAAGACATGAAGAGAAGCTGAACGAGGAAGAAGTGGTTCCATGCAACCATCATGATAAAGGCTCGCACATTAGCCCGCCCAAGAGGAGGGGCGAATGTCCTACCTTTGACTACAGGGAGTTACCTTTTCCTCAACGCTTTAAAAATGTTAAATTAGATGAACAGTTTCAGAAATTCCTAGAAATGTTTAGAAAATTATATGTGAACATTCCCTTAGTAGATGCTTTGTATAATATGCCTAATTATGGGAAGTTCATGAAAGAGATGGTATCTAGGAAGAAAAGTTTGAAAAAATAGGTTTTTAGGTTGTCTGAAAACAGTAGCACCATAGTGTCAGGAAAGATGCCTTCTAAACAAAAAGACCCAGGGAGTTTTACTGTTCCCTGTATTATAGGAGAAGTATCTTTCAATAGGGCTTTGTGTGATCTAGGTGCTAGTATAAATTTGATGCCCTATTCATTGTACAGGAAGATTGGTTTGATAGGTCTGAAAGACACTGACATCACCCTCCAGCTGGCTGATAGATCGATCACCCAACCGATGGGTATTGTGGAGAATGTGCTGGTGAAGGTCAACAAATTCATCTTCCCTGTAGATTTTGTGGTGCTCGGCATGATAGAAGACAAAGAGGTACCCATCATCTTATGCAAACCTTTCTTATCCACAGGTAAGGCTGAAATTAGCGTACATACTGGTAAGCTTACCTTGAATGTGGATGATGAAAAGGTCGTTTTTAATATTTTTGGACAGGATGAGTTTGTATGTAGTTTGCATACATGTTTTTCTATAGGTCCAGAATATTTGACTGACGATGATGAAGAGGTAGAGTATAATCTTGGCTTAGGATTAGGAGAAGCGCCTATGAATGGTGAAAATTTTAATCCTAATGCATTTTTTGATGACCCTCTATTTGAAAATGAGCTGATAGATGTTGATTTGCCTTTTTTTCAAAATGAAATTGAAATGCCTGAATTAGATGTTGTCTGATTTTGAGAATGAGCTTGATATGCCTGATAATGTGCATGATTTGCATGAAGATGATTACTTGATAGGTGATAATTTTGAGTCTGATCATGATAATGCTGAATCTATCGAGTCTGATCCAGATGAGTATATAGAGTCAGACCCTGAAAGTGTGAATAATTTTGATTCGGGTCCTGATGATGTGGATAATAGTATAGAATCTGACCCAGAGGAGCTTGAATTCTTTAATTCTTCTGATAGTGAGTCATATGATAGCCTAGTTGAATCATTTTTTAATACTGAGTCTGAGGAATCCGCTGAGCATGTAGATATTGAATCTGATGAGTGGATAGGCATAGTTGATAGGCCATCCTTAGATCCTAGACTAGTAGACATCATGACGCTGGATGACTCTGTGAATAACTATTTTGAGAATAGAGACTTAGAAAAGAGATTTGATGCTGCTACATATTTTTTGTAA

