Spg019197 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg019197
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Locationscaffold1: 47535321 .. 47547371 (+)
RNA-Seq ExpressionSpg019197
SyntenySpg019197
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTGGAGGCTGGAAATCGCAGATCTTGCTATACAGAAGTTGCTCGCCTAGGACTTGCGGCGCTAGCTCTTGCAATTAGCGGAGGGAGTCGACACGCAGGATCGAGTAGCAGCGGCGCGAGGTTGCTCAGGCGGCAGGACGATGCGAAGTTTAGAGCGTGGGAAGGAGAAAACATCGAGAGAGAGAGAGAGAGAGCCGGGGAGTTCTCAAGGCTGGCGGTCTGATAGCAAAGACATAACACGAGGAAAGGACCTGTTGGAGGGAGGATTGACGGCTGGGACGAAAAGGGCTGCTAGCGTGACCGAAAATCAGAGGGGGGGGGGCAGCGTGGAGAGGAAGGAGAGAAAAATATGAGGGGTTAGGGTTTGATTGCTTTCCTTTTTTTTTTTAAAAAAATTACTTAGCTCTCATAAATCCAAATAACTACCCACTATGCAGAAAGATGTACACCCACTTTTCCATTAACCACTAACACCCACTTTTCCATTAACCACTTAGCACTAAAGCACGGGAAGAGGGAAAAATAAAATATCACGATTGGCTAGAAATATCAATTAAAAGCCAAACTTAAATTCTAATTTTTGTGAAACTAGAATTTAAACTCGATTAATCCAAAATGGTATAATTTCGAAACGCAGGGCGTTACAGTTACATGTACTATCCACAAGTTTTAGGACATAAACCTCAACAGAAACAAGTGCTGGAAAATATAGTGCATTAGCTAAAACTAGGGTTTTTTTTCACTTTTATCCAATCCTTCTAGAGTTCTCACGACACTCTACTCTCCTTTTACAAGTGGGAATAGGGTGAAATCTCTACAAACACTCGGTTTTGATGTCTAACTAGGGGTTAGAATTTAGTCTTCTAGCAAGGACCTCGGGCATCCCTACTCATGGGCAACTACTAGGGTTTTGTCACCACCATCTTCTTCCCAGTGAGTTATGCTTGAATTTCCCTTTGAATCGAGGCCTTTTATAGCCTGGGGAGTGGTTGAGGAGTCACGAAAATGGTGCTAGCAGGTAGCCCAGACAGTTTCGGAGTCAAAAAAGCCGGTTTGGTGTGCAAAACACTCGTACAAAATGACCCGCGACGGACTCAGAATCTTCATCTGCCAAGAAATGCGGTCGCAATTGATTTTTGCCTTGCCAGAAATGCGGTCGCATTTCTGGGAAATTTCAGATTCCTCTATTTTTCTGCAAAACACCAAAACCAAGTAAAATTTCTACCAAAATGAGTTCTTTTAAGCACAAATATGCATAATAATATACACATGCCTCCCAACTTCCTAATTCATCAACTTTAACACTTTTTGAGCTCGGGAATAGTGTTTTTGATCTAAAACATACAATTTTGACAAGAGAATGAGCTAAATATAAGGGTAAAATAGGTATATTTTCTACCCTTATCATACACCAACATGTAGTCCCTCGTTCTCCGAAGATACTTGATGATGTTTTTAACGACCGTTCGGTGGTCTAGCCCTGGATTAGACTAATACCTGCTGACTATCTCTACTGCATAACAAATGTCAGGCCTAGTGCAGAGCATAACATACAGTAAGCTGCCCACAGTTGAGGCATAGGGAATGTGTCTCATATCCTCAACTTCTTGAGGTGTCTTAAGACATTGTTCCTTAGACAAGTGAACCTCATGCCTGAAAGGAAATAAATCCTTCTTGGGGTTGTGCATCGAATATCGAGACAACATTTTGTCGATATATGTTGCTTGAGACAGCGCTAGCGTTTTGTTCTTACAATCCCTAATGATTTGGATCCCAAGAACATATTGAGCCTCTTCCAAATCTATCATTTGGAATTGGGCCGCTAGCCAGTTCTTTATGTCAGTCAGGTACCCTACATCATTCCCAATGAGTAGGATGTCATCCACATATAGTACAAGAAAAGCTATTTTGTTTATGTTGATTTTCTTGTATACACAAGGCTCATCAACATTTTGGTCAAAACCAAAAGAGTTGATTGCAGTATCAAATCTAATGTTCCAAGATCTGGAAGCTTGTTTCAACCCATAAATGGGTCGATTCAGCTTGCAAACCTTTTGCTCCAGACCTTAGGCTATGAACCCTTCGAGGTGAGACATGAAGATATTCTCTTCAAGATTACCATTGAAAAAGGCAGTCTTGACGTCCATTAGCCATATTTCATAGTCATAATATGTGGCTATGGACAAGAGAATTCGGATAGACTTTAGCATAGCAATAGGAGAAAAAGTTTCCTCATAGTCAACCCCTTCTCTCTGGGTATAACCCTTCGCTACCAATCTAGCTTTAAAAGTCTGTACTTTCCCAGTTGCATCTTTCTTTCTCTTATAGATCCATTTACACCCTATGGGTTTTACCCCTTCCGGTAGATCTACGAGTTCCCATACTGAATTGAAGTACATAGACTCCATTTCAAAGTCCATGGTTTTGACCCATTGGTCCTCATCTACGTCATTCGTTGCCTGACGATAAGACAATGGATCTTCAACACGATCATCAGGTATGACAAACTGAGTTTCAGTTAAACCCAAGTAGCGGTCAGGTTGTAATACAGCCCTCCCACTGCGTCAAGACTCTCTCAACGATTGAGAAGGACGAGATAGACCTGAAGAACTAGCTCCTTCATCAACTCTTGTGGAAGGACCAGCTTCATCAACAAATCTTGTTGACTCTTCAGTAGATTTCCCTAATACTAATTTACTACGTGGTTTACAATCTCTCAAATGGTCTTCCTCCAAGAAAGTGGCGTTTGTTGGCACAAACACCTTGTTTTCTTGTGGGTCGTAGAAAAAACCACCTCTCGTTCCTTAGGGTAACCAACAAATTGGCACAACCTTGAACGAGATTCCAATTTCATAGGATTTGTCACAAGCAAATGTGTTGGACAACCCCAGATACGGAAGTAACGCGAACTAGGTTTACTTCCCCTCCATAGCTCGAAAGATGTTTCAGAAACACTCTTCGAGGGAACATTGTTCAGGATGTGTACTGCAGTCTCTACTACATACCCCCAAAACGAGCTAGACAATTTAGCATAGCTCATTATTGAATGAACCATGTCTAACAAGGTTCTATTTCTCCTTTATGATACATCATTTTGCTGAGGTGTACCAGGGGTTGAGAGTTGGGACTGGATTCCATGTTCTATCATATAGTCCTGGAATCTTTGGTCCATGTCCTCTCCACCTCGATTAGATCGAAGTGTTTTGATAGTTTTACCTAACAGGTTTTCAACTTCAACCTTAAACTCCTTGAACTTTTCAAGGGCTTCAGACTTATGCCCCATTAGATATAAGTAACTATATCTCGAATAATCATCTATAAACAAGATTAAGTATTCGTACCCTCCTCAAGCCTTTATATTCATTCGACCACAGAGATCTGAATGTATTAACTCTAAGGGTTCTTTGGCCCTATAACCTTTTCCAGTAAAAAGTCTTTTGGTATTTTTTCCCTCGAGACAAAATTCACACAGTGGTAGTGAATCATCTTCTAACTCACTTAGAAGTCCATTCTTTACCAGATGACTGATCCTATCGATGTTTAGATGACAAAGTCTTAAATGCCAAAGATAGATATTGTTACTTTTAGGATGAATTCGTTGCCATGAGTTTCAGCAGTTTTAAACATTTCGTGATTTAAAAGTTCTCTTGTATTGCTTGGCCTTAAAACACACAAGTTATTTTCAAATTTAGTAGAACAAATATTTTCAAATTGCTTTCAAAAGAAACAAAATACAATTGTTCCAATAAACAGGAAACATAAATAAGGTTCCTTTTCAATATAGGAACTATGTACAAGTTTTCTAAAAACACAAATCTATTTCCAAAAAATAACTTCGCAGCTCCCACTGCACGAGCTAAAACGACGTCTCCCGTTCTGACCCTAAGCGTCATCTCACCATCCTCCAACTATTGAAAGGAGTTATTTCCCTAAAAAGAAGAGCAAAAAAGATTAGTTGCTCCCGAATCTTGTATCCAGGCAAACTGATCATGCTCAACAAGGCATGTTTCTAAAACAAGTAAATTGAATTTACCTTCCTTTTCCTTCTTCTTCTTGGCGATGTACTTGGTGCAGTTTCTCTTCCAGTGTCCATCCACATTACAGTGGGAGCACTCGTCCTTGTCGACCACAACCTTGGCCTTTCCCTTGCCTTGAACAACAGCGACAAGAGCCTTCCCCTTATCACCCTTTTTCTTCTGAATTTTCTTCGAAGAAGAAGCTTGAGGTACAGATTTAGTTCCAAATGATGAACCCTTCTGGAACTTTTTCTTGGAATGGGCCACGTTGACCTCTCCTTCTGCAATTCCGTTGCCTTTAAGCAAGGACTGATAAATTTGTAGCTCGTTAAGAAGGGTGGTAAGGTTATATTGAATCTTATTCATGAAAGCGTTTTTTATGGAATTGCATGAAACTCTTCGAAAGATATTCCATTATGAACGCTACCTGACTTCTCTTGCAAACGACCCCGCCATTTACCTCAACAATGTTGAATTGGTTCATCATATCGAGAACATGTTCCCGAACTTATTGACCCTCCTTCATGCGAGCATTATAGACGTGTTTGAGAGCCTCATGGTGGCCAAAATCTCCCTCGTAGTTTCCACTGTCTCAAACCTTTTGGCGAAGACTTCAGATAAGCTGGCCAAAATGTAGACGCGGGCCTTTTCACTGGCCTTTTTCCACCGATCGTGAGCATCCCTTGTCACTTGGGATGCATTGCGAGCAGGGGTCGAAGGACATTCCTCCATTAAGACGAACCAAAGATCATCTACAACTTAAATCGTATTTATATTGGATTTCCACGGATAATTTTTTGTTAGTAAGTTTCTCATTTTATAAGAGTGTTATTATTGAGGAAGACATTGCTGAAATAAACAAACAATGATCGTATTAGTTATCTTTGCAAACAATCCAATCAATTTAGAAAAACAAATAATCATAGAGCCCTAGTAAACTATTGATCTAGTCTTGCAACGATGCTTTAGAGGTTTAGAGGAACAGACACCAAAGGGTGATCAGCTACTCCTCCTCTAAATAACTCATATTCCTATAGACGTTAGCCGCCGTTGTTCGGTCAAGGATTTGTTAACACATTTAACTCATCCCTGTAAGTGTAACCCTCCCACTTTCAGATCTCAGAAGTACGCACCAACTGACTACCATTAGGAAAGACAATTGTTGGTAATTAACCTAAGAGACCCTATCCTTTTAAGGAGTTCACGGTGTTCTAAATCCTATGATCAGGTCCTCCGAAGGGGTGGTTGCTCCAGGGCAAAACGCAGGCGAATCATAAGACTCTCACGGTGTGACCTAGGGGTGGATACTGATAAGACCTAAATAGTCATAATTTATCGCCTCTAATCTAAGCTTGTTAGAGTTATTTTATGCTTTACTTGTCCTATTTACAGGTTAATTGAGCTTAGGTCTTGTCGAGAGTCAATCACGCTAATTGGTGTTAATTCGGGCCAATTACGGAGTTTTTGGAGCCATCTCGATGTCTTGGACGGAGAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAATTATGACACCGAAAGCCAAAGATCGAAGCCCCGAACCGAGAAGAAGCGAGACAAGATCGAGAAAAGAATCAGGAAGTCGAGATTAGAGGCTGGCGTCTCGACGTCGACGCGATTTCGGCCGAAGACAAAAGTTCGCAGCGTCGAGACGCTGTGCCCTGGCGTCTCGACGCCGACGTATTTTCTATATATATTAGGTCTCGGTTTAGTCTGCCGTTAGGTTAGATTTTGGGTCCCTTTTACGATTTCTTTGCCTGTTTTACTTTCCAGCACGTTTGTAGACCATTCTTGGTCATTTACTATGGATTCTTTCATGTTATTTATCGCTTTTACTTCATCTATGCGTAGCTAAACTTCCTTAGATCGTTGATTGGATTTATGCTTTTATTTCTAATGATATTGGTTGAGTTTTTTGGTTCATAACTTATGTTCTTGCTGTATTTTCATTGAGTTTTGCATGCAATCCTCTTTAAACCAATACATGACCATTAGTCAATTAGGATTGACGCCTATGTGATTATAGCTTGTGTATTCAATCCGTTATTTGAGATAGCCACTAGGTTTAGGCAAGCTACTCTCTACGTGAGACGAACCTTGATAGGTCTAGGATGCATGTTCAAGGTTGTAGAAATTTGGATTTAAATTGAATTTGAATTTAGTTCCTATAATTTTGGACCCACGATCCCAAAGCAACTAGTTTTAATAGCTTGTTGTAAAATTGCTAGTTAATAATCTAGTTAGATATAAGTAGTAATCGTTGCAGAGGTCTCGGATGGTTACTAACTTATGCATAAGGGGTGGCGAGCGATAAAGTCTATATTAATTAATCTTGTTAATTGCAGAATTCACGATTAGCGAGTTAATTAGCACAGGTTAGTGTAGGGAGGTCTTCCGAGTAACCTAGAAGCCAACCAGACTAATGTAATCAGTTTAGAGCAACCATTAGAGAAAACTAGGAAGTCAATGAATTAGAATCAAGCATAATAAATCCTAATCCAATGATCCTTTTTATGTATTTGATCCCGTCTTATTTCTCCTTCGCATATTTAGTTTTCGTGTCATTTAAAATTCAGCATTGAGTTATTTCGTTTTATTTTCTTGCTTGTCATTCATCACCAAAAATCCCCCAGTTTTTATAAGCATAAAATCCTGCACTTATTAGATCCCCCTTCCCTGTGTTCGACCTCGACCACTATTGCTATAAAATTAGTAGTAGTGTCGTGGATTATAAATTTATTTGACAACTTAGGGAGAATTCAACACCCTCCTGGCGGTCCCATCAGAGACCGAGGGATACGTTGACACGTGTCCCGCTCCCACTTACTTTGGACACTTTCCCCTTTCACCTTGTTATTGATCCATGAAAACACTTTCCGAAGGGAGGCCACACCCAAGGTGACACTAAGCTATGCATGGATCTCACGTTGTGAATATAGGGACGTAGGAGCAAAACTTGATTTATATTTCGTTTTGTAATTTTCCTCCCACTAATATGACATACGGTATTATTTAGGATTGTTTAACTTAGATAAATCCGACTAAGTCAATCTATCTAAGTCTAATCCTATTATAACTATTATAATAAGATCTTTACTCTATCTTCTAGGTGAATTAAACTCATTTAATTAACCCTGTGACATTGCATGCTAACATTAAACTATGATTACTTCAACTCAGGTATTCTTGGTCAGTTTCCAGGTAGGAGGTGTTCCATAAACCGCCAACTTAAACACCCCCAGCCTTAGACAGAACTTAACCGGTAGAGTTCTCTTATAATCATAGTAATGTTTTTCCTACTTAGTTAATTAAAACTATTTTAATACTAAGTAAGATTAATTCTAATCCTATTAGAATATGATTTTAGGTCTAATTAATTTTAACCAACAAAAATTAATTGATTTAAACCTATGATCCTATGTTTACATGCAATTCTTGATTGTAGATTGACGGTTTCTAATCATTAATTTAAAAACTTTTTTTCAAATTTTAATTATTAGCCATATAATCATGCATTCTAAAGTTTAATAATTCAATTAACAATCATATTATAGTTAACTAATTAAACTTTATTAATTGCATTGCGTGAATATAATATAACGATTATATTAAAACTATGGATCTTTCATGCTCAATGCAACTTTGATTTTCTTAATATTAATATAACATCTATATTAAATTATCAATCAAGAAAATCATACAAGCAAGCTGCATACAATACATTAAATATAACACTTATATTTAATCTAAGTAATTACATACATCATGCTTTTTCATTTTCATGTTTTTAATATAACTCACATATATTAAACAACTCATGAAAACATCCATGCATTTCAATCATACATTATAACTAATTATAATATATTAAAAATGCATGGGCATTCTTATAACCTAAGGTGGGATTTTAAAACTATATGACATCCATAAAGCATATAAAATAGCATATAAACCGGTTAATTGGCCCCTAGGATAGAATAAAGCTTAAATTTCATAAATAAAGCAAAAATCTATCCTATTACATCCATCTACAGCTTCAGAATAGGGCCAGACCGCATGAACCGACCCGATCCGCATCGAACCGACCTCCAAAAACCCGAATCAAGCCTAAACCGGGTTGGACTAGGCCAAACCGACCCCAGTCCAAACCAGACTGCCGAACCGGACCACGAAACTGTTGCAAACCACTCATCATGTAGCCTTAATTCACGCTGCATGTAATCGCGTCAGCGTCTCAACGCTGATGCGTCTGGAGACGATTATGGGCAAAAAACAGCAGCGTTCTTCATCATTTGACCTCGGTTTTTGGTCTCGTTTTCGTCGATCTTCATCTCCAAAAACCTAATCTAGACCTGAACTTTCAGAGGACTAAAATTTAGAATTCAATGCCCAAAAACGCAGGGGCCTTTACATTTGATCGGATCAAAACAATCGTAAATCTATGGCCAATAAAACGCAAACATTCCTATGAATACCTCACATTCATAATGCATAATCCCACCTTTCAGACTGACGGGACTTGTCGAAGGTCCGAGCCAAATAAATTTATAACCTAGGGCACTATAACTATATTATAGAAATAGTGGTTGGGGTTGATAAGGGTAAAAAATATACCTATTTTACCCTTATATTTAGCTCATTTCCTTGTCAAAAGTTGCATGTTTTGATCAATTCTACTATTCTCGAGCTCAAAACATGTTAAAGTTGATGAATTAGGGAGTTGAGAGTCACATTTGTCAAATTATGCTTATTTGTGCTTAAAAAGACTCAATTTGATATGAATTTGACCCAATTTGGTGTTGTGCAGGAAAACAGAGGAAAGTTGGAATTTGCCCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGTCGTTCCGAGTCCGTCGCGGGTTGTTTTGAACGAGACTTTTGCACACCTAACCGGCCGTTTTGACCCCGAAAATGACTGGGCTACCTACCAACACCTATTTCGTGGCTTCTCAACCACTTCCAATACTATATAAGCTTGTGATTCGAAGAGAAATTCAAGTAGAACTCACTGGGAAGAAGAGGGTGGTGACAGAACCCTAGTAGACGCCCATGAGTAGGGATGCCCGAGGTCCTTCATAGAAAACTGAATTCTAACCTTAATTAGACATCAAACCTTAGGTTTTGTAGGGATTTCCACCCATTCCCACTTGTAAAAGCGAGAGACTGGAGTGTCGAGCGAACTCTAAAAGGATTGGATAAAAGAGCAAACCCTAGTATTTAGCTACTGCCATTATTTCCAGCACTTGTCACTTTTCATTCTTTTGTATTCTTTACATTTTATTTTGAATTGAAAGTTGTTCATTTGCACTTTATCCCACCATGCTTAGCTAAATTCCGTTGAGGGGTTCAATATGGTGAATTCCCTTATGGTTCAATAGCTTGAAAGTGTTTATTTGCTTTAGTTTCTATTCAATGCATGTCATTCTTTATTGATTATCATTATGATCTTGCTGTGTTTAAATTGATCACTTAGACTTTGCATGCTATGTGAGTTTGATCTCGAAAGGGACAGACGATATTGGTTCTCATAAAGGTGATATAGGTGAAAAAGCTCGAAAGAGATTGTTCGGTGGTATAGGGCAAGCTGCCTAAGACACCCTATATCAACTATAGGGTTATAGATTGCATTCGTGAATTATCTATGTCGGAGTCGACTCACATAAATGTGCATAACGGTACTCGCTTAGCCTTCTATCAGTTCTTGGGTGCAAGGCCAAATAAAAGTTAAATTTGACCCAAGGCATTGATTAGGCTTAAGTTGAATAATATATGATTAAAGTTATTGACCTTTGGGATGAAACTATATTGAATACCTCGTTTTATTTATCATTGTTATTTATTTATTTATTTGTTTTGTTTAATTTCCACAAATCAATTATCAATTATTTCTTTGGTTAGCTATTTTAAGCAATCATTTGAGTAGATTATTCTTCAAATCTTAATTTCCAATTTAGTCCTCGTGGGACCGATACCCTTGGAATACTTCTAAGGTTTTTATTACTACGTGCGACAGTCTATACTTGCACTAAGGTTGGCTGAATTTATCATTATTATTATCTATCATCTTATCTCACATCCATCATTCAGCCTCTATCGCACCAAGTTTTTGGTGCTGTTGCCGGCGACCAAAAGTGAAACCAGTTTTGTTTATTTGAAATTGCGATTGAATTGCGACCGCATTTCTGTCTCAAAGGGAATTTGACTTTGATTTGCATTTTTTCTCCTGCAGGTTGAGGTCAGTGCATGAACAAGGGGTGTCCACTCCTTGATATTGATCCTGAGATAGAAAGAAGCTTTCGTCGTCGTAGAAAAGAGCAAAGGCGAAAGAGAAGGGAACAACAAGAGTTGAGCGCACAGGAACCTCTCGAAGAAGCTTGATACATACAAGAGTTTCTGATGGAACAACCTGGAGTCGATCCTCAAGTTAACCCACATAACTATGGAAGGGAGCAAAATGGTGGGAGAATTCCACCAGTTCCACCGGTGCCACAACAAGAAAATCCAATTTATATTGCTGAAGACCGCAATAGAGCAATAAGAGACTATGCTTTACCTGTTTTTCAAACTTTAAATCCAGGAATTTTGGAGCCACCGATAGATGCTCCACAATTTGAATTAAAACCAGTGATGTTTCAAATGTTGAATACCATGGGCCAATTCTCTAGACTTCCAAATGAAGATCCACATAAACACACTAAGCTATTTTTGAGAGTTTGCAATTCCTTTAATGTTACAAGAGTGCCTGAAGATACTTTGAAGCTAAAGCTTTTTCCATTTTCTTTGCAGGGAGATGCTGAAGCTTGGTTGGACTCATTCCCTCCAAACTCCATCACTTCTTGGAACGATTTGGCTGAGAAATTTTTAGAGAAGTTTTTTCCTTCTAATAAAAATGCCAAATATAGAGCTGAAATTATTGCATTTCGACAATCTTACAATGAACCTCTGGATGCAGCCTGGGAAAGATTTCAAAGGTTGGTTCGAAAGTGTCCACACCACGGATTGCCTGCTTGCATCATCTTAGAACATTTTTATAGCGGATTGGATCAAGCTTCGAACACACTAGTCCATGCATCTGCAAACGGATCTTTTCTAAAGAAGTCTGCAAATGAGGCACATGCTATCTTGGACACCATAGCCGCAAACAATAGACAATGGGGAGAAACTGAGCCAACAACAATTTTGAAGAATCCAGCTAAAGCAGTAGAGACAGAGGATAATTCTACAATGCAAGCTCAAATCAAGGCCATCCACAGCATGATGATGGGCATGACCATGGGCAATCAAAAGAACATAGCCCCTACCATTGTTATTGATTCTCATTGTTGTGAAATTTGTGGTGAGGAACACATTGCTGATAACTGTCCACTAAATCCCGTGTCTGTCTTTTATGTAGGTCAATAAGTGAACCAAAATCAGACCAGATGGAATCCATACTCGGCAACATACAACCCAGGTTGGAGACAACATCCAAACTTCTCATGGGGAGGACAAGCTGGCTCAAGTAATTCCAATATAAATCAGTTCGGTAAACCTCCTGCACAACAGCAGCCGCAAAAGAACTTCCAACCAATCCAAGTGAAGAATCAAGAGTCAAATCTAGAGGCTCTTATGAAAGAGTACATGGCAAGAAACGACGTCGCTGTCAGAAATTTGGAAGTACAAATTGGACAGATTGCTCAAGAAATAAAAAATAGACCACAAGGGACGCTGCCCAACAAAACTGAGATCCCTCACCGAGAAGGAAAAGAGCAGTGCAAGGCAGTCACCTTGAGAAGTGGACTAGAGTATGATGGTCCGAAATACCCCGTGAATCAAGAAGTAAGGAAAATCCCACAAGAAGCTCAAGAAAAGTTTTCAGAAAAGAAGTCAAAAATTACCTCAAAAGTTATACATAATAAAGGCAATGAAGAAAAGACCAAGGAGCATGAAGCCTTGAAAGAAAAAAATGAAAGTTCAAGTTCAGCGAAAAAATAG

