Spg019723 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019723
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionnuclear speckle splicing regulatory protein 1-like
Locationscaffold5: 30241063 .. 30248102 (-)
RNA-Seq ExpressionSpg019723
SyntenySpg019723
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCGATCTCTCTCCCACTCGTTTCTGGTTATTTCCGCGAGCAGGGGTCTCCGGCGAAGGTGTTCAGCAGCAGATTTCGGCCAGATTGGACGTGATTCAGCGAGCTTTTGCATGGGCAGCGTCGTTTTGGGCGTTTCAGCGTGTTTCCGACAATTTTTAGGATTGGGTAAGAGAATTAAGTTAAGTTTTGGTGGATTTAAATGTTTTAGAAGAATACCCATTGATGTTAGCTTTCAATTTCAAGGTTATTCATATCTCTTTGATTTGATTATTCTTTATCTTCTGCTTTTGCACTTGTTCCGCAGCCCTAGATTTCGATTTCATTTTCTTTGTTTTCTTCAATTTCATTATTGCAAGTTCAGTAATAATCTCCTCTGGATTTTTTTTTTCATTTCCACCCGTGTTGTCCTAGACTCTGAATCCATATCAAACTGCTGTTGACCAAATTGGTAGGATCGAAGGATCGGAATAGAAATTGTACTGAAATACTTGAATAACAAACATATACATTCAAAATATCCCATCGCAACTTATAGAGATATCCTGCTGAGCAAAGTTGAAGCCAAAACAACCAAGTAATTACTTACTTGCCTTCACTCCTCTCAGTTACTCTATTTATAACCACTCCACTAAGAAACTACATCATTAAAAACTATAATACCGCCAATATCCTAGTAATATTTCTAATTTTCCCTAATTCTTAACATGCTCCTTTGTCCTTTCTTTCATTTAGCGCTCACATTGGATGATGTGAGTTAGGTGTCTTAGGCATTCAGTCATTTTCTGTCTGTATAATCTTTCCTTGAAGAAAATTGGTGTTTAATATGGAAGAATTTTTTGTATGCTTTATGCATCAATGAGTTACATTCAAGTTTTTTCACAGGAACAGTTAGAAGACAGTAAAAATGAGCAAGTATGGCCTGCAACTTAGGGTTAAGCCATCACAACAGAAGCAACCTACAAGACCACCCCTTCCTGCTCCTCTTGGATTTCAAGATGATGATGATAATGATGTTGAGAGAGAGATATCTCGCCAAGCTTCCAAGAATAAGGCGCTTAAGGATGTAAGCTCGCCTGTATATGACTATTTTTTTCTCCGTGTGTTTGTACTTTTTCCTTTACTGTTGACTATTTATTGAGCAAAGATAATGTCATTAACAAGAATCTCAAGGTTGTACACTAGCCTTAATTTTTTTTTTCCCCTGAAAAATCAATTTAGATTGAGGAGCAACACAAGAAAGCACTACAGGAGGATCCGTCAGTTTTTGACTATGATGGAGTCTATGATGAAATGAAAGAAAAGGCTGTTCAACCTAGAGCACATGATCGTGAAGAGAGAAAGGTATGTTCATATTTTGGTCCCAAAATTGCTTGGTTTCTTTGTTACCCTTCCAGATTTGTTCTCGAGGTTTAATCTATTTATTATGTATATGTATTTTTGAGAGATCTCAAGGTTTTAATTAATCAATAAAGTTTTATTTTTCTTAAGTTTCAATGTAATCTTTTACTTCTCAAAAAAAGGGTTTTAGGATTTGGCAGTTGTAGCTGTGAGCTGAACTCTATGATTTTGACCAACGGCTGGGTCTTTGTTTGATAACTTTTATGGCTGAGTTTGAGAATGGAAGTTGTTAAATGGTTCAATAATCGAGTTCTTGGAAACATGTTTAGAAAAACAAGGAGAAAAATACAAATAGATATTTTAATTTCAAAATATAAAAAGTAGGGAAAAATACCTTTTTGATTCTTGAGTTTTGAGGAATTGGCGCATTTGGTCCATAAGTTATCAAAATAGACCTTTTTAGTCCCTAAATTTTGAGAAATAGGTTTAAAAGGTTCCTAAGTTTTCAAGATGGACCTTTTTAGTCCTCAAGTTTTGAGAAATAGGTTTAAAAGGTTCCTCATATTATTTTTTAATTTTTTAAAAATTATTACTTTTTAACTTTTTTAATTTAAAAATCCATTCAATATTAAAAAATAATAAAAAAATATTAATTTAAAAAAGTTGAAAAAATAATATGAGGGACCTTTTAAACCTATTTCTCAAAACTTAAGGACTAAAAAGGTTCGTTTTGAAAACTTAGGGACCTTTTAAACCTATTTCTCAAAACTCATGAACTAAAAAGGTTTATTTTGAAAATTCAGGGACCAAAAAGGGTATTTTCCCCTAAAAAGTACTATAATTTCTGTTGCAGTTCACATGGAGTTGTAAACTTTAGTTTAGTCGTAACACAAAATGTTTGCTGGACAAAATGGTTATAACTTTATTTGGGATAATTGATGCAACACCTTTATTTAAAATAAATGAACGTAAACACAACTCTGATTCCTACTAGATTTCAACTAGGACTTATAATCCAATTAGAATTAGAATTAAAAAAAGCCCTAAACTTAACGACATAAAAATGAAGTCTTATAGAAAACCAAATATGTACAAAAATACATTATCACCCTAATCTAATCCTACTACCACTCTTGTGAAAACACTTATTTGGCTCACTGCTTTTCTGTTGCAGCCAAAGTATATTCAAAATTTGCTCAAAAAGGCACAAGAGCGAGAGAGAGAGCAGGAGATCATATATGAAAGAAAGCTGGCGAAGGAAAGAAGCAAAGATGATCATCTCTATGCTGGTAAGGACAAATTTGTCACTAGTGCCTACAAAAAGAAACTTGCAGAACAAGCAAAATGGATGGAGGAAGAGCGTCTCCGACAACTCCGGGAGGAGAAAGAGGATGTATGTATGATTTTCACTGTCTTTTTCTTTTTCTTTAATAAGTTAATAATTTAATAAATCTTAGTATTTATGAAATGCCTTCTATAGTGTCAAAATGAGCAAGTGTTATGTTTTATCATTTATTTTTATTAGAAAGTGTGGATTTTATCACAATTTCCCTGATTTTGGTAACTACTAGTTTGTTGATGTTCATGTAATATCCCACCCTTAGGCTATAGACGACATATCCCATATTTATCTTGTATGCTGAAGTACTCGAAAGCCAACTGGTTTCTATTGCATCCTCTAGGATTAAACCAGGTTATTTTACTGGTTTTGCAACCATGCTGATAAAAAAATGCTGATAAAAATAGTTTATTGCAAGCTTGTCTAGAAGCTAGTGGCTTTGGCGATTCCATCATGAAACCTATGGCTTGTGGTACAAAGGTTATTGTCAGCAAGTATGAGCCTCATCCTCTTGAGGACCTTTGGTGGGGTTAAAGGCACTTAGAAACTCATGGAGATATTTCAGTTGAGTACCCTATTTTTTCTCAATTTGTCCATAATGTGGTGGGTGATGATGGGAGGGATATTAATTTTTTTGGAAGATAAGGGGTTGGGGGATGTCCCTCTTTGATGAATCATTATGTGGCTTCCACTCTTCTAGTAACTAGGCCTCCCTCTCTTTGGGCTTTGTCGGCTGCTGACTAATAGGGAAACGACAAACGTTGTGTTTCTTCCCTCGTTGTTTGATGGCTTTAGTCTTTGTCCTAACAAGAGAGACATCTGTTCGTGGAGTCCTTGTCCCTCTGAAGGTTTGTTGTGCTCCTCTTTCTTTCATTGTTTGGCTAGTTTGTCCTTGGGGAGTGCATCGATTTTCTCCTCATTATGGAAGGTGAAGATTGAGAAGAAGGTTAGATTCTTTGCGTGGCAGGTTTTGCATGGTAGGGTTAATACCCGAGATTCGATCTCAGCTAGAGGGTTCTCTTTGGTTGGTCCGTTCTGTTGTATCCTTTAGGGAGGCTGAGGATCTGGATCACCTGCTTTGGAGTTGTGAGTTTGCTTGGGCTGTGTGGAGCTGCTTCTTTCAGGAGTTTGACTTTAACTTTGTTAGAGCTCAGGCTTTTATGGTGGCGTTCGAGGAGCTCCTTTATTCGCCCTTTCGTGAGAGAGGGTGCTTTTTGTGGCAGCTTGGGGTTTGTGCGATCCTAAGAAGCATGAATACAGACACGAGACACGAATACGACATGACATGGACACGATGACATGTCATTTTTTTAAAATCTAGGACACGAACACGAGATGGACACATTTAGTAAAATATACTTTTTTTTTACAAGAGTAAAATATACATTTTTAAAAATATATATCATTTTTATACAAGAAGGAAATTCAAAATCAATAAGTTTATGCATGAGTTTTAAAAAATGAGTTTAATGTATTTCACTCTTAAAATATTATTATTTTTCATTTATTATTGTGTCTATTTAGTATACTTAACAAGTGTTGAATATGGACTTATATTGACTTTGTACAACTAGTGTTTGCCACATATTAATTGTGTTAACAAGTATTCAATACGTGTTCAACAATTGTCAGAGTGTCCAAGTGTTTGACGCGGACATACTAGCCAAATTGAAGTGTCCGTGCTTCTTAGGTGCGATCTTATGGGGTCTTTGGGGGAAGAGAAACAACAAAATCTTCAAAGGGTGTGAGAGTTCTTGGCGCGATGTTTAGTCCCTTATTAGACTCTATGTTTCTCTTTGGGCCTTGGTGGCTAAGCCCTTTTGTAATTACACTTTAGGCCTTATTTTGCTTGATTTTTTGATAAAGAATCGAGCCTTCATTAAGAAAAATGAAAGAATACAAGGGCATCCAAAAACCCAAGCCCAAAAAGGAACCCAACTAAATGAAGGGTTTCCAATCAATCAGAATAAGACCTGGAGGATAATTACAAAAAGCCTTGGCAACCGAGACCCATAAAGAGACGTGAAACCTAATATTATCCCAAACCTCACAAGAATGTCTCTCGATCCCTCTAAAAGTTCTATTGTTTCTTTCCCCCCATAAACCCCACAAAATAGCACAAATGTCAGCATGCCAAAGGAACCTTCCTTTCTCCCGAAACGGTGGATGGAGGGGGCCATATTTTGCTTGATTGGAGTCCCTTTTTATAGTTCAACTCCCCTTTCTTTTTTTGTGGGTTTCCTTTTGTATGCCAGTGTATTCTTTCATTTTTTTTCTCAATGAAAGCTGAGTTTATTATAAAAAAGAAGTTTGTTTAGAAGCTAGCAGAGCACCCAAGGTTTTCTTTAAGGCTCTGACCACCTTTTTTGAGAAATAAGCATTGGGTCAGGAAACAGAAGGTGCATTCAGAAATTTAAACGGGCAGTTCTGGAAGTGGCTTTGCGTCCAAATAACCAACATAAGCTTCAATTTATTGGAGTTGGGGTTTTTGACCCATAAGACTCACCAAGAGCCTCATCTATATCTTAAATTATGAAGTTCCAGTCCCCATATTTAGTCTGTTTTATTTTATTTTATTTTTATAGGAAACAATTTCATTACCTAAACCAATGGAGCTACGAAAGATTTTTTCCAATTGGTCAAAAGAAAGGAGAGGCTATAAGAACTAAAATAAGAGGAGCATTTACACCAAGGCATAGCAAGAAAGATGATTTGTTCAAAATAACTAGCTAAAGTACTCTCCTTATCCTTGAAGAGGCCACCAATTATAAATACACATGTTAGGAGGAATAAGGGAGGAAATAAGGGATAGTTTGTTGAAAATATCACCAAACAGTTGGCTATAATTAAATATTCTGGCTGTTAGTATTCTATGTTTTTGTATTTTGGGCTGCTAGTAATTGGGAAATTAATCCCATGTCTTGATGATTGTGTCTTGGGTTTAGGAAGAGTCATTTAGTAAATATGTTGTCTTGAAAATGATCGAGTCTTTGTCTATTTAATAGTAAGAAAGAAGGGATATGAGGATCATGGAAAATACAGTGTAAGACATCAGTCTCGGAGAGAATTCAGCCCTCTCAAATTGGCTGATTATTCAGTAAAGAAAGAACTATTATTCCCTAGCACTTTCTGTTATTCAATTGTAAGAAATACCTTACATGAAGGAAACTCAAAATCAATAAATTTATGCATTTGTATGCTTGAAAAAATGAATTTAATGTATTTTACTCTTAAAATTTATTATTTTTGTCATTTAAGCATTGTTTCTGTTTAGTATACTTAACTAGGGTTCGAAATGAACCTACAACTAGTGTTTGCCACATATCAATTGTGCTAACAAGTATCCAATACGTGTCCAACAAGTGTCAGAGTGTCCAAGTGTCGGACACGGACATGCTAACCAAACTAAAGTATCCGTGCTTCTTAGGCTTTATGCTTTCATCAATGTGTGTTTTCCATCGACAGCAAAATAGATGATTGTTCTTTTTGTACTAATTTGAAGGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTATGGTGCCGCAAATGCAGTCAAGCCAAGGGAACCTCCGAAGAAGCTTCAGCCAGAGAAGCAAGAGAAGCAGACTGAAGTCCCGAAATTGGAGAAGCATGAAGAGAGTGCTAATGCTGATGCCTTTGATAACCAACAGTCGTTGAAATACTCCAATTTACCTTCCCAGTCAGCCAAGACGTTAGAAGAGCATTCTCATCTTGAAGAAGAAGACCTTTCAGTTTCAAACAAAACAACACCATCTGATGTACTGCGAGGTACTAGCCCCCCTTCATTACATGATAAAACTTCAGTTGAGGAACAACCCAAGCAGGACGAAGGTGAACAACAACCAAAGCGCGACCATCATAAAAGAAGTGAAGATGCTGTTGCTGCTGCTAAAGAGCGCTTTTTGGCTCGAAAAAGAGCAAAGGAGGTGTGAAATACTTGTTGGTCTAGATTAAACTGAGGACAAATATGTAAATGTTACTGTTGTATCGAGGATAGTTGATAATTATGTTCTTAATGCTGAAGCTCATCTTTGAGCTTCGGCTGTGACTTACACATTTATTCACTGTGGTCCATGTGAGAGATTCCTTGTGTTGATGACTAGGAGACCTACAGAGGAAGCCCGAAGAACTAGCTGCTCAAAGTTCAACTTTTGTGTCATCAATTGGCAAATGCTATAAATTTAGGTTGTTAAATGGCCCCCACACCAGTTTTTTGGCTCACATTTCCTTGAAACTTGCACGTGATGATTGCACAGGATGCATGAACATACAAGCGTGTTTTATTCTTGCATTAAATGAAGATGGCATGCCGT