mRNA sequence

ATGTCATCTATGTCCACGTCCAGTTTCCACATCAGAATATCATCATTCTGGGAGGGAGAAAGGGTAATTTTGGACCACACCGACGAACAAGGAGCTGACGAGGACATTCGGGCGAAAGTAGGAGCAGAAAACCGACCCAGAGGAAGATCGGACCAAAGGGTCGGGCCAACATGGCCTGACCCATATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGCGCCAACGGGCCGAGCTCGTTCACCTCCTTTCGGCCACTGATGCCCCGGATCGCCCCGGTTCCGCCTGGTTCGTCCGGAAACACCTTCGAATTCCTAAAAACCCTAGGAGGAAAAACAGCTTCTCCTTGGTTTTCTGACTTAAGCATCGGAGACGGTGTGGCCTACACCACACCGGTGTGCAGCGGTTCTTGTTGGTCTTGTAGGTCACGTCTTCCCCATTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGATCGCGCATCGGTGGTGGTTTGTAGGATGGATCGAGTTCAGAAACCAGAAGGAAACCTTGGGTATGAGCAGAAAGCGACGAGCCAGACTGGGGCCGACCTCAGTAGGGAAAAGGCCGACCCTAACTTCGAAGATTGTGGAGTTCTCGAGACAGATGACCGAGCAGAGGCCGAGCCAGAGGATGAGGCCGAGGATGAGGCCGGGGTCGAGGCCGAGCCTGAGGATAAGTCCGAGGCCGAGGCCGAGCCTGAGGATAAGTCCCCAGCAGAGTGTACGCACCCCTGGGATGAACACAACACTTGGAGAGAGGCTCGGGAATTTCCTCGACCTCCCCAAGTTTCCCCGACTGAGTGCATGCACCCTTGGGATGGAAAACAAGCAAGCGAACAACACAGAGGAGCTGGTCGGCCTCATGCCAAGGCCGAGGCCGACCATTCAGAGGCCAGGGCCGAGCTCCACCCTCAAAGGCCCGGGTACGAACGCATGTGGCCAGACGAAAATGACTCTTGCAGAGGCCAAACTTCCGCACTTTCCCGTGGAAAGAGACTGAATTCTTGCAGAGAGGTTGACGCATGCCCTCAACCTCCCCAAGCTTTTCCTCAGAAGAGTGTACGCACCCTTGGGATGACCACGATGCTTGAAGAGAGGCTTGGGAAATACCTAGGCCTCCCCAAGCTTTTTTCCCAGAAGAGTGTACGCACCCCTGGGATGAACACAGCGCTTGAAGAGAGGCCCGGGAACTTCCTAGGCCTCCCCAAGCTTTTCCCCAGAAGAACTTTGAAGCTCAGCTTTATCACAAATTCAATAGTGAGTGACATCACCCTTAAACATAGCAAGAACTTTCATGTTAATGTTTTGGGTTGTGAAAACCTTACCTTCCAACATGTGAACATAAATGCAGTCGAAAATAGTATCAATAGTGAAGGAATTCACATTGGTCATTCTACTAGGATTAATGTCATCAATACAAACATTGGCATCGAAAATGATTGTATCTCACTTGGAGATAGAAGTAAGCAAGTAACAATTACTAACAATCTGTTGCTGGGCGACTTGAGGGAGCGGATTTTATGCTGGAGCAAACCCGGAGGCAAAACTGCCACGTCACAACTCGTTATCCAATTTAGTAAACCGACTTCTGAGCCCAACAATGACCTAGACAACTCAGTCTCAATCCTGAGTGGATTATGGACTCCTGTTCACGAGGGGTTGTCCTTTGATTTGTATGGTGAGAAGAGTGCAGCTGTCCATTCGGTCCCACTGGACCACCAACAAGTTTTTGGTGCCGTTGCCGGGGAGATGTTGTCTGATTTTGAGAATGAGCTTGATATGCCTGATAATGTGCATGATTTGCATGAAGATGATTACTTGATAGGTGATAATTTTGAGTCTGATCATGATAATGCTGAATCTATCGAGTCTGATCCAGATGAGTATATAGAGTCAGACCCTGAAAGTGTGAATAATTTTGATTCGGGTCCTGATGATGTGGATAATAGTATAGAATCTGACCCAGAGGAGCTTGAATTCTTTAATTCTTCTGATAGTGAGTCATATGATAGCCTAGTTGAATCATTTTTTAATACTGAGTCTGAGGAATCCGCTGAGCATGTAGATATTGAATCTGATGAGTGGATAGGCATAGTTGATAGGCCATCCTTAGATCCTAGACTAGTAGACATCATGACGCTGGATGACTCTGTGAATAACTATTTTGAGAATAGAGACTTAGAAAAGAGATTTGATGCTGCTACATATTTTTTGTAA

Coding sequence (CDS)

ATGTCATCTATGTCCACGTCCAGTTTCCACATCAGAATATCATCATTCTGGGAGGGAGAAAGGGTAATTTTGGACCACACCGACGAACAAGGAGCTGACGAGGACATTCGGGCGAAAGTAGGAGCAGAAAACCGACCCAGAGGAAGATCGGACCAAAGGGTCGGGCCAACATGGCCTGACCCATATGGTCGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGCGCCAACGGGCCGAGCTCGTTCACCTCCTTTCGGCCACTGATGCCCCGGATCGCCCCGGTTCCGCCTGGTTCGTCCGGAAACACCTTCGAATTCCTAAAAACCCTAGGAGGAAAAACAGCTTCTCCTTGGTTTTCTGACTTAAGCATCGGAGACGGTGTGGCCTACACCACACCGGTGTGCAGCGGTTCTTGTTGGTCTTGTAGGTCACGTCTTCCCCATTGGCGCCGTCTGTGGGGAAGAGTGCTTGCCAGTTCAGATCGCGCATCGGTGGTGGTTTGTAGGATGGATCGAGTTCAGAAACCAGAAGGAAACCTTGGGTATGAGCAGAAAGCGACGAGCCAGACTGGGGCCGACCTCAGTAGGGAAAAGGCCGACCCTAACTTCGAAGATTGTGGAGTTCTCGAGACAGATGACCGAGCAGAGGCCGAGCCAGAGGATGAGGCCGAGGATGAGGCCGGGGTCGAGGCCGAGCCTGAGGATAAGTCCGAGGCCGAGGCCGAGCCTGAGGATAAGTCCCCAGCAGAGTGTACGCACCCCTGGGATGAACACAACACTTGGAGAGAGGCTCGGGAATTTCCTCGACCTCCCCAAGTTTCCCCGACTGAGTGCATGCACCCTTGGGATGGAAAACAAGCAAGCGAACAACACAGAGGAGCTGGTCGGCCTCATGCCAAGGCCGAGGCCGACCATTCAGAGGCCAGGGCCGAGCTCCACCCTCAAAGGCCCGGGTACGAACGCATGTGGCCAGACGAAAATGACTCTTGCAGAGGCCAAACTTCCGCACTTTCCCGTGGAAAGAGACTGAATTCTTGCAGAGAGGTTGACGCATGCCCTCAACCTCCCCAAGCTTTTCCTCAGAAGAGTGTACGCACCCTTGGGATGACCACGATGCTTGAAGAGAGGCTTGGGAAATACCTAGGCCTCCCCAAGCTTTTTTCCCAGAAGAGTGTACGCACCCCTGGGATGAACACAGCGCTTGAAGAGAGGCCCGGGAACTTCCTAGGCCTCCCCAAGCTTTTCCCCAGAAGAACTTTGAAGCTCAGCTTTATCACAAATTCAATAGTGAGTGACATCACCCTTAAACATAGCAAGAACTTTCATGTTAATGTTTTGGGTTGTGAAAACCTTACCTTCCAACATGTGAACATAAATGCAGTCGAAAATAGTATCAATAGTGAAGGAATTCACATTGGTCATTCTACTAGGATTAATGTCATCAATACAAACATTGGCATCGAAAATGATTGTATCTCACTTGGAGATAGAAGTAAGCAAGTAACAATTACTAACAATCTGTTGCTGGGCGACTTGAGGGAGCGGATTTTATGCTGGAGCAAACCCGGAGGCAAAACTGCCACGTCACAACTCGTTATCCAATTTAGTAAACCGACTTCTGAGCCCAACAATGACCTAGACAACTCAGTCTCAATCCTGAGTGGATTATGGACTCCTGTTCACGAGGGGTTGTCCTTTGATTTGTATGGTGAGAAGAGTGCAGCTGTCCATTCGGTCCCACTGGACCACCAACAAGTTTTTGGTGCCGTTGCCGGGGAGATGTTGTCTGATTTTGAGAATGAGCTTGATATGCCTGATAATGTGCATGATTTGCATGAAGATGATTACTTGATAGGTGATAATTTTGAGTCTGATCATGATAATGCTGAATCTATCGAGTCTGATCCAGATGAGTATATAGAGTCAGACCCTGAAAGTGTGAATAATTTTGATTCGGGTCCTGATGATGTGGATAATAGTATAGAATCTGACCCAGAGGAGCTTGAATTCTTTAATTCTTCTGATAGTGAGTCATATGATAGCCTAGTTGAATCATTTTTTAATACTGAGTCTGAGGAATCCGCTGAGCATGTAGATATTGAATCTGATGAGTGGATAGGCATAGTTGATAGGCCATCCTTAGATCCTAGACTAGTAGACATCATGACGCTGGATGACTCTGTGAATAACTATTTTGAGAATAGAGACTTAGAAAAGAGATTTGATGCTGCTACATATTTTTTGTAA

Protein sequence

MSSMSTSSFHIRISSFWEGERVILDHTDEQGADEDIRAKVGAENRPRGRSDQRVGPTWPDPYGRPRQKAEADHSARANGPSSFTSFRPLMPRIAPVPPGSSGNTFEFLKTLGGKTASPWFSDLSIGDGVAYTTPVCSGSCWSCRSRLPHWRRLWGRVLASSDRASVVVCRMDRVQKPEGNLGYEQKATSQTGADLSREKADPNFEDCGVLETDDRAEAEPEDEAEDEAGVEAEPEDKSEAEAEPEDKSPAECTHPWDEHNTWREAREFPRPPQVSPTECMHPWDGKQASEQHRGAGRPHAKAEADHSEARAELHPQRPGYERMWPDENDSCRGQTSALSRGKRLNSCREVDACPQPPQAFPQKSVRTLGMTTMLEERLGKYLGLPKLFSQKSVRTPGMNTALEERPGNFLGLPKLFPRRTLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRINVINTNIGIENDCISLGDRSKQVTITNNLLLGDLRERILCWSKPGGKTATSQLVIQFSKPTSEPNNDLDNSVSILSGLWTPVHEGLSFDLYGEKSAAVHSVPLDHQQVFGAVAGEMLSDFENELDMPDNVHDLHEDDYLIGDNFESDHDNAESIESDPDEYIESDPESVNNFDSGPDDVDNSIESDPEELEFFNSSDSESYDSLVESFFNTESEESAEHVDIESDEWIGIVDRPSLDPRLVDIMTLDDSVNNYFENRDLEKRFDAATYFL
Homology
[Close]
BLAST of Spg019738 vs. NCBI nr
Match: XP_022157387.1 (exopolygalacturonase-like [Momordica charantia] >XP_022159278.1 exopolygalacturonase-like [Momordica charantia])

HSP 1 Score: 131.0 bits (328), Expect = 4.4e-26
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0 

Query: 420 TLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRI 479
           +L+ SFITNSIVSDIT K SKNFHV +LGC NLTFQHVN+NA  +SIN++GIHIG ST I
Sbjct: 145 SLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGI 204

Query: 480 NVINTNIGIENDCISLGDRSKQVTITN 507
           N+++TNIG  +DCISLGD SKQVTITN
Sbjct: 205 NILSTNIGTGDDCISLGDGSKQVTITN 231

[Close]
BLAST of Spg019738 vs. NCBI nr
Match: XP_008459709.2 (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 7.5e-26
Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           LK SFI N+IVSDIT K SKNFH+ VLGC NLTFQHVN+NA E SIN++GIHIG S  IN
Sbjct: 141 LKFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGIN 200

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           ++NTNIG  +DCISLGD SKQVTITN
Sbjct: 201 ILNTNIGTGDDCISLGDGSKQVTITN 226

[Close]
BLAST of Spg019738 vs. NCBI nr
Match: KAA0039364.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK00547.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 7.5e-26
Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           LK SFI N+IVSDIT K SKNFH+ VLGC NLTFQHVN+NA E SIN++GIHIG S  IN
Sbjct: 193 LKFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGIN 252

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           ++NTNIG  +DCISLGD SKQVTITN
Sbjct: 253 ILNTNIGTGDDCISLGDGSKQVTITN 278

[Close]
BLAST of Spg019738 vs. NCBI nr
Match: KAA0066598.1 (exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK14219.1 exopolygalacturonase-like [Cucumis melo var. makuwa])

HSP 1 Score: 120.6 bits (301), Expect = 6.0e-23
Identity = 61/86 (70.93%), Postives = 71/86 (82.56%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           ++  FI N+IVSDIT K SK+FH NVLGC+NLTFQ+VNINA ENS N++GIHIG S  IN
Sbjct: 128 VRFDFIKNAIVSDITSKDSKSFHFNVLGCKNLTFQNVNINAPENSPNTDGIHIGRSIGIN 187

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           VINTNIG  +DCISLGD S+QV ITN
Sbjct: 188 VINTNIGTGDDCISLGDGSQQVAITN 213

[Close]
BLAST of Spg019738 vs. NCBI nr
Match: KGN51148.1 (hypothetical protein Csa_009319 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 1.3e-22
Identity = 61/98 (62.24%), Postives = 75/98 (76.53%), Query Frame = 0 

Query: 409 FLGLPKLFPRRTLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINS 468
           F  +P     + ++  +I NSIVSDIT K SK+FH NVLGC+NLTF+HVNINA ++S N+
Sbjct: 16  FGAMPNTEIFQNVRFDYIKNSIVSDITSKDSKSFHFNVLGCKNLTFKHVNINAPQDSPNT 75

Query: 469 EGIHIGHSTRINVINTNIGIENDCISLGDRSKQVTITN 507
           +GIHIG S  INVINT IG  +DCISLGD S+QVTITN
Sbjct: 76  DGIHIGRSVGINVINTKIGTGDDCISLGDGSQQVTITN 113

[Close]
BLAST of Spg019738 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 1.5e-21
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           L+L  +TNSI+ D+T   SKNFHVNV+GC+NLTF+   I+A E SIN++GIHIG S  +N
Sbjct: 110 LRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDGVN 169

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           +INT I   +DCISLGD SK + ITN
Sbjct: 170 IINTEIKTGDDCISLGDGSKNINITN 195

[Close]
BLAST of Spg019738 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 6.0e-18
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 0 

Query: 424 SFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRINVIN 483
           +F+ NSIV  +T K SKNFHV V GC+N+TF    I A  +S N++GIH+G ST + ++N
Sbjct: 153 NFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKILN 212

Query: 484 TNIGIENDCISLGDRSKQVTI 505
           TNIG  +DC+S+GD SKQ+T+
Sbjct: 213 TNIGTGDDCVSIGDGSKQITV 233

[Close]
BLAST of Spg019738 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.3e-16
Identity = 42/85 (49.41%), Postives = 60/85 (70.59%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           L+  F+ +++V DIT  +SK FH+NVL CE++TFQHV + A   SIN++GIH+G S  + 
Sbjct: 131 LRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGVT 190

Query: 481 VINTNIGIENDCISLGDRSKQVTIT 506
           + NT I   +DCIS+G  S+ VTIT
Sbjct: 191 ITNTKIATGDDCISIGPGSQNVTIT 215

[Close]
BLAST of Spg019738 vs. ExPASy Swiss-Prot
Match: Q05967 (Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-15
Identity = 55/159 (34.59%), Postives = 85/159 (53.46%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           L  + +TNS + DIT   SK+FHVNV  C+NLTF   N++A  NS N++GIH+  S+ +N
Sbjct: 144 LSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 203

Query: 481 VINTNIGIENDCISLGDRSKQVTIT-------NNLLLGDLRERILCWSKPGGKTATSQLV 540
           + ++N    +DCIS+GD ++Q+ IT       + + +G L          GG      +V
Sbjct: 204 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSL----------GGNPDEKPVV 263

Query: 541 IQFSKPTSEPNNDLDNSVSILSGLWTPVHEGLSFDLYGE 573
             F +  +  N   DN V I +  W   H G+  D++ E
Sbjct: 264 GVFVRNCTFTNT--DNGVRIKT--WPASHPGVVNDVHFE 288

[Close]
BLAST of Spg019738 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.8e-14
Identity = 36/84 (42.86%), Postives = 59/84 (70.24%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           ++  F+TN+++ DIT K SK FH+NV  C+N+T + + I A + S N++GIH+G S  +N
Sbjct: 152 IRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVN 211

Query: 481 VINTNIGIENDCISLGDRSKQVTI 505
           +I ++I   +DCIS+GD +K + I
Sbjct: 212 IIASDIKTGDDCISIGDGTKNMVI 235

[Close]
BLAST of Spg019738 vs. ExPASy TrEMBL
Match: A0A6J1DUC6 (exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 2.1e-26
Identity = 64/87 (73.56%), Postives = 75/87 (86.21%), Query Frame = 0 

