Spg018594 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018594
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 20390873 .. 20392282 (-)
RNA-Seq Expression	Spg018594
Synteny	Spg018594

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAACACTCAAGGATCGTCATTATCACGCAAAAACACTCAATCTCAGAGTGCACGATCAACCCACGAAGCTGAAGCAAGTAACCGACGGCAAGAAGAGAACCCCGAAACACCCATGCAAGGCACACGAAGAACGAGACCCACGGGATTCTCGTCGGCGGTCGTGAACCAAGCGCCCAACGCTCCAACTCCATCATCTTCGACAATGTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTACACCAAGAAGGTTCACGTGCGCCACTGCCGTCCATCAAACCCAAAAGCCCGCCGTTCAATAGTTTAGAAAACGTTCGCGGGAGTGGTTTGCAATGATCCAGGAGATGGGAGCCAAGAGACATGCTGCCCTTGAAGAAGAAGGAAGTAGGAAAGATGAAGAAAAAGCCGCCAAGGCAGCCGAAAGCTCTCGGCAAGAAGGAGTTGTAATGGGTTAGCATTCTGAACCTTCATCTAACCCTACTTTGTCTTGCAGGACCAAACCGTTTGTAACTTACAGCGCAAGAAAGAAGAGTCCGAAGAAGGTCGAGTCTGAAAAGCAGCTTGAGATTAAGCCCTTCACAAACCGCAAGAATTCCTTCCGACGTATTCTAAGGAATAATTCGCCAGGCAGTGGCAAAGGCTCTTGCGATTGCTAAGGGATACAAGGCTGAACAGGATGCTTTGAAAGAGGTTGAAGCCGAGAGGGAGATGGAAAAATAGAAAATGGCTGAGGAAGATGAGTTTGCAAGGGAAAGAGATGAGGAAGAAGAGAAAAGAAGAAGAGAAGAAGAACAAAAGGCCGAGAGGGCCTTAGAAGCTGAGTATGAGGAAAACCTCAGGAGGGCGCCATGGATTTGCAACTTCTTGAGGAAGAGAAAAAGAGATGGGAAGAAATAAAAGAAAATGAAAAGAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTGTAAGGGAGGGTAGAAGAAAAGGCCCAACAGGGGCCAACTGAAGAAAATTTAGAAAAAGAAAAAGAAAGAGAAGTAAAGAATGAAGGCCAGAATGCGACCGCATCTGGGCTGCATTCTGAGGAAGGCCTAGCCGAGGCCAATAAAGAGCAGCCAGTTGAAGAGGTTTTTGAGCCTATATACACGAATGACCCACCAACTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGTCAAAGAAGAAAAAGAAGACAAGGAGGCCGAGACCTCCAGTGATTCTGATTCTGAAACAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGACCAAGTCCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCCGAGAGGAGGACAAAGAACAAGAATGACCCGATATTTGCTTAG

mRNA sequence

ATGAAGAACACTCAAGGATCGTCATTATCACGCAAAAACACTCAATCTCAGAGTGCACGATCAACCCACGAAGCTGAAGCAAGTAACCGACGGCAAGAAGAGAACCCCGAAACACCCATGCAAGGCACACGAAGAACGAGACCCACGGGATTCTCGTCGGCGGTCGTGAACCAAGCGCCCAACGCTCCAACTCCATCATCTTCGACAATGTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTACACCAAGAAGGAGATGGGAGCCAAGAGACATGCTGCCCTTGAAGAAGAAGGAAGTAGGAAAGATGAAGAAAAAGCCGCCAAGGCAGCCGAAAGCTCTCGGCAAGAAGGAGTTGACCAAACCGTTTGTAACTTACAGCGCAAGAAAGAAGAGTCCGAAGAAGGCAGTGGCAAAGGCTCTTGCGATTGCTAAGGGATACAAGGCTGAACAGGATGCTTTGAAAGAGGAGGGCGCCATGGATTTGCAACTTCTTGAGGAAGAGAAAAAGAGATGGGAAGAAATAAAAGAAAATGAAAAGAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTAGAAGTAAAGAATGAAGGCCAGAATGCGACCGCATCTGGGCTGCATTCTGAGGAAGGCCTAGCCGAGGCCAATAAAGAGCAGCCAGTTGAAGAGGTTTTTGAGCCTATATACACGAATGACCCACCAACTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGTCAAAGAAGAAAAAGAAGACAAGGAGGCCGAGACCTCCAGTGATTCTGATTCTGAAACAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGACCAAGTCCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCCGAGAGGAGGACAAAGAACAAGAATGACCCGATATTTGCTTAG

Coding sequence (CDS)

ATGAAGAACACTCAAGGATCGTCATTATCACGCAAAAACACTCAATCTCAGAGTGCACGATCAACCCACGAAGCTGAAGCAAGTAACCGACGGCAAGAAGAGAACCCCGAAACACCCATGCAAGGCACACGAAGAACGAGACCCACGGGATTCTCGTCGGCGGTCGTGAACCAAGCGCCCAACGCTCCAACTCCATCATCTTCGACAATGTCGGCCACGTCGAGGGAGATGCCGAGTTCGTCTACACCAAGAAGGAGATGGGAGCCAAGAGACATGCTGCCCTTGAAGAAGAAGGAAGTAGGAAAGATGAAGAAAAAGCCGCCAAGGCAGCCGAAAGCTCTCGGCAAGAAGGAGTTGACCAAACCGTTTGTAACTTACAGCGCAAGAAAGAAGAGTCCGAAGAAGGCAGTGGCAAAGGCTCTTGCGATTGCTAAGGGATACAAGGCTGAACAGGATGCTTTGAAAGAGGAGGGCGCCATGGATTTGCAACTTCTTGAGGAAGAGAAAAAGAGATGGGAAGAAATAAAAGAAAATGAAAAGAGAAGGAAGGAAGCTGAAGACTTCCTTGCAGCCTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAAGCACTAGAAGTAAAGAATGAAGGCCAGAATGCGACCGCATCTGGGCTGCATTCTGAGGAAGGCCTAGCCGAGGCCAATAAAGAGCAGCCAGTTGAAGAGGTTTTTGAGCCTATATACACGAATGACCCACCAACTGCTGATAGCACCTCTTCGGGAGAGAAGAGGGTCAAAGAAGAAAAAGAAGACAAGGAGGCCGAGACCTCCAGTGATTCTGATTCTGAAACAGAATCTGATTCAGAGATTAGGGAGCTAGATGGCGACCAAGTCCCTATCTCTGCAGCATTGAGAAGAAAGAGGAAGAGAGAGATAAAGGCCGAGAGGAGGACAAAGAACAAGAATGACCCGATATTTGCTTAG

Protein sequence

MKNTQGSSLSRKNTQSQSARSTHEAEASNRRQEENPETPMQGTRRTRPTGFSSAVVNQAPNAPTPSSSTMSATSREMPSSSTPRRRWEPRDMLPLKKKEVGKMKKKPPRQPKALGKKELTKPFVTYSARKKSPKKAVAKALAIAKGYKAEQDALKEEGAMDLQLLEEEKKRWEEIKENEKRRKEAEDFLAAFEPLHKAQSEAEALEVKNEGQNATASGLHSEEGLAEANKEQPVEEVFEPIYTNDPPTADSTSSGEKRVKEEKEDKEAETSSDSDSETESDSEIRELDGDQVPISAALRRKRKREIKAERRTKNKNDPIFA

Homology

The following BLAST results are available for this feature:

BLAST of Spg018594 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018594 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018594 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018594 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 195..215
None	No IPR available	COILS	Coil	Coil	coord: 155..182
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 81..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018594.1	Spg018594.1	mRNA