Spg018539 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018539
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold3: 19648610 .. 19651471 (-)
RNA-Seq Expression	Spg018539
Synteny	Spg018539

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAGACAAAGAATCAAACCATATTGGGGGAAAGGCTTCGAGGATGAGGAAGCCCATGATTCCGTGATTGACCTGGTATGACTTCTATACTTTGAGAATTTATCTTTGAATATTATGGATCTATAATACATACAAATAAAATAATAATACAGATGGGAACTCCAAAATATCTGGACAAGAGTAAAAACTTAGTCTAGGAAAATCCTGTCTAGGAAAAGGTACTTAAGTTGACCGTAGGGAACACCTTTTCCTGGGGATTTACCTGGGAGTTTGAAAAGTCCATATTATTTTGTATCCTATCTATTTTTTAAAAAAAAAAAAGAAGAGAGAGAAGAGAAAATTGTAACTTTGAAGTCAAGAATAAAGGATTTTGATCAAAAGGGAACTTTGTCTAAGGAAAGCCTTGGCTAGGCTGAGGTATTTAAAGCTGACCGTAGGGAACACCTCTACCTGGGGGCTTACTTGGAAGTTGAATTGATTAAAAACTTTTTGACTTAATTTCTCTTAAAAAAGTAAAAATAAATCATGATTGAGCATGTGAACTTTCTAACATGTTTATGAGTGTTTCAGTAAAGAAGGAAAAGCAAAGGAAAATGAAGAGTCAAGGAAAAAAAGTGAAGGCAGAAAAACTGGGGACAATGCGATCGCATTTCTCCCCAGTGTATTTGGAGATACGACCGCATTTTAAAAAATAAGAGGGCAGTCACGAAATTTTTCGACCATCACGTGACCTAATTAGAAAACTATAAATAGCTGACCTTTTCTTTCCCTCTTCACCAAACACTAAGACTTTCGGTATTCAAGTCAAAACTCAAGAACTCTCCATATTCTCTCATCTTGAAACCGAAACCCACATCAAAGAACCATGAAGAACAATCCGAAATCACCATCATCACGCAAGATCACTCGATCTCAGAGTGCTCAAACCGTCCACGAAGCTTAAGCAAGCGCTCGACATCAAGAGAACCAACCCGAAACACCCATGCATGGCACGAGAAGAACGAGACCTTCAGGTTTCTCACCAGCTATCGTGAACCAAGAACCTGACGCTTAGACTCCTTCTTCCTCGACAATGCCGGCCACCTCGAGGGAGAATCCGAGTTCGTCTCAATCTAGGAGGTCCACGCGCGCCAATGTCGTCCACAAAACCCAAAAACCCACAACTCAACAATTCAGAAAACGCTCGCGGGAGTGATTTTCAATGATCTGGGTGATGGGAGCTCACAGACGTGCTGCTCTTGAAGAAGAAGAGAATAGGCAAGATGAAGAAGAAGCCGCCAAGGCAGCAGGAAGCTCTCGGCATAGGGAGGCTTCGACGGGTAAAACTTCTGAACCTTCAACTAACCCCTCTTAGTCTTGCAGGAATAAACCATTCGTTACCTACAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCTGAAAAGCCGCTTGTAATCGAGCCCCTTAAAACTGCGAGAATGCCTCCAGACGTGTTTGAGGACATAATCCACCAAGCTGTGGCAAAGGCTCTCGTGATTGTTGAAGGCTACAAGGCTAAACAAGAAGCCTTGAGGGAGATTGAGGCCGAGAGGGAGAAGGAAAATCAACACATGAGGGAAGAGGATGACTTTGCGAGAGAAAGAGAGCTTGAAGATGAAAAGAAGAAAGAAGAGGAAAGACAAGAGGCCGAGAGGGCCGAGTTAGCTGAAGAAGAGGAAAGAAAGTTAGGTGAAAACCTCAGGAGGGCAGCAGTTGAATTGAAACTCCTTGAGGAAGAAAAACAAAGAAGGGAAGAGTTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCCGCCGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAGTGAGGCTGAGATGCTGCAAGGGAGAGAAGAAAAGGCCCAACAGGGGCCAACTGAAGAAAATTTAGAAAAAGATAAAAGAAAGAGAAACAGAAGAAGAAGTTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGATGAAGGCCAGGATGAGGCCACTCAAGCACAGCCAGCTGATGAGCTTCTCGAACCTCTATTCAAAAATGACCCACCAGCAGCTGATAACACCTCTTCGGGAGAGAAGAGGGATGAAGAAAAGAAAGAAAGCAAGGAGGCCGAGACCTCTAGTGACTCTGAAATAGAATCCGATTCAAAGATCAAGGAGCTGGATGACGACCAAATTCCTATCTCTGCGGCATTAAGGAGAAAAAGAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAAAACAAGAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCAGCAGCTCCTCCTACTGTCTCTCCCGCCAAGTCAAAAGCCAAATCACCCAAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGTATTCAGAGATGTTAATTTTTTAGGAACGGATGGAGATAATGAGAAAAAGAGATTTCCTCAACGAGAAGGGATTCTCTAACAGAGTAGGAGTACTGCCAGAGTTCATAAGCAGAGTTATCTCCCATTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGCGCCTTTAGTTCGAGAGTTTTACGCTTGCCTGAGGAAGGAAAGCATCAATATGGCGGTAGTGAGAGGCAAAATGGTTAGCTTCTCTTCAGTAGACATCAACAAGGTGTACAGAATCAAGGCATCCCTACATCCAAGAGGGAATGATGTTATCAGGAACTCCTCGGCCAAGCAAATGAAAGAGGCATTAAAACTCGTGGCCAACACGGGAGTTCAATGGAAAGAGTCCCAAACGAAGGTGAAGAATTCAGTGCCCAACGATCTAAAGCCAGAATCAGTAGTATGA

mRNA sequence

ATGAAAAGACAAAGAATCAAACCATATTGGGGGAAAGGCTTCGAGGATGAGGAAGCCCATGATTCCGTGATTGACCTGTCAAAACTCAAGAACTCTCCATATTCTCTCATCTTGAAACCGAAACCCACATCAAAGAACCATGAAGAACAATCCGAAATCACCATCATCACGCAAGATCACTCGATCTCAGAGTGCTCAAACCGTCCACGAAGCTTAAGCAAGCGCTCGACATCAAGAGAACCAACCCGAAACACCCATGCATGGCACGAGAAGAACGAGACCTTCAGGAATAAACCATTCGTTACCTACAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCTGAAAAGCCGCTTGTAATCGAGCCCCTTAAAACTGCGAGAATGCCTCCAGACGTGTTTGAGGACATAATCCACCAAGCTGTGGCAAAGGCTCTCGTGATTGTTGAAGGCTACAAGGCTAAACAAGAAGCCTTGAGGGAGATTGAGGCCGAGAGGGAGAAGGAAAATCAACACATGAGGGAAGAGGATGACTTTGCGAGAGAAAGAGAGCTTGAAGATGAAAAGAAGAAAGAAGAGGAAAGACAAGAGGCCGAGAGGGCCGAGTTAGCTGAAGAAGAGGAAAGAAAGTTAGGTGAAAACCTCAGGAGGGCAGCAGTTGAATTGAAACTCCTTGAGGAAGAAAAACAAAGAAGGGAAGAGTTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCCGCCGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAAAAGAGAAACAGAAGAAGAAGTTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGATGAAGGCCAGGATGAGGCCACTCAAGCACAGCCAGCTGATGAGCTTCTCGAACCTCTATTCAAAAATGACCCACCAGCAGCTGATAACACCTCTTCGGGAGAGAAGAGGGATGAAGAAAAGAAAGAAAGCAAGGAGGCCGAGACCTCTAGTGACTCTGAAATAGAATCCGATTCAAAGATCAAGGAGCTGGATGACGACCAAATTCCTATCTCTGCGGCATTAAGGAGAAAAAGAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAAAACAAGAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCAGCAGCTCCTCCTACTGTCTCTCCCGCCAAGTCAAAAGCCAAATCACCCAAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGCGCCTTTAGTTCGAGAGTTTTACGCTTGCCTGAGGAAGGAAAGCATCAATATGGCGGTAGTGAGAGGCAAAATGGTTAGCTTCTCTTCAGTAGACATCAACAAGGTGTACAGAATCAAGGCATCCCTACATCCAAGAGGGAATGATGTTATCAGGAACTCCTCGGCCAAGCAAATGAAAGAGGCATTAAAACTCGTGGCCAACACGGGAGTTCAATGGAAAGAGTCCCAAACGAAGGTGAAGAATTCAGTGCCCAACGATCTAAAGCCAGAATCAGTAGTATGA

Coding sequence (CDS)

ATGAAAAGACAAAGAATCAAACCATATTGGGGGAAAGGCTTCGAGGATGAGGAAGCCCATGATTCCGTGATTGACCTGTCAAAACTCAAGAACTCTCCATATTCTCTCATCTTGAAACCGAAACCCACATCAAAGAACCATGAAGAACAATCCGAAATCACCATCATCACGCAAGATCACTCGATCTCAGAGTGCTCAAACCGTCCACGAAGCTTAAGCAAGCGCTCGACATCAAGAGAACCAACCCGAAACACCCATGCATGGCACGAGAAGAACGAGACCTTCAGGAATAAACCATTCGTTACCTACAGTGCAAGGAAGAGGAGTCCCAAGAAAGTTGTGCCTGAAAAGCCGCTTGTAATCGAGCCCCTTAAAACTGCGAGAATGCCTCCAGACGTGTTTGAGGACATAATCCACCAAGCTGTGGCAAAGGCTCTCGTGATTGTTGAAGGCTACAAGGCTAAACAAGAAGCCTTGAGGGAGATTGAGGCCGAGAGGGAGAAGGAAAATCAACACATGAGGGAAGAGGATGACTTTGCGAGAGAAAGAGAGCTTGAAGATGAAAAGAAGAAAGAAGAGGAAAGACAAGAGGCCGAGAGGGCCGAGTTAGCTGAAGAAGAGGAAAGAAAGTTAGGTGAAAACCTCAGGAGGGCAGCAGTTGAATTGAAACTCCTTGAGGAAGAAAAACAAAGAAGGGAAGAGTTAAAAGAAGATGAGAAAAGAAGAAAGGAAGCCGCCGAAGACTTCCTTGCAGCTTTTGAGCCACTCCACAAGGCTCAAAAAAGAGAAACAGAAGAAGAAGTTGAAGCCCAGAATGCGACCGCATCTGGGCCGCATTCTGATGAAGGCCAGGATGAGGCCACTCAAGCACAGCCAGCTGATGAGCTTCTCGAACCTCTATTCAAAAATGACCCACCAGCAGCTGATAACACCTCTTCGGGAGAGAAGAGGGATGAAGAAAAGAAAGAAAGCAAGGAGGCCGAGACCTCTAGTGACTCTGAAATAGAATCCGATTCAAAGATCAAGGAGCTGGATGACGACCAAATTCCTATCTCTGCGGCATTAAGGAGAAAAAGAAGAAGAGAGATTAAAGCTGAAAGGAGGACCAAAAACAAGAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGGTCCATGGACGCCTCTCCAGCAGCTCCTCCTACTGTCTCTCCCGCCAAGTCAAAAGCCAAATCACCCAAGGCTGCATCTCCTAAAAATCCATTCCCCGAGGAGTTCTGTGCTCACCCTCAGGAGGTCGTGGCGCCTTTAGTTCGAGAGTTTTACGCTTGCCTGAGGAAGGAAAGCATCAATATGGCGGTAGTGAGAGGCAAAATGGTTAGCTTCTCTTCAGTAGACATCAACAAGGTGTACAGAATCAAGGCATCCCTACATCCAAGAGGGAATGATGTTATCAGGAACTCCTCGGCCAAGCAAATGAAAGAGGCATTAAAACTCGTGGCCAACACGGGAGTTCAATGGAAAGAGTCCCAAACGAAGGTGAAGAATTCAGTGCCCAACGATCTAAAGCCAGAATCAGTAGTATGA

Protein sequence

MKRQRIKPYWGKGFEDEEAHDSVIDLSKLKNSPYSLILKPKPTSKNHEEQSEITIITQDHSISECSNRPRSLSKRSTSREPTRNTHAWHEKNETFRNKPFVTYSARKRSPKKVVPEKPLVIEPLKTARMPPDVFEDIIHQAVAKALVIVEGYKAKQEALREIEAEREKENQHMREEDDFARERELEDEKKKEEERQEAERAELAEEEERKLGENLRRAAVELKLLEEEKQRREELKEDEKRRKEAAEDFLAAFEPLHKAQKRETEEEVEAQNATASGPHSDEGQDEATQAQPADELLEPLFKNDPPAADNTSSGEKRDEEKKESKEAETSSDSEIESDSKIKELDDDQIPISAALRRKRRREIKAERRTKNKNDPIFAKRPRTRSMDASPAAPPTVSPAKSKAKSPKAASPKNPFPEEFCAHPQEVVAPLVREFYACLRKESINMAVVRGKMVSFSSVDINKVYRIKASLHPRGNDVIRNSSAKQMKEALKLVANTGVQWKESQTKVKNSVPNDLKPESVV

Homology

The following BLAST results are available for this feature:

BLAST of Spg018539 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018539 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018539 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018539 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 152..175
None	No IPR available	COILS	Coil	Coil	coord: 181..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 270..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 311..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018539.1	Spg018539.1	mRNA