Spg018597 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018597
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	agamous-like MADS-box protein AGL62
Location	scaffold3: 10284557 .. 10285167 (-)
RNA-Seq Expression	Spg018597
Synteny	Spg018597

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAACCCTAAGCCGTCAGAAGTTTGAAATCAAGATGTTAGAGAAGAAGAGCAATGAAGAAGTCACATTTTTGAAGCGCCATGCAGGACTTTTCAAGAATGTTGTCGAGCTCTTTGTTTTGTTTGAAGTAGAGGTTGCCATCATCGTCTTGTCTCCCAACGGTAAGATGTTTTCCTTCGGTCATTCTGACGATGATCTGCTTCTGGATCGCTTCCTCACTGTAACTTTGTCGGCGTCGAATCCGGCTGAGAGATACGTCTTTGTGGCAGAGTTTAACTGCGATTTTTTGATTGAGCGGCGGAACTAGAAGCACAGAAGAAGCGAGCGATGAATTTGATAGAGGCGACAAGGCATTTCAAAAAGAACGATGGATTCTGGAGGAAACAGACGGTGGAAGGGATGAGATTGGAGTAATTCAGGGAGTTCCGATCAGCATTGATGTACTTAAGAGGCAAAGTGGTGAAGAGAGATGAGAAATTGATGACGGTCAGAATCATAGGGTTTGGTACCGCTGCTGCCTCCACCGTCGACGGCTTCGTGAACATCGTTTCAAGACGTCGAAAACCACCACCAGTGGGTGTCTTCGATGATGTTTCATCTTTCTAA

mRNA sequence

ATGAAGAAAACCCTAAGCCGTCAGAAGTTTGAAATCAAGATGTTAGAGAAGAAGAGCAATGAAGAAGTCACATTTTTGAAGCGCCATGCAGGACTTTTCAAGAATGTTGTCGAGCTCTTTGTTTTGTTTGAAGTAGAGGTTGCCATCATCGTCTTGTCTCCCAACGGTAAGATGTTTTCCTTCGGTCATTCTGACGATGATCTGCTTCTGGATCGCTTCCTCACTGTAACTTTGTCGGCGTCGAATCCGGCTGAGAGATACGTCTTTGTGGCAGAGGAGTTCCGATCAGCATTGATGTACTTAAGAGGCAAAGTGGTGAAGAGAGATGAGAAATTGATGACGGTCAGAATCATAGGGTTTGGTACCGCTGCTGCCTCCACCGTCGACGGCTTCGTGAACATCGTTTCAAGACGTCGAAAACCACCACCAGTGGGTGTCTTCGATGATGTTTCATCTTTCTAA

Coding sequence (CDS)

ATGAAGAAAACCCTAAGCCGTCAGAAGTTTGAAATCAAGATGTTAGAGAAGAAGAGCAATGAAGAAGTCACATTTTTGAAGCGCCATGCAGGACTTTTCAAGAATGTTGTCGAGCTCTTTGTTTTGTTTGAAGTAGAGGTTGCCATCATCGTCTTGTCTCCCAACGGTAAGATGTTTTCCTTCGGTCATTCTGACGATGATCTGCTTCTGGATCGCTTCCTCACTGTAACTTTGTCGGCGTCGAATCCGGCTGAGAGATACGTCTTTGTGGCAGAGGAGTTCCGATCAGCATTGATGTACTTAAGAGGCAAAGTGGTGAAGAGAGATGAGAAATTGATGACGGTCAGAATCATAGGGTTTGGTACCGCTGCTGCCTCCACCGTCGACGGCTTCGTGAACATCGTTTCAAGACGTCGAAAACCACCACCAGTGGGTGTCTTCGATGATGTTTCATCTTTCTAA

Protein sequence

MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFSFGHSDDDLLLDRFLTVTLSASNPAERYVFVAEEFRSALMYLRGKVVKRDEKLMTVRIIGFGTAAASTVDGFVNIVSRRRKPPPVGVFDDVSSF

Homology

[Close]

BLAST of Spg018597 vs. NCBI nr
Match: XP_022156144.1 (agamous-like MADS-box protein AGL62 [Momordica charantia])

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-22
Identity = 80/187 (42.78%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR  GLFK   EL VL  V++AI+V SPNGK+FS
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFS 60

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH + D+L DRFLT  L+   P ERYV V E                            
Sbjct: 61  FGHPNVDVLFDRFLTGNLAPPQPVERYVPVEELNREFADAERELEVQKRRAAEESRSSGG 120

Query: 121 ----------------EFRSALMYLRGKVVKRDEKLMTVRIIGFGTAAASTVDGFVNIVS 144
                           EFRSAL  LR KV +R EKL  VRI G  +   +T     ++  
Sbjct: 121 FWWEEPMEGMRLEELKEFRSALQDLRAKVEERVEKLTAVRIGGPLSPPPATP---FHLAG 180

[Close]

BLAST of Spg018597 vs. NCBI nr
Match: XP_004147877.3 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical protein Csa_002516 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 3.0e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE Y+ VAE                            
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

[Close]

BLAST of Spg018597 vs. NCBI nr
Match: XP_008466532.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 68

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE Y+ VAE                            
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128

[Close]

BLAST of Spg018597 vs. NCBI nr
Match: KAA0041553.1 (agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE Y+ VAE                            
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

[Close]

BLAST of Spg018597 vs. NCBI nr
Match: KAG7013413.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.8 bits (286), Expect = 6.7e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE YV VAE                            
Sbjct: 73  FGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132

[Close]

BLAST of Spg018597 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-13
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 1  MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
          +KKTL R+K EI  + K+SN +VTF KR AGLFK   E   L + ++A+IV SP GK+FS
Sbjct: 2  VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61 FGHSDDDLLLDRFLTVTLSASN 83
          FGH + D+LLD F    +  +N
Sbjct: 62 FGHPNVDVLLDHFRGCVVGHNN 83

[Close]

BLAST of Spg018597 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1  MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
          +KK+  RQK E+  ++ +SN +VTF KR +GLFK   EL  L   EVAI+V SP  K+FS
Sbjct: 2  VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61 FGHSDDDLLLDRFL 75
          FGH + D ++DRF+
Sbjct: 62 FGHPNVDSVIDRFI 75

[Close]

BLAST of Spg018597 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-10
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 2  KKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFSF 61
          +K L R+K E+  +  +SN +VTF KR +GLFK   EL  L + E+AIIV SP+GK +SF
Sbjct: 3  RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62 GHSDDDLLLDRFLTVTLSASN 83
          GH + + LLD  L   +  +N
Sbjct: 63 GHPNVNKLLDHSLGRVIRHNN 83

[Close]

BLAST of Spg018597 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.7e-10
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 2   KKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFSF 61
           K+++ RQK  +  ++K+S+ +VTF KR AGLFK   EL  L   E+ IIV SP  K FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHSDDDLLLDRFLT---VTLSASNPAERYVFVAEEFRSALMYLRGKVVKRDEK 112
           GH   + +LDR+++   ++L+ S   +     + E    L ++  +V +  +K
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKK 171

[Close]

BLAST of Spg018597 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-08
Identity = 40/122 (32.79%), Postives = 64/122 (52.46%), Query Frame = 0


Query: 7   RQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFSFGHSDD 66
           R K ++K +E  ++ +VTF KR  GL K   EL VL + EV++I+ SP GK++ F  S+ 
Sbjct: 3   RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNM 62

Query: 67  DLLLDRFLTVTLSASNPAERYVFVAEEFRSALMYLRGKVVKRDEKLMTV--RIIGFGTAA 126
              +DR+L  T    +       V+EE    L Y    ++K+ E+L     +++G G   
Sbjct: 63  QDTIDRYLRHTKDRVSTKP----VSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 120

[Close]

BLAST of Spg018597 vs. ExPASy TrEMBL
Match: A0A6J1DSH0 (agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC111023101 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 8.5e-23
Identity = 80/187 (42.78%), Postives = 96/187 (51.34%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR  GLFK   EL VL  V++AI+V SPNGK+FS
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRTGLFKKAAELSVLCGVDIAIVVFSPNGKVFS 60

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH + D+L DRFLT  L+   P ERYV V E                            
Sbjct: 61  FGHPNVDVLFDRFLTGNLAPPQPVERYVPVEELNREFADAERELEVQKRRAAEESRSSGG 120

Query: 121 ----------------EFRSALMYLRGKVVKRDEKLMTVRIIGFGTAAASTVDGFVNIVS 144
                           EFRSAL  LR KV +R EKL  VRI G  +   +T     ++  
Sbjct: 121 FWWEEPMEGMRLEELKEFRSALQDLRAKVEERVEKLTAVRIGGPLSPPPATP---FHLAG 180

[Close]

BLAST of Spg018597 vs. ExPASy TrEMBL
Match: A0A0A0LE01 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.5e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE Y+ VAE                            
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAED 128

[Close]

BLAST of Spg018597 vs. ExPASy TrEMBL
Match: A0A5D3D807 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G001020 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 60

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE Y+ VAE                            
Sbjct: 61  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 120

[Close]

BLAST of Spg018597 vs. ExPASy TrEMBL
Match: A0A1S3CRI8 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.9e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 68

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE Y+ VAE                            
Sbjct: 69  FGHPDVDVLLDRYLTGNLSPPKPAESYIPVAEFNRDFADFALEFEAEKKRAAELIRAAED 128

[Close]

BLAST of Spg018597 vs. ExPASy TrEMBL
Match: A0A6J1H4M6 (agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC111460353 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 3.2e-22
Identity = 79/169 (46.75%), Postives = 88/169 (52.07%), Query Frame = 0


Query: 1   MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
           MKKTL RQK EIK LEKKS+++VTF KR AGLFK   EL VL   EVAIIV SPN K+F 
Sbjct: 13  MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKVFC 72

