Spg018818 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018818
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 13310132 .. 13314214 (-)
RNA-Seq Expression	Spg018818
Synteny	Spg018818

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGACTCACAAAATCCCTCTCTCGCCGGTTATGCTGACGATGCTCCTCCATCTTCGCCGGAGGTGGAAGGGCCGCATAGGGACATCATTATCTCATCGCATGAAGAACACGATAACCGGCAAGACGATGACCACATGGAGGAAGATGAAGCAGAGGTCATCGATGGGGAACAACCCATCGAAAGCTTGGAAACTCCACTCACCGCCGATCCATCATCCTCCGGAGCGAACACCACTGAAGTTCTTGACGTCACACCACTGGACACCTCAACCATCAACATACAGCCAGTAAACCTCCAACCCGCACAAAATATCCTCGGCCCACGTAACCTAACTCCATTTTCCTCTCCTTTCCCGTCCGTTTCCATTCTTCCACCTCCCAACTCTTCCACTGCCCTGGCCCCAAACACCACCCCTTCCTCTTCCTCCACCCCCGCGACCGTTTCCATGTCCCTCCCACCATCCACTTCCACAAATCCTACTCTCCCGCAGTTCTCTGAGCGGGAAGTCGCCGCATGGAACTCTCTGATGGGAGAACTGGGCGAGGAAGGCGAAGCAATTCTTCTGCGAGAAGAGCAAGAAAAGGCTGTCGCAGAGGAAAATGCACGCAAGGCCGCCGCAGATGACACAGCGGCCAAAGAAAAAGAGGGCTCCAGCAAGCACGTGGAAGATCCGGTTGTCGTAGAAATTGCCGCAACCAACATAGCAATCATTGCGACAGCTCTAGACGTTGAAGCCTCTAATTTCGAGGATGAGCTCCCCCTTACTCATCACCGCAACATCCAGTCCACGGGGGTAGTCATCCGCGAGCCCTCTGAAAGACCTGTGGTAGCCCCCAGCAAGAAAAGGAAAGCGCCCACTGAAGGATTGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCGTAATTAATTTTGTTTAATCTAAAATATCAATACATTGGCAATAATATTATAACTATTCTAAATTTATATTAAGGCTAAGCATACAAAAATATTAGATCTAAATCTAATTAATATAGTAACAAATTACTTACTCTCGTTGACGACTCAGATTAAATTCACCAATTGCTTGTGAATTAATCACGAACTAGTGTGAACACCACCACTATGGCTACACCGATATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAGTAGGAGAATGAATGTGATGCCTTTCACCACACCCTAGGGGTCCTATTTATAGGTAAAGGCCAAGACATTTTTCCTAATAGGAAAAGGAAGACCCTTTCCTATTAGGAAAAGGTCTCTAATTTTAATAAATAATTAATTAATTCCATAATTAATTAATTTCCCTAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTTTCCTAATAGGAAAAGGTCTCTAATTTTAATAAATAATTAATTAATTCCATAATTAATTAATTTACCCAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAAATTAAAATTAATATGAATCCAATTCATATTAAATTTATTTGAACTCTTTCAAATATTTTCTCTCAAGAATTAATTTTTGAATTTAAATCAAAAATTATATTATAAAGTTTCATAAACTTTATATTATAATGCATCAATATACATTATACGATTCCCCAAATAAATTGAACACTTTCAATTTACAATTTATACTTAATTGCCTCAAGTCTCTTTTACGAGCTACGAGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATTGGCCAAACTCATTAACCAAGTTTAGTCAACATTCGTTAACTGTGGGTCACTCCACTAAAGACCCACAGCTGCACTCTTCTCACTGTAGAATATTTCAGTGTCCACGGATATCGACCAAGCAGTAAGTCAATCCTTCACGTGTGTTCGTAACACCAGCTGGGTCAAATTACCGTTTTACCCCTGGGTTACCTCTGGTTCCTTAAGTACCACTGATTCCTCTAATGAACAAGTTGTTTAGGGTCCAACCACTAAACAGGAGTTCCTTTCGGGCCAGGAGAGGACGACGCGCCTTTGTTCAAGCCCCGGAATTAGCCCTTAAGGGAACACACATCTACTTACCTCAATAGGGGAAGGAGTGAATTCCATCTTGTACTGTTATGTTCCCAGCCCCCATTCGATCTTGCCCCTGAAATGGTAAGATTATTGAGTCGGCGAACTGGCCACTCTCACCCATACAAATCTAAGGACAATCCCTCCTGAAAGGGGTTCATAACAGACTCAGGATTGAGATTGAGTTACCTAGGTCATCCTATTGAAATAAAAACCTAAACTAGTTAACGACGTTACATCTAGTGGTTACTATTTCGCGGTCCAATCTTATGCAAACTCATTGCATAGGATACCCCCACCCGCATGTCTCCTACATGGATGTTTTGGATCATTGCATCTGTATCGAATACAAGGTGGACCGTATCACATAGTGTCACCAGGATAAGGTACCCAGCCTTATCCCTATACTATAGACCTTTTAGGTTGTTACTTGGACACTGATCCCCGTATGTCCCCACATACTAGTCCAAGTTTCATTTAAATAACCTTGGATCTTAGTTTATTGGATTTAGGGTTTATTAATGCAAACTCGATTATTCAATAACCAAATTACTGAATTACTCAAATAACACTTTATTGAGATTGATTAATTTGTTTCATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACACCCACCGCATCAAAAGGCAAAGGAAAAGAAAAAGTGGGCGTAGGAGAAGAAACGGCGGGTGACAATTGGGGAAAATTTAAAGAAGAACGTGGATTTAGCTGCACCCTCCCGCAAGCAATGACCGAGCAGATCTCCCAACGCAAGTGGGAAACAGTTTGCGAGAACCCCCGCTTCTACGCCCCTGCGCTAGTGCATGACTTCTACCGGGTGCAGTGGCAAAAAGAAATTGACGAAGTACTGGTCTGAGGCCACTTTGTCGCATTCTCCTCCGCTTGCATCAACAAAGTCTACGAGCTGCGAGACATCCCAAACGCAGAAGGGAATGCGCTCCTCGACTGCCTCGATGATGATTTCCTAAGCGCAGTACTTCTTACGGTGGCCAGACCGGGAGCCAAGTGGGACGGCCACGACACTGCGAGGACCCTCAGATCTCAGCTGCTTGATTTTGAGGCCACCTGCTGGATGCATTGGGTAAAGAATCCAACGCATGATGCGACATTGAGCCTCCAACGGGTGATCCTGGTTGGTTTATTGCATTATGAAGGGCACCCCAATCGACTTGGGGCAGATCCTCGTCGAAACATTACGCCAGACCGCCGCAAAACCGAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACCGGCTTATGCCGCGCATCAGGCTTCGTGCCCGCAGCAAATGAAGAAATCCGACCCATGCAGAAGGATTTTGACGACCAGTGGTGGACGCGTGTAACCAGCACCCGTGATAAGTGTCTGCAAGGAAGCACGCAACAACCAGCCCCCGCATCCTAACCCTCCGAACCTGCGCCTACGCCCGAAGCACCAAAGAAAAAGAGGCGCAAGCAAACCGCAGGCAGAAACCCACCATGAGCCGCAAGGACCCCTCAAGCTCCTTCTCCAGCGCAGGAAAACACTGTCTGCGCCCAACCTAAGGGATCCTTGCCGCAATCGCAAGAAAGCTTGCCACCACGTCCTCTGCCACTACAACCACCAATTGTCCAGCACACATCTCCTCCGCAGCACAATGACGAATTGCGACCAGAGGAGATGTTTGAAGGTTCATTGCCGAGCCCGCCTCGCAATGAAGAGGTCCCCACACCGAGCCCTACACCGCAAGCCACAGCTTCTGCAAGTACAACTCAGGCTGGGACTGATCTACTGATTGATGTGGATTCAGCACTTGTCTTTTCAGAGCTGCGACGGATAATTCTAGAAAATGTGGAGCCACTGCGCCAGCAGCAAGAAAGGATGTGCTAG

mRNA sequence

ATGTCAGACTCACAAAATCCCTCTCTCGCCGGTTATGCTGACGATGCTCCTCCATCTTCGCCGGAGGTGGAAGGGCCGCATAGGGACATCATTATCTCATCGCATGAAGAACACGATAACCGGCAAGACGATGACCACATGGAGGAAGATGAAGCAGAGGTCATCGATGGGGAACAACCCATCGAAAGCTTGGAAACTCCACTCACCGCCGATCCATCATCCTCCGGAGCGAACACCACTGAAGTTCTTGACGTCACACCACTGGACACCTCAACCATCAACATACAGCCAGTAAACCTCCAACCCGCACAAAATATCCTCGGCCCACGTAACCTAACTCCATTTTCCTCTCCTTTCCCGTCCGTTTCCATTCTTCCACCTCCCAACTCTTCCACTGCCCTGGCCCCAAACACCACCCCTTCCTCTTCCTCCACCCCCGCGACCGTTTCCATGTCCCTCCCACCATCCACTTCCACAAATCCTACTCTCCCGCAGTTCTCTGAGCGGGAAGTCGCCGCATGGAACTCTCTGATGGGAGAACTGGGCGAGGAAGGCGAAGCAATTCTTCTGCGAGAAGAGCAAGAAAAGGCTGTCGCAGAGGAAAATGCACGCAAGGCCGCCGCAGATGACACAGCGGCCAAAGAAAAAGAGGGCTCCAGCAAGCACGTGGAAGATCCGGTTGTCGTAGAAATTGCCGCAACCAACATAGCAATCATTGCGACAGCTCTAGACGTTGAAGCCTCTAATTTCGAGGATGAGCTCCCCCTTACTCATCACCGCAACATCCAGTCCACGGGGGTAGTCATCCGCGAGCCCTCTGAAAGACCTGTGGTAGCCCCCAGCAAGAAAAGGAAAGCGCCCACTGAAGGATTGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCTGTGAACACCACCACTATGGCTACACCGATATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAACCCACAGCTGCACTCTTCTCACTGTAGAATATTTCAGTGTCCACGGATATCGACCAAGCAGCCACTTTGTCGCATTCTCCTCCGCTTGCATCAACAAAGTCTACGAGCTGCGAGACATCCCAAACGCAGAAGGGAATGCGCTCCTCGACTGCCTCGATGATGATTTCCTAAGCGCAGTACTTCTTACGGTGGCCAGACCGGGAGCCAAGTGGGACGGCCACGACACTGCGAGGACCCTCAGATCTCAGCTGCTTGATTTTGAGGCCACCTGCTGGATGCATTGGGGCACCCCAATCGACTTGGGGCAGATCCTCGTCGAAACATTACGCCAGACCGCCGCAAAACCGAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACCGGCTTATGCCGCGCATCAGGCTTCGTGCCCGCAGCAAATGAAGAAATCCGACCCATGCAGAAGGATTTTGACGACCAGTGGTGGACGCGTGTAACCAGCACCCGTGATAAGACCCCTCAAGCTCCTTCTCCAGCGCAGGAAAACACTGTCTGCGCCCAACCTAAGGGATCCTTGCCGCAATCGCAAGAAAGCTTGCCACCACGTCCTCTGCCACTACAACCACCAATTGTCCAGCACACATCTCCTCCGCAGCACAATGACGAATTGCGACCAGAGGAGATGTTTGAAGGTTCATTGCCGAGCCCGCCTCGCAATGAAGAGGTCCCCACACCGAGCCCTACACCGCAAGCCACAGCTTCTGCAAGTACAACTCAGGCTGGGACTGATCTACTGATTGATGTGGATTCAGCACTTGTCTTTTCAGAGCTGCGACGGATAATTCTAGAAAATGTGGAGCCACTGCGCCAGCAGCAAGAAAGGATGTGCTAG

Coding sequence (CDS)

ATGTCAGACTCACAAAATCCCTCTCTCGCCGGTTATGCTGACGATGCTCCTCCATCTTCGCCGGAGGTGGAAGGGCCGCATAGGGACATCATTATCTCATCGCATGAAGAACACGATAACCGGCAAGACGATGACCACATGGAGGAAGATGAAGCAGAGGTCATCGATGGGGAACAACCCATCGAAAGCTTGGAAACTCCACTCACCGCCGATCCATCATCCTCCGGAGCGAACACCACTGAAGTTCTTGACGTCACACCACTGGACACCTCAACCATCAACATACAGCCAGTAAACCTCCAACCCGCACAAAATATCCTCGGCCCACGTAACCTAACTCCATTTTCCTCTCCTTTCCCGTCCGTTTCCATTCTTCCACCTCCCAACTCTTCCACTGCCCTGGCCCCAAACACCACCCCTTCCTCTTCCTCCACCCCCGCGACCGTTTCCATGTCCCTCCCACCATCCACTTCCACAAATCCTACTCTCCCGCAGTTCTCTGAGCGGGAAGTCGCCGCATGGAACTCTCTGATGGGAGAACTGGGCGAGGAAGGCGAAGCAATTCTTCTGCGAGAAGAGCAAGAAAAGGCTGTCGCAGAGGAAAATGCACGCAAGGCCGCCGCAGATGACACAGCGGCCAAAGAAAAAGAGGGCTCCAGCAAGCACGTGGAAGATCCGGTTGTCGTAGAAATTGCCGCAACCAACATAGCAATCATTGCGACAGCTCTAGACGTTGAAGCCTCTAATTTCGAGGATGAGCTCCCCCTTACTCATCACCGCAACATCCAGTCCACGGGGGTAGTCATCCGCGAGCCCTCTGAAAGACCTGTGGTAGCCCCCAGCAAGAAAAGGAAAGCGCCCACTGAAGGATTGGAATTCCGTAATTCCGTAAAGCGGAAGCGTGATTGGGACCGATTCTGTGAACACCACCACTATGGCTACACCGATATGACTCTGAGACTTCTAGAGGCAGGAGACTGGTGGGAGTCTAGAGGAAGCCTTGAGGGGAATTCTCTGAGAACCCACAGCTGCACTCTTCTCACTGTAGAATATTTCAGTGTCCACGGATATCGACCAAGCAGCCACTTTGTCGCATTCTCCTCCGCTTGCATCAACAAAGTCTACGAGCTGCGAGACATCCCAAACGCAGAAGGGAATGCGCTCCTCGACTGCCTCGATGATGATTTCCTAAGCGCAGTACTTCTTACGGTGGCCAGACCGGGAGCCAAGTGGGACGGCCACGACACTGCGAGGACCCTCAGATCTCAGCTGCTTGATTTTGAGGCCACCTGCTGGATGCATTGGGGCACCCCAATCGACTTGGGGCAGATCCTCGTCGAAACATTACGCCAGACCGCCGCAAAACCGAAGGGCGCAATGTTTTGCCTAGGCCTTGTCACCGGCTTATGCCGCGCATCAGGCTTCGTGCCCGCAGCAAATGAAGAAATCCGACCCATGCAGAAGGATTTTGACGACCAGTGGTGGACGCGTGTAACCAGCACCCGTGATAAGACCCCTCAAGCTCCTTCTCCAGCGCAGGAAAACACTGTCTGCGCCCAACCTAAGGGATCCTTGCCGCAATCGCAAGAAAGCTTGCCACCACGTCCTCTGCCACTACAACCACCAATTGTCCAGCACACATCTCCTCCGCAGCACAATGACGAATTGCGACCAGAGGAGATGTTTGAAGGTTCATTGCCGAGCCCGCCTCGCAATGAAGAGGTCCCCACACCGAGCCCTACACCGCAAGCCACAGCTTCTGCAAGTACAACTCAGGCTGGGACTGATCTACTGATTGATGTGGATTCAGCACTTGTCTTTTCAGAGCTGCGACGGATAATTCTAGAAAATGTGGAGCCACTGCGCCAGCAGCAAGAAAGGATGTGCTAG

Protein sequence

MSDSQNPSLAGYADDAPPSSPEVEGPHRDIIISSHEEHDNRQDDDHMEEDEAEVIDGEQPIESLETPLTADPSSSGANTTEVLDVTPLDTSTINIQPVNLQPAQNILGPRNLTPFSSPFPSVSILPPPNSSTALAPNTTPSSSSTPATVSMSLPPSTSTNPTLPQFSEREVAAWNSLMGELGEEGEAILLREEQEKAVAEENARKAAADDTAAKEKEGSSKHVEDPVVVEIAATNIAIIATALDVEASNFEDELPLTHHRNIQSTGVVIREPSERPVVAPSKKRKAPTEGLEFRNSVKRKRDWDRFCEHHHYGYTDMTLRLLEAGDWWESRGSLEGNSLRTHSCTLLTVEYFSVHGYRPSSHFVAFSSACINKVYELRDIPNAEGNALLDCLDDDFLSAVLLTVARPGAKWDGHDTARTLRSQLLDFEATCWMHWGTPIDLGQILVETLRQTAAKPKGAMFCLGLVTGLCRASGFVPAANEEIRPMQKDFDDQWWTRVTSTRDKTPQAPSPAQENTVCAQPKGSLPQSQESLPPRPLPLQPPIVQHTSPPQHNDELRPEEMFEGSLPSPPRNEEVPTPSPTPQATASASTTQAGTDLLIDVDSALVFSELRRIILENVEPLRQQQERMC

Homology

The following BLAST results are available for this feature:

BLAST of Spg018818 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018818 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018818 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018818 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..591
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 531..545
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..42
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..530
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..163
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018818.1	Spg018818.1	mRNA