mRNA sequence

ATGAAACCTATGGCTTGTGGTACAAAGGTTATTGTCAGCAAGTTTTGCATGGTAGGGTTAATACCCGAGATTCGATCTCAGCTAGAGGGTTCTCTTTGGTTGGTCCGTTCTGTTGTATCCTTTAGGGAGGCTGAGGATCTGGATCACCTGCTTTGGAGTTGTGAGTTTGCTTGGGCTGTGTGGAGCTGCTTCTTTCAGGAGTTTGACTTTAACTTTGTTAGAGCTCAGGCTTTTATGGTGGCGTTCGAGGAGCTCCTTTATTCGCCCTTTCGTGAGAGAGGGTGCTTTTTGTGGCAGCTTGGGGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTATGGTGCCGCAAATGCAGTCAAGCCAAGGGAACCTCCGAAGAAGCTTCAGCCAGAGAAGCAAGAGAAGCAGACTGAAGTCCCGAAATTGGAGAAGCATGAAGAGAGTGCTAATGCTGATGCCTTTGATAACCAACAGTCGTTGAAATACTCCAATTTACCTTCCCAGTCAGCCAAGACGTTAGAAGAGCATTCTCATCTTGAAGAAGAAGACCTTTCAGTTTCAAACAAAACAACACCATCTGATGTACTGCGAGGTACTAGCCCCCCTTCATTACATGATAAAACTTCAGTTGAGGAACAACCCAAGCAGGACGAAGGTGAACAACAACCAAAGCGCGACCATCATAAAAGAAGTGAAGATGCTGTTGCTGCTGCTAAAGAGCGCTTTTTGGCTCGAAAAAGAGCAAAGGAGGTGTGA

Coding sequence (CDS)

ATGAAACCTATGGCTTGTGGTACAAAGGTTATTGTCAGCAAGTTTTGCATGGTAGGGTTAATACCCGAGATTCGATCTCAGCTAGAGGGTTCTCTTTGGTTGGTCCGTTCTGTTGTATCCTTTAGGGAGGCTGAGGATCTGGATCACCTGCTTTGGAGTTGTGAGTTTGCTTGGGCTGTGTGGAGCTGCTTCTTTCAGGAGTTTGACTTTAACTTTGTTAGAGCTCAGGCTTTTATGGTGGCGTTCGAGGAGCTCCTTTATTCGCCCTTTCGTGAGAGAGGGTGCTTTTTGTGGCAGCTTGGGGTTACCAAGAAGAGCGACATTAGCGACTTTTACTTCAACCTTCAAAAGAATATTGCCTATGGTGCCGCAAATGCAGTCAAGCCAAGGGAACCTCCGAAGAAGCTTCAGCCAGAGAAGCAAGAGAAGCAGACTGAAGTCCCGAAATTGGAGAAGCATGAAGAGAGTGCTAATGCTGATGCCTTTGATAACCAACAGTCGTTGAAATACTCCAATTTACCTTCCCAGTCAGCCAAGACGTTAGAAGAGCATTCTCATCTTGAAGAAGAAGACCTTTCAGTTTCAAACAAAACAACACCATCTGATGTACTGCGAGGTACTAGCCCCCCTTCATTACATGATAAAACTTCAGTTGAGGAACAACCCAAGCAGGACGAAGGTGAACAACAACCAAAGCGCGACCATCATAAAAGAAGTGAAGATGCTGTTGCTGCTGCTAAAGAGCGCTTTTTGGCTCGAAAAAGAGCAAAGGAGGTGTGA

Protein sequence

MKPMACGTKVIVSKFCMVGLIPEIRSQLEGSLWLVRSVVSFREAEDLDHLLWSCEFAWAVWSCFFQEFDFNFVRAQAFMVAFEELLYSPFRERGCFLWQLGVTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV
Homology
[Close]
BLAST of Spg019723 vs. NCBI nr
Match: XP_038877232.1 (nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877234.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_038877235.1 nuclear speckle splicing regulatory protein 1-like [Benincasa hispida])

HSP 1 Score: 219.9 bits (559), Expect = 2.5e-53
Identity = 125/157 (79.62%), Postives = 136/157 (86.62%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDI+DFYFNLQKNIAYGA NA++PREPP KL  EKQEKQTEV   EKHEE ANAD 
Sbjct: 168 VTKKSDITDFYFNLQKNIAYGARNAIEPREPPNKLLSEKQEKQTEVHISEKHEEGANADT 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
           F++ QSLKYSNLPSQSAKT EEH  LEE  LSVSNKTTPSDV RG SP ++ +KT VEEQ
Sbjct: 228 FNDHQSLKYSNLPSQSAKTREEHPRLEEH-LSVSNKTTPSDV-RGNSPRTICNKTPVEEQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKE 259
           PK ++GEQQPKRDHHKR+EDAVAAAKERFLARKRAKE
Sbjct: 288 PKHEQGEQQPKRDHHKRNEDAVAAAKERFLARKRAKE 322

[Close]
BLAST of Spg019723 vs. NCBI nr
Match: XP_022142663.1 (nuclear speckle splicing regulatory protein 1-like [Momordica charantia])

HSP 1 Score: 216.1 bits (549), Expect = 3.6e-52
Identity = 124/158 (78.48%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIA+GA NAVK REPPK+LQ E+QEK +EV +LEKHEESANAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAFGAENAVKSREPPKQLQSEEQEKHSEVRELEKHEESANADT 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            +N QS K SNLPSQSAK +EEH    EED  VSNKTTPSDV    SPPSLHDKTSV+EQ
Sbjct: 228 SNNSQSSKQSNLPSQSAKMVEEH---PEEDFLVSNKTTPSDV----SPPSLHDKTSVQEQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           PK  +GEQQPKRDHHKRSEDAV AAKERFLARKRAK+V
Sbjct: 288 PKHGQGEQQPKRDHHKRSEDAVTAAKERFLARKRAKDV 318

[Close]
BLAST of Spg019723 vs. NCBI nr
Match: XP_022927406.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_022927407.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 4.0e-51
Identity = 122/158 (77.22%), Postives = 135/158 (85.44%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ EV KL+KHEESANAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESANADI 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPSDV RGTSPP LH++T VE+Q
Sbjct: 228 VNDHQSPKYPSSPSQSAKTIEQDRHLEEH-LSNSNKTTPSDV-RGTSPPPLHNRTPVEKQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           P+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Sbjct: 288 PEHDQGEQQPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

[Close]
BLAST of Spg019723 vs. NCBI nr
Match: XP_023520694.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 212.2 bits (539), Expect = 5.2e-51
Identity = 122/158 (77.22%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ EV KL+KHEES NAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESVNADI 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPSDV RGTSPP LH+KT VE+Q
Sbjct: 228 VNDHQSPKYPSSPSQSAKTIEQDRHLEEH-LSNSNKTTPSDV-RGTSPPPLHNKTPVEKQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           P+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Sbjct: 288 PEHDQGEQQPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

[Close]
BLAST of Spg019723 vs. NCBI nr
Match: XP_022973152.1 (nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973153.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973154.1 nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima])

HSP 1 Score: 209.1 bits (531), Expect = 4.4e-50
Identity = 120/158 (75.95%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ +V K++KH ESANAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQ---SEKQADVQKMKKHGESANADI 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPSDV RGTSPP LH+KT VE+Q
Sbjct: 228 VNDHQSPKYPSSPSQSAKTIEQDRHLEEH-LSNSNKTTPSDV-RGTSPPPLHNKTPVEKQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           P+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Sbjct: 288 PEHDQGEQQPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

[Close]
BLAST of Spg019723 vs. ExPASy TrEMBL
Match: A0A6J1CNT9 (nuclear speckle splicing regulatory protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012717 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 124/158 (78.48%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIA+GA NAVK REPPK+LQ E+QEK +EV +LEKHEESANAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAFGAENAVKSREPPKQLQSEEQEKHSEVRELEKHEESANADT 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            +N QS K SNLPSQSAK +EEH    EED  VSNKTTPSDV    SPPSLHDKTSV+EQ
Sbjct: 228 SNNSQSSKQSNLPSQSAKMVEEH---PEEDFLVSNKTTPSDV----SPPSLHDKTSVQEQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           PK  +GEQQPKRDHHKRSEDAV AAKERFLARKRAK+V
Sbjct: 288 PKHGQGEQQPKRDHHKRSEDAVTAAKERFLARKRAKDV 318

[Close]
BLAST of Spg019723 vs. ExPASy TrEMBL
Match: A0A6J1EHK7 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111434242 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.9e-51
Identity = 122/158 (77.22%), Postives = 135/158 (85.44%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ EV KL+KHEESANAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQ---SEKQAEVQKLKKHEESANADI 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPSDV RGTSPP LH++T VE+Q
Sbjct: 228 VNDHQSPKYPSSPSQSAKTIEQDRHLEEH-LSNSNKTTPSDV-RGTSPPPLHNRTPVEKQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           P+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Sbjct: 288 PEHDQGEQQPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

[Close]
BLAST of Spg019723 vs. ExPASy TrEMBL
Match: A0A6J1I6R6 (nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471664 PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.1e-50
Identity = 120/158 (75.95%), Postives = 134/158 (84.81%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSDISDFYFNLQKNIAYGA NAV+PREPP+KLQ    EKQ +V K++KH ESANAD 
Sbjct: 168 VTKKSDISDFYFNLQKNIAYGAGNAVEPREPPQKLQ---SEKQADVQKMKKHGESANADI 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
            ++ QS KY + PSQSAKT+E+  HLEE  LS SNKTTPSDV RGTSPP LH+KT VE+Q
Sbjct: 228 VNDHQSPKYPSSPSQSAKTIEQDRHLEEH-LSNSNKTTPSDV-RGTSPPPLHNKTPVEKQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           P+ D+GEQQPKRDHHKRSEDAVAAAKERFLARKR KEV
Sbjct: 288 PEHDQGEQQPKRDHHKRSEDAVAAAKERFLARKRTKEV 320

[Close]
BLAST of Spg019723 vs. ExPASy TrEMBL
Match: A0A0A0LJE9 (DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=3 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.5e-48
Identity = 115/158 (72.78%), Postives = 130/158 (82.28%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSD+SDFYF+LQKN+AYGA NA++P  PPKKLQ EK+EKQTEV  LEKHEES N D 
Sbjct: 168 VTKKSDMSDFYFSLQKNVAYGARNAIEPTAPPKKLQLEKKEKQTEVHILEKHEESCNGDT 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
           F N   L+ SNLPS S KT+EEH HLEE  L  SNKTTPS++  GTSPP+LHDKT V+EQ
Sbjct: 228 F-NDHLLQNSNLPSCSEKTIEEHPHLEER-LPFSNKTTPSNI-EGTSPPTLHDKTPVQEQ 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           PK ++ EQ PK DHHKR+EDAVAAAKERFLARKRAKEV
Sbjct: 288 PKHEQSEQPPKSDHHKRNEDAVAAAKERFLARKRAKEV 322

[Close]
BLAST of Spg019723 vs. ExPASy TrEMBL
Match: A0A1S4E1R3 (nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492150 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.6e-45
Identity = 111/158 (70.25%), Postives = 128/158 (81.01%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKKSD+SDFYF+LQKN+AYGA NA++PR  PKKLQ EK+EKQTEV  LEKHEES N D 
Sbjct: 168 VTKKSDMSDFYFSLQKNVAYGARNAIEPRATPKKLQLEKKEKQTEVHILEKHEESCNGDT 227

Query: 162 FDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLHDKTSVEEQ 221
           F++ Q         Q++KT+EEHSHLEE  LS SNKTTPSD+  GTSPP+LHDK  V+E+
Sbjct: 228 FNDHQ--------LQNSKTIEEHSHLEER-LSASNKTTPSDI-EGTSPPTLHDKALVQER 287

Query: 222 PKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAKEV 260
           PK +  EQ PKRDHHKR+EDAVAAAKERFLARKRAKEV
Sbjct: 288 PKHELSEQPPKRDHHKRNEDAVAAAKERFLARKRAKEV 315

[Close]
BLAST of Spg019723 vs. TAIR 10
Match: AT2G27285.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09
Identity = 65/164 (39.63%), Postives = 83/164 (50.61%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEE------ 161
           VTKK D+SDFYFN+ KN+A+G A  V+ +E  K  +  K EK  E  K EK EE      
Sbjct: 168 VTKKKDLSDFYFNIGKNVAFG-AREVEAKEAEKLEEQRKAEKLEEQRKAEKLEELRKEVT 227

Query: 162 --SANADAFDNQQSLKYSNLPSQSAKTLEEHSHLEEEDLSVSNKTTPSDVLRGTSPPSLH 221
                  + + + S       S  +K+LE    LE E  +VS K   SD   GT      
Sbjct: 228 RVEKKRKSPEKEVSPDSGEFGSSRSKSLEP---LEAEQ-AVSEKEMGSD---GTEERKSS 287

Query: 222 DKTSVEEQPKQDEGEQQPKRDHHKRSEDAVAAAKERFLARKRAK 258
            K + +E PK    +        KR EDA+AAAKERFLARK+AK
Sbjct: 288 IKEAAKEVPKAINDQ--------KRREDAIAAAKERFLARKKAK 315

[Close]
BLAST of Spg019723 vs. TAIR 10
Match: AT1G55928.1 (Coiled-coil domain-containing protein 55 (DUF2040) )

HSP 1 Score: 43.5 bits (101), Expect = 3.0e-04
Identity = 35/104 (33.65%), Postives = 57/104 (54.81%), Query Frame = 0 

Query: 102 VTKKSDISDFYFNLQKNIAYGAANAVKPREPPKKLQPEKQEKQTEVPKLEKHEESANADA 161
           VTKK D+SDFYFN+ KN+A+GA + +K RE       E+ ++Q +VPKLE+  E    ++
Sbjct: 175 VTKKKDLSDFYFNIGKNVAFGARD-IKARE------TERLKEQRKVPKLEELREKMKTES 234

Query: 162 FDNQQSLKYSNLPS--QSAKTLEEHSHLEEEDLSVSNKTTPSDV 204
            +        ++ S  +    L+E  H+  E+   S+ T   D+
Sbjct: 235 PERVVLPDSRDIGSSCRIIVELQEAEHVASEEKMNSDATEERDL 271

The following BLAST results are available for this feature:
BLAST of Spg019723 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038877232.12.5e-5379.62nuclear speckle splicing regulatory protein 1-like [Benincasa hispida] >XP_03887... [more]
XP_022142663.13.6e-5278.48nuclear speckle splicing regulatory protein 1-like [Momordica charantia][more]
XP_022927406.14.0e-5177.22nuclear speckle splicing regulatory protein 1-like [Cucurbita moschata] >XP_0229... [more]
XP_023520694.15.2e-5177.22nuclear speckle splicing regulatory protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022973152.14.4e-5075.95nuclear speckle splicing regulatory protein 1-like [Cucurbita maxima] >XP_022973... [more]
BLAST of Spg019723 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg019723 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CNT91.7e-5278.48nuclear speckle splicing regulatory protein 1-like OS=Momordica charantia OX=367... [more]
A0A6J1EHK71.9e-5177.22nuclear speckle splicing regulatory protein 1-like OS=Cucurbita moschata OX=3662... [more]
A0A6J1I6R62.1e-5075.95nuclear speckle splicing regulatory protein 1-like OS=Cucurbita maxima OX=3661 G... [more]
A0A0A0LJE94.5e-4872.78DUF2040 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070270 PE=... [more]
A0A1S4E1R31.6e-4570.25nuclear speckle splicing regulatory protein 1-like isoform X2 OS=Cucumis melo OX... [more]
BLAST of Spg019723 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27285.11.1e-0939.63Coiled-coil domain-containing protein 55 (DUF2040) [more]
AT1G55928.13.0e-0433.65Coiled-coil domain-containing protein 55 (DUF2040) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..180
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..259
NoneNo IPR availablePANTHERPTHR30060:SF0COILED-COIL PROTEIN (DUF2040)-RELATEDcoord: 102..258
NoneNo IPR availablePANTHERPTHR30060INNER MEMBRANE PROTEINcoord: 102..258

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019723.1Spg019723.1mRNA