Spg018665 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAATCAGGTGCCACTAATTTACGGTGGATATCCAGCAATTGGTGAGATTGACAATAGCGGCCATGGATTGGATGCTTTGGTGGCCAATAACCCCACACTACTCTTCCTACGAATAAGTGGAGGCTTTTTATGTGTGAGGTACGTTTCACAATCCCTATTTACACTTAGATTTACACAAACCTGAATCTAACTTAAGTTTCAGAGGGTGTTGCAACACCCTACTAGTGTGCAGTTTTTTATGTTGGTAGGAATTAGTTAGTTCCTTCCTTGATTTGAGATAACACTAAATGGTAATTTGGTTGGGCTATTCTTGTCTGCCAAATTTAAGCATTAACATTTGGTGTTGTCTATAGGGATGAAACTATGTCCTACCTTGATTGGATACCAAAATCTAACATGCGCAAAGAAATGATGATATTGAAAGTGATGGAAGACCGTCGAAAGAAAAGTTGGTTTCTAGCTAGACACTTGACGATCTAGTTTCTTTAATACTGCTAGTTCATTTGGACGATATAATGGTTCTATGTGAATATCATAAGCACATACATCTTATTGATTTCATTAAATTAATATTTACAACTATTCATTAAAAATAATATGCTCTATTTGTACTTTATTTATCTCGTTTAAGAATCAAATCAAGACTTTGTTTCTCTTCTAAAAACAAAAAGAAAAAGAACCAAATCAAGACATCATTAATATTGCAATCCTGGGAGGAGAGATGTTCGCCTTTGGAGGTCTTCTCCCTCTGATGACTTTTATTGTAAATCCTTCTTTCTTTGCCTAGTCAACCCTTCTCCTTCTAGTGATGTCTTCGCCTTGTTGTAGAAAGTTAAAATTTCAAAGAAGGTTAAATTTTTTCTTGGGAGGTACTCCACAGAAGGTGAGAAAAAGAATAGGCTCTTGGAAAAAATGCTTATTCTCTAAAGGTGGAAGATTAACTCTTATTCGTTTGGTGCTAAGTGGGATCTCGATGTATTTTTTCTCGTTGTTAGAGTCACAAATGCGATATGTAGTCGTCTGGAGAAGATTATAAGAAATTTTCTATGGGAAGGGGTTGTTAAGTGGAGGGAAGTTCACCTTGTGAGTTGGAAGACGGTGGGAAAGCATGTGGGTCATGGCGGGCTAGAATTAGGGAATTTGAGACTGAGAAATAAAGCCCTACTAACTAAATGGTTGTGGCAATTCTTGCTTGAATCAACCTCTTTGTGGCACCAGATTATTGTGAGTAAGTATTGCTACCATCCCTATGAGTGGCTTTCCTTGAGGGGGGAGGGGGGAAGGGGGGTTAAAGGCTCCTTTTTTCACTGGTTGCTGAGGCCCCATCCCCCTGTAGTGAGTCTATCTTCTATATATATATATATATACGAGGAAGATGCCCTTGTTGGTTGGACCTTTTTGTTGTATCCTTTATCGGAGGTTGGAGGAAGATCTGGATCACATAATCTAGAATTGTACCTTTGCGTGTTTTGTTTGGATTTTGTTCTTTGAGGCCTCCAGGTTGCAGATCAAGAGCTTTAGAGACCACAGGGAGGTGATCGAGGAGTTCCTCCTCCATCCGCCGTTCAAAGATAAGGGGAGGATGTTATGGCTTGTTCGGGTGTGTGCTGTTTTTTGGGGTTTGTAGGGAGAGAGAAATAATAAGGTTTTTAGAGGATCGGTGAGGTCCCCTTAATATTGGTGTGTGCTGATGTGTGTGTGGATAGTATGTCGATGTGGTTGTCTGTTGTTTGGTTGCTCAATGGGTGTGAGCTACTTACCAGTACTGTGGTTGTACTGATACCCCTCCCCTTTCTTTCCCCCAACATTTTCAGATTATGCAGGTGTTGATGAGGTTTATGTGCCCAATGATGTAGATGAGGAGGTTCACGAAGAATGA ATGCAGAATCAGGTGCCACTAATTTACGGTGGATATCCAGCAATTGGTGAGATTGACAATAGCGGCCATGGATTGGATGCTTTGGTGGCCAATAACCCCACACTACTCTTCCTACGAATAAGTGGAGGCTTTTTATGTGTGAGGTGGAAGATTAACTCTTATTCGTTTGGTGCTAAGTGGGATCTCGATGTATTTTTTCTCGTTGTTAGAGTCACAAATGCGATATGTAGTCGTCTGGAGAAGATTATAAGAAATTTTCTATGGGAAGGGGTTGTTAAGTGGAGGGAAGTTCACCTTGTGAGTTGGAAGACGGTGGGAAAGCATGTGGGTCATGGCGGGCTAGAATTAGGGAATTTGAGACTGAGAAATAAAGCCCTACTAACTAAATGGTTGTGGCAATTCTTGCTTGAATCAACCTCTTTGTGGCACCAGATTATTGTGAGTAAGTATTGCTACCATCCCTATGAGTGGCTTTCCTTGAGGGGGGAGGGGGGAAGGGGGGTTAAAGGCTCCTTTTTTCACTGGTTGCAGATCAAGAGCTTTAGAGACCACAGGGAGGTGATCGAGGAGTTCCTCCTCCATCCGCCGTTCAAAGATAAGGGGAGGATGTTATGGCTTGTTCGGGTGTGTGCTGTTTTTTGGGATTATGCAGGTGTTGATGAGGTTTATGTGCCCAATGATGTAGATGAGGAGGTTCACGAAGAATGA ATGCAGAATCAGGTGCCACTAATTTACGGTGGATATCCAGCAATTGGTGAGATTGACAATAGCGGCCATGGATTGGATGCTTTGGTGGCCAATAACCCCACACTACTCTTCCTACGAATAAGTGGAGGCTTTTTATGTGTGAGGTGGAAGATTAACTCTTATTCGTTTGGTGCTAAGTGGGATCTCGATGTATTTTTTCTCGTTGTTAGAGTCACAAATGCGATATGTAGTCGTCTGGAGAAGATTATAAGAAATTTTCTATGGGAAGGGGTTGTTAAGTGGAGGGAAGTTCACCTTGTGAGTTGGAAGACGGTGGGAAAGCATGTGGGTCATGGCGGGCTAGAATTAGGGAATTTGAGACTGAGAAATAAAGCCCTACTAACTAAATGGTTGTGGCAATTCTTGCTTGAATCAACCTCTTTGTGGCACCAGATTATTGTGAGTAAGTATTGCTACCATCCCTATGAGTGGCTTTCCTTGAGGGGGGAGGGGGGAAGGGGGGTTAAAGGCTCCTTTTTTCACTGGTTGCAGATCAAGAGCTTTAGAGACCACAGGGAGGTGATCGAGGAGTTCCTCCTCCATCCGCCGTTCAAAGATAAGGGGAGGATGTTATGGCTTGTTCGGGTGTGTGCTGTTTTTTGGGATTATGCAGGTGTTGATGAGGTTTATGTGCCCAATGATGTAGATGAGGAGGTTCACGAAGAATGA MQNQVPLIYGGYPAIGEIDNSGHGLDALVANNPTLLFLRISGGFLCVRWKINSYSFGAKWDLDVFFLVVRVTNAICSRLEKIIRNFLWEGVVKWREVHLVSWKTVGKHVGHGGLELGNLRLRNKALLTKWLWQFLLESTSLWHQIIVSKYCYHPYEWLSLRGEGGRGVKGSFFHWLQIKSFRDHREVIEEFLLHPPFKDKGRMLWLVRVCAVFWDYAGVDEVYVPNDVDEEVHEE Homology
BLAST of Spg018665 vs. NCBI nr
Match: XP_022151711.1 (uncharacterized protein LOC111019624 [Momordica charantia]) HSP 1 Score: 106.3 bits (264), Expect = 3.7e-19 Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 0
BLAST of Spg018665 vs. NCBI nr
Match: TQD69489.1 (hypothetical protein C1H46_044978 [Malus baccata]) HSP 1 Score: 96.7 bits (239), Expect = 2.9e-16 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of Spg018665 vs. NCBI nr
Match: RVW15726.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 96.3 bits (238), Expect = 3.8e-16 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Spg018665 vs. NCBI nr
Match: CAN83427.1 (hypothetical protein VITISV_009103 [Vitis vinifera]) HSP 1 Score: 95.9 bits (237), Expect = 4.9e-16 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Spg018665 vs. NCBI nr
Match: KAA0032235.1 (peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 4.9e-16 Identity = 61/156 (39.10%), Postives = 81/156 (51.92%), Query Frame = 0
BLAST of Spg018665 vs. ExPASy TrEMBL
Match: A0A6J1DFI2 (uncharacterized protein LOC111019624 OS=Momordica charantia OX=3673 GN=LOC111019624 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.8e-19 Identity = 54/123 (43.90%), Postives = 73/123 (59.35%), Query Frame = 0
BLAST of Spg018665 vs. ExPASy TrEMBL
Match: A0A540K5H1 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_044978 PE=4 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.4e-16 Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0
BLAST of Spg018665 vs. ExPASy TrEMBL
Match: A0A438BXJ5 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDh000004_886 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.8e-16 Identity = 47/118 (39.83%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Spg018665 vs. ExPASy TrEMBL
Match: A0A5A7SSQ8 (Peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00550 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.4e-16 Identity = 61/156 (39.10%), Postives = 81/156 (51.92%), Query Frame = 0
BLAST of Spg018665 vs. ExPASy TrEMBL
Match: A5BN97 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_009103 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 2.4e-16 Identity = 49/118 (41.53%), Postives = 69/118 (58.47%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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