Query: 420 TLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRI 479
           +L+ SFITNSIVSDIT K SKNFHV +LGC NLTFQHVN+NA  +SIN++GIHIG ST I
Sbjct: 145 SLRFSFITNSIVSDITSKDSKNFHVQILGCNNLTFQHVNVNAPGDSINTDGIHIGRSTGI 204

Query: 480 NVINTNIGIENDCISLGDRSKQVTITN 507
           N+++TNIG  +DCISLGD SKQVTITN
Sbjct: 205 NILSTNIGTGDDCISLGDGSKQVTITN 231

[Close]
BLAST of Spg019738 vs. ExPASy TrEMBL
Match: A0A5A7T7B3 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001590 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-26
Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           LK SFI N+IVSDIT K SKNFH+ VLGC NLTFQHVN+NA E SIN++GIHIG S  IN
Sbjct: 193 LKFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGIN 252

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           ++NTNIG  +DCISLGD SKQVTITN
Sbjct: 253 ILNTNIGTGDDCISLGDGSKQVTITN 278

[Close]
BLAST of Spg019738 vs. ExPASy TrEMBL
Match: A0A1S3CC08 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103498752 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.6e-26
Identity = 64/86 (74.42%), Postives = 72/86 (83.72%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           LK SFI N+IVSDIT K SKNFH+ VLGC NLTFQHVN+NA E SIN++GIHIG S  IN
Sbjct: 141 LKFSFIKNAIVSDITSKDSKNFHIQVLGCNNLTFQHVNVNAPETSINTDGIHIGRSLGIN 200

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           ++NTNIG  +DCISLGD SKQVTITN
Sbjct: 201 ILNTNIGTGDDCISLGDGSKQVTITN 226

[Close]
BLAST of Spg019738 vs. ExPASy TrEMBL
Match: A0A5A7VFS7 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00460 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.9e-23
Identity = 61/86 (70.93%), Postives = 71/86 (82.56%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           ++  FI N+IVSDIT K SK+FH NVLGC+NLTFQ+VNINA ENS N++GIHIG S  IN
Sbjct: 128 VRFDFIKNAIVSDITSKDSKSFHFNVLGCKNLTFQNVNINAPENSPNTDGIHIGRSIGIN 187

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           VINTNIG  +DCISLGD S+QV ITN
Sbjct: 188 VINTNIGTGDDCISLGDGSQQVAITN 213

[Close]
BLAST of Spg019738 vs. ExPASy TrEMBL
Match: A0A0A0KNH7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G467920 PE=3 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 6.4e-23
Identity = 61/98 (62.24%), Postives = 75/98 (76.53%), Query Frame = 0 

Query: 409 FLGLPKLFPRRTLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINS 468
           F  +P     + ++  +I NSIVSDIT K SK+FH NVLGC+NLTF+HVNINA ++S N+
Sbjct: 16  FGAMPNTEIFQNVRFDYIKNSIVSDITSKDSKSFHFNVLGCKNLTFKHVNINAPQDSPNT 75

Query: 469 EGIHIGHSTRINVINTNIGIENDCISLGDRSKQVTITN 507
           +GIHIG S  INVINT IG  +DCISLGD S+QVTITN
Sbjct: 76  DGIHIGRSVGINVINTKIGTGDDCISLGDGSQQVTITN 113

[Close]
BLAST of Spg019738 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-14
Identity = 34/87 (39.08%), Postives = 59/87 (67.82%), Query Frame = 0 

Query: 420 TLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRI 479
           +++  F+TN+ + DI+   +KNFH+NV+G +N+TF +V I A   S N++GIH+G S  +
Sbjct: 141 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 200

Query: 480 NVINTNIGIENDCISLGDRSKQVTITN 507
           ++IN+ I   +DC+S+GD    + + N
Sbjct: 201 SIINSRISTGDDCVSVGDGMVNLLVKN 227

[Close]
BLAST of Spg019738 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 4.1e-14
Identity = 34/87 (39.08%), Postives = 58/87 (66.67%), Query Frame = 0 

Query: 420 TLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRI 479
           +++  F+ N+ + DI+   +KNFH+NVLG +N+TF +V + A   S N++GIH+G S  +
Sbjct: 141 SIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGV 200

Query: 480 NVINTNIGIENDCISLGDRSKQVTITN 507
            ++N+ I   +DCIS+GD  K + + N
Sbjct: 201 KILNSKIATGDDCISVGDGMKNLHVEN 227

[Close]
BLAST of Spg019738 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 9.2e-14
Identity = 33/86 (38.37%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           ++ + +TNS ++ IT  +SK FH+N+L C+N+T   + I+A   S+N++GIHIG S  +N
Sbjct: 192 IRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVN 251

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           +I   I   +DC+S+GD ++ + + N
Sbjct: 252 LIGAKIKTGDDCVSIGDGTENLIVEN 277

[Close]
BLAST of Spg019738 vs. TAIR 10
Match: AT3G14040.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-13
Identity = 33/86 (38.37%), Postives = 58/86 (67.44%), Query Frame = 0 

Query: 421 LKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRIN 480
           ++ + +TNS ++ IT  +SK FH+N+L C+N+T   + I+A   S+N++GIHIG S  +N
Sbjct: 193 IRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNGVN 252

Query: 481 VINTNIGIENDCISLGDRSKQVTITN 507
           +I   I   +DC+S+GD ++ + + N
Sbjct: 253 LIGAKIKTGDDCVSIGDGTENLIVEN 278

[Close]
BLAST of Spg019738 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 76.3 bits (186), Expect = 1.2e-13
Identity = 35/85 (41.18%), Postives = 58/85 (68.24%), Query Frame = 0 

Query: 420 TLKLSFITNSIVSDITLKHSKNFHVNVLGCENLTFQHVNINAVENSINSEGIHIGHSTRI 479
           +++  FI NS + DI+   +KNFH+NVLG +N+T  ++ I A E+S N++GIH+G S  +
Sbjct: 140 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 199

Query: 480 NVINTNIGIENDCISLGDRSKQVTI 505
            ++N+ I   +DCIS+GD  K + +
Sbjct: 200 KILNSFISTGDDCISVGDGMKNLHV 224

The following BLAST results are available for this feature:
BLAST of Spg019738 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022157387.14.4e-2673.56exopolygalacturonase-like [Momordica charantia] >XP_022159278.1 exopolygalacturo... [more]
XP_008459709.27.5e-2674.42PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
KAA0039364.17.5e-2674.42exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK00547.1 exopolygalactur... [more]
KAA0066598.16.0e-2370.93exopolygalacturonase-like [Cucumis melo var. makuwa] >TYK14219.1 exopolygalactur... [more]
KGN51148.11.3e-2262.24hypothetical protein Csa_009319 [Cucumis sativus][more]
BLAST of Spg019738 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P245481.5e-2159.30Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1[more]
Q403126.0e-1853.09Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1[more]
Q6H9K03.3e-1649.41Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S... [more]
Q059672.1e-1534.59Polygalacturonase OS=Nicotiana tabacum OX=4097 GN=PG1 PE=2 SV=1[more]
Q397661.8e-1442.86Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1[more]
BLAST of Spg019738 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DUC62.1e-2673.56exopolygalacturonase-like OS=Momordica charantia OX=3673 GN=LOC111024096 PE=3 SV... [more]
A0A5A7T7B33.6e-2674.42Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3CC083.6e-2674.42exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103498752 PE=3 SV=1[more]
A0A5A7VFS72.9e-2370.93Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A0A0KNH76.4e-2362.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G467920 PE=3 SV=1[more]
BLAST of Spg019738 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G07830.11.9e-1439.08Pectin lyase-like superfamily protein [more]
AT3G07840.14.1e-1439.08Pectin lyase-like superfamily protein [more]
AT3G07850.19.2e-1438.37Pectin lyase-like superfamily protein [more]
AT3G14040.11.2e-1338.37Pectin lyase-like superfamily protein [more]
AT3G07820.11.2e-1341.18Pectin lyase-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 390..530
e-value: 1.3E-19
score: 72.1
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 419..507
e-value: 5.2E-18
score: 65.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 241..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 620..663
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 198..214
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..196
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 285..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..645
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..89
NoneNo IPR availablePANTHERPTHR31375:SF132OS06G0509600 PROTEINcoord: 419..506
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 419..506
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 419..509

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019738.1Spg019738.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
molecular_function GO:0004650 polygalacturonase activity