Spg019677 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg019677
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Reverse transcriptase domain-containing protein
Location	scaffold5: 35839050 .. 35844676 (-)
RNA-Seq Expression	Spg019677
Synteny	Spg019677

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGGGTTTAGGTTGTCGGAGAGAATCGAAAACAAGTCCTTCTCTATTTCCTTCGATTCGGAGAAGAGAGGAAGATATGTCAAGATCGTGGAGCATCATGGACGCGTAACTTTCGAGGTCTCGATAGAAGAAATAGCAACGGTTTGGATTGCGGATAATATTGAAGATCTTCTCCTTTCCCCGAAAACGCAAAAATTCTTTAGGAAAACGGACTGCAACGGAGGCTTCCTGTGGATTCAAAAAACAGCAAACAAAAGAGGTGACTTCTTAGAAGTGATGAAGGTTCAAAGTTCGGGAGGAAAGCGAAATCTGGTCATCCCCGCAGACTTGGAATTCAATGGATGGAAGTCTTTTCGTAGGTTATTAATGAACTTTATGAATGGCCAAGGGGATGAAGAGAAAGAAAAAGAAAAGTTGGTGTTGGATGGCAAAAAGAAGACGAGCAGATCTTTCGCTGAAGCCCTGAGGGGGGAACCCTCGGGGGGAGCCCATAGTAGATGCTTGAAGAGCGTGAAATCATCGAACTTCCAGGACCTTTGGACGCAGGAAGCTGGTGAGACGGATGTTCGTGGTATAAACTAGAATGAGACTATTGTCATCACTAGAAGAGATTTTCATGAAGACTGGGGGAGGATTCTTGACACAATCCAAAAGCAAACTCAACAGACATACATTATTAACCCATTTCTTCCCGACAAAGCCTTGCTTAAATGCCCCACTGGTGATATGGCTCGTCTGCTTACAACAAACAGGGGATGGGTTACCTTCGGTCCTCTGACAGTGAAAGTTGAATATTGGAACCCAATTATTCATGGAAAATCTTCCGTTATTCCCTCTTATGGGGGGTGGATTAGATTTAGGAACATTCTTCTGCATTTATGGAACTTGGCCACATTTAAAGCAATTGGGGATATGTTTGGGGGCTTCATTGATTACGCACAGGCCAACTCGAATCTCATTGAATGTATGGGAGTGGCTATAAAGGTTCGAGGAAATTATTGTGGATTCATTCCCTCGGAAGTTTGTCTGATAGATAGGGATCAAACCTTCGTTGCCCGTGTAGTTTCTTTTGAGAACCACAACCTTCTGATCGGAAAAGAGGTCGGGAAACATGGCGGATTCTCGCCGGAGGCGGCGAGGAGTTTTTTTGGGTCGGAGATGGGCTACGGCCCAAACCTAGTGGACTTTGGCGTGTTCAAGATGGGATCTTTTGTCCAGCAGTTAACATCATGTACCCCTGTCCCACTTTGGGTAATGTGATGGGCGCCAATCCAAATTTTCAAATAGAGGTCAAGGAAGGCTCTGGTCGTACTTCAAGGGATAATCAGAACTCTCCCATGGGACCCACCCAGGCGACTACAGTCCAAAAAGACGCTCTGCCCAAGGAGAACCCCACCCCGAAACCTGGACTCCAATCGAAAAAGAAAAAGAAGAAAGGGAAAGCGGTGGCTTTTGAGAAAGGCTCCAACTCCCAACCTTCCATGAAAAGGGGGTAAATCTTCTCGACAAGTCCAGCTGAGAGATGTGTAGAAAAGGAGTTAGAAATCGGTTCAGAGGCTTCTTTCTTGAGCATTAGTAGTGTGGAAGAGTGTCCAAGAAAAGATGCTGAAGAGCCTATTGTTGAAAAGGAAGATCCTCCTTCGGAGTTCTACATGTGTTTTAGAGAAGATGAGTTGCAGGATCTTATGGTGGGTGAAGAGAGAGCCATGATTCCAGTTCAGCCTCAGGTAGAGTTAGGAGATTTTCCCTCTTTAGCTATCAGAGACCAGCTGGAAGAAATCGGGTCAGAAGGGGAGGGGGATTTTCCGTTCTCTAGGCAAATGGTGAAGAATCTAAAGAAATGGAACATGTGTATTAGACCAATCTCTACCAAGGGAAGCACGACGGTTAAGAAAAAGTCGAGGGAGGTCACGAATTAGATCCGGGCTTGGGAGAAGGAGATGATCGATGAGAATATTAGCGTAGAGCAGGGCCTCATGGTTCCTTTATGAAGATTTTCTCCTGGAATGTGAGGGGGATTGGAGCTCCTCCCAAAAGAGCTCTGATAAAAAATTTCCTTTCTAAGCTTTATCCGGATGTGGTGCTGCTGCAGGAGACTAGATTGAATTCGATGAATAGGCGGCTTGTTAAATCTATTTGGAGTGCCAAGTGCATAGGGTGGGTGGCCTTAGATGCTGTGGGCTCGGCTGGAGGCGTGCTGGTTTTATGGAAAGAAGATGTCATCTCGGTAGTAGATTCGATTTTGGGTGAGTACTCCATCTCTATCTCTTTCTCGTTTGAAAATTGGTTTTCTGGTTGGATTTCAGGTGTCTATGGGCCAGCTTCGAATCAGGGAAGGGACATTTTTTGGCAGGAGTTGATGACTTGGCAGGTCTCTGTTTGGATTTATGGTGTTTAGCCGGCGACTTCAATGTGGTCAGATGGATTTCGGAAAAATCTAAGGGAGGGAGAATTACTAGAAACATGAAGACTTTCAATTCCTTCATAGACTGGGCAGAGCTCATAGATATCCCCATGAAAAACGGTAGATTCACTTGGTCTGACTTGAGGGAGGAGCCTACAGCCACTAGGATTGACAGGTTTTTGATATCCCACTCTTGGCTTACTGCTTTTAAAGAGATGTCCCTCCAAAAGCTGTCGAGACCCACTTCTGATCACTTTCCTCTGCTCCTTTCTTTGGGTAGTCAAGCTTGGGGTCCCTCCCCTTTCCGTTTTGAAAATGTGTGGCTTGAACACCCGAACTTTATGAATATTTTAAGAGATTAGTGGACTGAGATGAACCATGTCGGCTTTCCTGGTTATGTGTTCATGGAAAAGCTTAAAGGCATCAAAAATCATTTGATCAAGTGGAACAAGGATACTTTTGGCCATATTGTTCCATTATGGAGAGGATTGATGATATAGATAAGTTAGAGGAAAATGGGGGCATGTCCAGTGGCTTGCTTACTGAAAGAAGTAGTTTAAAAGCTGATCTTATGAGCATAGTCCTTCAGGAGCAACAAATGCTTTTGCAGAAATGTAAACTTCAGTGGCTGAAAGATGGGGATGAGAACAACAATTTTTTCCATAGATGGATGACGGTTAGAAAGAACAAAATGAAGATCAGCTTTCTAGAAGATCAAAGAGGCAATCTCTTAACCTCAGAAAAAGACATAGAGGAGGAGATTTTGCTTTTCTTCTCCAAGCTCTATGCTGAGCCGAGGGGCCAAAGGATGGAGGTGTTGGATATGGAATGGTCTCCCATCCAAAGTCAGGAGGCTGCGGGCTTAGAAGCTCCTTTTACGGAAGAAGAGATTCAAAAGGCGATCCTTAGCTTGGGAAATTTGAAGTCTCCAGGTTCTGACGGCATGACTAATGAATTTTTTAAAAAGTCTTGGAACATCTTGAAATCTGATCTAGTAAAGGTGTTCCAGGACTTTTTTGAAAAAGGTATCATCAACAAGAAGACAAATGAGACTTATGTTTGCCTGATTCCTAAGAAGCTTAAAGGCAATAAGGTGGGTGATTTTTGTCCTATTAGCCTAGTCTCCTCCTTGTATAAAATTATTTCCAAGGTGCTGGCAGAAAGACTTAAAAGGGTGCTTCCTAACACCATTGACAATACCCAAACCGCTTTTATTGAAGGGCGGCAGATCCTTGATGTTGTTCTTGTTGCCTCTGAATCTGTGGGGGACTGTATTGCTAACAAGAAAAAGGGGATCCTCTTAAAGCTCGATTATGAGAAGGCCTATGATAAAGTTGATTGGGATTACTTGGACCATATTCTGGACAAAAAGGGTTTTGGTTGCAGATGGAGGAATTGGATAAAGGGGTGCCTGTCTACGGCAAACTTTTCTATATTTATCAATGGGAGACCTCAAGGCAAGATTGTGGCTAGGAGGGGGCTTAGGCAAGGGGGCCCTTTATCCCCTTTCCTCTTCACGTTGATGGGGGACTCTTTTAGCAGATTGATTCACTTTTGCTGCGAAAGAAGAATTCTGAAAGGTATCCAAGTAGGTAACGGGGGGGTCAAGATCACTCACCTTCAATATGCTGATGATACAATTGTTTTTAGCCCGGCTAAGAAGAAGTTCCTATATAGATGGTGGATGATTATATCTCTTTTCCTCCAGATATCGGGCCTTTCTCTTAATGTCTCGAAAACCTCCATTATCGGCCTAAATGTGAATGAGAGGTGGATGTCTGAGTTTGCTGATAGAGTGGGGTGTAGAGTGGAGAAGCTGTCGTGCAACTATTTGGGTTTCCCCCTGGGGGAATCACAGATCTCTTGCTTTTTGGGACCCAGTTATTGAAAAGTTCAAGTTGAAGCTGGACAAATGGAAATTCATTCCTATTTCGAAAGGGGGAAGATTGACTTTGGCCCAATCTGTTTTAAACAGCATCCCTGTGTATTATTTTTCCATCCTCAAAGCTCCTGTGGGAGTCATTAAGCAGATGGAGAAGTTGGTTAGAGATTTTTTTTGGGCAGTGGAGGGAGTCATGGATGCAGCCACCTTGTAAATTGGGATAAAACTTCCCTCCCTATGAATTTTGGAGGCCTCGGTATTGGAGCTTACAAACAGAAAAATAGCGCCTTACTGTTGAAATGGATGTGGCGTTTTAGTCAGCTTGAAGATGCTCTTTGGAGGAAAGTCGTGGTGAGTATCTATGGTATAGACCAGAGAGGGTGGAGCTCCCTTCCCCCGAAAGGTAAAGCTAGAGGAAGACCCTGGTTCGATATCATGAAAACGGGCATATGGTTCATTAATTTCATCAGTTTTAAGGTTAATAAGGGTGATAAGGTTCTTTTTTGGAAAGATAGATGGATTGGGAATGATACGCTAGCCTCTTCCTTCCCAGATTTGTTTAACATCTCTATTAAGAAAAATGCCACGGTGGATCAATGTTGGAACTCAGATTCGATGGACTGGGACTTGGGATTCAGAAGAGGCCTCTTTGATTGGGAGATCACCAGTTGGATTGGGCTGATTGAGAGGATTGATGTTGTTCGCCTAGGGGATGGTAGTGATAAATCTCTATGGTGCCTTGAAAAATCCGGAATTTTTTCTTCAAGATCTGCTTTCTTAAAGTTGGCAGAAGTGAGTCCTACCCTCAAAACCCCCTTGATCAAGTACATTTGGAAGAATTGTGCTCCTAGGAAGGTCAAGGTCTTCCTTTGGCCCCTTGCCCACAGAAGCCTCAATACCCTTGACCTTCTTCATAAGAAATGCAGCAACTGGGTGTTATCCCTGTTGGTCTGTTCTTTGTGTTGGAGGAATGTTGAGTCTCTAGACCATACATTTCTCCACTGCCCTTTTGCTTGTGCGGCTTGGAGGTGGCTGTTGGGGGAATTTAACATTCATGTTTCTTTTCCTGAGAAGATTGATCATTGGATGGATGAAGTGTTTTCGGGCTGGAATTTTAGAGGTAGAGGGAAGATCTTGTGGAGTATGGCTGCGAGAGCTTTGATGTGGAACCTTTGGCTTGAGAGAAACCGTCGGGTCTTCGAAGATAAGAGTTCTCCGTTTGATTACTTTTGCTCTAATATTAAATATACTGCGTCGTGGTGGTGTACAAAGCACAAGAAATTCTTTTGTAATTACAGCTTGTCCATGATTGTTTCTAACTGGACTGCCTTTGTTTAG