mRNA sequence

ATGCCATTGGAGGCTGGAAATCGCAGATCTTGCTATACAGAAGTTGCTCGCCTAGGACTTGCGGCGCTAGCTCTTGCAATTAGCGGAGGGAGTCGACACGCAGGATCGAGTAGCAGCGGCGCGAGGTTGCTCAGGCGGCAGGACGATGCGAAGTTTAGAGCGTGGGAAGGAGAAAACATCGAGAGAGAGAGAGAGAGAGCCGGGGAGTTCTCAAGGCTGGCGGTCCTCCGAAGGGGTGGTTGCTCCAGGGCAAAACGCAGGCGAATCATAAGACTCTCACGGTTAATTGAGCTTAGGTCTTGTCGAGAGTCAATCACGCTAATTGGTGTTAATTCGGGCCAATTACGGAGTTTTTGGAGCCATCTCGATGTCTTGGACGGAGAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAATTATGACACCGAAAGCCAAAGATCGAAGCCCCGAACCGAGAAGAAGCGAGACAAGATCGAGAAAAGAATCAGGAAGTCGAGATTAGAGGCTGGCGTCTCGACGTCGACGCGATTTCGGCCGAAGACAAAAGTTCGCAGCGTCGAGACGCTGTGCCCTGGCGTCTCGACGCCGACGTATTTTCTATATATATTAGGTCTCGGTTTAGTCTGCCAATTCACGATTAGCGAGTTAATTAGCACAGGTATTCTTGGTCAGTTTCCAGGGCCAGACCGCATGAACCGACCCGATCCGCATCGAACCGACCTCCAAAAACCCGAATCAAGCCTAAACCGGGTTGGACTAGGCCAAACCGACCCCAGTCCAAACCAGACTGCCGAACCGGACCACGAAACTGTTGCAAACCACTCATCATGTAGCCTTAATTCACGCTGCATGAAAACAGAGGAAAGTTGGAATTTGCCCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGGTTATAGATTGCATTCGTGAATTATCTATGTCGGAGTCGACTCACATAAATGTGCATAACGTCTATACTTGCACTAAGGTTGAGCAGCCGCAAAAGAACTTCCAACCAATCCAAGTGAAGAATCAAGAGTCAAATCTAGAGGCTCTTATGAAAGAGTACATGGCAAGAAACGACGTCGCTGTCAGAAATTTGGAAGTACAAATTGGACAGATTGCTCAAGAAATAAAAAATAGACCACAAGGGACGCTGCCCAACAAAACTGAGATCCCTCACCGAGAAGGAAAAGAGCAGTGCAAGGCAGTCACCTTGAGAAGTGGACTAGAGTATGATGGTCCGAAATACCCCGTGAATCAAGAAGTAAGGAAAATCCCACAAGAAGCTCAAGAAAAGTTTTCAGAAAAGAAGTCAAAAATTACCTCAAAAGTTATACATAATAAAGGCAATGAAGAAAAGACCAAGGAGCATGAAGCCTTGAAAGAAAAAAATGAAAGTTCAAGTTCAGCGAAAAAATAG

Coding sequence (CDS)

ATGCCATTGGAGGCTGGAAATCGCAGATCTTGCTATACAGAAGTTGCTCGCCTAGGACTTGCGGCGCTAGCTCTTGCAATTAGCGGAGGGAGTCGACACGCAGGATCGAGTAGCAGCGGCGCGAGGTTGCTCAGGCGGCAGGACGATGCGAAGTTTAGAGCGTGGGAAGGAGAAAACATCGAGAGAGAGAGAGAGAGAGCCGGGGAGTTCTCAAGGCTGGCGGTCCTCCGAAGGGGTGGTTGCTCCAGGGCAAAACGCAGGCGAATCATAAGACTCTCACGGTTAATTGAGCTTAGGTCTTGTCGAGAGTCAATCACGCTAATTGGTGTTAATTCGGGCCAATTACGGAGTTTTTGGAGCCATCTCGATGTCTTGGACGGAGAGGAGGTGAAGAGACCCAATTGTGCTGAAGCGGGCCTGAATTATGACACCGAAAGCCAAAGATCGAAGCCCCGAACCGAGAAGAAGCGAGACAAGATCGAGAAAAGAATCAGGAAGTCGAGATTAGAGGCTGGCGTCTCGACGTCGACGCGATTTCGGCCGAAGACAAAAGTTCGCAGCGTCGAGACGCTGTGCCCTGGCGTCTCGACGCCGACGTATTTTCTATATATATTAGGTCTCGGTTTAGTCTGCCAATTCACGATTAGCGAGTTAATTAGCACAGGTATTCTTGGTCAGTTTCCAGGGCCAGACCGCATGAACCGACCCGATCCGCATCGAACCGACCTCCAAAAACCCGAATCAAGCCTAAACCGGGTTGGACTAGGCCAAACCGACCCCAGTCCAAACCAGACTGCCGAACCGGACCACGAAACTGTTGCAAACCACTCATCATGTAGCCTTAATTCACGCTGCATGAAAACAGAGGAAAGTTGGAATTTGCCCAGAAATGCGACCGCATTTCTGGAAAAACAGAGGGTTATAGATTGCATTCGTGAATTATCTATGTCGGAGTCGACTCACATAAATGTGCATAACGTCTATACTTGCACTAAGGTTGAGCAGCCGCAAAAGAACTTCCAACCAATCCAAGTGAAGAATCAAGAGTCAAATCTAGAGGCTCTTATGAAAGAGTACATGGCAAGAAACGACGTCGCTGTCAGAAATTTGGAAGTACAAATTGGACAGATTGCTCAAGAAATAAAAAATAGACCACAAGGGACGCTGCCCAACAAAACTGAGATCCCTCACCGAGAAGGAAAAGAGCAGTGCAAGGCAGTCACCTTGAGAAGTGGACTAGAGTATGATGGTCCGAAATACCCCGTGAATCAAGAAGTAAGGAAAATCCCACAAGAAGCTCAAGAAAAGTTTTCAGAAAAGAAGTCAAAAATTACCTCAAAAGTTATACATAATAAAGGCAATGAAGAAAAGACCAAGGAGCATGAAGCCTTGAAAGAAAAAAATGAAAGTTCAAGTTCAGCGAAAAAATAG

Protein sequence

MPLEAGNRRSCYTEVARLGLAALALAISGGSRHAGSSSSGARLLRRQDDAKFRAWEGENIERERERAGEFSRLAVLRRGGCSRAKRRRIIRLSRLIELRSCRESITLIGVNSGQLRSFWSHLDVLDGEEVKRPNCAEAGLNYDTESQRSKPRTEKKRDKIEKRIRKSRLEAGVSTSTRFRPKTKVRSVETLCPGVSTPTYFLYILGLGLVCQFTISELISTGILGQFPGPDRMNRPDPHRTDLQKPESSLNRVGLGQTDPSPNQTAEPDHETVANHSSCSLNSRCMKTEESWNLPRNATAFLEKQRVIDCIRELSMSESTHINVHNVYTCTKVEQPQKNFQPIQVKNQESNLEALMKEYMARNDVAVRNLEVQIGQIAQEIKNRPQGTLPNKTEIPHREGKEQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKKSKITSKVIHNKGNEEKTKEHEALKEKNESSSSAKK
Homology
[Close]
BLAST of Spg019197 vs. NCBI nr
Match: XP_022158408.1 (uncharacterized protein LOC111024897, partial [Momordica charantia])

HSP 1 Score: 97.4 bits (241), Expect = 3.4e-16
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 0 

Query: 334 EQPQKNFQPIQVKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEIKNRPQ 393
           +Q  +  Q   ++N  SNLE +MKEYMAR D  +       RN   Q+G +A E+KNRPQ
Sbjct: 416 QQYNQRTQTPPIQNNNSNLENMMKEYMARTDAVIQSQAASMRNFGTQLGHLANELKNRPQ 475

Query: 394 GTLPNKTEIPHREGKEQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKKSKITS 453
           G+ P  TE+P REGKEQCKAVTLRSGL YDGP  P      +IP           +K T 
Sbjct: 476 GSFPGHTELPRREGKEQCKAVTLRSGLTYDGPTMPTTDV--QIP----------STKPTV 535

Query: 454 KVIHNKGNEEKTKEHEALKEKNESSSS 474
           K+  N      T E E +++ N+ +SS
Sbjct: 536 KIPEN----PTTPEKENIRKGNKDTSS 546

[Close]
BLAST of Spg019197 vs. NCBI nr
Match: XP_022159345.1 (uncharacterized protein LOC111025764 [Momordica charantia])

HSP 1 Score: 96.7 bits (239), Expect = 5.9e-16
Identity = 64/150 (42.67%), Postives = 82/150 (54.67%), Query Frame = 0 

Query: 333 VEQPQKNF----QPIQVKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEI 392
           +  PQ+ +    Q   V+N  SNLE +MKEYMAR D  +       RN E Q+GQ+A E+
Sbjct: 184 IPPPQQRYNQRTQTPPVQNNNSNLENMMKEYMARTDAVIQSQAASMRNFETQLGQLANEL 243

Query: 393 KNRPQGTLPNKTEIPHREGKEQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKK 452
           KNRPQG+ P  TE+P REGKEQCKAVTLRSGL YD P  P      +IP         + 
Sbjct: 244 KNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYDEPTMPTADV--QIPSTGPTVKIPEN 303

Query: 453 SKITSKVIHNKGNEEKTKEHEALKEKNESS 472
                K    KGNE+       + EK++ +
Sbjct: 304 PTTPEKXNIRKGNEDTPSVPPQILEKHKKA 331

[Close]
BLAST of Spg019197 vs. NCBI nr
Match: XP_022150317.1 (uncharacterized protein LOC111018514 [Momordica charantia])

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-15
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 0 

Query: 347 NQESNLEALMKEYMARND--------------VAVRNLEVQIGQIAQEIKNRPQGTLPNK 406
           N  ++LE + KEYMARND                +RNLEVQ+GQ A ++K RPQG+ P  
Sbjct: 236 NNNTSLENMFKEYMARNDALMQSQNATIQTQAAXMRNLEVQMGQXANDLKARPQGSFPGH 295

Query: 407 TEIPHREGKEQCKAVTLRSGLEYDGPKYPV 423
           TE+  R+G EQCKAVTLRSGL Y+GPK PV
Sbjct: 296 TEVXKRDGXEQCKAVTLRSGLSYEGPKMPV 325

[Close]
BLAST of Spg019197 vs. NCBI nr
Match: XP_030502440.1 (uncharacterized protein LOC115717596 [Cannabis sativa])

HSP 1 Score: 93.6 bits (231), Expect = 5.0e-15
Identity = 48/85 (56.47%), Postives = 65/85 (76.47%), Query Frame = 0 

Query: 335 QPQKNFQPIQVKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEIKNRPQG 394
           +PQ+  QP    +Q S+LE+LM++YMA+NDV +       RNLE+Q+GQ+A ++KNRPQG
Sbjct: 299 RPQQPHQP--QGSQTSSLESLMRDYMAKNDVVIQSQAASLRNLEIQLGQLANDLKNRPQG 358

Query: 395 TLPNKTEIPHREGKEQCKAVTLRSG 413
           TLP+ TE P R+G+E CKAVTLRSG
Sbjct: 359 TLPSDTENPRRDGEEHCKAVTLRSG 381

[Close]
BLAST of Spg019197 vs. NCBI nr
Match: XP_030503898.1 (uncharacterized protein LOC115719117 [Cannabis sativa])

HSP 1 Score: 92.8 bits (229), Expect = 8.5e-15
Identity = 57/119 (47.90%), Postives = 76/119 (63.87%), Query Frame = 0 

Query: 335 QPQKNFQPIQVKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEIKNRPQG 394
           +PQ+  QP    +Q S+LE+LM++YMA+ND  +       RNLEVQ+GQ+A ++KNRPQG
Sbjct: 329 RPQQPHQP--QGSQTSSLESLMRDYMAKNDAVIQSQAASLRNLEVQLGQLANDLKNRPQG 388

Query: 395 TLPNKTEIPHREGKEQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKKSKITS 447
           TLP+ TE P R+GKE CKAVTLRSG   +     V  +  K P   Q++   KK   TS
Sbjct: 389 TLPSDTENPRRDGKEHCKAVTLRSGKIIES---NVAAKGSKEPSSIQKEGEMKKKPATS 442

[Close]
BLAST of Spg019197 vs. ExPASy TrEMBL
Match: A0A6J1DW02 (uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024897 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-16
Identity = 64/147 (43.54%), Postives = 83/147 (56.46%), Query Frame = 0 

Query: 334 EQPQKNFQPIQVKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEIKNRPQ 393
           +Q  +  Q   ++N  SNLE +MKEYMAR D  +       RN   Q+G +A E+KNRPQ
Sbjct: 416 QQYNQRTQTPPIQNNNSNLENMMKEYMARTDAVIQSQAASMRNFGTQLGHLANELKNRPQ 475

Query: 394 GTLPNKTEIPHREGKEQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKKSKITS 453
           G+ P  TE+P REGKEQCKAVTLRSGL YDGP  P      +IP           +K T 
Sbjct: 476 GSFPGHTELPRREGKEQCKAVTLRSGLTYDGPTMPTTDV--QIP----------STKPTV 535

Query: 454 KVIHNKGNEEKTKEHEALKEKNESSSS 474
           K+  N      T E E +++ N+ +SS
Sbjct: 536 KIPEN----PTTPEKENIRKGNKDTSS 546

[Close]
BLAST of Spg019197 vs. ExPASy TrEMBL
Match: A0A6J1DYG0 (uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025764 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.8e-16
Identity = 64/150 (42.67%), Postives = 82/150 (54.67%), Query Frame = 0 

Query: 333 VEQPQKNF----QPIQVKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEI 392
           +  PQ+ +    Q   V+N  SNLE +MKEYMAR D  +       RN E Q+GQ+A E+
Sbjct: 184 IPPPQQRYNQRTQTPPVQNNNSNLENMMKEYMARTDAVIQSQAASMRNFETQLGQLANEL 243

Query: 393 KNRPQGTLPNKTEIPHREGKEQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKK 452
           KNRPQG+ P  TE+P REGKEQCKAVTLRSGL YD P  P      +IP         + 
Sbjct: 244 KNRPQGSFPXHTELPKREGKEQCKAVTLRSGLAYDEPTMPTADV--QIPSTGPTVKIPEN 303

Query: 453 SKITSKVIHNKGNEEKTKEHEALKEKNESS 472
                K    KGNE+       + EK++ +
Sbjct: 304 PTTPEKXNIRKGNEDTPSVPPQILEKHKKA 331

[Close]
BLAST of Spg019197 vs. ExPASy TrEMBL
Match: A0A6J1DAE9 (uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018514 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-15
Identity = 48/90 (53.33%), Postives = 59/90 (65.56%), Query Frame = 0 

Query: 347 NQESNLEALMKEYMARND--------------VAVRNLEVQIGQIAQEIKNRPQGTLPNK 406
           N  ++LE + KEYMARND                +RNLEVQ+GQ A ++K RPQG+ P  
Sbjct: 236 NNNTSLENMFKEYMARNDALMQSQNATIQTQAAXMRNLEVQMGQXANDLKARPQGSFPGH 295

Query: 407 TEIPHREGKEQCKAVTLRSGLEYDGPKYPV 423
           TE+  R+G EQCKAVTLRSGL Y+GPK PV
Sbjct: 296 TEVXKRDGXEQCKAVTLRSGLSYEGPKMPV 325

[Close]
BLAST of Spg019197 vs. ExPASy TrEMBL
Match: A0A6J1E110 (uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025424 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.0e-15
Identity = 47/84 (55.95%), Postives = 54/84 (64.29%), Query Frame = 0 

Query: 345 VKNQESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEIKNRPQGTLPNKTEIPH 404
           V+N  SNLE  MKEYMAR D  +       RN E Q+G +A  +KNRPQG+    TE+P 
Sbjct: 110 VQNNNSNLENXMKEYMARTDAVIQSQAASMRNFETQLGXLANXLKNRPQGSFXGHTELPK 169

Query: 405 REGKEQCKAVTLRSGLEYDGPKYP 422
            EGKE CKAVTLRSGL YD P  P
Sbjct: 170 XEGKEXCKAVTLRSGLXYDXPTMP 193

[Close]
BLAST of Spg019197 vs. ExPASy TrEMBL
Match: A0A6J1H7K8 (uncharacterized protein LOC111461167 OS=Cucurbita moschata OX=3662 GN=LOC111461167 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.7e-14
Identity = 53/122 (43.44%), Postives = 75/122 (61.48%), Query Frame = 0 

Query: 349 ESNLEALMKEYMARNDVAV-------RNLEVQIGQIAQEIKNRPQGTLPNKTEIPHREGK 408
           E++LE+L+KEYMA+NDV +       RNLEVQ+GQ+A E++NRP G LP+ TE+P REG 
Sbjct: 39  ETSLESLIKEYMAKNDVVIQSQQASLRNLEVQVGQLANELRNRPLGKLPSDTEMPKREGM 98

Query: 409 EQCKAVTLRSGLEYDGPKYPVNQEVRKIPQEAQEKFSEKKSKITSKVIHNKGNEEK--TK 462
           EQC+A+ LRSG E    +  + +      QE  +    K+  +  +  HNK + E    K
Sbjct: 99  EQCQAIELRSGKEISSREEKIKEHSDSRSQETADTQQRKEEAVVQEE-HNKNDAEALVQK 158

The following BLAST results are available for this feature:
BLAST of Spg019197 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022158408.13.4e-1643.54uncharacterized protein LOC111024897, partial [Momordica charantia][more]
XP_022159345.15.9e-1642.67uncharacterized protein LOC111025764 [Momordica charantia][more]
XP_022150317.13.8e-1553.33uncharacterized protein LOC111018514 [Momordica charantia][more]
XP_030502440.15.0e-1556.47uncharacterized protein LOC115717596 [Cannabis sativa][more]
XP_030503898.18.5e-1547.90uncharacterized protein LOC115719117 [Cannabis sativa][more]
BLAST of Spg019197 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg019197 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1DW021.7e-1643.54uncharacterized protein LOC111024897 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A6J1DYG02.8e-1642.67uncharacterized protein LOC111025764 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DAE91.8e-1553.33uncharacterized protein LOC111018514 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1E1107.0e-1555.95uncharacterized protein LOC111025424 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1H7K87.7e-1443.44uncharacterized protein LOC111461167 OS=Cucurbita moschata OX=3662 GN=LOC1114611... [more]
BLAST of Spg019197 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 454..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 415..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 384..403
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..275

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg019197.1Spg019197.1mRNA