Spg018813 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg018813
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Locationscaffold3: 12956203 .. 12956964 (-)
RNA-Seq ExpressionSpg018813
SyntenySpg018813
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCCTCATCGGCGTCGAAGGTCGGGGCGGCGGCGACAACAAGGGAAAGAAAGGGTTAAGGAAGGGAAAGAAAGGAAATGGGTTTCGTCGGCGACGTCGGAGGTCGAGGGCGGTGGCGGCAATAAGAGAAAGGAGGGGGAAAGAAAGGGAATGGATTTTATCGGCGTCGGAGGTCAAGGGTGGCGGCGGCGACAAGGGAAATGAGGGGGAAAGAAGGAAAAGAAGGGAAAGAAGGAAAGAAACGAGGGTTTCGGGGGGGGTAGGGGAGAGAGGAGAGAGAGAGTATTTTGTAAAAATTATTATTTTTATTATTTATTATTATTTTAATTTTAAAATTAATATTTTATTTTTTATTAACTGCCACGTCAGCACCGTTAAAAAAATTAACGGTGGAGGGACTTAATAGAAGCATTTTTAAAACAGTAGGGACTTGATTGTTCGATTTTGAAACTTAAGGACCTATTGGAAACGAACCTCAAACACGAGGGACCAAAAAGGTATTTTACCCTTAATTATTTATTAAAATTGGAACATTTTTCCTATTAGGAAAATGTCTTCCTTTTCCTATTAGGAAAAAGGTCTTGGCCTTTACTATATATAGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTGGACTCCCACCAGTCTCCTGCCTCTAAAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGA

mRNA sequence

ATGGGTTTCCTCATCGGCGTCGAAGGTCGGGGCGGCGGCGACAACAAGGGAAAGAAAGGGTTAAGGAAGGGAAAGAAAGGAAATGGGTTTCGTCGGCGACGTCGGAGGTCGAGGGCGGTGGCGGCAATAAGAGAAAGGAGGGGGAAAGAAAGGGAATGGATTTTATCGGCGTCGGAGGTCAAGGGTGGCGGCGGCGACAAGGGAAATGAGGGGGAAAGAAGGAAAAGAAGGGAAAGAAGGAAAGAAACGAGGGTTTCGGGGGGGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTGGACTCCCACCAGTCTCCTGCCTCTAAAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGA

Coding sequence (CDS)

ATGGGTTTCCTCATCGGCGTCGAAGGTCGGGGCGGCGGCGACAACAAGGGAAAGAAAGGGTTAAGGAAGGGAAAGAAAGGAAATGGGTTTCGTCGGCGACGTCGGAGGTCGAGGGCGGTGGCGGCAATAAGAGAAAGGAGGGGGAAAGAAAGGGAATGGATTTTATCGGCGTCGGAGGTCAAGGGTGGCGGCGGCGACAAGGGAAATGAGGGGGAAAGAAGGAAAAGAAGGGAAAGAAGGAAAGAAACGAGGGTTTCGGGGGGGGACCCCTGGGGTGGGGTGAAAGGCATCCCATTCATTCTCCTACTCTCAGAGAATTCCCCTCAAGGCTTCCTCTGGACTCCCACCAGTCTCCTGCCTCTAAAAGTCTCAGAGTCATACCGGTGTAGCCATAGTGGTGGTGTTCGCACTAGTTCGTGA

Protein sequence

MGFLIGVEGRGGGDNKGKKGLRKGKKGNGFRRRRRRSRAVAAIRERRGKEREWILSASEVKGGGGDKGNEGERRKRRERRKETRVSGGDPWGGVKGIPFILLLSENSPQGFLWTPTSLLPLKVSESYRCSHSGGVRTSS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg018813.1Spg018813.1mRNA