Spg018880 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGCGAAGTGCTTTGATTCTTCAGTTGATGAGTTTGACTCTGATGATTCATCTATTGGCTGTCTCCGACGAGTTTTTCAAGCCTTTCAATGTGAGCTATGACCATAGGGCTCTGATCATTGATGGAAAACTCCGCATGCTTATCTTCGCCGGTGTTCATTATCCCCGCCCCACCCCGGAGGTAATTTGGCGATTCTTCTATTCTTGCCGTTTTATTTACCGTCTTTTTATCAATTCAGTTCTACCTTTTAAATTGATCACACTGGCTAAATTGGTTGAGTGATCGATTTGGTTGTATGTTTTTACATGATCATAGATGTGGCCTGATCATATTTTGGTTATATCTTTTTACATGATCACAGATGTGGCCTAATATAATTGAGAAGAACAAGGAAGGTGGGGCGGATGTCATTCAAAGTTACGTGTTTTGGAATGGTCATGAACCAATGAAGGGACAGGGGACAGGTTCAGTAAATTTTTTGCAAGATAGTCCAGTCGTCGTGTGCGTAGTAGTTTGCTTGATAACTTGAATATATTTACATTTTTTTCCATTTCAGTATAACTTTGATGGGAGATATGACCTTGTCAAATTTATAAGGCTGGTAGGATCCAGTGGCCTCTACCTTCATTTACGCATTGGACCATACGTGTGTGCAGAGTGGAGTTTCGGGTATATACTCCTGTCATCCATTATTTTTTTTGAAAGATCTGCATCATTGAATCTGGTGAAGAGGAACTCGAAGAAATCTTGGAAACTTCAATGATGGATGAGATTTTGGATTTCAAGGGTTTTTTTTTTAAGCTCAAACTGCAACTTGCAAGTTGACTTCAGTTAGGTGAATTAGCCTAAATCTAAAGAATAATAAAATTCCATGGTCTTTGTATAATGGGAAAACCTCAAAACCTCAAAAGAGAGAAAAACAGCTTCTTTTCTCGAGAATTGAATCACTCAATCGGTACCCACTCTCCAATGTGATCATAATTCTTGCTTCTCTTTTTCAATTTTTATGAATCTATTTGTGTTGTTTGATTTTGATTCATTTTTCTTCTCATTTGGGTTTCTTGAATTCTCAAAGTTCCAGCCGTCATCTTCAACTCCAAATTCTATGTCACTTGGGTTTCTTGTCTTCAACTACAAATGTCATTTCATTTGGGTTTCTTGAATTTGGGTTTATTGGTTTTGGTTAGATTGTTGTTGTACTGGAGACCTTTCTATATTTTTATTTGATATTGAAGTCATTTCAAAATATTAAAATATAGGTCATTCTCAAGACAGATATGATTGAAAGATAAGATTGATAAATTAAATTTCAAATTCATAAATACATACTTTCAGAATTTTCAGACACAACTTTTCAAAAATACATCCTTTCAAATTATACAAACACATCTTTCCACAAAATAAAATACAACTAATTCTATTTAAAAATGGTTAGTAAATTAAATTTAAAATTCATATATACACATCCTTTCACCAATTAAATACAAATCATTAGACACATATCCTTTCACCCATTAAATACAAATCATTTTGTTTTCATTTGGCCAAAACTTTCTTTTCAAAATGTCAAATGAGAAGAAGATGGTTTCTTTTATAAGAGAGCTTCAAGCCTTTCAAAGAGAATGAAAGTTAAAAGTTTTCGTTCTTCATAAAGGAAACGTTGAATCATGTCAAAATGACGCTTTGAGAATACAAAAGTTTATTTTCGCCGATGAAGAGGTAGCATTTTTATCTTCAAATGTTAGTATTTATCCATTGTTATTCAAATTTAGCAATACAAATCATGGATGATGGTATTTTCTTCTCTGTTTTAAATCATGTTCCACTTTACACTTTCTACGGTTGCACAGTTTACTGGATTATATCTTACGAGTTTAGTGTGAGAGAAAGAGAAAATGTGGGTTTTTTGGTTAAATCTTTATGGTATGGAGACTAATTTGATTGACAATCTTAACTAATATTCTATGAGTGAAATACACAGTGGAAATCAAAATTCAAATACTCTATTTTAAAATTTCTTCAATTTGTTTACAGGGATAAAAAGTTCAAGCAGTGATGTTCATCGAAGTTATAGAAATTAAACCATTGGAAATGGTATTCTAAGGAATAAATATTATTTTATTGAAAATGGAAATGTGAAAACTGTGAATTCCAAATATGCAAATGTAAATGAAGAAATTGAAATGACTCTGTCTTCATCGACGATGATCGAAGAAATTGAAGAACCATTTCCTCTTCATAATTTGAAGTATAATTTCATTCAATTTTCTGAGATGAAATCATTTGTTATGACAGGAAAAACGATAGGTAACATTTTTTTTCAGAAAAAAGTTATAGTAAATTTAGATATTATACAATTTTTTTCATGTTAATTCTCCACCTATTTGTGCAGATTTTGTTGGAATTGCGTTCTCTGTGAGATCCATGGTTGAAATAAAAATAAAAATTCAAACAATAAAACAATGATGAAGAGAGAAATATTTTTGATAGAGCAAAGGTTAGCAACTATTTCAATATATGTTTTCTTTACAAAAATTAATTATTTCATGGTTGTTTTATGTTAACATGTGGTAATTTATTTTGTAGTTGCAAGCCAATTAAACTGACGCTAGAGAATGATTTGGCTACCAATGAAGGTTCAGAATTAGAAGAACAAATTATTGACAACCCAATAATTTTAGCATTCAATCTTAAGGTAGATATGTATGAAGGTAAGCTTTAAAAATTCAATATAACAGTAAGATATAACATTAATATAAGGGGGAGAAGAATTTATAATTTAACTTTTTTTTTCCTTATGTTAGGAGAATTAAGCATGACAACAACAGTGACGAGCAACATTTTAATTCAACTAGATTTTATAGATTCAAAAGATCTAAAAGAAAGGTATTCGTCCATATATCTCTAATTTTGAAATTTGCATTTATTCTTAAATTAACCTCTACATTTATACTACTATTTTTTGTAGGAGGGAAATTCTTTTGGATCATTCAAACATGTCTACTTTTATTCCTCCCTCTAAAATAAATGGAAAGAGCAAAATTAGTAAGCATCAAAGATATTATTCATGGGTTAGTTGATGATTTATATTGTTTTATCATTGCCTCAATTGTTGAGATAGTTAACAAAGACAATCCATGGTTTGAGAAATGCAAACTTCGCAACCATAGAGTTTACCCCAATGGAAGTCAGAAAATGACTCACTCTAACAATTGCAACGATCTTGTCCAATTCATAAGAAAATATATGCTAAAGCTTATGTTTCTGATGGGCAAATGACTGCACATATAACTGCTTTTGAGGTTGCAGAAGTCATAGTTGGATGTAGTGTTTCCCATTATGCAACCCAAATTTTGGAGGTAATCATAAGAAGCATGAATTTATTTCTTAAATAAATCCCCTCTATACTTTTATCTAACATTTTATATTTGTCGTTTACCAAGCTCAGATGAAAAGGAGGATTCTAAAATTTATCGCAATTTCATCCTCGCACAAGGAAAAACTTACAAGTTCCTCATTCGCATGGACAAGAAGTCTAAAGGAGATCGATCAAAGGGGCATTTTGTGGTTCAAGAGATAAATAAAGCACAAGTTGAAGAATGTGACGCTCTTGAAGTTTTACATGTTAAGAAAAAAATTAAAATAGAAAGATAGTTTCAAAGTTTTTTTTAATATATTTTTCACTTTTTTTTGTTACTTTAAACGATCCACATGTAATGTTAACTATCATATTTCGACTTTGCTACTTTTAGTTTTTCAGTAGTTTTCTTATTTTAGTGGCATAATCATAAATGATCTTTAGGGGGCATGAAATGTCCAATTACATTGTAAATTTCTTAATG ATGGCGGTGCGAAGTGCTTTGATTCTTCAGTTGATGAGTTTGACTCTGATGATTCATCTATTGGCTGTCTCCGACGAGTTTTTCAAGCCTTTCAATGTGAGCTATGACCATAGGGCTCTGATCATTGATGGAAAACTCCGCATGCTTATCTTCGCCGGTGTTCATTATCCCCGCCCCACCCCGGAGATGTGGCCTAATATAATTGAGAAGAACAAGGAAGGTGGGGCGGATGTCATTCAAAGTTACGTGTTTTGGAATGGTCATGAACCAATGAAGGGACAGGGGACAGGTTCAGTAAATTTTTTGCAAGATAGTCCAGTCGTCGTGCTGGTAGGATCCAGTGGCCTCTACCTTCATTTACGCATTGGACCATACGTGTGTGCAGAGTGGAGTTTCGGGAAAAACGATAGTTGCAAGCCAATTAAACTGACGCTAGAGAATGATTTGGCTACCAATGAAGGTTCAGAATTAGAAGAACAAATTATTGACAACCCAATAATTTTAGCATTCAATCTTAAGGTAGATATGTATGAAGCTTATGTTTCTGATGGGCAAATGACTGCACATATAACTGCTTTTGAGGTTGCAGAAGTCATAGTTGGATATGAAAAGGAGGATTCTAAAATTTATCGCAATTTCATCCTCGCACAAGGAAAAACTTACAAGTTCCTCATTCGCATGGACAAGAAGTCTAAAGGAGATCGATCAAAGGGGCATTTTGTGGTTCAAGAGATAAATAAAGCACAAGTTGAAGAATGTGACGCTCTTGAAGTTTTACATGTTAAGAAAAAAATTAAAATAGAAAGATAG ATGGCGGTGCGAAGTGCTTTGATTCTTCAGTTGATGAGTTTGACTCTGATGATTCATCTATTGGCTGTCTCCGACGAGTTTTTCAAGCCTTTCAATGTGAGCTATGACCATAGGGCTCTGATCATTGATGGAAAACTCCGCATGCTTATCTTCGCCGGTGTTCATTATCCCCGCCCCACCCCGGAGATGTGGCCTAATATAATTGAGAAGAACAAGGAAGGTGGGGCGGATGTCATTCAAAGTTACGTGTTTTGGAATGGTCATGAACCAATGAAGGGACAGGGGACAGGTTCAGTAAATTTTTTGCAAGATAGTCCAGTCGTCGTGCTGGTAGGATCCAGTGGCCTCTACCTTCATTTACGCATTGGACCATACGTGTGTGCAGAGTGGAGTTTCGGGAAAAACGATAGTTGCAAGCCAATTAAACTGACGCTAGAGAATGATTTGGCTACCAATGAAGGTTCAGAATTAGAAGAACAAATTATTGACAACCCAATAATTTTAGCATTCAATCTTAAGGTAGATATGTATGAAGCTTATGTTTCTGATGGGCAAATGACTGCACATATAACTGCTTTTGAGGTTGCAGAAGTCATAGTTGGATATGAAAAGGAGGATTCTAAAATTTATCGCAATTTCATCCTCGCACAAGGAAAAACTTACAAGTTCCTCATTCGCATGGACAAGAAGTCTAAAGGAGATCGATCAAAGGGGCATTTTGTGGTTCAAGAGATAAATAAAGCACAAGTTGAAGAATGTGACGCTCTTGAAGTTTTACATGTTAAGAAAAAAATTAAAATAGAAAGATAG MAVRSALILQLMSLTLMIHLLAVSDEFFKPFNVSYDHRALIIDGKLRMLIFAGVHYPRPTPEMWPNIIEKNKEGGADVIQSYVFWNGHEPMKGQGTGSVNFLQDSPVVVLVGSSGLYLHLRIGPYVCAEWSFGKNDSCKPIKLTLENDLATNEGSELEEQIIDNPIILAFNLKVDMYEAYVSDGQMTAHITAFEVAEVIVGYEKEDSKIYRNFILAQGKTYKFLIRMDKKSKGDRSKGHFVVQEINKAQVEECDALEVLHVKKKIKIER Homology
BLAST of Spg018880 vs. NCBI nr
Match: XP_022974993.1 (beta-galactosidase 9 isoform X1 [Cucurbita maxima] >XP_022974995.1 beta-galactosidase 9 isoform X2 [Cucurbita maxima]) HSP 1 Score: 211.8 bits (538), Expect = 7.1e-51 Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of Spg018880 vs. NCBI nr
Match: XP_022974996.1 (beta-galactosidase 9 isoform X3 [Cucurbita maxima]) HSP 1 Score: 211.8 bits (538), Expect = 7.1e-51 Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of Spg018880 vs. NCBI nr
Match: XP_038874249.1 (beta-galactosidase 9 isoform X1 [Benincasa hispida]) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-50 Identity = 107/135 (79.26%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of Spg018880 vs. NCBI nr
Match: XP_038874282.1 (beta-galactosidase 9 isoform X3 [Benincasa hispida]) HSP 1 Score: 211.1 bits (536), Expect = 1.2e-50 Identity = 107/135 (79.26%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of Spg018880 vs. NCBI nr
Match: XP_023540613.1 (beta-galactosidase 9 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209.9 bits (533), Expect = 2.7e-50 Identity = 108/135 (80.00%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy Swiss-Prot
Match: Q9SCV3 (Beta-galactosidase 9 OS=Arabidopsis thaliana OX=3702 GN=BGAL9 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.4e-41 Identity = 82/128 (64.06%), Postives = 102/128 (79.69%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy Swiss-Prot
Match: Q0INM3 (Beta-galactosidase 15 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0429200 PE=2 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 5.1e-36 Identity = 69/107 (64.49%), Postives = 82/107 (76.64%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy Swiss-Prot
Match: Q9SCW1 (Beta-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=BGAL1 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.4e-32 Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy Swiss-Prot
Match: A2X2H7 (Beta-galactosidase 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006270 PE=3 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31 Identity = 61/101 (60.40%), Postives = 78/101 (77.23%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy Swiss-Prot
Match: Q6Z6K4 (Beta-galactosidase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0219200 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 1.7e-31 Identity = 61/101 (60.40%), Postives = 78/101 (77.23%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy TrEMBL
Match: A0A6J1IFF4 (Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111473860 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 3.4e-51 Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy TrEMBL
Match: A0A6J1ICZ0 (Beta-galactosidase OS=Cucurbita maxima OX=3661 GN=LOC111473860 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 3.4e-51 Identity = 109/135 (80.74%), Postives = 115/135 (85.19%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy TrEMBL
Match: A0A0A0L9D3 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_3G130270 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50 Identity = 105/135 (77.78%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy TrEMBL
Match: A0A5D3D1C9 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002830 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 4.9e-50 Identity = 105/135 (77.78%), Postives = 113/135 (83.70%), Query Frame = 0
BLAST of Spg018880 vs. ExPASy TrEMBL
Match: A0A5A7U690 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003730 PE=3 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 4.9e-50 Identity = 105/135 (77.78%), Postives = 113/135 (83.70%), Query Frame = 0
BLAST of Spg018880 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 ) HSP 1 Score: 171.4 bits (433), Expect = 9.9e-43 Identity = 82/128 (64.06%), Postives = 102/128 (79.69%), Query Frame = 0
BLAST of Spg018880 vs. TAIR 10
Match: AT2G32810.2 (beta galactosidase 9 ) HSP 1 Score: 171.4 bits (433), Expect = 9.9e-43 Identity = 82/128 (64.06%), Postives = 102/128 (79.69%), Query Frame = 0
BLAST of Spg018880 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 ) HSP 1 Score: 140.2 bits (352), Expect = 2.4e-33 Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 0
BLAST of Spg018880 vs. TAIR 10
Match: AT3G52840.1 (beta-galactosidase 2 ) HSP 1 Score: 137.1 bits (344), Expect = 2.1e-32 Identity = 64/105 (60.95%), Postives = 78/105 (74.29%), Query Frame = 0
BLAST of Spg018880 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 ) HSP 1 Score: 136.3 bits (342), Expect = 3.5e-32 Identity = 63/131 (48.09%), Postives = 93/131 (70.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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