Spg018248 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018248
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	SWIM-type domain-containing protein
Location	scaffold3: 8556105 .. 8559526 (-)
RNA-Seq Expression	Spg018248
Synteny	Spg018248

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGCCATCGCACCACATTGATGTCACTGTCTCATTGCCCGAATTGAAAGGGCTTAGAGAAGAAGCCTTGCAGTTGCTTGCGCTCAGCATCAAAATCAGGGTTGCCATTACCGTCGCCACTGCCGCAATTGCAGCTCCCCTGTTTGATGATTGTCCCATGGAATTAGGATTGGTAGCAGAAGATGTTTGAGAGGATAAGAAGAGAAGGGTGATAAGAATCTGTGGATCGAAGCTCAGTTTATAGAAATTAGAAAAAAATAAAGAAAAAATAAATAAAAATTAAATTAAATGATTCACATGGCCTTCACTATCAAAGGAGTTCGATTTTTTTTTGTTCTCTTCCTTTGCCGACAGTTCGATAACAATGAATGTATACCATATATATATCACAGCAATCCAGACATCAAATCTGTTTCATTTGAGTAAATATTTATTTTTACCATTCTAGTTACATCAATCCAATCATATACCTGTGTTAAACACAAAAAGATAGTGTTGGGGCCAGTGACAGGATATGCACTCCATATTGGGATTGTGTTGAGTCAAAACCATTTTGTCGTGCATGAAAAGAAAAGAAGAAGAATGGGCCAAGGCCCATTTACCTTAGGTTTTATGTATTTATATAGATATATATAGGTGCACGTTGTGGGGCTGAAAAAAAAAGGGGAATTGTGCTAAATGACTACAAAAAAAAAGCATTCTTGATTTTTGGCTACGGAAGTTTGGATTTTGTAGGCGTGGCTACCGAGATTTTAGGAACCGTTTCCTGGTTTTTTTTGGACTTTTTTACCCCTGGTATATACGACTAAATACAGACGGCGTTAACGTTTGTTTTTTTCCACGCAGGTTGCTCGCCCTTTTTTTGCTCCCTGGATGTATCCCGATTTACACGGGATTCTGGTGGCCGGTCTGTTTTGATCGTTTAGAAACTACCTATTGTTCAGGAGTAGGTAGTTTCTAACAATTATTTTTTTATTCCTCCACATTTTTGTCCCTCATATAAATGTCATAGTTTATTATCTATTTGTTTCATATCACGATCACATTGCCATTGTAATTTTCCTTCCTAATCTAACATGGCGACAGTTCAACAGGTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCGAATCTCCAAGAGTTTAAAGTATGTCTGGCGAAATACCTCCATCTCCAGGACGTCAATATGATTACTCGTCTAACACTTTTCAGGAGCTGGTCGAATAACCCAATTAATATAATCATTTCGGAGGACAGAGATGTTTTTTGGATGGTCAACGGATTTCAAAACAGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGGGTGTCAATACTGGTATACACCCCGTGGGGACAGACGCGGGCCCATCTCGTGGGGTTTGGAATTTTGATTTCATCACTGCGGATGGTATTGAAGCTGCTCTAGACAATTCTACTGTGTCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTGAAGAAGGCTGTGTATAACATAGCCCTGAAAGAAAGTTTCCAGTTGAAGACTGTTAAATCTAACAACAAGCAGTTCAAGGTATCATGTGTAGACGTTTCGTGTCCGTGGTATATACGTGCATCTACATACCACGGGAGTCAAATTTGGATTGTCCGGAAGTTTAGCAATGAGCACACGTGTTCCTTTGATGCAGTTCATAATGACCACAGGCAGGCTACTGCGGCTGTTGCTTGCGATTATGCGAAAGCTATAATGAGAATTACTAACAAGATGCACTGCACGCCGCGTGATATAATTGAATACGCTAAGAAAACCCACGGTGTCATTCTCAGTTACGACAAAGCATGGAGGGGGAGGGAGAAGGCACTGACTGAGTTAAGAGGTTCCCCCGAAGAGTCGTATGCCCGTATTCCAGCATTTGCAGCTAAGTTGATCGAAAAAAACCCAGGTATTTCTCGCTTTTACCTGGATAGTACTACCAGTAAATACTGGTATTTACCAATAGTTTGTTTTCCAACATTTTGTTTCCCCAAAGAGTAGCAATATTAGTAAATACTTATATTTACTAACATTCTGTTTTTCAGGGACGTATACTGCTCAGGAGGTTGATTTGAACGACAGGTTCAAATTCTTTTTTATGAGTATTGCAGCGTCCATCGAGGGTTGGAAATATTGCCTGCCAGTCATTTCGGTGGATGGCACATCACTCAAAAACAGGTTCAATGGTACGCTCCTAACAGCCTGCACATTCGATGGCAACTTACAGATATTCCCACTGGCGTTCTCTATTGTTGACTCCGAAAACGACGCGTCGTGGGAGTGGTTTTTTCAAAATTTGAAAGCAGCTTTTGGAGAACCGAATGATCTTGTTATAGTGTCTGACAGGCACAAGAGCATTGGTAATGGGGTGAGGAAGGTATATACGTCAACGCACCATGGCGTGTGTATCTATCATTTGCTAAGGAACATCAAGTCAGACCATAAGTCGAAGGGGATTGACGAACTGTTTTACAAGTGTGCTAAATCGTACACCATTGGTGAGTTTGAATACTATATGAGGCAGATGGAGCAAATTATCCCCTCGATTAGGAGTGAGCTGGAGGAGGTAGGGTATGCGCGGTGGTCTCGTGCATTCTCCACGAGCAAACGGTATGTATTGATGACCACTAATGTCTCCGAGAGTCTAAACGCTTTTTTGATTGAGGCTCGTGGACTACCTATAATTCCATTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTACGAGAGGAGGAACCATGCAACCTTCCAAATTACTACCATTACTGACTATGCAGCTGGGGAAATACGGGATGCATTGAAAGCAAGCCGCACTATGGATGTATGCACTTTACAATGTTTTTTGGTAAAGTAGTTTTATATTTACGTATACACAGCTAATAATGTCTGGTATTTTGGCGTTAATACGCAGATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGGTAAACATCACCAACCGGAGTTGTACGTGCAGGAGGTGGGAGTCCGATCTTATCCCGTGCGCTCATGCTTGCATAGCTATTTGTCGCAAAGGTTTGAACATTGATACCTTTGTTCATGAGTTTTATCGGAACTCAAACCTGCAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTCCATGAGGCAAGACATGTCCACATTGGCGGTTGAGGCGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCGAGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA

mRNA sequence

ATGCGGCCATCGCACCACATTGATGTCACTGTCTCATTGCCCGAATTGAAAGGGCTTAGAGAAGAAGCCTTGCAGTTGCTTGCGCTCAGCATCAAAATCAGGGTTGCCATTACCGTCGCCACTGCCGCAATTGCAGCTCCCCTGTTTGATGATTGTCCCATGGAATTAGGATTGGTAGCAGAAGATGTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCGAATCTCCAAGAGTTTAAAGTATGTCTGGCGAAATACCTCCATCTCCAGGACGTCAATATGATTACTCGTCTAACACTTTTCAGGAGCTGGTCGAATAACCCAATTAATATAATCATTTCGGAGGACAGAGATGTTTTTTGGATGGTCAACGGATTTCAAAACAGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGGGTGTCAATACTGGTATACACCCCGTGGGGACAGACGCGGGCCCATCTCGTGGGGTTTGGAATTTTGATTTCATCACTGCGGATGGTATTGAAGCTGCTCTAGACAATTCTACTGTGTCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTGAAGAAGGCTGTGTATAACATAGCCCTGAAAGAAAGTTTCCAGTTGAAGACTGTTAAATCTAACAACAAGCAGTTCAAGGTATCATGTGTAGACGTTTCGTGTCCGTGGTATATACGTGCATCTACATACCACGGGAGTCAAATTTGGATTGTCCGGAAGTTTAGCAATGAGCACACGTGTTCCTTTGATGCAGTTCATAATGACCACAGGCAGGCTACTGCGGCTTGTGCTAAATCGTACACCATTGGTGAGTTTGAATACTATATGAGGCAGATGGAGCAAATTATCCCCTCGATTAGGAGTGAGCTGGAGGAGGTAGGGTATGCGCGGTGGTCTCGTGCATTCTCCACGAGCAAACGGTATGTATTGATGACCACTAATGTCTCCGAGAGTCTAAACGCTTTTTTGATTGAGGCTCGTGGACTACCTATAATTCCATTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTACGAGAGGAGGAACCATGCAACCTTCCAAATTACTACCATTACTGACTATGCAGCTGGGGAAATACGGGATGCATTGAAAGCAAGCCGCACTATGGATATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGGTAAACATCACCAACCGGAGTTGTACGTGCAGGAGGTGGGAGTCCGATCTTATCCCGTGCGCTCATGCTTGCATAGCTATTTGTCGCAAAGGTTTGAACATTGATACCTTTGTTCATGAGTTTTATCGGAACTCAAACCTGCAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTCCATGAGGCAAGACATGTCCACATTGGCGGTTGAGGCGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCGAGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA

Coding sequence (CDS)

ATGCGGCCATCGCACCACATTGATGTCACTGTCTCATTGCCCGAATTGAAAGGGCTTAGAGAAGAAGCCTTGCAGTTGCTTGCGCTCAGCATCAAAATCAGGGTTGCCATTACCGTCGCCACTGCCGCAATTGCAGCTCCCCTGTTTGATGATTGTCCCATGGAATTAGGATTGGTAGCAGAAGATGTCACGATATTGTTTGGTGGTGTCTGGAGTGCTGAGGGTATTTACAGTGAATTCAAGTCCGGAAGCGTGGATGTTAGTAGTGATTCGAATCTCCAAGAGTTTAAAGTATGTCTGGCGAAATACCTCCATCTCCAGGACGTCAATATGATTACTCGTCTAACACTTTTCAGGAGCTGGTCGAATAACCCAATTAATATAATCATTTCGGAGGACAGAGATGTTTTTTGGATGGTCAACGGATTTCAAAACAGTACATACAGGGGGTGCTGTGTAGTCGTTGACATCCCGGGTGTCAATACTGGTATACACCCCGTGGGGACAGACGCGGGCCCATCTCGTGGGGTTTGGAATTTTGATTTCATCACTGCGGATGGTATTGAAGCTGCTCTAGACAATTCTACTGTGTCGGAGGGGTGCACATTTGCCTGCAAAGATCATCTGAAGAAGGCTGTGTATAACATAGCCCTGAAAGAAAGTTTCCAGTTGAAGACTGTTAAATCTAACAACAAGCAGTTCAAGGTATCATGTGTAGACGTTTCGTGTCCGTGGTATATACGTGCATCTACATACCACGGGAGTCAAATTTGGATTGTCCGGAAGTTTAGCAATGAGCACACGTGTTCCTTTGATGCAGTTCATAATGACCACAGGCAGGCTACTGCGGCTTGTGCTAAATCGTACACCATTGGTGAGTTTGAATACTATATGAGGCAGATGGAGCAAATTATCCCCTCGATTAGGAGTGAGCTGGAGGAGGTAGGGTATGCGCGGTGGTCTCGTGCATTCTCCACGAGCAAACGGTATGTATTGATGACCACTAATGTCTCCGAGAGTCTAAACGCTTTTTTGATTGAGGCTCGTGGACTACCTATAATTCCATTGTTGGAGTTTATAAGGGATTTTTTACAACGATGGTTTTACGAGAGGAGGAACCATGCAACCTTCCAAATTACTACCATTACTGACTATGCAGCTGGGGAAATACGGGATGCATTGAAAGCAAGCCGCACTATGGATATATACCCCGTCGACCGTTTGCAGTTCCAAGTTCATGACCAGAACAAGCAATTCGAGGTAAACATCACCAACCGGAGTTGTACGTGCAGGAGGTGGGAGTCCGATCTTATCCCGTGCGCTCATGCTTGCATAGCTATTTGTCGCAAAGGTTTGAACATTGATACCTTTGTTCATGAGTTTTATCGGAACTCAAACCTGCAGAAGATGTATAGTGCGAACGTGCACCCCATCGGCTCCATGAGGCAAGACATGTCCACATTGGCGGTTGAGGCGAACATAGTCCACCCGCCCATTTCGAAACGTGGTGCTGGGAGGCCAAAAAAGAAGAGGATTAGACCCCGGAGCGAGAGGGTCCAGACTCAAAGGTGTGGGCGGTGTGGGCAGCTAGGTCACAACAAGAGGACTTGCAACACCCCCATCGCTCGATGA

Protein sequence

MRPSHHIDVTVSLPELKGLREEALQLLALSIKIRVAITVATAAIAAPLFDDCPMELGLVAEDVTILFGGVWSAEGIYSEFKSGSVDVSSDSNLQEFKVCLAKYLHLQDVNMITRLTLFRSWSNNPINIIISEDRDVFWMVNGFQNSTYRGCCVVVDIPGVNTGIHPVGTDAGPSRGVWNFDFITADGIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQFKVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATAACAKSYTIGEFEYYMRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFIRDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNKQFEVNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSNLQKMYSANVHPIGSMRQDMSTLAVEANIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTCNTPIAR

Homology

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BLAST of Spg018248 vs. NCBI nr
Match: KAA0064137.1 (MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 285.4 bits (729), Expect = 1.0e-72
Identity = 204/705 (28.94%), Postives = 287/705 (40.71%), Query Frame = 0


Query: 58  LVAEDVTILFGGVWSAEGIYSEFKSGSVDVSSDSNLQEFKVCLAKYLHLQDVNMITRLTL 117
           +  + V  +F   W     Y +++   V V   S+ QEF  C+   L       ++RLTL
Sbjct: 1   MALQRVKTVFHDRWIESCRYIDYRLLDVYVPVSSSFQEFANCIQHRLFPNSEVSVSRLTL 60

Query: 118 FRSWSNNPINIIISEDRDVFWMVNGFQNSTYRGCCVVVD-IPGVNTGIHPVGTDAGPSRG 177
           +  + NN   I I +D+DV W++            +VVD  P  + G  P  +   P   
Sbjct: 61  YWKYCNNSKLIWIVDDKDVSWIMLVLSKFPDNDLLIVVDTAPATDIGNTPYMSSDLPRTE 120

Query: 178 VWNFDFITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQF 237
               + I  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN   F
Sbjct: 121 DSRSENIIIDLNAFESPNTLIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSF 180

Query: 238 KVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA----------- 297
            + C D +CPWY+RA     S I+  RKF++ H CS D V NDH+QAT+           
Sbjct: 181 NIRCKDPACPWYLRALVLKKSDIY--RKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIF 240

Query: 298 ------------------------------------------------------------ 357
                                                                       
Sbjct: 241 KMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALI 300

Query: 358 ------------------------------------------------------------ 417
                                                                       
Sbjct: 301 RNNPGTYTAEEADDEGWFKFYFMVLAASIDAWNYCVPVISVDGAAMKNKYLGTLISACTI 360

Query: 418 ------------------------------------------------------------ 477
                                                                       
Sbjct: 361 DGNSQIVPLAFVVVDSENDLSWSWFFRNLKAVFWEHNEMVIVSDAHKSIENGFNVVYEIA 420

Query: 478 ---------------------------ACAKSYTIGEFEYYMRQMEQIIPSIRSELEEVG 537
                                       C ++YT  EFEYYMRQ++Q+ PS+R ELE VG
Sbjct: 421 EHGLCAFHLLKNLKESHKSLPIEDSFNKCTRAYTPLEFEYYMRQLKQLSPSMRHELEAVG 480

Query: 538 YARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFIRDFLQRWFYERRNHAT 542
             +W+RAF   KRY +MTTN+SES+N+ L E R LP+I LLE +R  +++WFYERR   +
Sbjct: 481 RHKWARAFFKRKRYQVMTTNISESMNSTLKEQRELPVIGLLESVRSLIKKWFYERRTKWS 540

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BLAST of Spg018248 vs. NCBI nr
Match: XP_008455803.1 (PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo])

HSP 1 Score: 281.6 bits (719), Expect = 1.5e-71
Identity = 195/649 (30.05%), Postives = 266/649 (40.99%), Query Frame = 0


Query: 114 RLTLFRSWSNNPINIIISEDRDVFWMVNGFQNSTYRGCCVVVD-IPGVNTGIHPVGTDAG 173
           +LTL+    NN   I I +D+DV W++            VV+D  P  + G  P  +   
Sbjct: 50  KLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDIGNTPYMSSEL 109

Query: 174 PSRGVWNFDFITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSN 233
           P       + +  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN
Sbjct: 110 PRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSN 169

Query: 234 NKQFKVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA------- 293
              F + C D SCPWY+RAS +  S IWIVRKF   H CS D V NDH+QAT+       
Sbjct: 170 RTSFDIRCKDPSCPWYLRASVFKRSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECT 229

Query: 294 ------------------------------------------------------------ 353
                                                                       
Sbjct: 230 KLIFKTNDKVPCRPSDVINYMKIHHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFS 289

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 290 DALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLIS 349

Query: 414 ------------------------------------------------------------ 473
                                                                       
Sbjct: 350 TCTIDGNSQIVPLPFAVVDSENDLSWSWFFRNLKAVFGEHNEMLIVSDAYKSIENGFNAV 409

Query: 474 -------------------------------ACAKSYTIGEFEYYMRQMEQIIPSIRSEL 533
                                           CA++YT+ EFEYYMRQ+EQ+ PS+R EL
Sbjct: 410 YEIAEHGLCAFHLLKNLKKNHKSLPMEDSFNKCARTYTLLEFEYYMRQLEQLSPSMRHEL 469

Query: 534 EEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFIRDFLQRWFYERR 542
           E VG  +W+RAF   KRY ++TTN+SES+N+ L E R LP+I LLE IR  +Q+WFYERR
Sbjct: 470 EAVGRHKWARAFFKRKRYQVITTNISESMNSTLKEQRELPVIGLLESIRSLIQKWFYERR 529

[Close]

BLAST of Spg018248 vs. NCBI nr
Match: TYK29863.1 (MuDRA-like transposase [Cucumis melo var. makuwa])

HSP 1 Score: 273.5 bits (698), Expect = 4.0e-69
Identity = 177/560 (31.61%), Postives = 235/560 (41.96%), Query Frame = 0


Query: 200 GCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQFKVSCVDVSCPWYIRASTYHGSQIWI 259
           G  F  K  LKKA+Y +AL  SF+L TV+SN   F + C D SCPWY+RAS +  S IWI
Sbjct: 64  GSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFKKSDIWI 123

Query: 260 VRKFSNEHTCSFDAVHNDHRQATA------------------------------------ 319
           VRKF++ H CS D V NDH+QAT+                                    
Sbjct: 124 VRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKIHHGVNI 183

Query: 320 ------------------------------------------------------------ 379
                                                                       
Sbjct: 184 SYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMAL 243

Query: 380 ------------------------------------------------------------ 439
                                                                       
Sbjct: 244 AASIDAWNYCVPVISVDGAAMKNKYLGTLISACTIDGNSQIVPLAFAVVDSENDLSWSWF 303

Query: 440 ------------------------------------------------------------ 499
                                                                       
Sbjct: 304 FRNLKAVFGEHNEMVIVSDAHKSIENGFNAVYEIAEHGLCAFHLLKNLKKNHKSLPMEDS 363

Query: 500 --ACAKSYTIGEFEYYMRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESL 542
              CA++YT  EFEYYMRQ+EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+
Sbjct: 364 FNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESM 423

[Close]

BLAST of Spg018248 vs. NCBI nr
Match: XP_022157216.1 (uncharacterized protein LOC111023978 [Momordica charantia])

HSP 1 Score: 270.4 bits (690), Expect = 3.4e-68
Identity = 126/245 (51.43%), Postives = 172/245 (70.20%), Query Frame = 0


Query: 298 MRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLL 357
           MR +EQ++P IR EL+E+GY +W+RAFST  R+ LMTTN+SES+N+   EAR LP+I LL
Sbjct: 1   MRHLEQVVPEIREELQEIGYEKWARAFSTKNRHGLMTTNISESINSTFSEARELPVICLL 60

Query: 358 EFIRDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNK 417
           + IRD +QRWFYERR+  ++Q   IT + A  +R +LK SRTMDIYPVD+  + VH+ ++
Sbjct: 61  QNIRDLMQRWFYERRSFYSYQQIDITPWTANALRSSLKESRTMDIYPVDQYLYDVHNDDR 120

Query: 418 QFEVNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSNLQKMYSANVHP 477
            F VNI + +C  ++W+ D IPC+HAC+AI R+GL + +FVH+FY    LQ +YS NVHP
Sbjct: 121 HFNVNILHCTCNFKQWDIDFIPCSHACLAISRRGLELHSFVHKFYHVKTLQLLYSWNVHP 180

Query: 478 IGSMRQDMSTLAVEANIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTC 537
           IG +   +  +  +   + PP  KR AGRP+KKR+  R E   T RCGRC +LGHN+R C
Sbjct: 181 IGQIENILPPVQPDDTGILPPNVKRSAGRPRKKRLISRVEATNTVRCGRCHKLGHNRRRC 240

Query: 538 NTPIA 543
             P A
Sbjct: 241 KNPPA 245

[Close]

BLAST of Spg018248 vs. NCBI nr
Match: TYK09853.1 (uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 2.9e-67
Identity = 131/257 (50.97%), Postives = 178/257 (69.26%), Query Frame = 0


Query: 285 CAKSYTIGEFEYYMRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAF 344
           CA++YT  EFEYYMRQ+EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+ + 
Sbjct: 193 CARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESMKST 252

Query: 345 LIEARGLPIIPLLEFIRDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYP 404
           L E R LP+I LLE IR  +Q+WFYERR   +FQ T ++ YA   IR++L  SR+M+IYP
Sbjct: 253 LKEQRELPVIGLLESIRSLIQKWFYERRTKWSFQYTQLSIYAEDMIRESLAQSRSMNIYP 312

Query: 405 VDRLQFQVHDQNKQFEVNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRN 464
           VD+ +F+VH + +QF VNI NR+C+CR+W+ DLIPC+HACIA+  + LN+  +  +FY  
Sbjct: 313 VDQHEFEVHHRKEQFVVNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYV 372

Query: 465 SNLQKMYSANVHPIGSMRQDMSTLAVEANIVHPPISKRGAGRPKKKRIRPRSERVQTQRC 524
           SNL  +Y     PIG++ Q  +T     + + PP  KR AGRPKKKR     E+  + RC
Sbjct: 373 SNLINLYKKGTRPIGTVNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRC 432

Query: 525 GRCGQLGHNKRTCNTPI 542
            RCG+ GHN R+C  PI
Sbjct: 433 SRCGKKGHNCRSCKEPI 449

[Close]

BLAST of Spg018248 vs. ExPASy TrEMBL
Match: A0A5A7VAU3 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00150 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 4.9e-73
Identity = 204/705 (28.94%), Postives = 287/705 (40.71%), Query Frame = 0


Query: 58  LVAEDVTILFGGVWSAEGIYSEFKSGSVDVSSDSNLQEFKVCLAKYLHLQDVNMITRLTL 117
           +  + V  +F   W     Y +++   V V   S+ QEF  C+   L       ++RLTL
Sbjct: 1   MALQRVKTVFHDRWIESCRYIDYRLLDVYVPVSSSFQEFANCIQHRLFPNSEVSVSRLTL 60

Query: 118 FRSWSNNPINIIISEDRDVFWMVNGFQNSTYRGCCVVVD-IPGVNTGIHPVGTDAGPSRG 177
           +  + NN   I I +D+DV W++            +VVD  P  + G  P  +   P   
Sbjct: 61  YWKYCNNSKLIWIVDDKDVSWIMLVLSKFPDNDLLIVVDTAPATDIGNTPYMSSDLPRTE 120

Query: 178 VWNFDFITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQF 237
               + I  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN   F
Sbjct: 121 DSRSENIIIDLNAFESPNTLIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSF 180

Query: 238 KVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA----------- 297
            + C D +CPWY+RA     S I+  RKF++ H CS D V NDH+QAT+           
Sbjct: 181 NIRCKDPACPWYLRALVLKKSDIY--RKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIF 240

Query: 298 ------------------------------------------------------------ 357
                                                                       
Sbjct: 241 KMNDKAPCCPSNVINYMKIHHDVNVSYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALI 300

Query: 358 ------------------------------------------------------------ 417
                                                                       
Sbjct: 301 RNNPGTYTAEEADDEGWFKFYFMVLAASIDAWNYCVPVISVDGAAMKNKYLGTLISACTI 360

Query: 418 ------------------------------------------------------------ 477
                                                                       
Sbjct: 361 DGNSQIVPLAFVVVDSENDLSWSWFFRNLKAVFWEHNEMVIVSDAHKSIENGFNVVYEIA 420

Query: 478 ---------------------------ACAKSYTIGEFEYYMRQMEQIIPSIRSELEEVG 537
                                       C ++YT  EFEYYMRQ++Q+ PS+R ELE VG
Sbjct: 421 EHGLCAFHLLKNLKESHKSLPIEDSFNKCTRAYTPLEFEYYMRQLKQLSPSMRHELEAVG 480

Query: 538 YARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFIRDFLQRWFYERRNHAT 542
             +W+RAF   KRY +MTTN+SES+N+ L E R LP+I LLE +R  +++WFYERR   +
Sbjct: 481 RHKWARAFFKRKRYQVMTTNISESMNSTLKEQRELPVIGLLESVRSLIKKWFYERRTKWS 540

[Close]

BLAST of Spg018248 vs. ExPASy TrEMBL
Match: A0A1S3C300 (uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 7.1e-72
Identity = 195/649 (30.05%), Postives = 266/649 (40.99%), Query Frame = 0


Query: 114 RLTLFRSWSNNPINIIISEDRDVFWMVNGFQNSTYRGCCVVVD-IPGVNTGIHPVGTDAG 173
           +LTL+    NN   I I +D+DV W++            VV+D  P  + G  P  +   
Sbjct: 50  KLTLYWKDGNNSKLIRIVDDKDVSWIMLVLSKLPDNDLLVVLDTAPATDIGNTPYMSSEL 109

Query: 174 PSRGVWNFDFITAD--GIEAALDNSTVSEGCTFACKDHLKKAVYNIALKESFQLKTVKSN 233
           P       + +  D    E+      +  G  F  K  LKKA+Y +AL  SF+L TV+SN
Sbjct: 110 PRTEDSRTENVIIDLNAFESPNTVIHIRVGSMFRQKSVLKKAIYMLALNSSFELVTVRSN 169

Query: 234 NKQFKVSCVDVSCPWYIRASTYHGSQIWIVRKFSNEHTCSFDAVHNDHRQATA------- 293
              F + C D SCPWY+RAS +  S IWIVRKF   H CS D V NDH+QAT+       
Sbjct: 170 RTSFDIRCKDPSCPWYLRASVFKRSDIWIVRKFIYTHMCSVDVVKNDHKQATSWIVSECT 229

Query: 294 ------------------------------------------------------------ 353
                                                                       
Sbjct: 230 KLIFKTNDKVPCRPSDVINYMKIHHSVNISYDKAWGGREIALNSIRGTPEDSYAMLSAFS 289

Query: 354 ------------------------------------------------------------ 413
                                                                       
Sbjct: 290 DALIRNNPGTYTAEEADDEGRFKFYFMALAASIDAWNYCVPVISVDGAAMKNKYLGTLIS 349

Query: 414 ------------------------------------------------------------ 473
                                                                       
Sbjct: 350 TCTIDGNSQIVPLPFAVVDSENDLSWSWFFRNLKAVFGEHNEMLIVSDAYKSIENGFNAV 409

Query: 474 -------------------------------ACAKSYTIGEFEYYMRQMEQIIPSIRSEL 533
                                           CA++YT+ EFEYYMRQ+EQ+ PS+R EL
Sbjct: 410 YEIAEHGLCAFHLLKNLKKNHKSLPMEDSFNKCARTYTLLEFEYYMRQLEQLSPSMRHEL 469

Query: 534 EEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLLEFIRDFLQRWFYERR 542
           E VG  +W+RAF   KRY ++TTN+SES+N+ L E R LP+I LLE IR  +Q+WFYERR
Sbjct: 470 EAVGRHKWARAFFKRKRYQVITTNISESMNSTLKEQRELPVIGLLESIRSLIQKWFYERR 529

[Close]

BLAST of Spg018248 vs. ExPASy TrEMBL
Match: A0A5D3E198 (MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G001100 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.9e-69
Identity = 177/560 (31.61%), Postives = 235/560 (41.96%), Query Frame = 0


Query: 200 GCTFACKDHLKKAVYNIALKESFQLKTVKSNNKQFKVSCVDVSCPWYIRASTYHGSQIWI 259
           G  F  K  LKKA+Y +AL  SF+L TV+SN   F + C D SCPWY+RAS +  S IWI
Sbjct: 64  GSMFRQKSVLKKAIYMLALNSSFELVTVRSNRTSFDIRCKDPSCPWYLRASVFKKSDIWI 123

Query: 260 VRKFSNEHTCSFDAVHNDHRQATA------------------------------------ 319
           VRKF++ H CS D V NDH+QAT+                                    
Sbjct: 124 VRKFTDTHLCSVDVVKNDHKQATSWIVSECTKLIFKTNDKAPCRPSDVINYMKIHHGVNI 183

Query: 320 ------------------------------------------------------------ 379
                                                                       
Sbjct: 184 SYDKAWRGREIALNSIRGTPEDSYAMLSAFSDALIRNNPGTYTAEEADDEGRFKFYFMAL 243

Query: 380 ------------------------------------------------------------ 439
                                                                       
Sbjct: 244 AASIDAWNYCVPVISVDGAAMKNKYLGTLISACTIDGNSQIVPLAFAVVDSENDLSWSWF 303

Query: 440 ------------------------------------------------------------ 499
                                                                       
Sbjct: 304 FRNLKAVFGEHNEMVIVSDAHKSIENGFNAVYEIAEHGLCAFHLLKNLKKNHKSLPMEDS 363

Query: 500 --ACAKSYTIGEFEYYMRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESL 542
              CA++YT  EFEYYMRQ+EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+
Sbjct: 364 FNKCARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESM 423

[Close]

BLAST of Spg018248 vs. ExPASy TrEMBL
Match: A0A6J1DXB4 (uncharacterized protein LOC111023978 OS=Momordica charantia OX=3673 GN=LOC111023978 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 1.6e-68
Identity = 126/245 (51.43%), Postives = 172/245 (70.20%), Query Frame = 0


Query: 298 MRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLPIIPLL 357
           MR +EQ++P IR EL+E+GY +W+RAFST  R+ LMTTN+SES+N+   EAR LP+I LL
Sbjct: 1   MRHLEQVVPEIREELQEIGYEKWARAFSTKNRHGLMTTNISESINSTFSEARELPVICLL 60

Query: 358 EFIRDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYPVDRLQFQVHDQNK 417
           + IRD +QRWFYERR+  ++Q   IT + A  +R +LK SRTMDIYPVD+  + VH+ ++
Sbjct: 61  QNIRDLMQRWFYERRSFYSYQQIDITPWTANALRSSLKESRTMDIYPVDQYLYDVHNDDR 120

Query: 418 QFEVNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRNSNLQKMYSANVHP 477
            F VNI + +C  ++W+ D IPC+HAC+AI R+GL + +FVH+FY    LQ +YS NVHP
Sbjct: 121 HFNVNILHCTCNFKQWDIDFIPCSHACLAISRRGLELHSFVHKFYHVKTLQLLYSWNVHP 180

Query: 478 IGSMRQDMSTLAVEANIVHPPISKRGAGRPKKKRIRPRSERVQTQRCGRCGQLGHNKRTC 537
           IG +   +  +  +   + PP  KR AGRP+KKR+  R E   T RCGRC +LGHN+R C
Sbjct: 181 IGQIENILPPVQPDDTGILPPNVKRSAGRPRKKRLISRVEATNTVRCGRCHKLGHNRRRC 240

Query: 538 NTPIA 543
             P A
Sbjct: 241 KNPPA 245

[Close]

BLAST of Spg018248 vs. ExPASy TrEMBL
Match: A0A5D3CDB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00210 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.4e-67
Identity = 131/257 (50.97%), Postives = 178/257 (69.26%), Query Frame = 0


Query: 285 CAKSYTIGEFEYYMRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAF 344
           CA++YT  EFEYYMRQ+EQ+ PS+R ELE VG  +W+RAF   KRY ++TTN+SES+ + 
Sbjct: 193 CARAYTPLEFEYYMRQLEQLSPSMRHELEAVGRHKWARAFFRRKRYQVITTNISESMKST 252

Query: 345 LIEARGLPIIPLLEFIRDFLQRWFYERRNHATFQITTITDYAAGEIRDALKASRTMDIYP 404
           L E R LP+I LLE IR  +Q+WFYERR   +FQ T ++ YA   IR++L  SR+M+IYP
Sbjct: 253 LKEQRELPVIGLLESIRSLIQKWFYERRTKWSFQYTQLSIYAEDMIRESLAQSRSMNIYP 312

Query: 405 VDRLQFQVHDQNKQFEVNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHEFYRN 464
           VD+ +F+VH + +QF VNI NR+C+CR+W+ DLIPC+HACIA+  + LN+  +  +FY  
Sbjct: 313 VDQHEFEVHHRKEQFVVNILNRTCSCRQWDLDLIPCSHACIALSTRNLNLHLYTDKFYYV 372

Query: 465 SNLQKMYSANVHPIGSMRQDMSTLAVEANIVHPPISKRGAGRPKKKRIRPRSERVQTQRC 524
           SNL  +Y     PIG++ Q  +T     + + PP  KR AGRPKKKR     E+  + RC
Sbjct: 373 SNLINLYKKGTRPIGTVNQIRNTHQGGNDGILPPQVKRPAGRPKKKRFTSFLEKKASVRC 432

Query: 525 GRCGQLGHNKRTCNTPI 542
            RCG+ GHN R+C  PI
Sbjct: 433 SRCGKKGHNCRSCKEPI 449

[Close]

BLAST of Spg018248 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-05
Identity = 43/198 (21.72%), Postives = 84/198 (42.42%), Query Frame = 0


Query: 293 EFEYYMRQMEQIIPSIRSELEEVGYARWSRAFSTSKRYVLMTTNVSESLNAFLIEARGLP 352
           EF+ YM  +++  P     L+++   +W+ A  +  RY +    +     A     RG P
Sbjct: 502 EFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYGI----IEIDREALFAVCRGFP 561

Query: 353 IIPLLEFIRDFLQRWFYERRNHATFQITTI----------TDYAAGEIRDALKASRTMDI 412
              +   +   +   F E R+     +++I          T+    ++ + +  S    I
Sbjct: 562 YCTVA--MTGGVMLMFDELRSSFDKSLSSIYSSLNRGVVYTEPFMDKLEEFMTDSIPYVI 621

Query: 413 YPVDRLQFQVHDQNKQFE--VNITNRSCTCRRWESDLIPCAHACIAICRKGLNIDTFVHE 472
             ++R  F+V + +++ E  V +   +CTCR+++S   PC HA     +  +N   +V E
Sbjct: 622 TQLERDSFKVSESSEKEEWIVQLNVSTCTCRKFQSYKFPCLHALAVFEKLKINPLQYVDE 681

Query: 473 FYRNSNLQKMYSANVHPI 479
            Y      K Y+A   P+
Sbjct: 682 CYTVEQYCKTYAATFSPV 693

The following BLAST results are available for this feature:

BLAST of Spg018248 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064137.1	1.0e-72	28.94	MuDRA-like transposase [Cucumis melo var. makuwa] >TYK28603.1 MuDRA-like transpo...	[more]
XP_008455803.1	1.5e-71	30.05	PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]	[more]
TYK29863.1	4.0e-69	31.61	MuDRA-like transposase [Cucumis melo var. makuwa]	[more]
XP_022157216.1	3.4e-68	51.43	uncharacterized protein LOC111023978 [Momordica charantia]	[more]
TYK09853.1	2.9e-67	50.97	uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]	[more]

BLAST of Spg018248 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg018248 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VAU3	4.9e-73	28.94	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S3C300	7.1e-72	30.05	uncharacterized protein LOC103495899 OS=Cucumis melo OX=3656 GN=LOC103495899 PE=...	[more]
A0A5D3E198	1.9e-69	31.61	MuDRA-like transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A6J1DXB4	1.6e-68	51.43	uncharacterized protein LOC111023978 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5D3CDB8	1.4e-67	50.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Spg018248 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64260.1	1.5e-05	21.72	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006564	Zinc finger, PMZ-type	SMART	SM00575	26again6	coord: 426..453 e-value: 8.4E-4 score: 27.5
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 196..259 e-value: 2.2E-10 score: 40.3
IPR007527	Zinc finger, SWIM-type	PFAM	PF04434	SWIM	coord: 421..443 e-value: 6.3E-4 score: 19.4
IPR007527	Zinc finger, SWIM-type	PROSITE	PS50966	ZF_SWIM	coord: 419..451 score: 9.383839
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 498..520
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 502..516
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 315..541
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 174..282
None	No IPR available	PANTHER	PTHR31973:SF137	OS02G0192200 PROTEIN	coord: 315..541
None	No IPR available	PANTHER	PTHR31973:SF137	OS02G0192200 PROTEIN	coord: 174..282
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 523..537 score: 8.762648

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018248.1	Spg018248.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding