Spg018336 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCCAGGACAACACAAACATGATGCAGCTTAATCAGTTGTGTAATCCATTATCAAAATTTCAAGATATGAATCCACCATCCTTGAGCAGTAACTCAACTTCTGATGAAGCAGAAGACCAACAACTGAGCCTCATCAATGAGAGGAAACAGAGGAGGATGATATCAAATCGAGAGTCTGCACGCCGATCGCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTCCTTTGGCTCCGGAATGAAAACCACCAGCTAATAGATAAGCTGAACCAAGTTTCTGAGTGTCATGATCGGGCTCTACAGGAGAATGCTCAGCTTAAGGAGGAAGCATCTGAGCTTCGTCAAATGCTCACCGACTTCCAACTTCATAATCCTTACCTACCTTGA ATGTCCCAGGACAACACAAACATGATGCAGCTTAATCAGTTGTGTAATCCATTATCAAAATTTCAAGATATGAATCCACCATCCTTGAGCAGTAACTCAACTTCTGATGAAGCAGAAGACCAACAACTGAGCCTCATCAATGAGAGGAAACAGAGGAGGATGATATCAAATCGAGAGTCTGCACGCCGATCGCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTCCTTTGGCTCCGGAATGAAAACCACCAGCTAATAGATAAGCTGAACCAAGTTTCTGAGTGTCATGATCGGGCTCTACAGGAGAATGCTCAGCTTAAGGAGGAAGCATCTGAGCTTCGTCAAATGCTCACCGACTTCCAACTTCATAATCCTTACCTACCTTGA ATGTCCCAGGACAACACAAACATGATGCAGCTTAATCAGTTGTGTAATCCATTATCAAAATTTCAAGATATGAATCCACCATCCTTGAGCAGTAACTCAACTTCTGATGAAGCAGAAGACCAACAACTGAGCCTCATCAATGAGAGGAAACAGAGGAGGATGATATCAAATCGAGAGTCTGCACGCCGATCGCGAATGCGCAAGCAAAAGCATTTGGATGAGCTGTGGTCTCAGGTCCTTTGGCTCCGGAATGAAAACCACCAGCTAATAGATAAGCTGAACCAAGTTTCTGAGTGTCATGATCGGGCTCTACAGGAGAATGCTCAGCTTAAGGAGGAAGCATCTGAGCTTCGTCAAATGCTCACCGACTTCCAACTTCATAATCCTTACCTACCTTGA MSQDNTNMMQLNQLCNPLSKFQDMNPPSLSSNSTSDEAEDQQLSLINERKQRRMISNRESARRSRMRKQKHLDELWSQVLWLRNENHQLIDKLNQVSECHDRALQENAQLKEEASELRQMLTDFQLHNPYLP Homology
BLAST of Spg018336 vs. NCBI nr
Match: XP_038905338.1 (basic leucine zipper 43-like [Benincasa hispida]) HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58 Identity = 127/138 (92.03%), Postives = 129/138 (93.48%), Query Frame = 0
BLAST of Spg018336 vs. NCBI nr
Match: XP_004137148.1 (basic leucine zipper 43 [Cucumis sativus]) HSP 1 Score: 235.3 bits (599), Expect = 2.9e-58 Identity = 126/136 (92.65%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of Spg018336 vs. NCBI nr
Match: XP_022155056.1 (LOW QUALITY PROTEIN: basic leucine zipper 43-like [Momordica charantia]) HSP 1 Score: 224.6 bits (571), Expect = 5.2e-55 Identity = 122/136 (89.71%), Postives = 124/136 (91.18%), Query Frame = 0
BLAST of Spg018336 vs. NCBI nr
Match: XP_016901802.1 (PREDICTED: basic leucine zipper 43 [Cucumis melo] >TYJ99666.1 basic leucine zipper 43 [Cucumis melo var. makuwa]) HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54 Identity = 123/139 (88.49%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of Spg018336 vs. NCBI nr
Match: XP_022955729.1 (basic leucine zipper 43-like [Cucurbita moschata] >KAG7018187.1 Basic leucine zipper 43, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.1 bits (562), Expect = 5.7e-54 Identity = 121/138 (87.68%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy Swiss-Prot
Match: Q9FMC2 (Basic leucine zipper 43 OS=Arabidopsis thaliana OX=3702 GN=BZIP43 PE=1 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 3.9e-29 Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy Swiss-Prot
Match: Q9CA46 (Basic leucine zipper 8 OS=Arabidopsis thaliana OX=3702 GN=BZIP8 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.4e-17 Identity = 56/118 (47.46%), Postives = 82/118 (69.49%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy Swiss-Prot
Match: Q9SI15 (bZIP transcription factor 2 OS=Arabidopsis thaliana OX=3702 GN=BZIP2 PE=1 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 5.3e-10 Identity = 39/94 (41.49%), Postives = 60/94 (63.83%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy Swiss-Prot
Match: C0Z2L5 (bZIP transcription factor 44 OS=Arabidopsis thaliana OX=3702 GN=BZIP44 PE=1 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.8e-09 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy Swiss-Prot
Match: Q9LZP8 (bZIP transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=BZIP53 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.2e-08 Identity = 36/89 (40.45%), Postives = 61/89 (68.54%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy TrEMBL
Match: A0A0A0KZE6 (BZIP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G122810 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 126/136 (92.65%), Postives = 128/136 (94.12%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy TrEMBL
Match: A0A6J1DQJ9 (LOW QUALITY PROTEIN: basic leucine zipper 43-like OS=Momordica charantia OX=3673 GN=LOC111022194 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55 Identity = 122/136 (89.71%), Postives = 124/136 (91.18%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy TrEMBL
Match: A0A5D3BKJ6 (Basic leucine zipper 43 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold562G00520 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54 Identity = 123/139 (88.49%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy TrEMBL
Match: A0A1S4E0N4 (basic leucine zipper 43 OS=Cucumis melo OX=3656 GN=LOC103495718 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54 Identity = 123/139 (88.49%), Postives = 124/139 (89.21%), Query Frame = 0
BLAST of Spg018336 vs. ExPASy TrEMBL
Match: A0A6J1GX45 (basic leucine zipper 43-like OS=Cucurbita moschata OX=3662 GN=LOC111457640 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54 Identity = 121/138 (87.68%), Postives = 123/138 (89.13%), Query Frame = 0
BLAST of Spg018336 vs. TAIR 10
Match: AT3G30530.1 (basic leucine-zipper 42 ) HSP 1 Score: 147.9 bits (372), Expect = 5.7e-36 Identity = 79/111 (71.17%), Postives = 96/111 (86.49%), Query Frame = 0
BLAST of Spg018336 vs. TAIR 10
Match: AT5G38800.1 (basic leucine-zipper 43 ) HSP 1 Score: 129.0 bits (323), Expect = 2.8e-30 Identity = 66/99 (66.67%), Postives = 83/99 (83.84%), Query Frame = 0
BLAST of Spg018336 vs. TAIR 10
Match: AT1G13600.1 (basic leucine-zipper 58 ) HSP 1 Score: 125.6 bits (314), Expect = 3.0e-29 Identity = 75/125 (60.00%), Postives = 96/125 (76.80%), Query Frame = 0
BLAST of Spg018336 vs. TAIR 10
Match: AT5G15830.1 (basic leucine-zipper 3 ) HSP 1 Score: 122.1 bits (305), Expect = 3.4e-28 Identity = 74/132 (56.06%), Postives = 99/132 (75.00%), Query Frame = 0
BLAST of Spg018336 vs. TAIR 10
Match: AT2G04038.1 (basic leucine-zipper 48 ) HSP 1 Score: 117.9 bits (294), Expect = 6.4e-27 Identity = 70/127 (55.12%), Postives = 94/127 (74.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|