Spg019613 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019613
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear transcription factor Y subunit gamma
Locationscaffold5: 34721224 .. 34725960 (-)
RNA-Seq ExpressionSpg019613
SyntenySpg019613
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAATTACCATTGAGCTATGCTTATGCTATTGTAAGTCCTATTGTTCATTTCCATCCAAAGGCTCCACAGGAAAGTTCTGACCATTTGGCATTTGCAACAAGAGGAAATCTTTGTCCGTGTAAGGCTGTGAGTGGGCTTTGTTTCTAGATCCAATGCTTTTACTAGTGCTCGAGAAATTGGCAATTTTGATGCTCCCATTGCCAGTAATTACATTACATATATTGTTGTTGATGGTAATGCTCCTTGTTTTGAACATGGTATGTTGTTGACCTCTGGTGATTTTGATTTTGAGTTCAATCAATGTTTTGAAAAACATACCACCAAAAGGGCTTCTCCTTTAAGATAGATCTTGTGAATAGGTAAAAAAGGATGGGGAAAGTTTTCCTAGCTCTACTGGTAGCGAAAAGATTTATTTGTTTTTTTGAACAAGACACGATCTTTTCATTGATGAAATGAAAAGAGACTAATGCTCAAAGGACACAAACTCCACAAGAGAGTGAAAATGAAAGAGGTTATAAAAAGCATAAAGTCCAAACAAAACAAATTACAAAGGATAAATAAAAGCATTCCAAATCAGAAGAAAGTCCTATGATGAGAAGACAACAAAAAGCTTTGAGAGAGAACATCAAGAAGAGGCCTTTAGATGAGCTGATTCAAATCGGACGAGCGATGAAAAAGACTTGGTTTGGAAGATCCATTGATTACGATCCAACCAAAATTCTGATAATGGAGCTAGAAGTTTCTAATATGAAGTATTGAAAAAGCCAAGAATTTATGCTTCAATTTCACTAAATGAAAGAAGAAAAGATTTATTTGTTCTTAACATAATAAACAACAATCTATTATATATATATGAAAGAACGACCTTCATTGAGAATGAGTGATATAATAACAATGTAATATTCTTAAAATAACTTTGAGGGGAATCTTCCAATGTAATAATCTATCCAGATTGTTCTATTCTGCTGGAATGGGAATACTTATTGTGGCATTGTTGTTAAAGTTTCATTGCTTCCGCCATGGAGTCTCTATTATTCCAACTATTAGTCCAAATCTTCTTCTATTAAATTACATGATTGGAGCTTTTATAACTTCAGGAAGGATATGTAGAATATACAAGAACATGACGAGTTCCATTAAGATAATGCACCAGAAAGAAGAACCAAATTTGAGGGAAAGGCTTAGATATAACCCATTAAAAAATTGTACCACTGTTTAGAGACTTTTGGGAAGATGAATATATCATATATGGATATTAGTAGTCATTTGGCCAATTGGAAGGTTGTATCTCTTCCTTGCTAGAAAACGAAGATTTGGAACTAAATCAAGAGGAGGATTTCCATATGGATACTTCATATTGGTAGTCATTTGGCCATTCTGGAGCTCTTCTTTCTAAGTGGTTATGAAGATTCATAAGTGATTATTTAGATTACCAAATGAAGTTGATAATCTTTTGAATAAAATTATCCTCAGTATCTATGGTATTGAAAATACGAGGATAGTTTACTCATTACTGGACCTGATGGTAGGTAGCTCTAGAAGACTAGAAGTCCTTGGCTTCTATTCTTAAACTTATCTATTTTAGATTGGTGATTAGTACTTCTATTTGGGAGGCCTATTGGGTGGGGAGTCTTCCCTTGGTATGTGGCATGTGCTCATTGTTTTCGAAACTTGAGATGGTGGCCTCTTGATAGATGGACAGCCTTTTTGATGAAATTCTTTTTCAGTAGACTTAGTAGTGGAGAGGGTGTTCTCAATGCTCATGTGTAAGGCAATTTGGGAAGGCTAGTTACTGAAGAATGCACGGTCTACATATGACCATTCTTGTGGACGTGCTAAAATTCAGAGCAATTAATAAGATGATTTTCCCCTTTATGGCTAAGACTGCCATATTGAGTTTCTCTTCTATTTTTTTCTCCTAATAATTTGCGATCTATCAAGGACTTTAAAGAGGGAAAAGTAGGTTGGAATGTGATAGGACTGCCTGATGAATACAAAATTTTAGAAAGTACGTGGGCTATTTACTAGCTTTATATTGCTCTAATGAACTATGTTGATGAATAGATACTTCGTTAACACTTGTAATGATTGTAGCTTTGTAATGCTGTAAACAAGTACGTCCTATTAAAAAAAAGTGTGCTTGTTTTAGCATAGTTATATTGCTTTGATGAACTCTATTAATAAACAGATACTTTGTTAACACTTGCAATGATTGTAGCAATAGCAAGTAGGGACCTTGTAGAGGGAAAAGTAGGTTGGAATGTGATAGGGCTACTGACGAATACAGAATTTTAGAAAGTGCGTTGGCTATTTATTAGCTTTATGTTGCTATAATTTACTCTGTTGATGAACAGATACTTTGTTAACACTGGTAATGATTGTAGCTTTGTAATGCCTTTAAAAAGGTATGTCCTATTAAAAAAAAAGTGTGCTTGTTTTAACGTAGTTGTATTGCTTTGGTGAACTTGGTTAATAGATACTTTGTTAACACTTACAATGATTGTTGCTTTGTAATGCTTTTATAAACTCTGCTGAAACAAGCACACCTCTTTTCAATAGGACATACCTTTCTAACGACATTGTTTATATGATTGGCAATGTCAGGGCATGTATGTTACAATGGTATAATATACTCCTTTTTTCCCCAAGACTTGACATTTCTCCTTGTCACAGTGTATGTGGCCTATTGATCCATTTGGTAACTTCACTTTTAAGTCTTTGTTTGGTTGGTTTCCTTCCCTCTTCCCTCAATTTCTCCTTTCTTCTCTGAACTTTAGAAGTTGAAGTCTCAAAGAAGATTCAGATCTTTTCTTGGCTTGTTGTCCTTGGGAGGATCAATTCTTTAGACTTTGTTGAAAGAGCCTTGCTGACCTGAATTAGTGTATCTAGTGCAAATGTGTTGCCAAAGATTTGCATTGCTTCGTTCTTTAGATTTTGTGGTAGTCAATTTGGAGTCTCTTTGGTTTAGAGAACGAGTCTTTGCAAGAAGGATTAAAGGAAGACGTTTTGGTTTCATTGTTTTGGGATAAAGACTGCTTACTGTAGCAAGCTAAGAAGCATGGACACGTTAGTTTGGCTAGCGTGTCCGTGTCCGACACTTGTTAGACACGTATTGGGCACTTGTTAGTATAATTGATATGTGGCAAACACTCGTACAAAGTCAATATAGGTCCCTATCAAATACTTGTTAAATATGCTAAATAGACACAATACTAAATGACAAAGAATAATAGATTTTAAGAGTGAAAAACAAACTCATTTTTTTAAGCATACAAAAGCATACAAATGAATAAACTTATTGATTTTAAATTTCCTTGTACAAAAATGATATATATTTTAAAAAATGTATATTTTACTAAACGTGTCCATGCCGTGTTCGTGTCCTAGATTTTAAAAAAATGACATGTCACCATGTCCGTGTCGTGTCTGTATCTGTGCTTCTTAAGTAGCAAGTCATCTATTTTGCTGTTTTGTGGTTTCTATAGTTAGAAAGAACATTTCTCGAGTTTATATAGGCCATGGGAGGTGTGGAGTTTTGCACATTTTATCATCTCTTTCACGTCATACTTCAATTCTTTTTTGTATTATCCTCTATATTAATCACTAACAGTTGGGGCTCTTTTCCGAGGGCTTTTTGTTTTTGGTGTGTACGTGTCCCTGTTGTATTCTCTCGGGAGGAAGTGTTATAAGAAGCTCCAAAATTATGATAGATACACACATCATTAGCTAATTACTATGTGTATCCCTGCTAAAATCTAACAAATAAGTGAAATGTTTGGGGGTTGGAAAGTGCATTTATTTGTCTGCTTCATGTGCAGATTGCTGTGTTAGAGGAACAGAAAAACGAAGCTGCAGAAAATGAAGCTGCTGATAAAGTTGAAGATGAGGCTAACAAATCAAATGATGTTGAACCAGGTAGTGCAGTGGCAAGTTCTAAGGGTGAGCTTCAAGACGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAGTCAGGTAATTTATTTTGTGTTCTCGAGAATTTTTTTTTCTTACCCTCTCTGCAATATAAATTGGTGAGCTATAGAACCCTACAATTATTTATCGGCATTAACATTGTAACCTGTAACCTTTGAGATCAAGGTGAATCTCTAACGTTGCATATGTATACTGGTTGGCGTTTTGATTTCATCAGTCTCAGGACAACGATCATGCAGTACGCCAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAGCTGCCTCAAAAGCTGATCATATTAGAGATGGCAAGAGGAAGGGCTAACCTTAGAGTGTGTGGATTGCTTGGACCTGTCTTTCTACATTTTAGAAGCAGCTGCAGTTTCGTCCTTACAAATTCAATTCTCTTGTTGGAACTGAGTTACTTGACATCCCACATCTCTGCTAATCCTGGAAGTATATGGTTCTCTAATATTCGAGAATGATTGCTTATTTGAGCTAATTTTGATTTGTTCACAGAAAAATACAGTACCAATTCTTTTTTCCTTGAAATTCGATATCCATGTTAGAAGCTGTTTAACAAGAGCGGAAGGAATTGTGTACGATTATCCACATGTTGAGGTTGTAGCTTTATTTGATTTCACTGTCATGGTTATCTAATGGACTCAGAAATCCCTGCCATTTCAATCAATACATGACACTTTTTTTCCCTTATCTTCAGAAATTCCTGCTATTTCAATCAATG

mRNA sequence

ATGCAATTACCATTGAGCTATGCTTATGCTATTGTAAGTCCTATTGTTCATTTCCATCCAAAGGCTCCACAGGAAAGTTCTGACCATTTGGCATTTGCAACAAGAGGAAATCTTTGTCCGTGTAAGGCTCTTTGTAATGCTGTAAACAAATACTTTGTTAACACTGGTAATGATTGTAGCTTTGTAATGCCTTTAAAAAGGACATACCTTTCTAACGACATTGTTTATATGATTGGCAATGTCAGGGCATCTAAGAAGCATGGACACATTGCTGTGTTAGAGGAACAGAAAAACGAAGCTGCAGAAAATGAAGCTGCTGATAAAGTTGAAGATGAGGCTAACAAATCAAATGATGTTGAACCAGGTAGTGCAGTGGCAAGTTCTAAGGGTGAGCTTCAAGACGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAGTCAGTCTCAGGACAACGATCATGCAGTACGCCAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAGCTGCCTCAAAAGCTGATCATATTAGAGATGGCAAGAGGAAGGGCTAA

Coding sequence (CDS)

ATGCAATTACCATTGAGCTATGCTTATGCTATTGTAAGTCCTATTGTTCATTTCCATCCAAAGGCTCCACAGGAAAGTTCTGACCATTTGGCATTTGCAACAAGAGGAAATCTTTGTCCGTGTAAGGCTCTTTGTAATGCTGTAAACAAATACTTTGTTAACACTGGTAATGATTGTAGCTTTGTAATGCCTTTAAAAAGGACATACCTTTCTAACGACATTGTTTATATGATTGGCAATGTCAGGGCATCTAAGAAGCATGGACACATTGCTGTGTTAGAGGAACAGAAAAACGAAGCTGCAGAAAATGAAGCTGCTGATAAAGTTGAAGATGAGGCTAACAAATCAAATGATGTTGAACCAGGTAGTGCAGTGGCAAGTTCTAAGGGTGAGCTTCAAGACGAGAAACCAGATATTAATGATGTGCCAATGGAAGAAAGTCAGTCTCAGGACAACGATCATGCAGTACGCCAAGATTTGAACGAAAGTACTTTGGATTTAAGTCTGAACTTGAATGCTCTCAACGATGATGGTGAAGCTGCCTCAAAAGCTGATCATATTAGAGATGGCAAGAGGAAGGGCTAA

Protein sequence

MQLPLSYAYAIVSPIVHFHPKAPQESSDHLAFATRGNLCPCKALCNAVNKYFVNTGNDCSFVMPLKRTYLSNDIVYMIGNVRASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG
Homology
[Close]
BLAST of Spg019613 vs. NCBI nr
Match: XP_023521102.1 (uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.3 bits (443), Expect = 5.3e-40
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENEAADKVE EANKSNDVEPGSAVAS+KGELQDEKPDIND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGELQDEKPDIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA SKADHIRDGKRKG
Sbjct: 168 VPMDE--SQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Spg019613 vs. NCBI nr
Match: KAG6573498.1 (hypothetical protein SDJN03_27385, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-39
Identity = 99/113 (87.61%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENE ADKVE EANKSNDVEPGSAVAS+KGELQDEKPDIND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA SKADHIRDGKRKG
Sbjct: 168 VPMDE--SQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Spg019613 vs. NCBI nr
Match: XP_022925360.1 (uncharacterized protein LOC111432647 [Cucurbita moschata])

HSP 1 Score: 173.7 bits (439), Expect = 1.5e-39
Identity = 99/113 (87.61%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENE ADKVE EANKSNDVEPGSAVAS+KGELQDEKPDIND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA SKADHIRDGKRKG
Sbjct: 168 VPMDE--SQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Spg019613 vs. NCBI nr
Match: XP_022994887.1 (uncharacterized protein LOC111490478 [Cucurbita maxima])

HSP 1 Score: 170.2 bits (430), Expect = 1.7e-38
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENEAADKVE EANKSNDVEPGSAVAS+KG+LQDEKP+IND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGDLQDEKPNIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRK 194
           VPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA SKADHIRDGKRK
Sbjct: 168 VPMDE--SQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK 217

[Close]
BLAST of Spg019613 vs. NCBI nr
Match: XP_004150426.1 (uncharacterized protein LOC101221727 [Cucumis sativus] >KAE8652886.1 hypothetical protein Csa_017664 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.8e-35
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENEA D VEDEA +S+DVEP S VA +KGELQDEKPDIND
Sbjct: 108 RRKFKYMPIAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVA-TKGELQDEKPDIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPMEESQSQDND  VRQDLNESTLDLSLNLNAL+D GEA+SKADHIRDGKRKG
Sbjct: 168 VPMEESQSQDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 219

[Close]
BLAST of Spg019613 vs. ExPASy TrEMBL
Match: A0A6J1EHR2 (uncharacterized protein LOC111432647 OS=Cucurbita moschata OX=3662 GN=LOC111432647 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.5e-40
Identity = 99/113 (87.61%), Postives = 102/113 (90.27%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENE ADKVE EANKSNDVEPGSAVAS+KGELQDEKPDIND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENETADKVEYEANKSNDVEPGSAVASAKGELQDEKPDIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA SKADHIRDGKRKG
Sbjct: 168 VPMDE--SQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRKG 218

[Close]
BLAST of Spg019613 vs. ExPASy TrEMBL
Match: A0A6J1JX59 (uncharacterized protein LOC111490478 OS=Cucurbita maxima OX=3661 GN=LOC111490478 PE=4 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 8.2e-39
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENEAADKVE EANKSNDVEPGSAVAS+KG+LQDEKP+IND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENEAADKVEYEANKSNDVEPGSAVASAKGDLQDEKPNIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRK 194
           VPM+E  SQDNDH VRQDLNESTLDLSLNLNALNDDGEA SKADHIRDGKRK
Sbjct: 168 VPMDE--SQDNDHVVRQDLNESTLDLSLNLNALNDDGEAGSKADHIRDGKRK 217

[Close]
BLAST of Spg019613 vs. ExPASy TrEMBL
Match: A0A0A0LVV2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G195230 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0 

Query: 90  IAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDINDVPMEESQS 149
           IAVLEEQKNEAAENEA D VEDEA +S+DVEP S VA +KGELQDEKPDINDVPMEESQS
Sbjct: 8   IAVLEEQKNEAAENEATDNVEDEALESDDVEPSSTVA-TKGELQDEKPDINDVPMEESQS 67

Query: 150 QDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           QDND  VRQDLNESTLDLSLNLNAL+D GEA+SKADHIRDGKRKG
Sbjct: 68  QDNDRPVRQDLNESTLDLSLNLNALDDGGEASSKADHIRDGKRKG 111

[Close]
BLAST of Spg019613 vs. ExPASy TrEMBL
Match: A0A6J1CLM1 (uncharacterized protein LOC111012736 OS=Momordica charantia OX=3673 GN=LOC111012736 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.5e-35
Identity = 93/113 (82.30%), Postives = 99/113 (87.61%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENEA+DKVEDEANKS DVEP   +A++KGEL DEKPDIND
Sbjct: 103 RRKFKYMPIAVLEEQKNEAAENEASDKVEDEANKSYDVEP---MANAKGELLDEKPDIND 162

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPMEE  SQDNDHAVRQDLNESTLDLSLNLNALNDDGE  SKADHIRDGKR+G
Sbjct: 163 VPMEE--SQDNDHAVRQDLNESTLDLSLNLNALNDDGETGSKADHIRDGKRRG 210

[Close]
BLAST of Spg019613 vs. ExPASy TrEMBL
Match: A0A5D3CMI7 (Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001230 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 4.2e-35
Identity = 94/113 (83.19%), Postives = 98/113 (86.73%), Query Frame = 0 

Query: 82  RASKKHGHIAVLEEQKNEAAENEAADKVEDEANKSNDVEPGSAVASSKGELQDEKPDIND 141
           R   K+  IAVLEEQKNEAAENEAAD VEDEA KSNDVEP S VA +KGELQDEKPDIND
Sbjct: 108 RRKFKYIPIAVLEEQKNEAAENEAADDVEDEAIKSNDVEPSSTVA-TKGELQDEKPDIND 167

Query: 142 VPMEESQSQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKADHIRDGKRKG 195
           VPMEE  SQDNDH VRQDLNESTLDLSLNLNAL+D GE +SKADHIRDGKRKG
Sbjct: 168 VPMEE--SQDNDHPVRQDLNESTLDLSLNLNALDDGGETSSKADHIRDGKRKG 217

[Close]
BLAST of Spg019613 vs. TAIR 10
Match: AT4G22320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1). )

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-12
Identity = 55/118 (46.61%), Postives = 68/118 (57.63%), Query Frame = 0 

Query: 86  KHGHIAVLEEQKNEAAENEAADKVE--DEANKSNDVEPGSAV---------ASSKGELQ- 145
           K+  IAVLEEQK E  E E  DK+E  D+ ++ N VE    V         +  K E++ 
Sbjct: 115 KYVPIAVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEV 174

Query: 146 DEKPDINDVPMEESQ------SQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKAD 186
           +EKPDINDVPME+ Q        D +  VRQDLNEST+DL LNLNA + D E   K D
Sbjct: 175 EEKPDINDVPMEDIQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 232

[Close]
BLAST of Spg019613 vs. TAIR 10
Match: AT4G22320.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11
Identity = 55/119 (46.22%), Postives = 68/119 (57.14%), Query Frame = 0 

Query: 86  KHGHIAVLEEQKNEAAENEAADKVE--DEANKSNDVEPGSAV---------ASSKGELQ- 145
           K+  IAVLEEQK E  E E  DK+E  D+ ++ N VE    V         +  K E++ 
Sbjct: 115 KYVPIAVLEEQKKEITEIEEDDKIEEDDKIDEDNKVEQEDKVDEDKTVEESSEKKAEVEV 174

Query: 146 DEKPDINDVPMEESQ-------SQDNDHAVRQDLNESTLDLSLNLNALNDDGEAASKAD 186
           +EKPDINDVPME+ Q         D +  VRQDLNEST+DL LNLNA + D E   K D
Sbjct: 175 EEKPDINDVPMEDIQQVEEKIVQDDEEKVVRQDLNESTVDLGLNLNANDADAENDPKED 233

The following BLAST results are available for this feature:
BLAST of Spg019613 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023521102.15.3e-4088.50uncharacterized protein LOC111784726 [Cucurbita pepo subsp. pepo][more]
KAG6573498.11.5e-3987.61hypothetical protein SDJN03_27385, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022925360.11.5e-3987.61uncharacterized protein LOC111432647 [Cucurbita moschata][more]
XP_022994887.11.7e-3886.61uncharacterized protein LOC111490478 [Cucurbita maxima][more]
XP_004150426.11.8e-3582.30uncharacterized protein LOC101221727 [Cucumis sativus] >KAE8652886.1 hypothetica... [more]
BLAST of Spg019613 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg019613 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EHR27.5e-4087.61uncharacterized protein LOC111432647 OS=Cucurbita moschata OX=3662 GN=LOC1114326... [more]
A0A6J1JX598.2e-3986.61uncharacterized protein LOC111490478 OS=Cucurbita maxima OX=3661 GN=LOC111490478... [more]
A0A0A0LVV21.5e-3586.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G195230 PE=4 SV=1[more]
A0A6J1CLM11.5e-3582.30uncharacterized protein LOC111012736 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
A0A5D3CMI74.2e-3583.19Putative serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Spg019613 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G22320.28.5e-1246.61unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G22320.11.1e-1146.22unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..194
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..160
NoneNo IPR availablePANTHERPTHR34572:SF1GOLGIN FAMILY A PROTEINcoord: 86..186
NoneNo IPR availablePANTHERPTHR34572GOLGIN FAMILY A PROTEINcoord: 86..186

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019613.1Spg019613.1mRNA