Spg018456 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAACCACCGACGACAGCACGATTTCAGTGGATAGAGTAATGCTACTCTATTGCCTTATGGAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTTAGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAGTAGAACAGCATCCAGAGGAAAGACAAAGCCTCGACATCTCAGGCTACTCCTCAATCAGGGCCGAATGTAGCTTCACCATCTTAACACACTCCTTTTACAGGGCCTTCACCATCATCAAGAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAGACATATTGGGCGTATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTATCTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGAAGAAAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG ATGCCAACCACCGACGACAGCACGATTTCAGTGGATAGAGTAATGCTACTCTATTGCCTTATGGAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTTAGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGGCCTTCACCATCATCAAGAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAGACATATTGGGCGTATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTATCTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGAAGAAAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG ATGCCAACCACCGACGACAGCACGATTTCAGTGGATAGAGTAATGCTACTCTATTGCCTTATGGAGGGGTTGGAGATCAACGTAGGGAGCATTATCAGGGATGAGATTTTAGCCTGTGGGAGAAAAAGAGCAGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTCTGCCAAAGGGTGAAGATCGTTCCGGGCAAGGACGAGGAGCGGCCTTCACCATCATCAAGAGCCCTAGCCATTGCCTACCGCCAGCTAGATCAAATCAGGGAGAACCTGAAGACATATTGGGCGTATGCAAAGGAGCGGGATGAAGCCATTAGAGAGTTTTATCTCTCTATCGCCCCAAGTATTGCTCCGGTCTTTCCCAATTTCCCTCAGTCGCTGCTGCCTCAAGAAGACAAGGATTCTGATGAAGAGGAAGAAGAAAATGATGATGAAGATGATGAAGAGAAAGAGAGTTCCTCGAACGAGGACTAG MPTTDDSTISVDRVMLLYCLMEGLEINVGSIIRDEILACGRKRAGKLFFGSLITQLCQRVKIVPGKDEERPSPSSRALAIAYRQLDQIRENLKTYWAYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPQEDKDSDEEEEENDDEDDEEKESSSNED Homology
BLAST of Spg018456 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10 Identity = 61/201 (30.35%), Postives = 87/201 (43.28%), Query Frame = 0
BLAST of Spg018456 vs. NCBI nr
Match: KAF4375842.1 (hypothetical protein G4B88_026421 [Cannabis sativa]) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-10 Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 0
BLAST of Spg018456 vs. NCBI nr
Match: PON59596.1 (hypothetical protein PanWU01x14_158080 [Parasponia andersonii]) HSP 1 Score: 74.7 bits (182), Expect = 7.9e-10 Identity = 64/206 (31.07%), Postives = 91/206 (44.17%), Query Frame = 0
BLAST of Spg018456 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii]) HSP 1 Score: 74.7 bits (182), Expect = 7.9e-10 Identity = 59/193 (30.57%), Postives = 89/193 (46.11%), Query Frame = 0
BLAST of Spg018456 vs. NCBI nr
Match: XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]) HSP 1 Score: 69.3 bits (168), Expect = 3.3e-08 Identity = 34/89 (38.20%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of Spg018456 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.9e-11 Identity = 61/201 (30.35%), Postives = 87/201 (43.28%), Query Frame = 0
BLAST of Spg018456 vs. ExPASy TrEMBL
Match: A0A7J6FZ22 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_026421 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.9e-11 Identity = 43/131 (32.82%), Postives = 68/131 (51.91%), Query Frame = 0
BLAST of Spg018456 vs. ExPASy TrEMBL
Match: A0A2P5CEY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_158080 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.8e-10 Identity = 64/206 (31.07%), Postives = 91/206 (44.17%), Query Frame = 0
BLAST of Spg018456 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 3.8e-10 Identity = 59/193 (30.57%), Postives = 89/193 (46.11%), Query Frame = 0
BLAST of Spg018456 vs. ExPASy TrEMBL
Match: A0A803Q715 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.2e-09 Identity = 34/73 (46.58%), Postives = 49/73 (67.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|