mRNA sequence

ATGGGGGGGTTTAGGTTGTCGGAGAGAATCGAAAACAAGTCCTTCTCTATTTCCTTCGATTCGGAGAAGAGAGGAAGATATGTCAAGATCGTGGAGCATCATGGACGCGTAACTTTCGAGGTCTCGATAGAAGAAATAGCAACGGTTTGGATTGCGGATAATATTGAAGATCTTCTCCTTTCCCCGAAAACGCAAAAATTCTTTAGGAAAACGGACTGCAACGGAGGCTTCCTGTGGATTCAAAAAACAGCAAACAAAAGAGGTGACTTCTTAGAAGTGATGAAGGTTCAAAGTTCGGGAGGAAAGCGAAATCTGGTCATCCCCGCAGACTTGGAATTCAATGGATGGAAGTCTTTTCGTAGGTTATTAATGAACTTTATGAATGGCCAAGGGGATGAAGAGAAAGAAAAAGAAAAGTTGGTGTTGGATGGCAAAAAGAAGACGAGCAGATCTTTCGCTGAAGCCCTGAGGGGGGAACCCTCGGGGGGAGCCCATAGTAGATGCTTGAAGAGCGTGAAATCATCGAACTTCCAGGACCTTTGGACGCAGGAAGCTGGTGAGACGGATGTTCGTGCCTTGCTTAAATGCCCCACTGGTGATATGGCTCGTCTGCTTACAACAAACAGGGGATGGGTTACCTTCGGTCCTCTGACAGTGAAAGTTGAATATTGGAACCCAATTATTCATGGAAAATCTTCCGTTATTCCCTCTTATGGGGGGTGGATTAGATTTAGGAACATTCTTCTGCATTTATGGAACTTGGCCACATTTAAAGCAATTGGGGATATGTTTGGGGGCTTCATTGATTACGCACAGGCCAACTCGAATCTCATTGAATGTATGGGAGTGGCTATAAAGGTTCGAGGAAATTATTGTGGATTCATTCCCTCGGAAGTTTGTCTGATAGATAGGGATCAAACCTTCGTTGCCCGTGTAGTTTCTTTTGAGAACCACAACCTTCTGATCGGAAAAGAGGTCGGGAAACATGGCGGATTCTCGCCGGAGGCGGCGAGGAGTTTTTTTGGGTCGGAGATGGGCTACGGCCCAAACCTAGTGGACTTTGGCGTGTTCAAGATGGGATCTTTTGTCCAGCAGTTAACATCATGTACCCCTGTCCCACTTTGGAACTCTCCCATGGGACCCACCCAGGCGACTACAGTCCAAAAAGACGCTCTGCCCAAGGAGAACCCCACCCCGAAACCTGGACTCCAATCGAAAAAGAAAAAGAAGAAAGGGAAAGCGGTGGCTTTTGAGAAAGGCTCCAACTCCCAACCTTCCATGAAAAGGGGTGTGGAAGAGTGTCCAAGAAAAGATGCTGAAGAGCCTATTGTTGAAAAGGAAGATCCTCCTTCGGAGTTCTACATGTGTTTTAGAGAAGATGAGTTGCAGGATCTTATGGTGGGTGAAGAGAGAGCCATGATTCCAGTTCAGCCTCAGGTAGAGTTAGGAGATTTTCCCTCTTTAGCTATCAGAGACCAGCTGGAAGAAATCGGGTCAGAAGGGGAGGGGGATTTTCCGTTCTCTAGGCAAATGGTGAAGAATCTAAAGAAATGGAACATGGGGATTGGAGCTCCTCCCAAAAGAGCTCTGATAAAAAATTTCCTTTCTAAGCTTTATCCGGATGTGGTGCTGCTGCAGGAGACTAGATTGAATTCGATGAATAGGCGGCTTGTTAAATCTATTTGGAGTGCCAAGTGCATAGGGTGGGTGGCCTTAGATGCTGTGGGCTCGGCTGGAGGCGTGCTGGTTTTATGGAAAGAAGATGTCATCTCGCTTGAAGATGCTCTTTGGAGGAAAGTCGTGGTGAGTATCTATGGTATAGACCAGAGAGGGTGGAGCTCCCTTCCCCCGAAAGGTAAAGCTAGAGGAAGACCCTGGTTCGATATCATGAAAACGGGCATATGGTTCATTAATTTCATCAGTTTTAAGGTTAATAAGGGTGATAAGGTTCTTTTTTGGAAAGATAGATGGATTGGGAATGATACGCTAGCCTCTTCCTTCCCAGATTTGTTTAACATCTCTATTAAGAAAAATGCCACGGTGGATCAATGTTGGAACTCAGATTCGATGGACTGGGACTTGGGATTCAGAAGAGGCCTCTTTGATTGGGAGATCACCAGTTGGATTGGGCTGATTGAGAGGATTGATGTTGTTCGCCTAGGGGATGGTAGTGATAAATCTCTATGGTGCCTTGAAAAATCCGGAATTTTTTCTTCAAGATCTGCTTTCTTAAAGTTGGCAGAAGTGAGTCCTACCCTCAAAACCCCCTTGATCAAGTACATTTGGAAGAATTGTGCTCCTAGGAAGGTCAAGGTCTTCCTTTGGCCCCTTGCCCACAGAAGCCTCAATACCCTTGACCTTCTTCATAAGAAATGCAGCAACTGGGTGTTATCCCTGTTGGTCTGTTCTTTGTGTTGGAGGAATGTTGAGTCTCTAGACCATACATTTCTCCACTGCCCTTTTGCTTGTGCGGCTTGGAGGTGGCTGTTGGGGGAATTTAACATTCATGTTTCTTTTCCTGAGAAGATTGATCATTGGATGGATGAAGTGTTTTCGGGCTGGAATTTTAGAGGTAGAGGGAAGATCTTGTGGAGTATGGCTGCGAGAGCTTTGATGTGGAACCTTTGGCTTGAGAGAAACCGTCGGGTCTTCGAAGATAAGAGTTCTCCGTTTGATTACTTTTGCTCTAATATTAAATATACTGCGTCGTGGTGGTGTACAAAGCACAAGAAATTCTTTTGTAATTACAGCTTGTCCATGATTGTTTCTAACTGGACTGCCTTTGTTTAG

Coding sequence (CDS)

ATGGGGGGGTTTAGGTTGTCGGAGAGAATCGAAAACAAGTCCTTCTCTATTTCCTTCGATTCGGAGAAGAGAGGAAGATATGTCAAGATCGTGGAGCATCATGGACGCGTAACTTTCGAGGTCTCGATAGAAGAAATAGCAACGGTTTGGATTGCGGATAATATTGAAGATCTTCTCCTTTCCCCGAAAACGCAAAAATTCTTTAGGAAAACGGACTGCAACGGAGGCTTCCTGTGGATTCAAAAAACAGCAAACAAAAGAGGTGACTTCTTAGAAGTGATGAAGGTTCAAAGTTCGGGAGGAAAGCGAAATCTGGTCATCCCCGCAGACTTGGAATTCAATGGATGGAAGTCTTTTCGTAGGTTATTAATGAACTTTATGAATGGCCAAGGGGATGAAGAGAAAGAAAAAGAAAAGTTGGTGTTGGATGGCAAAAAGAAGACGAGCAGATCTTTCGCTGAAGCCCTGAGGGGGGAACCCTCGGGGGGAGCCCATAGTAGATGCTTGAAGAGCGTGAAATCATCGAACTTCCAGGACCTTTGGACGCAGGAAGCTGGTGAGACGGATGTTCGTGCCTTGCTTAAATGCCCCACTGGTGATATGGCTCGTCTGCTTACAACAAACAGGGGATGGGTTACCTTCGGTCCTCTGACAGTGAAAGTTGAATATTGGAACCCAATTATTCATGGAAAATCTTCCGTTATTCCCTCTTATGGGGGGTGGATTAGATTTAGGAACATTCTTCTGCATTTATGGAACTTGGCCACATTTAAAGCAATTGGGGATATGTTTGGGGGCTTCATTGATTACGCACAGGCCAACTCGAATCTCATTGAATGTATGGGAGTGGCTATAAAGGTTCGAGGAAATTATTGTGGATTCATTCCCTCGGAAGTTTGTCTGATAGATAGGGATCAAACCTTCGTTGCCCGTGTAGTTTCTTTTGAGAACCACAACCTTCTGATCGGAAAAGAGGTCGGGAAACATGGCGGATTCTCGCCGGAGGCGGCGAGGAGTTTTTTTGGGTCGGAGATGGGCTACGGCCCAAACCTAGTGGACTTTGGCGTGTTCAAGATGGGATCTTTTGTCCAGCAGTTAACATCATGTACCCCTGTCCCACTTTGGAACTCTCCCATGGGACCCACCCAGGCGACTACAGTCCAAAAAGACGCTCTGCCCAAGGAGAACCCCACCCCGAAACCTGGACTCCAATCGAAAAAGAAAAAGAAGAAAGGGAAAGCGGTGGCTTTTGAGAAAGGCTCCAACTCCCAACCTTCCATGAAAAGGGGTGTGGAAGAGTGTCCAAGAAAAGATGCTGAAGAGCCTATTGTTGAAAAGGAAGATCCTCCTTCGGAGTTCTACATGTGTTTTAGAGAAGATGAGTTGCAGGATCTTATGGTGGGTGAAGAGAGAGCCATGATTCCAGTTCAGCCTCAGGTAGAGTTAGGAGATTTTCCCTCTTTAGCTATCAGAGACCAGCTGGAAGAAATCGGGTCAGAAGGGGAGGGGGATTTTCCGTTCTCTAGGCAAATGGTGAAGAATCTAAAGAAATGGAACATGGGGATTGGAGCTCCTCCCAAAAGAGCTCTGATAAAAAATTTCCTTTCTAAGCTTTATCCGGATGTGGTGCTGCTGCAGGAGACTAGATTGAATTCGATGAATAGGCGGCTTGTTAAATCTATTTGGAGTGCCAAGTGCATAGGGTGGGTGGCCTTAGATGCTGTGGGCTCGGCTGGAGGCGTGCTGGTTTTATGGAAAGAAGATGTCATCTCGCTTGAAGATGCTCTTTGGAGGAAAGTCGTGGTGAGTATCTATGGTATAGACCAGAGAGGGTGGAGCTCCCTTCCCCCGAAAGGTAAAGCTAGAGGAAGACCCTGGTTCGATATCATGAAAACGGGCATATGGTTCATTAATTTCATCAGTTTTAAGGTTAATAAGGGTGATAAGGTTCTTTTTTGGAAAGATAGATGGATTGGGAATGATACGCTAGCCTCTTCCTTCCCAGATTTGTTTAACATCTCTATTAAGAAAAATGCCACGGTGGATCAATGTTGGAACTCAGATTCGATGGACTGGGACTTGGGATTCAGAAGAGGCCTCTTTGATTGGGAGATCACCAGTTGGATTGGGCTGATTGAGAGGATTGATGTTGTTCGCCTAGGGGATGGTAGTGATAAATCTCTATGGTGCCTTGAAAAATCCGGAATTTTTTCTTCAAGATCTGCTTTCTTAAAGTTGGCAGAAGTGAGTCCTACCCTCAAAACCCCCTTGATCAAGTACATTTGGAAGAATTGTGCTCCTAGGAAGGTCAAGGTCTTCCTTTGGCCCCTTGCCCACAGAAGCCTCAATACCCTTGACCTTCTTCATAAGAAATGCAGCAACTGGGTGTTATCCCTGTTGGTCTGTTCTTTGTGTTGGAGGAATGTTGAGTCTCTAGACCATACATTTCTCCACTGCCCTTTTGCTTGTGCGGCTTGGAGGTGGCTGTTGGGGGAATTTAACATTCATGTTTCTTTTCCTGAGAAGATTGATCATTGGATGGATGAAGTGTTTTCGGGCTGGAATTTTAGAGGTAGAGGGAAGATCTTGTGGAGTATGGCTGCGAGAGCTTTGATGTGGAACCTTTGGCTTGAGAGAAACCGTCGGGTCTTCGAAGATAAGAGTTCTCCGTTTGATTACTTTTGCTCTAATATTAAATATACTGCGTCGTGGTGGTGTACAAAGCACAAGAAATTCTTTTGTAATTACAGCTTGTCCATGATTGTTTCTAACTGGACTGCCTTTGTTTAG

Protein sequence

MGGFRLSERIENKSFSISFDSEKRGRYVKIVEHHGRVTFEVSIEEIATVWIADNIEDLLLSPKTQKFFRKTDCNGGFLWIQKTANKRGDFLEVMKVQSSGGKRNLVIPADLEFNGWKSFRRLLMNFMNGQGDEEKEKEKLVLDGKKKTSRSFAEALRGEPSGGAHSRCLKSVKSSNFQDLWTQEAGETDVRALLKCPTGDMARLLTTNRGWVTFGPLTVKVEYWNPIIHGKSSVIPSYGGWIRFRNILLHLWNLATFKAIGDMFGGFIDYAQANSNLIECMGVAIKVRGNYCGFIPSEVCLIDRDQTFVARVVSFENHNLLIGKEVGKHGGFSPEAARSFFGSEMGYGPNLVDFGVFKMGSFVQQLTSCTPVPLWNSPMGPTQATTVQKDALPKENPTPKPGLQSKKKKKKGKAVAFEKGSNSQPSMKRGVEECPRKDAEEPIVEKEDPPSEFYMCFREDELQDLMVGEERAMIPVQPQVELGDFPSLAIRDQLEEIGSEGEGDFPFSRQMVKNLKKWNMGIGAPPKRALIKNFLSKLYPDVVLLQETRLNSMNRRLVKSIWSAKCIGWVALDAVGSAGGVLVLWKEDVISLEDALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWKDRWIGNDTLASSFPDLFNISIKKNATVDQCWNSDSMDWDLGFRRGLFDWEITSWIGLIERIDVVRLGDGSDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKVFLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGEFNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFDYFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTAFV

Homology

[Close]

BLAST of Spg019677 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 212.6 bits (540), Expect = 1.4e-50
Identity = 116/335 (34.63%), Postives = 163/335 (48.66%), Query Frame = 0


Query: 595  ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
            ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 1694 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 1753

Query: 655  DRWIGNDTLASSFPDLFNISIKKNATVDQCWNSD-SMDWDLGFRRGLFDWEITSWIGLIE 714
            D W G   L   +P L  +   KNA +     S     W+  FRR L D EI    GL++
Sbjct: 1754 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQ 1813

Query: 715  RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
              D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 1814 SFDRLHISSSVPDKRSWSLSSSGLFTVKSFFLALSQYSVSPPIFPTKFVWNAQVPFKVKS 1873

Query: 775  FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
            F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 1874 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 1933

Query: 835  FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
              +    P  I   +   F+G+ F  RG +LW  A  ALMW +W ERN R+FEDK+   +
Sbjct: 1934 AKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSE 1993

Query: 895  YFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTA 928
            Y   +I +  S+W     K F    L+M+  +W A
Sbjct: 1994 YLWDSICFLTSFWAF-CSKVFKGIPLNMLQLDWLA 2027

[Close]

BLAST of Spg019677 vs. NCBI nr
Match: RVW70235.1 (LINE-1 retrotransposable element ORF2 protein [Vitis vinifera])

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-09
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 518 WN-MGIGAPPKRALIKNFLSKLYPDVVLLQETRLNSMNRRLVKSIWSAKCIGWVALDAVG 577
           WN  G+G+  KR ++K+FL    PDVV+ QET+    +RR V S+W+A+   W AL A G
Sbjct: 817 WNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACG 876

Query: 578 SAGGVLVLWKEDVISLEDALWRKVVVSI 605
           ++GG+L++W    +S E+ +     VSI
Sbjct: 877 ASGGILIIWDTKKLSREEVMLGSFSVSI 904

HSP 2 Score: 211.5 bits (537), Expect = 3.2e-50
Identity = 117/339 (34.51%), Postives = 173/339 (51.03%), Query Frame = 0


Query: 595 ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
           +LW KV+ S YG++  GW++ PP+  +    W DI      F+    F+V  G++V FW+
Sbjct: 58  SLWHKVIRSKYGLEVNGWNARPPRRVSSRSLWKDISSGAHQFLRCCKFEVGNGERVRFWE 117

Query: 655 DRWIGNDTLASSFPDLFNISIKKNATVDQCW--NSDSMDWDLGFRRGLFDWEITSWIGLI 714
           D W+    L   FP LF +S K N  +      +S S+ W+  FRR L + EI     L+
Sbjct: 118 DGWLAGGPLKEQFPRLFLLSRKHNHNISSFVEPSSSSLSWNFDFRRNLNEMEIEEAASLL 177

Query: 715 ERIDVVRLGDGS-DKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVK 774
           ++++V+RL     D   W LE SG+F+ +S    L+        P    IWK+ AP KVK
Sbjct: 178 QKVEVIRLSPSKMDNRRWNLEASGLFTCKSYRSLLSNNGIVHYYPPYSQIWKSKAPPKVK 237

Query: 775 VFLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLG 834
           + +W +A  SLNT D + K+     LS   CSLC    ES++H FLHC ++   W  L  
Sbjct: 238 ILVWFVATGSLNTCDKIQKRNPLMCLSPHWCSLCKAKEESVNHIFLHCSYSIQLWWKLFQ 297

Query: 835 EFNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSS-P 894
           E  +    P+     +   F       + K LW     A+ WN+WLERN+R+FED +   
Sbjct: 298 EVKVSWVIPKGCFELLSTNFKALGKGKKSKALWGCLVSAIFWNIWLERNKRIFEDYTGVG 357

Query: 895 FDYFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTAFV 930
            +     +KY AS+W +  K+ F N SLS I+ +  A V
Sbjct: 358 AEVLWGRVKYWASFWASVTKE-FNNCSLSQILWDLLAAV 395

[Close]

BLAST of Spg019677 vs. NCBI nr
Match: CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 3.2e-50
Identity = 114/335 (34.03%), Postives = 164/335 (48.96%), Query Frame = 0


Query: 595  ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
            ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 1546 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 1605

Query: 655  DRWIGNDTLASSFPDLFNISIKKNATVDQCWN-SDSMDWDLGFRRGLFDWEITSWIGLIE 714
            D W G   L   +P L  +   KNA +      +    W+  FRR L D EI    GL++
Sbjct: 1606 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQ 1665

Query: 715  RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
             +D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 1666 SLDRLHISSSVPDKRSWFLSPSGLFTVKSFFLALSQYSESPTIFPTKFVWNAQVPFKVKS 1725

Query: 775  FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
            F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 1726 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 1785

Query: 835  FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
              +    P  I   +   F+G+ F  RG +LW  A  A+MW +W ERN R+FEDK+   +
Sbjct: 1786 AKMDWVSPRSISDMLSSNFNGFGFSKRGIVLWQNACIAIMWVVWRERNARIFEDKARNSE 1845

Query: 895  YFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTA 928
            Y   +I +  S+W     K F    L+M+  +W A
Sbjct: 1846 YLWDSICFLTSFWAF-CSKVFKGIPLNMLQLDWLA 1879

[Close]

BLAST of Spg019677 vs. NCBI nr
Match: RVX17938.1 (CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera])

HSP 1 Score: 211.1 bits (536), Expect = 4.2e-50
Identity = 112/319 (35.11%), Postives = 156/319 (48.90%), Query Frame = 0


Query: 595 ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
           ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 667 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 726

Query: 655 DRWIGNDTLASSFPDLFNISIKKNATVDQCWNSD-SMDWDLGFRRGLFDWEITSWIGLIE 714
           D W G   L   +P L  +   KNA +     S     W+  FRR L D EI    GL++
Sbjct: 727 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQ 786

Query: 715 RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
             D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 787 SFDRLHISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFKVKS 846

Query: 775 FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
           F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 847 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 906

Query: 835 FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
             +    P  I   +   F+G+ F  RG +LW  A  ALMW +W ERN R+FEDK+   +
Sbjct: 907 AKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSE 966

Query: 895 YFCSNIKYTASWWCTKHKK 912
           Y   +I +  S+W    KK
Sbjct: 967 YLWDSICFLTSFWAFCSKK 985

[Close]

BLAST of Spg019677 vs. NCBI nr
Match: RVW80860.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 211.1 bits (536), Expect = 4.2e-50
Identity = 115/335 (34.33%), Postives = 163/335 (48.66%), Query Frame = 0


Query: 595 ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
           ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 284 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 343

Query: 655 DRWIGNDTLASSFPDLFNISIKKNATVDQCWN-SDSMDWDLGFRRGLFDWEITSWIGLIE 714
           D W G   L   +P L  +   KNA +      +    W+  FRR L D EI    GL++
Sbjct: 344 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQ 403

Query: 715 RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
             D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 404 SFDRLHISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFKVKS 463

Query: 775 FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
           F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 464 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 523

Query: 835 FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
             +    P  I   +   F+G+ F  RG +LW  A  ALMW +W ERN R+FEDK+   +
Sbjct: 524 AKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSE 583

Query: 895 YFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTA 928
           Y   +I +  S+W     K F    L+M+  +W A
Sbjct: 584 YLWDSICFLTSFWAF-CSKVFKGIPLNMLQLDWLA 617

[Close]

BLAST of Spg019677 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.9e-51
Identity = 116/335 (34.63%), Postives = 163/335 (48.66%), Query Frame = 0


Query: 595  ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
            ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 1694 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 1753

Query: 655  DRWIGNDTLASSFPDLFNISIKKNATVDQCWNSD-SMDWDLGFRRGLFDWEITSWIGLIE 714
            D W G   L   +P L  +   KNA +     S     W+  FRR L D EI    GL++
Sbjct: 1754 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQ 1813

Query: 715  RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
              D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 1814 SFDRLHISSSVPDKRSWSLSSSGLFTVKSFFLALSQYSVSPPIFPTKFVWNAQVPFKVKS 1873

Query: 775  FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
            F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 1874 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 1933

Query: 835  FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
              +    P  I   +   F+G+ F  RG +LW  A  ALMW +W ERN R+FEDK+   +
Sbjct: 1934 AKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSE 1993

Query: 895  YFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTA 928
            Y   +I +  S+W     K F    L+M+  +W A
Sbjct: 1994 YLWDSICFLTSFWAF-CSKVFKGIPLNMLQLDWLA 2027

[Close]

BLAST of Spg019677 vs. ExPASy TrEMBL
Match: A0A438GDE7 (LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_4 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.8e-10
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 518 WN-MGIGAPPKRALIKNFLSKLYPDVVLLQETRLNSMNRRLVKSIWSAKCIGWVALDAVG 577
           WN  G+G+  KR ++K+FL    PDVV+ QET+    +RR V S+W+A+   W AL A G
Sbjct: 817 WNTRGLGSKKKRRVVKDFLRSEKPDVVMFQETKKEECDRRFVGSVWTARNKDWAALPACG 876

Query: 578 SAGGVLVLWKEDVISLEDALWRKVVVSI 605
           ++GG+L++W    +S E+ +     VSI
Sbjct: 877 ASGGILIIWDTKKLSREEVMLGSFSVSI 904

HSP 2 Score: 211.5 bits (537), Expect = 1.5e-50
Identity = 114/335 (34.03%), Postives = 164/335 (48.96%), Query Frame = 0


Query: 595  ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
            ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 1546 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 1605

Query: 655  DRWIGNDTLASSFPDLFNISIKKNATVDQCWN-SDSMDWDLGFRRGLFDWEITSWIGLIE 714
            D W G   L   +P L  +   KNA +      +    W+  FRR L D EI    GL++
Sbjct: 1606 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQ 1665

Query: 715  RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
             +D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 1666 SLDRLHISSSVPDKRSWFLSPSGLFTVKSFFLALSQYSESPTIFPTKFVWNAQVPFKVKS 1725

Query: 775  FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
            F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 1726 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 1785

Query: 835  FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
              +    P  I   +   F+G+ F  RG +LW  A  A+MW +W ERN R+FEDK+   +
Sbjct: 1786 AKMDWVSPRSISDMLSSNFNGFGFSKRGIVLWQNACIAIMWVVWRERNARIFEDKARNSE 1845

Query: 895  YFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTA 928
            Y   +I +  S+W     K F    L+M+  +W A
Sbjct: 1846 YLWDSICFLTSFWAF-CSKVFKGIPLNMLQLDWLA 1879

[Close]

BLAST of Spg019677 vs. ExPASy TrEMBL
Match: A0A540LFH9 (zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_029232 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.5e-50
Identity = 117/339 (34.51%), Postives = 173/339 (51.03%), Query Frame = 0


Query: 595 ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
           +LW KV+ S YG++  GW++ PP+  +    W DI      F+    F+V  G++V FW+
Sbjct: 58  SLWHKVIRSKYGLEVNGWNARPPRRVSSRSLWKDISSGAHQFLRCCKFEVGNGERVRFWE 117

Query: 655 DRWIGNDTLASSFPDLFNISIKKNATVDQCW--NSDSMDWDLGFRRGLFDWEITSWIGLI 714
           D W+    L   FP LF +S K N  +      +S S+ W+  FRR L + EI     L+
Sbjct: 118 DGWLAGGPLKEQFPRLFLLSRKHNHNISSFVEPSSSSLSWNFDFRRNLNEMEIEEAASLL 177

Query: 715 ERIDVVRLGDGS-DKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVK 774
           ++++V+RL     D   W LE SG+F+ +S    L+        P    IWK+ AP KVK
Sbjct: 178 QKVEVIRLSPSKMDNRRWNLEASGLFTCKSYRSLLSNNGIVHYYPPYSQIWKSKAPPKVK 237

Query: 775 VFLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLG 834
           + +W +A  SLNT D + K+     LS   CSLC    ES++H FLHC ++   W  L  
Sbjct: 238 ILVWFVATGSLNTCDKIQKRNPLMCLSPHWCSLCKAKEESVNHIFLHCSYSIQLWWKLFQ 297

Query: 835 EFNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSS-P 894
           E  +    P+     +   F       + K LW     A+ WN+WLERN+R+FED +   
Sbjct: 298 EVKVSWVIPKGCFELLSTNFKALGKGKKSKALWGCLVSAIFWNIWLERNKRIFEDYTGVG 357

Query: 895 FDYFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTAFV 930
            +     +KY AS+W +  K+ F N SLS I+ +  A V
Sbjct: 358 AEVLWGRVKYWASFWASVTKE-FNNCSLSQILWDLLAAV 395

[Close]

BLAST of Spg019677 vs. ExPASy TrEMBL
Match: A0A438K9P9 (CDP-diacylglycerol--serine O-phosphatidyltransferase 1 OS=Vitis vinifera OX=29760 GN=PSS1_1 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-50
Identity = 112/319 (35.11%), Postives = 156/319 (48.90%), Query Frame = 0


Query: 595 ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
           ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 667 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 726

Query: 655 DRWIGNDTLASSFPDLFNISIKKNATVDQCWNSD-SMDWDLGFRRGLFDWEITSWIGLIE 714
           D W G   L   +P L  +   KNA +     S     W+  FRR L D EI    GL++
Sbjct: 727 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQ 786

Query: 715 RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
             D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 787 SFDRLHISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFKVKS 846

Query: 775 FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
           F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 847 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 906

Query: 835 FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
             +    P  I   +   F+G+ F  RG +LW  A  ALMW +W ERN R+FEDK+   +
Sbjct: 907 AKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSE 966

Query: 895 YFCSNIKYTASWWCTKHKK 912
           Y   +I +  S+W    KK
Sbjct: 967 YLWDSICFLTSFWAFCSKK 985

[Close]

BLAST of Spg019677 vs. ExPASy TrEMBL
Match: A0A438H8I3 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_629 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-50
Identity = 115/335 (34.33%), Postives = 163/335 (48.66%), Query Frame = 0


Query: 595 ALWRKVVVSIYGIDQRGWSSLPPKGKARGRPWFDIMKTGIWFINFISFKVNKGDKVLFWK 654
           ALW +V++SIYG    GW        +   PW  I      F  F  F V  GD++ FW 
Sbjct: 284 ALWHQVILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWD 343

Query: 655 DRWIGNDTLASSFPDLFNISIKKNATVDQCWN-SDSMDWDLGFRRGLFDWEITSWIGLIE 714
           D W G   L   +P L  +   KNA +      +    W+  FRR L D EI    GL++
Sbjct: 344 DLWWGEQPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQ 403

Query: 715 RIDVVRLGDG-SDKSLWCLEKSGIFSSRSAFLKLAEVSPTLKTPLIKYIWKNCAPRKVKV 774
             D + +     DK  W L  SG+F+ +S FL L++ S +      K++W    P KVK 
Sbjct: 404 SFDRLHISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFKVKS 463

Query: 775 FLWPLAHRSLNTLDLLHKKCSNWVLSLLVCSLCWRNVESLDHTFLHCPFACAAWRWLLGE 834
           F+W +AH+ +NT DLL  +     LS  +C LC ++ E++DH FLHC      W  L   
Sbjct: 464 FVWLVAHKKVNTNDLLQLRRPYKALSPDICKLCMKHGETVDHLFLHCSLTIGLWHRLFQS 523

Query: 835 FNIHVSFPEKIDHWMDEVFSGWNFRGRGKILWSMAARALMWNLWLERNRRVFEDKSSPFD 894
             +    P  I   +   F+G+ F  RG +LW  A  ALMW +W ERN R+FEDK+   +
Sbjct: 524 AKMDWVSPRSISDMLASNFNGFGFSKRGIVLWQNACIALMWVVWRERNARIFEDKARNSE 583

Query: 895 YFCSNIKYTASWWCTKHKKFFCNYSLSMIVSNWTA 928
           Y   +I +  S+W     K F    L+M+  +W A
Sbjct: 584 YLWDSICFLTSFWAF-CSKVFKGIPLNMLQLDWLA 617

The following BLAST results are available for this feature:

BLAST of Spg019677 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW70235.1	1.4e-50	34.63	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
RVW70235.1	1.6e-09	40.91	LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]	[more]
CAN65484.1	3.2e-50	34.03	hypothetical protein VITISV_029474 [Vitis vinifera]	[more]
RVX17938.1	4.2e-50	35.11	CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera]	[more]
RVW80860.1	4.2e-50	34.33	putative ribonuclease H protein [Vitis vinifera]	[more]

BLAST of Spg019677 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg019677 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438GDE7	6.9e-51	34.63	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A0A438GDE7	7.8e-10	40.91	LINE-1 retrotransposable element ORF2 protein OS=Vitis vinifera OX=29760 GN=Pol_...	[more]
A0A540LFH9	1.5e-50	34.51	zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_029232 PE=4...	[more]
A0A438K9P9	2.0e-50	35.11	CDP-diacylglycerol--serine O-phosphatidyltransferase 1 OS=Vitis vinifera OX=2976...	[more]
A0A438H8I3	2.0e-50	34.33	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_629 P...	[more]

BLAST of Spg019677 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 737..826 e-value: 6.7E-14 score: 52.4
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 208..277 e-value: 1.2E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 380..445
None	No IPR available	PANTHER	PTHR36617	PROTEIN, PUTATIVE-RELATED	coord: 624..806
None	No IPR available	PANTHER	PTHR36617:SF4	SUBFAMILY NOT NAMED	coord: 624..806
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 518..598

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg019677.1	Spg019677.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity