Spg018702 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg018702
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationscaffold3: 11259949 .. 11265574 (+)
RNA-Seq ExpressionSpg018702
SyntenySpg018702
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAAAACAGAGGTGGCTCTTACTATTGAGTCGTTTCATCAGTGTTCTAGCTTAATTTCGATCAAGTTAAACACCACCAACTTCTTGTTATGGAGATCACAAGTATTGCCCTTGGTAAGGAGTCCTGGAGTTATACATCACTTAACTGAAGATAGTCCTCCAAAAGCAGAAATGATCAACAAAGAAGGTAAGGCAGAAACTAATCCGAACTTTCAGATTTGGCTTAATCATGGTCTTTAATCATGGTTTCTTTTTCAGTTATTACTTATAGCACCCTTCTGAAGGCATTTATCCGTGCAAAGAAGTTTGGTAAGGTGTGCTTACTATCCTCTGACCACTTTCATTTTTGGACTTGATACAAATCTTTACTTTTAATTTCGAACTAGCCATGCGTCCTTATTATACTTCTCTGTGAAACCTGTTGATACCTTCTAAGTTTAACCATACCTTGGCTAGGTCCCTGAAATATATAAAGAAATGGAAAGTGATGGTTGCACACCAGATAGGAAGGCTAGAGAGATGTTAAAGTCCGTAACAATGGTTCTTGAATAAAGGCATTGTAAGTTTCACCTTTTTTGTACTCTTATTTTTAACTCAGCTAGAGCTGTCCTTGCTTGTCATATAATTCTTCACCATTCTGCCACGAGGTAATGGTAAATTTAAAATGTTAAGTCATAATTTGAAAATTTGTATATTAAGGTCAACGAGACCCCATACTTAGTCATTCGGAGCACTAGATAACTTATTAAAGGCATATCAACACGTGTATATAGTAGCTACAAGATGTTATGGAAAACAGTAAAGGCAAGTATAAACAATATTAAACTTATTTTACACAATGTATGTAACATAAATTACTTGTTTGGGTATTGCACTGTCCTTTAGGAGTGGGAAACGTTGAATGTCGATATTATGTGATGAGATATATGAAAGATATCATGATTAAAAGAAGCACTTAATCACAGATTCGGTATGTTAACAATTTTGGTTTGAAATATATAGTCCAAATAGTGTAATGATAAAGTATTATTTATCATAGAAATAACATTTGACTCTCAATGTTAATTTATAGATTGATACAAGGAACTCATACTCGCAATTTGAGCTAGATGAAGTGCGAGTAGAGTGGACTGAATTTCTGGGTCGCAACATCTAATGGCAACTACTTTGAAATTGTTCATTTCAATTTTTTGGGTAGCTACATAGGTGCGCGATATACTTTTTTGTGTAAATGTTTGTTGTTTAAAGTGGAAATTGTAGGTTGACAAAAACTTTCTCATTTTGAAGATATGGTGGAAATAGGTAGTTTGTGATTTTGAATATATGGTGGAGATAGGTATTATGTAATTTTGTGGATATGGTGGAAATTGGAGTAAAGTTCTTCATTTTGGAATTGTCCAAATGGAAGTTGATAGGTCTTGTAATTTTTGGAATTGTTCATATGGGTTGATAATTGTAATTCTGGAATTGTTTATATGGAGGTTGTTCATTTTGTAATGTTGAAGATATTTAATTGATGTTATTGGAGGAAATTTGGTTGATGGGTATTGAATGTGTATTCTTTATTTGGTTGATCTTGGAATGCAAGGCTGTAAATTCAAGATAATAGGGAACAACCTATTATAATTGAAAAAAAACAACTACCAACAAACTTGACATGTAAAATGTGTCAACAACTTTTTAAATTGATATTTATGAAATGTCAAGATAAAATACCATTTGACATGTTAGAGCTGTCAAGTTTTAACAAATATGATATTTAATAACTGTCAAGAAATCTATATACATGACGCTTTATAAATGTCAAAAATTTAATATTCTTGACGTTTCAAATATATTAAGGAAAAGATGTCTTGACGCTTCTCGTTTGTCACATTTTTGATACTTTATTCTTGACAGTTGTTCTCTCAACGCTTTTAAAAGCGTCAAGAGTATTAACATTTGACATTCTAAAAACGTCAAGTAAGTCAATTTTTCTTGTAGTCACTCTTCGCCGTATGGAGGCCATTTCAGCGGACAGAGGACAGCTATGAGGATTTTGCATTGTGGATTCTTTTGGCCTTCCTTGTTTAAGGATGCCCATTGGTTCTACAAGCAATGTGATGCTTGCCAAAGGAGAGGAAACTTAGGGCCTAGAGATGAAATGCCTCTTACTTACATTTTGGAAGTTGAATTATTCGATGTATGGGGTATTGATTTTATGGGGTCATTTCCCCCTTCTAATGGTAATGTATTTATCCTATTGGCAGTTGATTACGTGTCCAAGTGGGTGGAGGCCATTGCATGCCATCAGAATGATGCCAAGACAGTAGCAAGGTTTCTTCAATCGCACATTTTTGCGCGGTTTGGGACACCTAGAGCTTTAGTAAGTGATGAGGGTACACATTTTGTTAATAATATCTTAACTAAGCTTTTAGCTAAGTATGAGATTAAGCATAGGATAGCTACCCCTTATCACCCACAAGCAAATGGTCAAGCTGAGATTAGTAATAGGGAAATAAAATCAATTCTAGAAAAAGTAGTTATCCATCTAGGAAGGATTGGTCTTTTAGGTTGGATGAGGCTCTTTGGGCTTATAGGACAGCCTATAAGACTCCTCTAGGTATGTCTCCCTATAGGTTAGTATATGGGAAAGCTTGTCATTTACCATTAGAGCTTGAGCATAAAACGTTTTGGGCTTTGGAAAAATTAAATTTTGATCTGAGTCGTGCAGGAGCAATTAGAATGTTGTAGCTTAACGAGTTGGAGGAATTTCGCCAATTTTCGTATTAAAATTCGAAAATGTATAAAGAAAAGACTAAGTTGTGGCATGATAGGAAAATTAAACCTAAAGAGTTTGTCAAGGGTCAAAGAGTTTTGCTTTATAATTCTAGATTGAAATTATTTCTCGGGAAACTAAAATCTAAATGGTCAGGGCCATTTATTGTGATTGAGGTTTTTCCCCATGGAGCAATTACTTTGCAGGATGAAAAAGATGGGAAAGTGTTCAAAGTGAATGGACAGCGTGTGAAACATTATTGGGGAGAGGAGTTCCAGACGAAATATCCTTCCCTAAAGTTGGTTGATGATTGAGAGCGCAAGATTTTTGCGGGAGCATTTCACAGAGCAATATTTTGAGCTCCCAGTGTTTGATTTTATTTCTCGCTGATACGATTTGATTTTAATTAGGTTAGATTTGGTTTGTTTAATTTTGCATGATATTTATTTTAAGCGTGTTGTTATTTTTAATTCCATAGGTTTTATTTTATTTTATTTTTGCTAAGTTATTTTATTTAATTAGTTCAGAATAGAGGTAGTTTAAGTTTATTTTCTGTTTAGATTAGATTTTTATTCCAGTTTTTATTTTCGGTTATTTAAATTTCTGTTTAGATTAGATTTGAATAAAGTTTCTCCTCATTTATTCGGTTTTGAATAATAAAAATAAAAAGATTTGATTTGAGCGGTTAATATTTGAATTTCCGGATTTGATTTTTTCTATTTTGGGTTTAAATTTTCCTTATCCAAGATTCTTAAGGTAATCTTTTCAGAAGGTTGTTGCGGCAAAGTTATGGCTGAAGCAAATCTTCAGTCTGAATAGGAAGTATTTTATTGTGAATTAATTATTTTTACCGTCTGATTTTGAATTTCTGTGGGGAGATAAATTGCATGGATGTTGCCACGTGTCGCGCAGGGATAATCCAACGGTTTAGCCGTTGACAGCACGCAGTTATTTACCATGGGCGATTGAAATTCAAAGTTTTTACCGTTAGTGGATTTGATTTGCAAATTAAATGTGAACGGTAAATCCATTTAATACAGGGCAAAATCTTTCGGTTACGATTTGATTTGCTGCAGCTCTATTTATTCCTACGCCTTCGGTAAGTTCTTCTCACTTCAATTTCTTGTTCATCCCTTGCCATTTGCATTTTTCTTTCTTTCTCTGTGTGCGATAGAAATTACTTTGAGTCTTCAATGCCCAAAACAAGAGCAAGAAAAAAGAGAGATAGTGAGGAAGAGGAGGTACCCGTTACCCCCGAAGCACCGAAAGTGAAGGCAAGAAGAAGAAGACACCAGAAGAAAAAAAAGCTAAAAGAAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAGTTGTAGAGAAGGTGGTGGAAGACGTTGCTGCCACGGTGGTTGAAGAAGACCTGAAAGAACAAGAAGAACAAGACCCAGAGCAGACTGGGCCAGGAGTTACGGATACAGAGGAAGTTCAAGAAGAAAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAGGTGCAGGAACATCATGCAGAGGTTGCACCTGAAGAAGGTAACGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCCAAACGTCGCCGCATTAAAAGAAAAGCAGGTCGCGTCAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAAAGAGAGGAACAACAGAAGAAAGAAGCCGAGGAAAAAGCAAGAGAGGAAGTAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAGAGTGTTGCTGAAGCATCGGAAGAACCTGATGAAATAGAAGAGTCACAGTTGCCGTATGAGCGCTTCGTCAACAATTTTGCCAGAGCAAAATATGCTGAGCTTCTGAAAAGAGATTTTTTGTTTGAGAGAGGATTTAGCGGTGATCTTCTGCATTTTCTAAGGACTGGTATTGCAGACCACGGTTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGGAATCGAAGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAAAATTTCCCCCACGCAGCGTATAATGAGATGGTTGTAGCGCCATCTAATGAGCAGCTAAGCGATGCTGTACGGGAAGTGGGTATTGAAGGGGCACAATGGCAGTTTCAAAAACTGAGAAGAGGACGTTTCAGTCAGCTTATCTGAAGAGGGAAGCGAACACATGGATGGGGTTTATCAGACAGAGGTTGCTTCCAATGACTCATGACTCGACAGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAAGATTATTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAGGTGGGGAAGCTATTTTTCCCGAATACCATTACCACGCTTTGCAAGAGAGCAGGGGTTCTAGAGAATGAAGGAGATGTGATTTTATTTGACAAGGGAATCATCGACACGCCTAACTTGGCACGGCTTTAGCGTATGCAAGAGGCACGTCAGGGTGAGCTTCTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCATCTGGAACTATGTTAAGAGTCGTGATGCCAATCTGAAGAAGGCACTGCAGGAGAATTTTTCCAAGCCGTATCCAGCCCTTCCAGCCTTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAGGGGATGATGAAAATGAGTAG

mRNA sequence

ATGGCCAAAACAGAGGTGGCTCTTACTATTGAGTCGTTTCATCAGTGTTCTAGCTTAATTTCGATCAAGTTAAACACCACCAACTTCTTGTTATGGAGATCACAAGTATTGCCCTTGGTAAGGAGTCCTGGAGTTATACATCACTTAACTGAAGATAGTCCTCCAAAAGCAGAAATGATCAACAAAGAAGTTATTACTTATAGCACCCTTCTGAAGGCATTTATCCGTGCAAAGAAGTTTGGTAAGCTCTATTTATTCCTACGCCTTCGCACCGAAAGTGAAGGCAAGAAGAAGAAGACACCAGAAGAAAAAAAAGCTAAAAGAAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAGTTGTAGAGAAGGTGGTGGAAGACGTTGCTGCCACGGTGGTTGAAGAAGACCTGAAAGAACAAGAAGAACAAGACCCAGAGCAGACTGGGCCAGGAGTTACGGATACAGAGGAAGTTCAAGAAGAAAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAGGTGCAGGAACATCATGCAGAGGTTGCACCTGAAGAAGGTAACGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCCAAACGTCGCCGCATTAAAAGAAAAGCAGGTCGCGTCAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAAAGAGAGGAACAACAGAAGAAAGAAGCCGAGGAAAAAGCAAGAGAGGAAGTAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAGAGTGTTGCTGAAGCATCGGAAGAACCTGATGAAATAGAAGAGTCACAGTTGCCGTATGAGCGCTTCGTCAACAATTTTGCCAGAGCAAAATATGCTGAGCTTCTGAAAAGAGATTTTTTGTTTGAGAGAGGATTTAGCGGTGATCTTCTGCATTTTCTAAGGACTGGTATTGCAGACCACGGTTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGGAATCGAAGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAAAATTTCCCCCACGCAGCGTATAATGAGATGGTTGTAGCGCCATCTAATGAGCAGCTAAGCGATGCTGTACGGGAAGTGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAAGATTATTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAGCGTATGCAAGAGGCACGTCAGGGTGAGCTTCTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCATCTGGAACTATGTTAAGAGTCGTGATGCCAATCTGAAGAAGGCACTGCAGGAGAATTTTTCCAAGCCGTATCCAGCCCTTCCAGCCTTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAGGGGATGATGAAAATGAGTAG

Coding sequence (CDS)

ATGGCCAAAACAGAGGTGGCTCTTACTATTGAGTCGTTTCATCAGTGTTCTAGCTTAATTTCGATCAAGTTAAACACCACCAACTTCTTGTTATGGAGATCACAAGTATTGCCCTTGGTAAGGAGTCCTGGAGTTATACATCACTTAACTGAAGATAGTCCTCCAAAAGCAGAAATGATCAACAAAGAAGTTATTACTTATAGCACCCTTCTGAAGGCATTTATCCGTGCAAAGAAGTTTGGTAAGCTCTATTTATTCCTACGCCTTCGCACCGAAAGTGAAGGCAAGAAGAAGAAGACACCAGAAGAAAAAAAAGCTAAAAGAAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAGTTGTAGAGAAGGTGGTGGAAGACGTTGCTGCCACGGTGGTTGAAGAAGACCTGAAAGAACAAGAAGAACAAGACCCAGAGCAGACTGGGCCAGGAGTTACGGATACAGAGGAAGTTCAAGAAGAAAACACTGAGGAGATTCAAGAAAAACAGGCTGAGGAGGTGCAGGAACATCATGCAGAGGTTGCACCTGAAGAAGGTAACGAGCAAGAACAGGAGGCTCGAGTGGAGGTGATCATGCCGGAGGTACCCAAACGTCGCCGCATTAAAAGAAAAGCAGGTCGCGTCAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACCACTGATTCTGAAAGAGAAAATGCAGAAAGAGAGGAACAACAGAAGAAAGAAGCCGAGGAAAAAGCAAGAGAGGAAGTAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCGGAAAAGGGCAAGAGTGTTGCTGAAGCATCGGAAGAACCTGATGAAATAGAAGAGTCACAGTTGCCGTATGAGCGCTTCGTCAACAATTTTGCCAGAGCAAAATATGCTGAGCTTCTGAAAAGAGATTTTTTGTTTGAGAGAGGATTTAGCGGTGATCTTCTGCATTTTCTAAGGACTGGTATTGCAGACCACGGTTGGGAGTTGTTTTGTGCAAAGCCTGAGTCTGTAAACGCACAGGTGGTGCGCGAATTTTATGCAAATATTGACAAGGAAGATGGTTTCCAAGTGATTGTTCGAGGAATCGAAGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAAAATTTCCCCCACGCAGCGTATAATGAGATGGTTGTAGCGCCATCTAATGAGCAGCTAAGCGATGCTGTACGGGAAGTGGTCTCTAGGGAACGGGTTCTTCTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGAAAGATTATTGTTAATGAGATATCTGGTTGTTGGAAGAAGAAGCGTATGCAAGAGGCACGTCAGGGTGAGCTTCTCTACGGCATCAACACGATTTTAGAACAACTCGCACTTTCGGCCAGCAGGCAGGAGTTTGCCGAGAGGCAAGCTTTAACCATCTGGAACTATGTTAAGAGTCGTGATGCCAATCTGAAGAAGGCACTGCAGGAGAATTTTTCCAAGCCGTATCCAGCCCTTCCAGCCTTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAGGGGATGATGAAAATGAGTAG

Protein sequence

MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMINKEVITYSTLLKAFIRAKKFGKLYLFLRLRTESEGKKKKTPEEKKAKRRRRQQRAEDQEVVEKVVEDVAATVVEEDLKEQEEQDPEQTGPGVTDTEEVQEENTEEIQEKQAEEVQEHHAEVAPEEGNEQEQEARVEVIMPEVPKRRRIKRKAGRVKVVRTDTPSPPTTDSERENAEREEQQKKEAEEKAREEVEKKAEEERLLKRRAEKGKSVAEASEEPDEIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPESVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALYNLQNFPHAAYNEMVVAPSNEQLSDAVREVVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKRMQEARQGELLYGINTILEQLALSASRQEFAERQALTIWNYVKSRDANLKKALQENFSKPYPALPAFPEDLLNPWIPPPPMERGGGDDENE
Homology
[Close]
BLAST of Spg018702 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 89.7 bits (221), Expect = 8.1e-14
Identity = 84/349 (24.07%), Postives = 132/349 (37.82%), Query Frame = 0 

Query: 282 EIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPE 341
           E E +   YE  + N  R   AE   + F+ +   +   L F+   I  H W+ FCA PE
Sbjct: 26  ETEAAATRYENNIQN--RPLNAE---KGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPE 85

Query: 342 SVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALYNLQNFPHAAYNEMVVAPSNE 401
                +VREFYAN+   +   V VRG++V WS  AINA++ L + P   ++E +   + +
Sbjct: 86  DPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQ 145

Query: 402 QLSDAVREV---------------------------------------------VSRERV 461
            L   +  V                                             VS++R+
Sbjct: 146 DLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRM 205

Query: 462 LLAFAILRSLSIDVGKIIVNEISGCWKKKR------------MQEAR------------- 518
           LL  ++L   SI+VG++I +EI  C  +K              + AR             
Sbjct: 206 LLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNT 265

[Close]
BLAST of Spg018702 vs. NCBI nr
Match: XP_024932970.1 (uncharacterized protein LOC112492813 [Ziziphus jujuba])

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-11
Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 0 

Query: 5  EVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEM-INKE 64
          E+ LTI+SFHQCSSLISIKL+ TNFLLWRSQ+ PLVRS G++HHL +D   + +   N+E
Sbjct: 24 ELTLTIQSFHQCSSLISIKLSMTNFLLWRSQIFPLVRSLGILHHLIDDGKTEEKTDHNEE 83

Query: 65 VITYSTLLKAFIR 77
           I+   LL  ++R
Sbjct: 84 WISNDDLLITWLR 96

[Close]
BLAST of Spg018702 vs. NCBI nr
Match: CAN74381.1 (hypothetical protein VITISV_007944 [Vitis vinifera])

HSP 1 Score: 80.1 bits (196), Expect = 6.4e-11
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 1  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMI 60
          MA  E  L+I++FHQCSSL+SIKLN +N LLWRSQVLPLVRS G+IHHL+E+     E +
Sbjct: 1  MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASXETM 60

Query: 61 NKE 64
            E
Sbjct: 61 GTE 63

[Close]
BLAST of Spg018702 vs. NCBI nr
Match: RVW77775.1 (Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera])

HSP 1 Score: 80.1 bits (196), Expect = 6.4e-11
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 1  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMI 60
          MA  E  L+I++FHQCSSL+SIKLN +N LLWRSQVLPLVRS G+IHHL+E+     E +
Sbjct: 1  MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHASEETM 60

Query: 61 NKE 64
            E
Sbjct: 61 GTE 63

[Close]
BLAST of Spg018702 vs. NCBI nr
Match: RVX11446.1 (hypothetical protein CK203_015972 [Vitis vinifera])

HSP 1 Score: 79.3 bits (194), Expect = 1.1e-10
Identity = 39/63 (61.90%), Postives = 48/63 (76.19%), Query Frame = 0 

Query: 1  MAKTEVALTIESFHQCSSLISIKLNTTNFLLWRSQVLPLVRSPGVIHHLTEDSPPKAEMI 60
          MA  E  L+I++FHQCSSL+SIKLN +N LLWRSQVLPLVRS G+IHHL+E+     E +
Sbjct: 1  MANPENVLSIQAFHQCSSLVSIKLNMSNLLLWRSQVLPLVRSLGLIHHLSENRHTLEETM 60

Query: 61 NKE 64
            E
Sbjct: 61 GTE 63

[Close]
BLAST of Spg018702 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.9e-14
Identity = 84/349 (24.07%), Postives = 132/349 (37.82%), Query Frame = 0 

Query: 282 EIEESQLPYERFVNNFARAKYAELLKRDFLFERGFSGDLLHFLRTGIADHGWELFCAKPE 341
           E E +   YE  + N  R   AE   + F+ +   +   L F+   I  H W+ FCA PE
Sbjct: 26  ETEAAATRYENNIQN--RPLNAE---KGFVLDNSETMGQLPFIAQVITQHNWKQFCAHPE 85

Query: 342 SVNAQVVREFYANIDKEDGFQVIVRGIEVDWSPSAINALYNLQNFPHAAYNEMVVAPSNE 401
                +VREFYAN+   +   V VRG++V WS  AINA++ L + P   ++E +   + +
Sbjct: 86  DPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQ 145

Query: 402 QLSDAVREV---------------------------------------------VSRERV 461
            L   +  V                                             VS++R+
Sbjct: 146 DLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRM 205

Query: 462 LLAFAILRSLSIDVGKIIVNEISGCWKKKR------------MQEAR------------- 518
           LL  ++L   SI+VG++I +EI  C  +K              + AR             
Sbjct: 206 LLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNT 265

The following BLAST results are available for this feature:
BLAST of Spg018702 vs. NCBI nr
Match NameE-valueIdentityDescription
PON46472.18.1e-1424.07hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
XP_024932970.11.7e-1157.53uncharacterized protein LOC112492813 [Ziziphus jujuba][more]
CAN74381.16.4e-1161.90hypothetical protein VITISV_007944 [Vitis vinifera][more]
RVW77775.16.4e-1161.90Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera][more]
RVX11446.11.1e-1061.90hypothetical protein CK203_015972 [Vitis vinifera][more]
BLAST of Spg018702 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Spg018702 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2P5BCG43.9e-1424.07Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
BLAST of Spg018702 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 228..270
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..285

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg018702.1Spg018702.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane