Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TACAACGTCTTTCAACACGAGTACAAGGACATGTTCCTTAGACTTGTGTCACCGCCCCGCCTTTCAGCACGAGTGCAGGGACATGTTCCTTGGACCTGTGCTGCCGCCACGTCATTCAGCATGAGTACAGGGACAATTGACGTCTTTGAACTCATGTTGTTATGATGTTGCACAACATCAGTCTTAGGAAATTTTCCTTGATGCATTATGATTATCATTTTTAACTTATCTTCGTGAATATCTTTATTCTTTTGACTTGTTTTAACTTTCATTTCTTTAAATTTTGCAGAATCATGGTGTGCTTTGCAGAGCATATTGTCTCTGAAAAGACGTACCTTGTTCTCTTGAAACACAACAATCAAGCCCTAAGAAGCAGACTCAGCTTCTTAGTAGAAGAGCCTAAGACTGGACGGCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTGATTGGTCCGTAGAAAGGCCTCTAGACCAAGATTCTAAGGCTTGGTTTCTAGAATCTTCAATCCATACAAAATATCCTAATCGACATCCAGAGGTGACGTTAGGGCGCCGAATAATTGACGGATCAGTTCGTTGGGAATCCGCCTTGAAAATTTCAAGCGAATTTCTTTTCATTCCTCGCTATTGGGAGTGGTTAGAGTTTGTCGTTGGTCGGAGTGAAGAGGTGCTTCAAACTGCTCACTTATTGGATGCAGTGGTGGCTTCCCTTTACACCTACGATCGAAACAATGACATAGTTCGGGCTTTTTGTGAAGCTTGGTGCCCTGCAACCAATACACTTCACACTCGTGCGGGAGAACTTTCTATTTCCTTATGGGACCTTTGGAACTTTGGGGGTTTGTCCATCAGAGGTAGATTTTACGAGGAAGTTATCCCTAGCTTTAAAGAGTTAGCTGGTTCCAACAACCAGGCAAAACACCTTCCAAAAAGTTGCGAACATCTATTTCATGCATTCTACTTGCTTAGCGCTTCAAGAGCTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAGGGTGAACAAAGGTACGCAAAGCCTCCTCAACGGAGACCCAGGAAGCATTCTCGCTCTAGCACGACTCATAACCCAGACAACACAAATATCAAGCGTCGCGAGTGGTCAGATGAGGAGAACAACTTGTTTCACGAGCTAAAGATTGACATGAAACACAGAGACCAGACATACTTGGCGGCGTTTTTATCTTGTTTGCTTTGCACCTTTGTGTTTCCTCAAGGGAATGCTAACCACAATCGTCCTAGTGTTTTTAAGGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCGGTCCCTGTTCTTGCCAACATCTACCACTAGTTAAGCAAAGTTTCCAATGCTTCCGTTTCAGTTGGACGCATAGATGCTTCTCTCCCTGTGCACTACATTTTTGGTTGGCTCGCCCATTATTTTGGTACCAATTATAAGACTCCAACGAAGGTTCGAGGTCCTAGCATGGTAGAATTTTCCGGCGAAGGTGGGGCTATATATTTTGATGAGCTCGAGGCTCGCTAATTGATCCATGGGGGTGCATCCATATCATGGCACACGAACCTTAGTAGGAACAAAAACGAGACCATAAAGTATGAAAAAACTTTGGGATTCATACCTTCTTCCTATTTCTCGAGCCTTCGCTCATGCTACCTGTCAGCACGATGTAAAGATTCATTAGTTATCGAACCCTACAACCCCCACCGATTCGGCCGCCAGTTGGCTTCTATCAAGACATACCTAACGACTTAGGAGAAGTTTTGCCCCTAGTCACCCTAGAAAACATTTTATACCATTGGCGGGTTTGTCTGCGAACCACTGTGGAGTTTCAAATATTTCTTCCAGCTCGTACACTGAATCCTCAGGACCATGTCACCTCACGTTATCGAAGTTGGTGGTCTGAAAAGTATGACAATTACCTAGGGGACGGCATAAGTAAGTTGGTTGACAATATCACTCCCTCTCGAACCCAACCTAAGATACCTAAAAAAAACGATTCTAAATTTTGGGGCAAAGAACTCCGTCTGCTCAAGGTCGCCAAGCCTCTAGATGATTCAACCGAAGAAGAGAGTCAAAACAGCACTGTAGATCGACATTGGAAAAGAGCCAAAAGACCCAAGAAGGGTTCTGATCTCGATGACAAGTCCATCAAGAGTGCCTCTACTGCTTCACAGACTCCTGACGACATTGGGACTTTGGTTGAAAAACTCTTTTTTTTTTTCTTTTTTTTTGTCCCTTTTTTTGTTTTTTTTTTGCTTAAATCCTGTTTTATTTCTCTTTTGCAGCCTCCTTCAAATGACCGTGTACAAGAAGAGGAAGAATGTTCGAGCGATCAATCTCTGACAAGTCCTGATGCTTTTGCTTCTTCTGTGAAGAACTTCGGAAGCTCTCATGCATCCTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAAAGCCCCTCAACACACTCATGAGAAAGTGGTTGCCCCAGTCTTTGAAGTTTCTCAGTTCTATGCTGATGATGTAATTTCCACCTTTCGAAAGCAAGCTGCTTTCTCCATATGGACAAGCATACAACAGAAGATCGTACGCACATCTTTTGAAGATGTTGCTAGCCTCGAGCACCTTGAGCAAGAATCTCAAAAGGTCTTCGATGTAATGGCAGAGGCTACTACGAACAACTTGAAACCTCTGCAATAATTTGTAGGCAACTACTTCAAGAAAGCGCGAGAATTTAATGGATTACAATCTTCGCTCTCCACTCATCTAACCCCCTCGAGTAGGGATAGTCAGTTGGAGGCGAAGAAACTCCACTTAGAGGAGGCTTTGTCTACCAAAGATCGTGTTGTTGAGGAGAAAGATGCGCTTCAGAAACAACTTGCTCGCTCTATCGCAGAGGTTGCAGACCTAAAGACCAAGGTTGCAGAACTAGAGGCCAAGATTGAAAGCCTTTCCAATTCGGTTTCCGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGCAGTTTCAAGAATACGTGAGGAAATTAGTGACATTGAGTGTGCCCCCACCATCAGCGCTTCAGATGTTCGCACCCTAGCGATAATTCGCGAACTTTTGGAGAGTACTCGTGACGAGCTTAAAGCACTTCAATGGAATCCTTAA
mRNA sequence
TACAACGTCTTTCAACACGAGTACAAGGACATGTTCCTTAGACTTGTGTCACCGCCCCGCCTTTCAGCACGAGTGCAGGGACATGTTCCTTGGACCTGTGCTGCCGCCACGTCATTCAGCATGAGTACAGGGACAATTGACGTCTTTGAACTCATAATCATGGTGTGCTTTGCAGAGCATATTGTCTCTGAAAAGACGTACCTTGTTCTCTTGAAACACAACAATCAAGCCCTAAGAAGCAGACTCAGCTTCTTAGTAGAAGAGCCTAAGACTGGACGGCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTGATTGGTCCGTAGAAAGGCCTCTAGACCAAGATTCTAAGGCTTGGTTTCTAGAATCTTCAATCCATACAAAATATCCTAATCGACATCCAGAGGTGACGTTAGGGCGCCGAATAATTGACGGATCAGTTCGTTGGGAATCCGCCTTGAAAATTTCAAGCGAATTTCTTTTCATTCCTCGCTATTGGGAGTGCGCTTCAAGAGCTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAGGGTGAACAAAGGTACGCAAAGCCTCCTCAACGGAGACCCAGGAAGCATTCTCGCTCTAGCACGACTCATAACCCAGACAACACAAATATCAAGCGTCGCGAGTGGTCAGATGAGGAGAACAACTTGTTTCACGAGCTAAAGATTGACATGAAACACAGAGACCAGACATACTTGGCGGCGTTTTTATCTTGTTTGCTTTGCACCTTTGTGTTTCCTCAAGGGAATGCTAACCACAATCGTCCTAGTGTTTTTAAGGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCGGTCGCCAAGCCTCTAGATGATTCAACCGAAGAAGAGAGTCAAAACAGCACTGTAGATCGACATTGGAAAAGAGCCAAAAGACCCAAGAAGGGTTCTGATCTCGATGACAAGTCCATCAAGAGTGCCTCTACTGCTTCACAGACTCCTGACGACATTGGGACTTTGCCTCCTTCAAATGACCGTGTACAAGAAGAGGAAGAATGTTCGAGCGATCAATCTCTGACAAGTCCTGATGCTTTTGCTTCTTCTGTGAAGAACTTCGGAAGCTCTCATGCATCCTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAAAGCCCCTCAACACACTCATGAGAAAGTGGTTGCCCCAGTCTTTGAAGTTTCTCAGTTCTATGCTGATGATGTAATTTCCACCTTTCGAAAGCAAGCTGCTTTCTCCATATGGACAAGCATACAACAGAAGATCGTACGCACATCTTTTGAAGATGTTGCTAGCCTCGAGCACCTTGAGCAAGAATCTCAAAAGTTGGAGGCGAAGAAACTCCACTTAGAGGAGGCTTTGTCTACCAAAGATCGTGTTGTTGAGGAGAAAGATGCGCTTCAGAAACAACTTGCTCGCTCTATCGCAGAGGTTGCAGACCTAAAGACCAAGGTTGCAGAACTAGAGGCCAAGATTGAAAGCCTTTCCAATTCGGTTTCCGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGCAGTTTCAAGAATACGTGAGGAAATTAGTGACATTGAGTGTGCCCCCACCATCAGCGCTTCAGATGTTCGCACCCTAGCGATAATTCGCGAACTTTTGGAGAGTACTCGTGACGAGCTTAAAGCACTTCAATGGAATCCTTAA
Coding sequence (CDS)
TACAACGTCTTTCAACACGAGTACAAGGACATGTTCCTTAGACTTGTGTCACCGCCCCGCCTTTCAGCACGAGTGCAGGGACATGTTCCTTGGACCTGTGCTGCCGCCACGTCATTCAGCATGAGTACAGGGACAATTGACGTCTTTGAACTCATAATCATGGTGTGCTTTGCAGAGCATATTGTCTCTGAAAAGACGTACCTTGTTCTCTTGAAACACAACAATCAAGCCCTAAGAAGCAGACTCAGCTTCTTAGTAGAAGAGCCTAAGACTGGACGGCTTGCAGCCCCATGGCCCCCACCACTAAATTTGCATACCATTTCTGATTGGTCCGTAGAAAGGCCTCTAGACCAAGATTCTAAGGCTTGGTTTCTAGAATCTTCAATCCATACAAAATATCCTAATCGACATCCAGAGGTGACGTTAGGGCGCCGAATAATTGACGGATCAGTTCGTTGGGAATCCGCCTTGAAAATTTCAAGCGAATTTCTTTTCATTCCTCGCTATTGGGAGTGCGCTTCAAGAGCTGACCATTCCCATGTTCCAATCAGCTCCTGGACTTCCTTTTGGTTCAAGGGTGAACAAAGGTACGCAAAGCCTCCTCAACGGAGACCCAGGAAGCATTCTCGCTCTAGCACGACTCATAACCCAGACAACACAAATATCAAGCGTCGCGAGTGGTCAGATGAGGAGAACAACTTGTTTCACGAGCTAAAGATTGACATGAAACACAGAGACCAGACATACTTGGCGGCGTTTTTATCTTGTTTGCTTTGCACCTTTGTGTTTCCTCAAGGGAATGCTAACCACAATCGTCCTAGTGTTTTTAAGGCTGCCAGCTTAATGGCTGAGGGGAAAACTTTCAGTCTTGCGGTCGCCAAGCCTCTAGATGATTCAACCGAAGAAGAGAGTCAAAACAGCACTGTAGATCGACATTGGAAAAGAGCCAAAAGACCCAAGAAGGGTTCTGATCTCGATGACAAGTCCATCAAGAGTGCCTCTACTGCTTCACAGACTCCTGACGACATTGGGACTTTGCCTCCTTCAAATGACCGTGTACAAGAAGAGGAAGAATGTTCGAGCGATCAATCTCTGACAAGTCCTGATGCTTTTGCTTCTTCTGTGAAGAACTTCGGAAGCTCTCATGCATCCTCGAGCAAACAAGTCGTGAATTCGTCTTCTCGTTCTACTGAGAAAGCCCCTCAACACACTCATGAGAAAGTGGTTGCCCCAGTCTTTGAAGTTTCTCAGTTCTATGCTGATGATGTAATTTCCACCTTTCGAAAGCAAGCTGCTTTCTCCATATGGACAAGCATACAACAGAAGATCGTACGCACATCTTTTGAAGATGTTGCTAGCCTCGAGCACCTTGAGCAAGAATCTCAAAAGTTGGAGGCGAAGAAACTCCACTTAGAGGAGGCTTTGTCTACCAAAGATCGTGTTGTTGAGGAGAAAGATGCGCTTCAGAAACAACTTGCTCGCTCTATCGCAGAGGTTGCAGACCTAAAGACCAAGGTTGCAGAACTAGAGGCCAAGATTGAAAGCCTTTCCAATTCGGTTTCCGAAAAGGAAAAGGACTTAGCTCATGAAAAACTTGCAGTTTCAAGAATACGTGAGGAAATTAGTGACATTGAGTGTGCCCCCACCATCAGCGCTTCAGATGTTCGCACCCTAGCGATAATTCGCGAACTTTTGGAGAGTACTCGTGACGAGCTTAAAGCACTTCAATGGAATCCTTAA
Protein sequence
YNVFQHEYKDMFLRLVSPPRLSARVQGHVPWTCAAATSFSMSTGTIDVFELIIMVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVERPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWECASRADHSHVPISSWTSFWFKGEQRYAKPPQRRPRKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTFVFPQGNANHNRPSVFKAASLMAEGKTFSLAVAKPLDDSTEEESQNSTVDRHWKRAKRPKKGSDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNFGSSHASSSKQVVNSSSRSTEKAPQHTHEKVVAPVFEVSQFYADDVISTFRKQAAFSIWTSIQQKIVRTSFEDVASLEHLEQESQKLEAKKLHLEEALSTKDRVVEEKDALQKQLARSIAEVADLKTKVAELEAKIESLSNSVSEKEKDLAHEKLAVSRIREEISDIECAPTISASDVRTLAIIRELLESTRDELKALQWNP
Homology
BLAST of Spg019078 vs. NCBI nr
Match:
KAA0055892.1 (hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 193.7 bits (491), Expect = 4.3e-45
Identity = 195/747 (26.10%), Postives = 286/747 (38.29%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 17 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 76
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWEC- 173
PL + AW L+SSIH + N TLG+R+I+G RW + K+ EF F YWEC
Sbjct: 77 IPLSKGKSAWVLQSSIHNEASNSSRAFTLGKRLIEGQTRWGTVTKVPGEFCFTDCYWECD 136
Query: 174 ------------------------------------------------------------ 233
Sbjct: 137 VVRAFCEAWCPSTNTLHTMVGELSISLWDLWSFGGLCIKGDFYVERIPSFKELTSTSRDK 196
Query: 234 ---------------------------ASRADHSHVPISSWTSFWFKGEQRYAKPPQRRP 293
S + S V I SW SFW+ G + Y KP R+
Sbjct: 197 TKCLPMTYQYLFQAYYSIVCTQRNDRSTSSKNDSQVTIGSWISFWYLGSRSYDKPTTRKK 256
Query: 294 RKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTFVFPQ 353
+K SRS +T N D + I+ REWS E+ LF EL+I +D+TYLAAFLSC LC FVFPQ
Sbjct: 257 KKVSRSKSTQNSDGSKIQAREWSSRESMLFVELRIKDDLKDETYLAAFLSCWLCLFVFPQ 316
Query: 354 GNANHNRPSVFKAASLMAEGKTFSLAV--------------------------------- 413
+ R VF+AASLMA G +SLAV
Sbjct: 317 -KGSFLRLGVFRAASLMAAGTIYSLAVPVFANIYHGLDWWTTKHVTYFEDNRHHLVSSVI 376
Query: 414 ---------------------------AKPLDDST---EEESQNSTVDRHWKRAKRPKKG 473
A L++ ++ES +S DRHWKR + K
Sbjct: 377 PPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKKHKDESDSSKSDRHWKRPLKKAKV 436
Query: 474 SDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNFGSSH 533
S D +A + P D+ L P ND ++ E +D+SL P A S+ + G+S
Sbjct: 437 S--GDHPDGRGLSALEVP-DVPPLSPLNDHLEGLIEPDNDESLMGPHAVDSAFEEVGTSK 496
Query: 534 ASSSKQVVNSSSRST--------------------------------------------E 578
+K S S S
Sbjct: 497 TPVNKPTEQSLSPSALLEEIRRGKMTVRGKDLESPSSKEGVCPKASLQKVSSAHAPLKFS 556
BLAST of Spg019078 vs. NCBI nr
Match:
TYK06200.1 (hypothetical protein E5676_scaffold287G00580 [Cucumis melo var. makuwa])
HSP 1 Score: 186.0 bits (471), Expect = 8.9e-43
Identity = 196/743 (26.38%), Postives = 292/743 (39.30%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 17 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 76
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWES------------------ 173
PL + AW L+SSIH + N TLG+R+I+G RW +
Sbjct: 77 IPLSKGKSAWVLQSSIHNEASNSSRAFTLGKRLIEGQTRWGTVTKYSFIWCRNSFFVHYD 136
Query: 174 --------------------------------------ALKISSEFLF--IPRYWE---- 233
L I +F IP + E
Sbjct: 137 HNSDVVRAFCEAWCPSTNTLHTMVGELSISLWDLWSFGGLSIKGDFYVERIPSFKELTST 196
Query: 234 -----------------------CASRADH-------SHVPISSWTSFWFKGEQRYAKPP 293
C R D S V I SW SFW+ G + Y KP
Sbjct: 197 SRDKTKCLPMTYQYLFQAYYSIVCTQRNDRSTSSKNDSQVTIGSWISFWYLGSRSYDKPT 256
Query: 294 QRRPRKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTF 353
R+ +K SRS +T NPD++ I+ REWS E+ LF EL+I +D+TYLAAFLSC LC F
Sbjct: 257 TRKQKKVSRSKSTENPDDSKIQAREWSSRESMLFVELRIKDDLKDETYLAAFLSCWLCLF 316
Query: 354 VFPQGNANHNRPSVFKAASLMAEGKTFSLAV----------------------------- 413
VFPQ + RP VF+AASLMA G +SLAV
Sbjct: 317 VFPQ-KGSFIRPGVFRAASLMAAGIIYSLAVPVFANIYHGLDWWTTKHVTYFEDNRHHLV 376
Query: 414 -------------------------------AKPLDDST---EEESQNSTVDRHWKRAKR 473
A L++ ++ES +S DRHWKR +
Sbjct: 377 SSVIPLPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKKHKDESDSSKSDRHWKRPLK 436
Query: 474 PKKGSDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNF 533
K S D +A + P D+ L P ND ++ E +D+SL P A S+ +
Sbjct: 437 KAKVS--GDHPDGRGLSALEVP-DVPPLSPLNDHLEGLIEPDNDESLMGPHAVDSTFEEV 496
Query: 534 GSS-------HASSSKQVV--NSSSRSTEKA---------PQHTHEKVVAPVFEVSQFYA 578
G + SSK+ V +S + A P K E SQ
Sbjct: 497 GKMTVRGKDLESPSSKEGVCPKASLQKVSSAHAPLKFSELPLGASNKKTTRNPEPSQSVG 556
BLAST of Spg019078 vs. NCBI nr
Match:
KAA0052363.1 (hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa])
HSP 1 Score: 176.0 bits (445), Expect = 9.3e-40
Identity = 202/831 (24.31%), Postives = 298/831 (35.86%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWE-- 173
L + AW L+SSIH + PN +TLG+R+I+G RW + K+ EF FI YWE
Sbjct: 61 VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120
Query: 174 ------------------------------------------------------------ 233
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
Query: 234 ------------------CASRADH-------SHVPISSWTSFWFKGEQRYAKPPQRRPR 293
C R D S V I SW SFW+ G + Y KP R+ +
Sbjct: 181 DLWSFGGLPIKGAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSKSYDKPTTRKQK 240
Query: 294 KHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTFVFPQG 353
K SRS +T NP+ + I+ REWS E+ LF EL I +D+TYLAAFLSC LC FVFPQ
Sbjct: 241 KASRSKSTQNPNGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQ- 300
Query: 354 NANHNRPSVFKAASLMAEGKTFSLAV----------------AKPL-------------- 413
+ RP VF+ ASLMA G +SLAV + P+
Sbjct: 301 KGSFLRPGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 360
Query: 414 ------------------------------------------------------------ 473
Sbjct: 361 WNKHERMVDTHDSSFLQMSYFDLPNDIGGMPPAITLDNILYHWRIYWWTTKHGTYFEDNR 420
Query: 474 ----------------------------------------DDSTEEESQNSTVDRHWKRA 533
D+ E ES ++ DRHWKR
Sbjct: 421 HYLVSSAIPRPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWKRP 480
Query: 534 KRPKKGSDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVK 578
+ K S D +A + P D+ L P NDR++ E SD+SLT P A S+ +
Sbjct: 481 LKKAKVS--GDHPDGRGLSALEVP-DVPPLSPLNDRLEGLIEPDSDESLTGPHAVDSAFE 540
BLAST of Spg019078 vs. NCBI nr
Match:
TYK05702.1 (putative mitochondrial protein [Cucumis melo var. makuwa])
HSP 1 Score: 174.1 bits (440), Expect = 3.5e-39
Identity = 135/399 (33.83%), Postives = 175/399 (43.86%), Query Frame = 0
Query: 82 LSFLVEEPKTGRLAAPWPPPLNLHTISDWSVERPLDQDSKAWFLESSIHTKYPNRHPEVT 141
LS LVE+P G A WP N + SVE PL + AW L+SSIH + PN +T
Sbjct: 20 LSLLVEKPWPGAFADHWPRLDNNSVLPRLSVEIPLSEGKSAWVLQSSIHNEAPNSGRALT 79
Query: 142 LGRRIIDGSVRWESALKISSEFLFIPRYWECASRADH-------SHVPISSWTSFWFKGE 201
LG+R+I+G RW + K+ EF F YWE R D S V I SW SFW+ G
Sbjct: 80 LGQRLIEGQTRWGTVTKVPEEFCFTDCYWEWLERNDRSTSSKNDSQVTIGSWISFWYLGL 139
Query: 202 QRYAKPPQRRPRKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFL 261
+ Y KP R+ +K SRS +T N D I+ REWS E+ LF EL I +D+ YL AFL
Sbjct: 140 RSYDKPTTRKQKKASRSKSTQNSDGWRIQAREWSPRESMLFTELGIRDDLKDEMYLVAFL 199
Query: 262 SCLLCTFVFPQGNANHNRPSVFKAASLMAEGKTFSLAV---------------AKPLDD- 321
SC LC FVF Q + RP VF+AASLMA +SLAV A LD+
Sbjct: 200 SCWLCLFVFLQ-KGSFLRPGVFRAASLMATDTIYSLAVPVSVNIYHGLGDMPPAITLDNI 259
Query: 322 ------------------------------------------------------------ 381
Sbjct: 260 LYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLALTPNLEE 319
Query: 382 ---STEEESQNSTVDRHWKRAKRPKK--GSDLDDKSIKSASTASQTPDDIGTLPPSNDRV 393
++ES +S DRHWKR + K G + D++ + + D+ L P ND +
Sbjct: 320 EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGV-----PDVPPLSPLNDHL 379
BLAST of Spg019078 vs. NCBI nr
Match:
TYK20969.1 (hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa])
HSP 1 Score: 174.1 bits (440), Expect = 3.5e-39
Identity = 115/326 (35.28%), Postives = 143/326 (43.87%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWE-- 173
L + AW L+SSIH + PN +TLG+R+I+G RW + K+ EF FI YWE
Sbjct: 61 VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120
Query: 174 ------------------------------------------------------------ 233
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
Query: 234 ------------------CASRADH-------SHVPISSWTSFWFKGEQRYAKPPQRRPR 293
C R D S V I SW SFW+ G + Y KP R+ +
Sbjct: 181 DLWSFGGLPIKGAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSKSYDKPTTRKQK 240
BLAST of Spg019078 vs. ExPASy TrEMBL
Match:
A0A5A7UJ48 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold438G00100 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 2.1e-45
Identity = 195/747 (26.10%), Postives = 286/747 (38.29%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 17 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 76
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWEC- 173
PL + AW L+SSIH + N TLG+R+I+G RW + K+ EF F YWEC
Sbjct: 77 IPLSKGKSAWVLQSSIHNEASNSSRAFTLGKRLIEGQTRWGTVTKVPGEFCFTDCYWECD 136
Query: 174 ------------------------------------------------------------ 233
Sbjct: 137 VVRAFCEAWCPSTNTLHTMVGELSISLWDLWSFGGLCIKGDFYVERIPSFKELTSTSRDK 196
Query: 234 ---------------------------ASRADHSHVPISSWTSFWFKGEQRYAKPPQRRP 293
S + S V I SW SFW+ G + Y KP R+
Sbjct: 197 TKCLPMTYQYLFQAYYSIVCTQRNDRSTSSKNDSQVTIGSWISFWYLGSRSYDKPTTRKK 256
Query: 294 RKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTFVFPQ 353
+K SRS +T N D + I+ REWS E+ LF EL+I +D+TYLAAFLSC LC FVFPQ
Sbjct: 257 KKVSRSKSTQNSDGSKIQAREWSSRESMLFVELRIKDDLKDETYLAAFLSCWLCLFVFPQ 316
Query: 354 GNANHNRPSVFKAASLMAEGKTFSLAV--------------------------------- 413
+ R VF+AASLMA G +SLAV
Sbjct: 317 -KGSFLRLGVFRAASLMAAGTIYSLAVPVFANIYHGLDWWTTKHVTYFEDNRHHLVSSVI 376
Query: 414 ---------------------------AKPLDDST---EEESQNSTVDRHWKRAKRPKKG 473
A L++ ++ES +S DRHWKR + K
Sbjct: 377 PPPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKKHKDESDSSKSDRHWKRPLKKAKV 436
Query: 474 SDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNFGSSH 533
S D +A + P D+ L P ND ++ E +D+SL P A S+ + G+S
Sbjct: 437 S--GDHPDGRGLSALEVP-DVPPLSPLNDHLEGLIEPDNDESLMGPHAVDSAFEEVGTSK 496
Query: 534 ASSSKQVVNSSSRST--------------------------------------------E 578
+K S S S
Sbjct: 497 TPVNKPTEQSLSPSALLEEIRRGKMTVRGKDLESPSSKEGVCPKASLQKVSSAHAPLKFS 556
BLAST of Spg019078 vs. ExPASy TrEMBL
Match:
A0A5D3C4E5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00580 PE=4 SV=1)
HSP 1 Score: 186.0 bits (471), Expect = 4.3e-43
Identity = 196/743 (26.38%), Postives = 292/743 (39.30%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 17 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 76
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWES------------------ 173
PL + AW L+SSIH + N TLG+R+I+G RW +
Sbjct: 77 IPLSKGKSAWVLQSSIHNEASNSSRAFTLGKRLIEGQTRWGTVTKYSFIWCRNSFFVHYD 136
Query: 174 --------------------------------------ALKISSEFLF--IPRYWE---- 233
L I +F IP + E
Sbjct: 137 HNSDVVRAFCEAWCPSTNTLHTMVGELSISLWDLWSFGGLSIKGDFYVERIPSFKELTST 196
Query: 234 -----------------------CASRADH-------SHVPISSWTSFWFKGEQRYAKPP 293
C R D S V I SW SFW+ G + Y KP
Sbjct: 197 SRDKTKCLPMTYQYLFQAYYSIVCTQRNDRSTSSKNDSQVTIGSWISFWYLGSRSYDKPT 256
Query: 294 QRRPRKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTF 353
R+ +K SRS +T NPD++ I+ REWS E+ LF EL+I +D+TYLAAFLSC LC F
Sbjct: 257 TRKQKKVSRSKSTENPDDSKIQAREWSSRESMLFVELRIKDDLKDETYLAAFLSCWLCLF 316
Query: 354 VFPQGNANHNRPSVFKAASLMAEGKTFSLAV----------------------------- 413
VFPQ + RP VF+AASLMA G +SLAV
Sbjct: 317 VFPQ-KGSFIRPGVFRAASLMAAGIIYSLAVPVFANIYHGLDWWTTKHVTYFEDNRHHLV 376
Query: 414 -------------------------------AKPLDDST---EEESQNSTVDRHWKRAKR 473
A L++ ++ES +S DRHWKR +
Sbjct: 377 SSVIPLPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEEEVKKHKDESDSSKSDRHWKRPLK 436
Query: 474 PKKGSDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVKNF 533
K S D +A + P D+ L P ND ++ E +D+SL P A S+ +
Sbjct: 437 KAKVS--GDHPDGRGLSALEVP-DVPPLSPLNDHLEGLIEPDNDESLMGPHAVDSTFEEV 496
Query: 534 GSS-------HASSSKQVV--NSSSRSTEKA---------PQHTHEKVVAPVFEVSQFYA 578
G + SSK+ V +S + A P K E SQ
Sbjct: 497 GKMTVRGKDLESPSSKEGVCPKASLQKVSSAHAPLKFSELPLGASNKKTTRNPEPSQSVG 556
BLAST of Spg019078 vs. ExPASy TrEMBL
Match:
A0A5A7U8X8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold207G002060 PE=4 SV=1)
HSP 1 Score: 176.0 bits (445), Expect = 4.5e-40
Identity = 202/831 (24.31%), Postives = 298/831 (35.86%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWE-- 173
L + AW L+SSIH + PN +TLG+R+I+G RW + K+ EF FI YWE
Sbjct: 61 VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120
Query: 174 ------------------------------------------------------------ 233
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
Query: 234 ------------------CASRADH-------SHVPISSWTSFWFKGEQRYAKPPQRRPR 293
C R D S V I SW SFW+ G + Y KP R+ +
Sbjct: 181 DLWSFGGLPIKGAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSKSYDKPTTRKQK 240
Query: 294 KHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFLSCLLCTFVFPQG 353
K SRS +T NP+ + I+ REWS E+ LF EL I +D+TYLAAFLSC LC FVFPQ
Sbjct: 241 KASRSKSTQNPNGSKIQAREWSSRESMLFAELGIRDDLKDETYLAAFLSCWLCLFVFPQ- 300
Query: 354 NANHNRPSVFKAASLMAEGKTFSLAV----------------AKPL-------------- 413
+ RP VF+ ASLMA G +SLAV + P+
Sbjct: 301 KGSFLRPGVFRVASLMAAGTIYSLAVPVLANIYHGLGLITKASNPIGRMDFHFPMHYVHG 360
Query: 414 ------------------------------------------------------------ 473
Sbjct: 361 WNKHERMVDTHDSSFLQMSYFDLPNDIGGMPPAITLDNILYHWRIYWWTTKHGTYFEDNR 420
Query: 474 ----------------------------------------DDSTEEESQNSTVDRHWKRA 533
D+ E ES ++ DRHWKR
Sbjct: 421 HYLVSSAIPRPSQPRLPKNRGSNLGGKEIRLVEAMAPNLEDEVNEHESDSNKSDRHWKRP 480
Query: 534 KRPKKGSDLDDKSIKSASTASQTPDDIGTLPPSNDRVQEEEECSSDQSLTSPDAFASSVK 578
+ K S D +A + P D+ L P NDR++ E SD+SLT P A S+ +
Sbjct: 481 LKKAKVS--GDHPDGRGLSALEVP-DVPPLSPLNDRLEGLIEPDSDESLTGPHAVDSAFE 540
BLAST of Spg019078 vs. ExPASy TrEMBL
Match:
A0A5D3C3B2 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001830 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 1.7e-39
Identity = 135/399 (33.83%), Postives = 175/399 (43.86%), Query Frame = 0
Query: 82 LSFLVEEPKTGRLAAPWPPPLNLHTISDWSVERPLDQDSKAWFLESSIHTKYPNRHPEVT 141
LS LVE+P G A WP N + SVE PL + AW L+SSIH + PN +T
Sbjct: 20 LSLLVEKPWPGAFADHWPRLDNNSVLPRLSVEIPLSEGKSAWVLQSSIHNEAPNSGRALT 79
Query: 142 LGRRIIDGSVRWESALKISSEFLFIPRYWECASRADH-------SHVPISSWTSFWFKGE 201
LG+R+I+G RW + K+ EF F YWE R D S V I SW SFW+ G
Sbjct: 80 LGQRLIEGQTRWGTVTKVPEEFCFTDCYWEWLERNDRSTSSKNDSQVTIGSWISFWYLGL 139
Query: 202 QRYAKPPQRRPRKHSRSSTTHNPDNTNIKRREWSDEENNLFHELKIDMKHRDQTYLAAFL 261
+ Y KP R+ +K SRS +T N D I+ REWS E+ LF EL I +D+ YL AFL
Sbjct: 140 RSYDKPTTRKQKKASRSKSTQNSDGWRIQAREWSPRESMLFTELGIRDDLKDEMYLVAFL 199
Query: 262 SCLLCTFVFPQGNANHNRPSVFKAASLMAEGKTFSLAV---------------AKPLDD- 321
SC LC FVF Q + RP VF+AASLMA +SLAV A LD+
Sbjct: 200 SCWLCLFVFLQ-KGSFLRPGVFRAASLMATDTIYSLAVPVSVNIYHGLGDMPPAITLDNI 259
Query: 322 ------------------------------------------------------------ 381
Sbjct: 260 LYHWRICTRRNTLSELYLSVRKLEPCKHVTQQFTDWWTTRHRTYFEDNRHPLALTPNLEE 319
Query: 382 ---STEEESQNSTVDRHWKRAKRPKK--GSDLDDKSIKSASTASQTPDDIGTLPPSNDRV 393
++ES +S DRHWKR + K G + D++ + + D+ L P ND +
Sbjct: 320 EVKEHKDESDSSKSDRHWKRPLKKAKVSGDNPDERGLSAFGV-----PDVPPLSPLNDHL 379
BLAST of Spg019078 vs. ExPASy TrEMBL
Match:
A0A5D3DCE5 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18270G00010 PE=4 SV=1)
HSP 1 Score: 174.1 bits (440), Expect = 1.7e-39
Identity = 115/326 (35.28%), Postives = 143/326 (43.87%), Query Frame = 0
Query: 54 MVCFAEHIVSEKTYLVLLKHNNQALRSRLSFLVEEPKTGRLAAPWPPPLNLHTISDWSVE 113
MV F E +S +LV+L NQ LS +VE+P G A WP N + SVE
Sbjct: 1 MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFANHWPRLDNNSVLPRLSVE 60
Query: 114 RPLDQDSKAWFLESSIHTKYPNRHPEVTLGRRIIDGSVRWESALKISSEFLFIPRYWE-- 173
L + AW L+SSIH + PN +TLG+R+I+G RW + K+ EF FI YWE
Sbjct: 61 VHLSEGKSAWVLQSSIHIEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFIDCYWEWL 120
Query: 174 ------------------------------------------------------------ 233
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDCNSDVVRAFCEAWCPSTNTLHTMAGELSISLW 180
Query: 234 ------------------CASRADH-------SHVPISSWTSFWFKGEQRYAKPPQRRPR 293
C R D S V I SW SFW+ G + Y KP R+ +
Sbjct: 181 DLWSFGGLPIKGAYYSIVCTQRNDRSASSKNDSQVTIGSWISFWYLGSKSYDKPTTRKQK 240
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0055892.1 | 4.3e-45 | 26.10 | hypothetical protein E6C27_scaffold438G00100 [Cucumis melo var. makuwa] | [more] |
TYK06200.1 | 8.9e-43 | 26.38 | hypothetical protein E5676_scaffold287G00580 [Cucumis melo var. makuwa] | [more] |
KAA0052363.1 | 9.3e-40 | 24.31 | hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa] | [more] |
TYK05702.1 | 3.5e-39 | 33.83 | putative mitochondrial protein [Cucumis melo var. makuwa] | [more] |
TYK20969.1 | 3.5e-39 | 35.28 | hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UJ48 | 2.1e-45 | 26.10 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5D3C4E5 | 4.3e-43 | 26.38 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
A0A5A7U8X8 | 4.5e-40 | 24.31 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
A0A5D3C3B2 | 1.7e-39 | 33.83 | Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
A0A5D3DCE5 | 1.7e-39 | 35.28 | PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... | [more] |
Match Name | E-value | Identity | Description | |