Spg018361 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018361
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Eukaryotic translation initiation factor 3 subunit I
Location	scaffold3: 9328348 .. 9330355 (-)
RNA-Seq Expression	Spg018361
Synteny	Spg018361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCTAGATGTGTTCGAGGACATGATCCACCAAGCTGTGGCAAAAACTCTTGTTATTGCTGAAGGTTACAAGGCTGAGCAAGATGCCTTGAGGGAGATTCGGGCTAAAAGAGAGATGGAAAACCAAAGCATGAGGGATGAAGATGAGTTTTCGAGAAGAATGGATTTTGAAGAAGCTAAGAGAAAGAAAGAAGAGGAAAAGCAAGAGGTCGAGAGGGCCAGGTTAGCTGAAGAAAAAGAGAGAAAACAAGATGAAAAACTAAGGAGACTTGCTGCTGAATTGAAGCTCCTTGAGGAAGAAAAACATAGAAGGGAAAACTTGAGGGAAGAAGAAAAAAAAAGAAAAGAAGCCGAAAACTTCCTTGCGGCCTTTGAGCCACTGCACCAAGCTCAAATTGAGGCTGATTTGCTGCAAGGAAGAGAAAAAGGGGCCCTTGAGAAGCCAAGTGAAGAAGACCAAGAAAAAGAAGATGGGGGCCAAAATGCGGCTGCATTCGGGCCGCATTCTAAAGAAGGCCAAGATGAGGCCACCAATGAACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAATATGATCCACCTGCTGTGAGCACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAACGAGGAGGGCGAGATCTCCAGTGATTCAGAAACAGAATCTGATTTAGAGATTAAGGAATTGGATGATGACCAAATTCCTATCTCTGTAGCATTGAGGAAAAAGAGAAGAAGAGAGATTAGGGTCGAAAGGAGGACCAAAAACAAGAATGACCCCATATTTGTCAAGAGGTCGAGGACTAGGTCTATGGACGCCTCCCCAATACCTCCTCCAACCGTCTCACCTATCAAGCCCAAGGTCAAATCACCTAATGCTCCATCTCCTAAAAATCTTTTCCTCGAAGTCTTTAAAGATGTCAATTTTCAAGAACGGATGGAGATCATGAGAAAAAGCGATTTTCTAAACGAGAAGGGATTCTCTAACAGAGATGGGACACTGCTAGAGTTCGTAACCAGAGTTATCTCACAATACAAGTGGCAGGAGTTATGTGCTAACCCACAGAAGGCCATGGTGCCTTTAGTTCGAGAACTTTACGCCGGACTGAGGGAGAAAAGCAGAAGTATGGCAGTGGTGAGAGGGAAGATGGTCAGCTTCTCTTCTATTGACATCAACAGGGTGTACAGAATCAAAACACCCTTGCATCCAAGAGGAAACGATGCCATTAGGAACCCCTCGGCCAAATAGATGAAAGATGCGCTAAAATTGGTGGCTAACAAGGGAGCTCAATGGAAAGAGTCCCAGACTAAGGTGAAGACATTAGTGCCAAGCGACCTAAAGCCTGAATCTTCAATGTGGCTTCACTTTATCAAGAACCGGTTGATGCCAACAACCCATGACAGCACCAATCTCAGTAGAGGGACTTATGCACCTCTACAGTATTATGAAGGGTTTGGAGATCAACATTGGGAGCATTATCAGGGAGGAAAACCTTTCCTTTTGAAGGAAAAGAGCAGGAAAGCTTTTCTTTGGGTCATTGATCACCCAGCTATGTCAGAGGGTGAAGATAGTCCTTGGTAAAGATGAGGAGCGTCACATCTTCAGGCCTACCATCGACCTATCCTTAATTGGGAAGCTCCAACAGAATAACGCCCAAAGAAAAGACAAAGCTTCTACATCTCAAGGCACTCCACCATCAGGGCTAAACACGACTTCTCCACCTTAGCACACTTCTTTCTCAAGGCCAACACCATCATCTGAGGCCCTAGCATTTGTCTACCAACAACTAAATCAAATCAAGGATAACATGAGGACTTATTGGGCTTATGCAAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGTCCCGAGTATTGCTCTTGTCTTCCCTGATTCCCCTCAATCATTGTTGCCTCAAGAAGAGAAGGATTCTAAAGATGAAGATGAAGATGAGAATGAAGAAGAGATGCCCTCAGATGAGGATTAG

mRNA sequence

ATGCCTCTAGATGTGTTCGAGGACATGATCCACCAAGCTGTGGCAAAAACTCTTGTTATTGCTGAAGGTTACAAGGCTGAGCAAGATGCCTTGAGGGAGATTCGGGCTAAAAGAGAGATGGAAAACCAAAGCATGAGGGATGAAGATGAGTTTTCGAGAAGAATGGATTTTGAAGAAGCTAAGAGAAAGAAAGAAGAGGAAAAGCAAGAGGTCGAGAGGGCCAGGTTAGCTGAAGAAAAAGAGAGAAAACAAGATGAAAAACTAAGGAGACTTGCTGCTGAATTGAAGCTCCTTGAGGAAGAAAAACATAGAAGGGAAAACTTGAGGGAAGAAGAAAAAAAAAGAAAAGAAGCCGAAAACTTCCTTGCGGCCTTTGAGCCACTGCACCAAGCTCAAATTGAGGCTGATTTGCTGCAAGGAAGAGAAAAAGGGGCCCTTGAGAAGCCAAGTGAAGAAGACCAAGAAAAAGAAGATGGGGGCCAAAATGCGGCTGCATTCGGGCCGCATTCTAAAGAAGGCCAAGATGAGGCCACCAATGAACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAATATGATCCACCTGCTGTGAGCACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAACGAGGAGGGCGAGATCTCCAGTGATTCAGAAACAGAATCTGATTTAGAGATTAAGGAATTGGATGATGACCAAATTCCTATCTCTGTAGCATTGAGGAAAAAGAGAAGAAGAGAGATTAGGGTCGAAAGGAGGACCAAAAACAAGAATGACCCCATATTTGTCAAGAGGTCGAGGACTAGGTCTATGGACGCCTCCCCAATACCTCCTCCAACCGTCTCACCTATCAAGCCCAAGGTCAAATCACCTAATGCTCCATCTCCTAAAAATCTTTTCCTCGAAGTCTTTAAAGATGTCAATTTTCAAGAACGGATGGAGATCATGAGAAAAAGCGATTTTCTAAACGAGAAGGGATTCTCTAACAGAGATGGGACACTGCTAGAGTTCGTAACCAGAGTTATCTCACAATACAAGTGGCAGGAGTTATGTGCTAACCCACAGAAGGCCATGGTGCCTTTAGTTCGAGAACTTTACGCCGGACTGAGGGAGAAAAGCAGAAGTATGGCAGTGATGAAAGATGCGCTAAAATTGGTGGCTAACAAGGGAGCTCAATGGAAAGAGTCCCAGACTAAGGTGAAGACATTAGTGCCAAGCGACCTAAAGCCTGAATCTTCAATGTGGCTTCACTTTATCAAGAACCGGTTGATGCCAACAACCCATGACAGCACCAATCTCAGTAGAGGGACTTATGCACCTCTACAGTATTATGAAGGGTTTGGAGATCAACATTGGGAGCATTATCAGGGAGGAAAACCTTTCCTTTTGAAGGAAAAGAGCAGGAAAGCTTTTCTTTGGGTCATTGATCACCCAGCTATGTCAGAGGGTGAAGATAGTCCTTGGCCAACACCATCATCTGAGGCCCTAGCATTTGTCTACCAACAACTAAATCAAATCAAGGATAACATGAGGACTTATTGGGCTTATGCAAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGTCCCGAGTATTGCTCTTGTCTTCCCTGATTCCCCTCAATCATTGTTGCCTCAAGAAGAGAAGGATTCTAAAGATGAAGATGAAGATGAGAATGAAGAAGAGATGCCCTCAGATGAGGATTAG

Coding sequence (CDS)

ATGCCTCTAGATGTGTTCGAGGACATGATCCACCAAGCTGTGGCAAAAACTCTTGTTATTGCTGAAGGTTACAAGGCTGAGCAAGATGCCTTGAGGGAGATTCGGGCTAAAAGAGAGATGGAAAACCAAAGCATGAGGGATGAAGATGAGTTTTCGAGAAGAATGGATTTTGAAGAAGCTAAGAGAAAGAAAGAAGAGGAAAAGCAAGAGGTCGAGAGGGCCAGGTTAGCTGAAGAAAAAGAGAGAAAACAAGATGAAAAACTAAGGAGACTTGCTGCTGAATTGAAGCTCCTTGAGGAAGAAAAACATAGAAGGGAAAACTTGAGGGAAGAAGAAAAAAAAAGAAAAGAAGCCGAAAACTTCCTTGCGGCCTTTGAGCCACTGCACCAAGCTCAAATTGAGGCTGATTTGCTGCAAGGAAGAGAAAAAGGGGCCCTTGAGAAGCCAAGTGAAGAAGACCAAGAAAAAGAAGATGGGGGCCAAAATGCGGCTGCATTCGGGCCGCATTCTAAAGAAGGCCAAGATGAGGCCACCAATGAACAGCCAGCTGATGAGGTTTTCGAACCTCTATTCAAATATGATCCACCTGCTGTGAGCACCTCTTCGGGAGAGAAGAGGGATGAAGAAGAGAAAGAAAACGAGGAGGGCGAGATCTCCAGTGATTCAGAAACAGAATCTGATTTAGAGATTAAGGAATTGGATGATGACCAAATTCCTATCTCTGTAGCATTGAGGAAAAAGAGAAGAAGAGAGATTAGGGTCGAAAGGAGGACCAAAAACAAGAATGACCCCATATTTGTCAAGAGGTCGAGGACTAGGTCTATGGACGCCTCCCCAATACCTCCTCCAACCGTCTCACCTATCAAGCCCAAGGTCAAATCACCTAATGCTCCATCTCCTAAAAATCTTTTCCTCGAAGTCTTTAAAGATGTCAATTTTCAAGAACGGATGGAGATCATGAGAAAAAGCGATTTTCTAAACGAGAAGGGATTCTCTAACAGAGATGGGACACTGCTAGAGTTCGTAACCAGAGTTATCTCACAATACAAGTGGCAGGAGTTATGTGCTAACCCACAGAAGGCCATGGTGCCTTTAGTTCGAGAACTTTACGCCGGACTGAGGGAGAAAAGCAGAAGTATGGCAGTGATGAAAGATGCGCTAAAATTGGTGGCTAACAAGGGAGCTCAATGGAAAGAGTCCCAGACTAAGGTGAAGACATTAGTGCCAAGCGACCTAAAGCCTGAATCTTCAATGTGGCTTCACTTTATCAAGAACCGGTTGATGCCAACAACCCATGACAGCACCAATCTCAGTAGAGGGACTTATGCACCTCTACAGTATTATGAAGGGTTTGGAGATCAACATTGGGAGCATTATCAGGGAGGAAAACCTTTCCTTTTGAAGGAAAAGAGCAGGAAAGCTTTTCTTTGGGTCATTGATCACCCAGCTATGTCAGAGGGTGAAGATAGTCCTTGGCCAACACCATCATCTGAGGCCCTAGCATTTGTCTACCAACAACTAAATCAAATCAAGGATAACATGAGGACTTATTGGGCTTATGCAAAGGAGAGAGATGAAGCCATTAGAGAGTTCTACCTCTCTATCGTCCCGAGTATTGCTCTTGTCTTCCCTGATTCCCCTCAATCATTGTTGCCTCAAGAAGAGAAGGATTCTAAAGATGAAGATGAAGATGAGAATGAAGAAGAGATGCCCTCAGATGAGGATTAG

Protein sequence

MPLDVFEDMIHQAVAKTLVIAEGYKAEQDALREIRAKREMENQSMRDEDEFSRRMDFEEAKRKKEEEKQEVERARLAEEKERKQDEKLRRLAAELKLLEEEKHRRENLREEEKKRKEAENFLAAFEPLHQAQIEADLLQGREKGALEKPSEEDQEKEDGGQNAAAFGPHSKEGQDEATNEQPADEVFEPLFKYDPPAVSTSSGEKRDEEEKENEEGEISSDSETESDLEIKELDDDQIPISVALRKKRRREIRVERRTKNKNDPIFVKRSRTRSMDASPIPPPTVSPIKPKVKSPNAPSPKNLFLEVFKDVNFQERMEIMRKSDFLNEKGFSNRDGTLLEFVTRVISQYKWQELCANPQKAMVPLVRELYAGLREKSRSMAVMKDALKLVANKGAQWKESQTKVKTLVPSDLKPESSMWLHFIKNRLMPTTHDSTNLSRGTYAPLQYYEGFGDQHWEHYQGGKPFLLKEKSRKAFLWVIDHPAMSEGEDSPWPTPSSEALAFVYQQLNQIKDNMRTYWAYAKERDEAIREFYLSIVPSIALVFPDSPQSLLPQEEKDSKDEDEDENEEEMPSDED

Homology

The following BLAST results are available for this feature:

BLAST of Spg018361 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018361 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018361 vs.


Match Name	E-value	Identity	Description

BLAST of Spg018361 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 546..575
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..297
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 557..575
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..159

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018361.1	Spg018361.1	mRNA