Query: 61  FGHSDDDLLLDRFLTVTLSASNPAERYVFVAE---------------------------- 120
           FGH D D+LLDR+LT  LS   PAE YV VAE                            
Sbjct: 73  FGHPDVDVLLDRYLTGNLSPPKPAESYVPVAEFNRDFADLVLEFEAEKKRAEELIQASEE 132

[Close]

BLAST of Spg018597 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 1  MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
          +KKTL R+K EI  + K+SN +VTF KR AGLFK   E   L + ++A+IV SP GK+FS
Sbjct: 2  VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61 FGHSDDDLLLDRFLTVTLSASN 83
          FGH + D+LLD F    +  +N
Sbjct: 62 FGHPNVDVLLDHFRGCVVGHNN 83

[Close]

BLAST of Spg018597 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 0


Query: 1  MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
          +KK+  RQK E+  ++ +SN +VTF KR +GLFK   EL  L   EVAI+V SP  K+FS
Sbjct: 2  VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61 FGHSDDDLLLDRFL 75
          FGH + D ++DRF+
Sbjct: 62 FGHPNVDSVIDRFI 75

[Close]

BLAST of Spg018597 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 67.8 bits (164), Expect = 8.7e-12
Identity = 37/81 (45.68%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 2  KKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFSF 61
          +K L R+K E+  +  +SN +VTF KR +GLFK   EL  L + E+AIIV SP+GK +SF
Sbjct: 3  RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62 GHSDDDLLLDRFLTVTLSASN 83
          GH + + LLD  L   +  +N
Sbjct: 63 GHPNVNKLLDHSLGRVIRHNN 83

[Close]

BLAST of Spg018597 vs. TAIR 10
Match: AT4G36590.1 (MADS-box transcription factor family protein )

HSP 1 Score: 67.4 bits (163), Expect = 1.1e-11
Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 0


Query: 1  MKKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFS 60
          ++ T  RQK E+K +E +SN +VTF KR  GLFK   EL  L   E+ +IV SP GK+FS
Sbjct: 2  VRSTKGRQKIEMKKMENESNLQVTFSKRRFGLFKKASELCTLSGAEILLIVFSPGGKVFS 61

Query: 61 FGHSDDDLLLDRF 74
          FGH     L+ RF
Sbjct: 62 FGHPSVQELIHRF 74

[Close]

BLAST of Spg018597 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 65.9 bits (159), Expect = 3.3e-11
Identity = 40/113 (35.40%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 2   KKTLSRQKFEIKMLEKKSNEEVTFLKRHAGLFKNVVELFVLFEVEVAIIVLSPNGKMFSF 61
           K+++ RQK  +  ++K+S+ +VTF KR AGLFK   EL  L   E+ IIV SP  K FSF
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHSDDDLLLDRFLT---VTLSASNPAERYVFVAEEFRSALMYLRGKVVKRDEK 112
           GH   + +LDR+++   ++L+ S   +     + E    L ++  +V +  +K
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKK 171

The following BLAST results are available for this feature:

BLAST of Spg018597 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156144.1	1.8e-22	42.78	agamous-like MADS-box protein AGL62 [Momordica charantia]	[more]
XP_004147877.3	3.0e-22	46.75	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN59988.1 hypothetical p...	[more]
XP_008466532.1	3.9e-22	46.75	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
KAA0041553.1	3.9e-22	46.75	agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa] >TYK19701.1 agamo...	[more]
KAG7013413.1	6.7e-22	46.75	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Spg018597 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80807	2.6e-13	50.00	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
Q9FKK2	1.5e-11	50.00	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q9LMM8	1.2e-10	45.68	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
Q4PSU4	4.7e-10	35.40	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
O64645	2.0e-08	32.79	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]

BLAST of Spg018597 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DSH0	8.5e-23	42.78	agamous-like MADS-box protein AGL62 OS=Momordica charantia OX=3673 GN=LOC1110231...	[more]
A0A0A0LE01	1.5e-22	46.75	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE...	[more]
A0A5D3D807	1.9e-22	46.75	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CRI8	1.9e-22	46.75	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103503920 PE=4...	[more]
A0A6J1H4M6	3.2e-22	46.75	agamous-like MADS-box protein AGL62 OS=Cucurbita moschata OX=3662 GN=LOC11146035...	[more]

BLAST of Spg018597 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65360.1	1.9e-14	50.00	AGAMOUS-like 23	[more]
AT5G60440.1	1.0e-12	50.00	AGAMOUS-like 62	[more]
AT1G01530.1	8.7e-12	45.68	AGAMOUS-like 28	[more]
AT4G36590.1	1.1e-11	49.32	MADS-box transcription factor family protein	[more]
AT2G24840.1	3.3e-11	35.40	AGAMOUS-like 61	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 7..27 score: 43.94 coord: 42..63 score: 35.74 coord: 27..42 score: 54.6
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 1.3E-14 score: 64.5
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 16..61 e-value: 1.4E-15 score: 56.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 19.735729
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 17..85 e-value: 4.3E-16 score: 60.5
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 6..77
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..111
None	No IPR available	PANTHER	PTHR11945:SF618	AGAMOUS-LIKE MADS-BOX PROTEIN AGL61	coord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018597.1	Spg018597.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity