Spg018372 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018372
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ribonuclease H
Location	scaffold3: 8312707 .. 8316049 (+)
RNA-Seq Expression	Spg018372
Synteny	Spg018372

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGTAATTTGTCCATGATACTTCGTATCTTGGATAAACCAGGTTCTAGCACTAAAACCCATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACAGTGTAGAATCAGGGACGAGATTAAAGGGAAATAAAACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAGACCTACAGATCGTACAATTCTGAGGAGCCCAGAACCAAGCACACTCAAGGTACATGACCACACAGTTTCAACACCAAGTTACAGCCATACCGGGACAGACCTAGGGAATCTGATCGAGGGGAAGCGCAGAAATGCCAAGGCTGCCGAGGCCGAGGCCAGGGCTGCTAAAGCTGAAGCCAGGGCTGTCGAGGTCGAGGCTAGATTGGCCAAGGCCGAGGCCAAAAAGGACAATCTCCCTAGGAAGACCGAGCTTCTGGACACGCAAAAAGAACTCGGAAATCCACAGGGAGACCTGCAGAAGTCAAAGGACCCAGGAGCTCGAGACTTGGAAGAACTGATCGACCAAGTTGACCCACCCTTCACAGAAGAAGTCATGAAAGCCGAGGTGCCTCAAAAGTTCAAGGTACCTACACTCACACTGTATGATGGCAAGAAAGACCCTGTGCAGCATCTGAATGCCTACAAAAGCTGGATGGACTTCCACGGCGTCTCAGATGCAATCAGGTGTCGCACATTCTTTTTCACTCTAAAAGGATCAACCAAGCACTGGTTTGAAAGGTTGAAAAGGAGATCAATCAGCTCTTTCAAGGAATTAGCCCGAGCATTCCTTGCACAGTTCATGGTAGCCAGAGAATAGCGCAAGCCTCACATCAACCTCTTAACAGTCAAACAACAGCCTGGTGAGAGCTTGCGTGATTATATAACACGTTTTAATGACGAAGCACTACAATTTGAGGGGTACAGCGAGGGAGCAGCCCTAGTAGCCATAACAGCCGGATTGGAAGACGAAAGACTGCTCAATTCAATAGGTAAGAGCCAACCTCGAACCTATGCAGAGTTTGTCTCTCGGGCATAGAAATACATGAGCGTAGAGGAGTTACTGAAGTCAAAGAGGTCAGAATTAGAGCACAAAAGACATTTTTCATCTGACCACGACAATAAAAAGGACAAGAGGAAGCGAACAGAAGAAAGAGGTCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATACGAAATACAAACCTGCTCAACGTGCCTAGAAAGTTGAAGTCAAATCCTGATAACAGAGACAAAAGCCAGTATTGTATCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAACTAAAGGACGAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAAACCAGAGATGGTCGAGGCCGACCAGAGATGACCCAAGCAAAGATGATGGTGGACCTCCTCTAGTAATCCATTGAGGACCAGGAATGACTCTCCTATGGTCGAGGCCGAGGCTGAGCCCTACCACACCTCATGCCAAGGTCAAGGACGAAATTCTAGAGAACACACTAAGGCTTAGTTTAGGGAATTCTAGTTTTTTTTTTTTCTTTATTGTGCATTTATCATGTAATCAGAGCACTGTCGCTCATTTTACTTTTGGTAGGTAGGAGTAGACTTTTCCCTTTTGCTTTACCATTAAATGAAAAGATTATCATTAATGTTAGGACCTAGATGTTCCCTTGTCAAGGCTTAGAGTGTGTTGTAAGGAATGTATGAAGACGACATGCGAGCCTAAGCTTTTCTGCTTAGTGCCCATGCTTACATGCGAGCCTATAGAGCCCACACTTACATGCGAGCCTATAGAGCCCATGCCCACATGCGAGCCTAAACTACTCAGTTTAGTGCCCACGCCTACATGCGAGCCTATAAAGCCCATGCCTATATGCGAGCCTAAGTTTTTTAGCTTAGTGCCCACGCTCAACATGCGAGTCTAGACTTTTCAGCCTAGTGCCCACGCTTCTCATGTGAGCCTAAGTTGTTTACTGCTTAGTGCCCACGCCTACATGCGAGCCTAGGCTTCCACGCTTAGAGCCCACACTAATGCGCACAAGCCTGGACTACCAAGTCTACCTTACCCCATCTGGCTTAAAGCCCATACATTTCATCTGTGACAAGCTCACCTGGCTGAACAGGCCGAGGCCGACCAGGCGAGGGCCGACCAGGCTGAGGCCGACCCCAAAACCTTGAAGGTATTATTCTCTTATTTCAACTATACTTTATCCTCTACTTGAGATTGGGGGCTACAAAGGGGATATGCAATCCCTATTAAACAAAAAGCAAGTAACAGGGGATATGCACTCCCGATTAAACAAAAGGCACACAAGCTTAGCATGTCCAACCAATGATTGCATGTTCTATCTTATTCTCTTATTTTCCTACAAGGACGAATATATGAATGCAGGGAGCTAAAATTTAGGCTAACAGGGGCCTGAGCCCGAGGCCGACCCTAGCCTCTGCTTGCCTCTTCCCTAACTTTTCTCTCGCAGAAATTAACTTTTCGATGCAGGAGCTCAAAATCTTCAAATCATATGTATGGATATGACTTGAGCCTGGAATGAAGCACTCCGAATAACCTATTACAAGAATGGTATGCTCAGCCTCATCCCAAGGCCGAGGCCGAGGCTGGGGCAATCACACAGGCCCTCCGGCCATTTCTGTAATCTCTCACCTTTCTCATTTCCATTTCACCTAACCCCTATTCAGGGAGTTTATACTTTGTCCAGTTTGTCCTATCTTGCAGGATAACAAGGAATCCATACATAAGTCGGCATGGAACGAGAGTTATACTCTTAAATCGGGCTTAAGGAGCTCAACTGATAGCACTAAGTCGCACCTGATTCCCAATTCAAGAGTGGAGGATTAATGTTATGGGTAATTTTGGACCACCATGATGTACAAGGAGCTGACAAGGACAACCGGGCGGAGATAGGACCAGGAAACGACCCAGAGGAAGACCAGACCAACGGGCCGGGCCAAGTTGGCCCGACCCATATGGTCGGCTCGGCCCAAGGTCGAGGCCGACCACTCGACCCGCTTGCGCTGGCCGAGTTCGTTTGCCTCCGCTCGGTCCCTAATGCCTCTAGCCGCCCCAGTTTCGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGGATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACACGAACTCTCGACTCTCTCCTCTTACTCTCTTCCTCTCCTCTTCCCGCTTTCTGA

mRNA sequence

ATGGATCGTAATTTGTCCATGATACTTCGTATCTTGGATAAACCAGGTTCTAGCACTAAAACCCATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACAGTGTAGAATCAGGGACGAGATTAAAGGGAAATAAAACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAGACCTACAGATCGTACAATTCTGAGGAGCCCAGAACCAAGCACACTCAAGGTACATGACCACACAGTTTCAACACCAAGTTACAGCCATACCGGGACAGACCTAGGGAATCTGATCGAGGGGAAGCGCAGAAATGCCAAGGCTGCCGAGGCCGAGGCCAGGGCTGCTAAAGCTGAAGCCAGGGCTGTCGAGGTCGAGGCTAGATTGGCCAAGGCCGAGGCCAAAAAGGACAATCTCCCTAGGAAGACCGAGCTTCTGGACACGCAAAAAGAACTCGGAAATCCACAGGGAGACCTGCAGAAGTCAAAGGACCCAGGAGCTCGAGACTTGGAAGAACTGATCGACCAAGTTGACCCACCCTTCACAGAAGAAAAATACATGAGCGTAGAGGAGTTACTGAAGTCAAAGAGGTCAGAATTAGAGCACAAAAGACATTTTTCATCTGACCACGACAATAAAAAGGACAAGAGGAAGCGAACAGAAGAAAGAGGTCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATACGAAATACAAACCTGCTCAACGTGCCTAGAAAGTTGAAGTCAAATCCTGATAACAGAGACAAAAGCCAGTATTGTATCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAACTAAAGGACGAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAAACCAGAGATGGTCGAGGCCGACCAGAGATGACCCAAGCAAAGATGATGGTGGACCTCCTCTAGCCGAGGCCGACCAGGCGAGGGCCGACCAGGCTGAGGCCGACCCCAAAACCTTGAAGAGTGGAGGATTAATGTTATGGGTAATTTTGGACCACCATGATGTACAAGGAGCTGACAAGGACAACCGGGCGGAGATAGGACCAGGAAACGACCCAGAGGAAGACCAGACCAACGGGCCGGGCCAAGTTGGCCCGACCCATATGGTCGGCTCGGCCCAAGGTCGAGGCCGACCACTCGACCCGCTTGCGCTGGCCGAGTTCGTTTGCCTCCGCTCGGTCCCTAATGCCTCTAGCCGCCCCAGTTTCGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGGATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACACGAACTCTCGACTCTCTCCTCTTACTCTCTTCCTCTCCTCTTCCCGCTTTCTGA

Coding sequence (CDS)

ATGGATCGTAATTTGTCCATGATACTTCGTATCTTGGATAAACCAGGTTCTAGCACTAAAACCCATGATGAGAGGTTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCATGGAGCACAGTGTAGAATCAGGGACGAGATTAAAGGGAAATAAAACTGACAGCATGACCAGCAAGGTCAGGGGGCTCAGACCTACAGATCGTACAATTCTGAGGAGCCCAGAACCAAGCACACTCAAGGTACATGACCACACAGTTTCAACACCAAGTTACAGCCATACCGGGACAGACCTAGGGAATCTGATCGAGGGGAAGCGCAGAAATGCCAAGGCTGCCGAGGCCGAGGCCAGGGCTGCTAAAGCTGAAGCCAGGGCTGTCGAGGTCGAGGCTAGATTGGCCAAGGCCGAGGCCAAAAAGGACAATCTCCCTAGGAAGACCGAGCTTCTGGACACGCAAAAAGAACTCGGAAATCCACAGGGAGACCTGCAGAAGTCAAAGGACCCAGGAGCTCGAGACTTGGAAGAACTGATCGACCAAGTTGACCCACCCTTCACAGAAGAAAAATACATGAGCGTAGAGGAGTTACTGAAGTCAAAGAGGTCAGAATTAGAGCACAAAAGACATTTTTCATCTGACCACGACAATAAAAAGGACAAGAGGAAGCGAACAGAAGAAAGAGGTCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAGTACACCCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATACGAAATACAAACCTGCTCAACGTGCCTAGAAAGTTGAAGTCAAATCCTGATAACAGAGACAAAAGCCAGTATTGTATCTTCCATCGAGATCATGGACATTCAACTAGGAACTGCATTCAACTAAAGGACGAAATTGAAGCGCTGATTCGGAACGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAAACCAGAGATGGTCGAGGCCGACCAGAGATGACCCAAGCAAAGATGATGGTGGACCTCCTCTAGCCGAGGCCGACCAGGCGAGGGCCGACCAGGCTGAGGCCGACCCCAAAACCTTGAAGAGTGGAGGATTAATGTTATGGGTAATTTTGGACCACCATGATGTACAAGGAGCTGACAAGGACAACCGGGCGGAGATAGGACCAGGAAACGACCCAGAGGAAGACCAGACCAACGGGCCGGGCCAAGTTGGCCCGACCCATATGGTCGGCTCGGCCCAAGGTCGAGGCCGACCACTCGACCCGCTTGCGCTGGCCGAGTTCGTTTGCCTCCGCTCGGTCCCTAATGCCTCTAGCCGCCCCAGTTTCGCCTGGTTCGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGGATGAGCAGGTATTTATACCCCTCTTCGCCACTGAAGAAGGGGACACGAACTCTCGACTCTCTCCTCTTACTCTCTTCCTCTCCTCTTCCCGCTTTCTGA

Protein sequence

MDRNLSMILRILDKPGSSTKTHDERLVRDPRKGKEPMEHSVESGTRLKGNKTDSMTSKVRGLRPTDRTILRSPEPSTLKVHDHTVSTPSYSHTGTDLGNLIEGKRRNAKAAEAEARAAKAEARAVEVEARLAKAEAKKDNLPRKTELLDTQKELGNPQGDLQKSKDPGARDLEELIDQVDPPFTEEKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEANQRWSRPTRDDPSKDDGGPPLAEADQARADQAEADPKTLKSGGLMLWVILDHHDVQGADKDNRAEIGPGNDPEEDQTNGPGQVGPTHMVGSAQGRGRPLDPLALAEFVCLRSVPNASSRPSFAWFVPKRLRIPKNPRRMSRYLYPSSPLKKGTRTLDSLLLLSSSPLPAF

Homology

[Close]

BLAST of Spg018372 vs. NCBI nr
Match: XP_022158830.1 (uncharacterized protein LOC111025293 [Momordica charantia])

HSP 1 Score: 110.5 bits (275), Expect = 4.0e-20
Identity = 72/173 (41.62%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPT 245
           ++YMS  E   SKR E + KR      +   DK + +    R R  Q D  +KFEKYTPT
Sbjct: 345 QRYMSAGEFFYSKR-EPDGKR-TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 404

Query: 246 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALI 305
           ++P EQ+LMEI++  LL  P ++K++   R K +YC+FHRDHGH+T++C  LK+E+E LI
Sbjct: 405 TVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLI 464

Query: 306 RNGYLKEFTTKAEANQRWSRPTRDDPSKD----DGGPPLAEADQAR-ADQAEA 354
           R GYLKE+  + +A Q  +  +   P+++     GGP   E+ + R AD  EA
Sbjct: 465 RRGYLKEYVEEPKATQ--NGESDKSPAREIRTIMGGPIERESGRKRKADVREA 513

[Close]

BLAST of Spg018372 vs. NCBI nr
Match: XP_022159192.1 (uncharacterized protein LOC111025612 [Momordica charantia])

HSP 1 Score: 109.8 bits (273), Expect = 6.9e-20
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKR-HFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTP 245
           +KYMS EE    K+ ELE KR     +   +K    + E++ R    Q D  +KFEKYTP
Sbjct: 29  QKYMSAEEFFHLKK-ELEGKRADQKRERSGEKPLSSKWEKQDR-VVGQKDLPRKFEKYTP 88

Query: 246 TSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEAL 305
           T++P EQ+LMEI++  LL  P  +K+ P+ R K +YC+FHRDHGH+T +C  LK+E+E L
Sbjct: 89  TTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGL 148

Query: 306 IRNGYLKEFTTKAEANQRWSRPTRDDPSKDD--------GGPPLAEADQAR 348
           IR GYLKE+    +A      P R++ +K          GG    E+D+ R
Sbjct: 149 IRKGYLKEYVDDLKAT-----PNRENDNKSPTREIRTIMGGSTEQESDRKR 192

[Close]

BLAST of Spg018372 vs. NCBI nr
Match: XP_022142767.1 (uncharacterized protein LOC111012805 [Momordica charantia])

HSP 1 Score: 105.1 bits (261), Expect = 1.7e-18
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPT 245
           ++YMS  E   SKR     +     +    K +  R E+R R    Q D  +KFEKYT T
Sbjct: 170 QRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRS--CQKDPPQKFEKYTST 229

Query: 246 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALI 305
           ++P EQ+LMEI+N  LL  P ++ ++   R K +YC+FH DHGH+T++C  LK+E+E LI
Sbjct: 230 TVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLI 289

Query: 306 RNGYLKEFTTKAEANQ 322
             GYLKE+  + +A Q
Sbjct: 290 LRGYLKEYVEEPKATQ 303

[Close]

BLAST of Spg018372 vs. NCBI nr
Match: XP_024042801.1 (uncharacterized protein LOC112099618 [Citrus clementina])

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-18
Identity = 63/170 (37.06%), Postives = 97/170 (57.06%), Query Frame = 0


Query: 164 SKDPGARDLEELIDQVDPPFTEEKYMSVEELLKSKRS------ELEHKRHFSSDHDNKKD 223
           +K+P AR   EL+ +       +KY +V+EL  +KR        +  KR    +    K+
Sbjct: 136 AKNP-ARTFTELLSRA------QKYSNVDELTNAKRGANSDSPRVAEKRKIKEEQIKNKE 195

Query: 224 KRKRTEERGRGRPDQGDYLKKFEKYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDK 283
           K  R E++G           +F +YTP ++P+EQ+LM+IRN +LL  P+ +K  P+ RD+
Sbjct: 196 KTSRLEKKG-----PKILQSRFPRYTPLNLPEEQVLMQIRNLDLLRKPKDIKIAPNRRDR 255

Query: 284 SQYCIFHRDHGHSTRNCIQLKDEIEALIRNGYLKEFTTKAEANQRWSRPT 328
           S+YC +HRDH H+  +C  LK+EI++LI+ GYLKEF  K     R   P+
Sbjct: 256 SKYCRYHRDHRHNIEDCFDLKEEIKSLIQRGYLKEFVRKDGGRIRDEEPS 293

[Close]

BLAST of Spg018372 vs. NCBI nr
Match: XP_022159368.1 (uncharacterized protein LOC111025785 [Momordica charantia])

HSP 1 Score: 103.2 bits (256), Expect = 6.4e-18
Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPT 245
           ++YMS  E   SKR E + KR      +   DK + +    R R  Q D  +KFEKYTPT
Sbjct: 129 QRYMSAGEFFYSKR-EPDGKR-TDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 188

Query: 246 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALI 305
           ++P EQ+LMEI++  LL  P ++K     R K +YC+FHRDH H+T++   LK+E+E LI
Sbjct: 189 TVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLI 248

Query: 306 RNGYLKEFTTKAEANQRWSRPTRDDPSKD----DGGPPLAE-ADQARADQAEADP 356
           R GYL+E+  + +A Q  +  +   P+++     GGP   E A + +AD  EA P
Sbjct: 249 RRGYLQEYVEEPKATQ--NGESEKSPAREIRTIMGGPIERESARKRKADVREARP 299

[Close]

BLAST of Spg018372 vs. ExPASy TrEMBL
Match: A0A6J1DWY0 (uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025293 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.0e-20
Identity = 72/173 (41.62%), Postives = 105/173 (60.69%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPT 245
           ++YMS  E   SKR E + KR      +   DK + +    R R  Q D  +KFEKYTPT
Sbjct: 345 QRYMSAGEFFYSKR-EPDGKR-TDPKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 404

Query: 246 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALI 305
           ++P EQ+LMEI++  LL  P ++K++   R K +YC+FHRDHGH+T++C  LK+E+E LI
Sbjct: 405 TVPIEQVLMEIKDQRLLKWPERMKASSAKRSKGRYCLFHRDHGHATQDCFDLKEEVEGLI 464

Query: 306 RNGYLKEFTTKAEANQRWSRPTRDDPSKD----DGGPPLAEADQAR-ADQAEA 354
           R GYLKE+  + +A Q  +  +   P+++     GGP   E+ + R AD  EA
Sbjct: 465 RRGYLKEYVEEPKATQ--NGESDKSPAREIRTIMGGPIERESGRKRKADVREA 513

[Close]

BLAST of Spg018372 vs. ExPASy TrEMBL
Match: A0A6J1DZ52 (uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025612 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.3e-20
Identity = 71/171 (41.52%), Postives = 100/171 (58.48%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKR-HFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTP 245
           +KYMS EE    K+ ELE KR     +   +K    + E++ R    Q D  +KFEKYTP
Sbjct: 29  QKYMSAEEFFHLKK-ELEGKRADQKRERSGEKPLSSKWEKQDR-VVGQKDLPRKFEKYTP 88

Query: 246 TSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEAL 305
           T++P EQ+LMEI++  LL  P  +K+ P+ R K +YC+FHRDHGH+T +C  LK+E+E L
Sbjct: 89  TTVPLEQVLMEIKDQRLLKWPETMKAPPNKRSKGRYCLFHRDHGHATLDCFDLKEEVEGL 148

Query: 306 IRNGYLKEFTTKAEANQRWSRPTRDDPSKDD--------GGPPLAEADQAR 348
           IR GYLKE+    +A      P R++ +K          GG    E+D+ R
Sbjct: 149 IRKGYLKEYVDDLKAT-----PNRENDNKSPTREIRTIMGGSTEQESDRKR 192

[Close]

BLAST of Spg018372 vs. ExPASy TrEMBL
Match: A0A6J1CNT2 (uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012805 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.2e-19
Identity = 57/136 (41.91%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPT 245
           ++YMS  E   SKR     +     +    K +  R E+R R    Q D  +KFEKYT T
Sbjct: 170 QRYMSAGEFFYSKRESNGKRTDQKRERSGDKPQGSRWEKRDRS--CQKDPPQKFEKYTST 229

Query: 246 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALI 305
           ++P EQ+LMEI+N  LL  P ++ ++   R K +YC+FH DHGH+T++C  LK+E+E LI
Sbjct: 230 TVPLEQVLMEIKNQRLLKWPERMNASSTKRSKGRYCLFHWDHGHATQDCFDLKEEVEGLI 289

Query: 306 RNGYLKEFTTKAEANQ 322
             GYLKE+  + +A Q
Sbjct: 290 LRGYLKEYVEEPKATQ 303

[Close]

BLAST of Spg018372 vs. ExPASy TrEMBL
Match: A0A6J1DYL6 (uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025785 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-18
Identity = 70/175 (40.00%), Postives = 102/175 (58.29%), Query Frame = 0


Query: 186 EKYMSVEELLKSKRSELEHKRHFSSDHDNKKDKRKRTEERGRGRPDQGDYLKKFEKYTPT 245
           ++YMS  E   SKR E + KR      +   DK + +    R R  Q D  +KFEKYTPT
Sbjct: 129 QRYMSAGEFFYSKR-EPDGKR-TDQKRERSGDKPQGSRWEKRDRSSQKDPPRKFEKYTPT 188

Query: 246 SIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDEIEALI 305
           ++P EQ+LMEI++  LL  P ++K     R K +YC+FHRDH H+T++   LK+E+E LI
Sbjct: 189 TVPLEQVLMEIKDQRLLKWPERMKVPSTKRSKGRYCLFHRDHNHATQDYFDLKEEVEGLI 248

Query: 306 RNGYLKEFTTKAEANQRWSRPTRDDPSKD----DGGPPLAE-ADQARADQAEADP 356
           R GYL+E+  + +A Q  +  +   P+++     GGP   E A + +AD  EA P
Sbjct: 249 RRGYLQEYVEEPKATQ--NGESEKSPAREIRTIMGGPIERESARKRKADVREARP 299

[Close]

BLAST of Spg018372 vs. ExPASy TrEMBL
Match: A0A6J1DP33 (uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022886 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-16
Identity = 42/81 (51.85%), Postives = 59/81 (72.84%), Query Frame = 0


Query: 241 KYTPTSIPQEQILMEIRNTNLLNVPRKLKSNPDNRDKSQYCIFHRDHGHSTRNCIQLKDE 300
           K TPT++  EQ+LMEI++  LL  P ++K+ P  R K QY +FHRDHGH+T++C  LK+E
Sbjct: 4   KDTPTTVSLEQVLMEIKDQRLLKWPERMKAPPSKRSKGQYWLFHRDHGHATQDCFDLKEE 63

Query: 301 IEALIRNGYLKEFTTKAEANQ 322
           +E LIR+GYLKE+    +A Q
Sbjct: 64  VEGLIRSGYLKEYVEDPKATQ 84

The following BLAST results are available for this feature:

BLAST of Spg018372 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158830.1	4.0e-20	41.62	uncharacterized protein LOC111025293 [Momordica charantia]	[more]
XP_022159192.1	6.9e-20	41.52	uncharacterized protein LOC111025612 [Momordica charantia]	[more]
XP_022142767.1	1.7e-18	41.91	uncharacterized protein LOC111012805 [Momordica charantia]	[more]
XP_024042801.1	3.8e-18	37.06	uncharacterized protein LOC112099618 [Citrus clementina]	[more]
XP_022159368.1	6.4e-18	40.00	uncharacterized protein LOC111025785 [Momordica charantia]	[more]

BLAST of Spg018372 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg018372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DWY0	2.0e-20	41.62	uncharacterized protein LOC111025293 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DZ52	3.3e-20	41.52	uncharacterized protein LOC111025612 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CNT2	8.2e-19	41.91	uncharacterized protein LOC111012805 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1DYL6	3.1e-18	40.00	uncharacterized protein LOC111025785 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1DP33	2.2e-16	51.85	uncharacterized protein LOC111022886 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Spg018372 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..238
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 322..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..414
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..150
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018372.1	Spg018372.1	mRNA