Spg018109 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg018109
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Unknown protein
Location	scaffold9: 26216247 .. 26216768 (+)
RNA-Seq Expression	Spg018109
Synteny	Spg018109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGTTGAAGACGACTTCAGTTTCCCCACCGCCTTAGAGCCCTTCAGCCGCTGCGGCATCGACTCCCCGCCGCTCTGGCGCCTCTCTCCGGCCGCATCGCCCATTTCCTACTGTCAACAAGCCGCCTCCGATCGACAGTCCACGCCGCCCGCCGACAACAGCGATCGGTTCGCGTCGCTGAGATTTACAGCCTCCTTGCAGAGGAGGAGGAGATTCTCGAGCGACGCGGCCGCGGACGGCGAGGAGGAGGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAACGAGGAGTTATCGAGGAGTCGGAGATCCAGGTTGATGAAATCGGTGGAAATGGAATCGGTGGAGGAGATTGAGATTGTGAAGGCGCGGAGGCGTATGGCGGGATTGAACCTATCCGAGACTTCCGGCGCGGTGGCGACGACGAGGAAGACCACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAACAATTCCCGCCGGAATCTGCAAACTCGATCACGGTGA

mRNA sequence

ATGGCCGTTGAAGACGACTTCAGTTTCCCCACCGCCTTAGAGCCCTTCAGCCGCTGCGGCATCGACTCCCCGCCGCTCTGGCGCCTCTCTCCGGCCGCATCGCCCATTTCCTACTGTCAACAAGCCGCCTCCGATCGACAGTCCACGCCGCCCGCCGACAACAGCGATCGGTTCGCGTCGCTGAGATTTACAGCCTCCTTGCAGAGGAGGAGGAGATTCTCGAGCGACGCGGCCGCGGACGGCGAGGAGGAGGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAACGAGGAGTTATCGAGGAGTCGGAGATCCAGGTTGATGAAATCGGTGGAAATGGAATCGGTGGAGGAGATTGAGATTGTGAAGGCGCGGAGGCGTATGGCGGGATTGAACCTATCCGAGACTTCCGGCGCGGTGGCGACGACGAGGAAGACCACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAACAATTCCCGCCGGAATCTGCAAACTCGATCACGGTGA

Coding sequence (CDS)

ATGGCCGTTGAAGACGACTTCAGTTTCCCCACCGCCTTAGAGCCCTTCAGCCGCTGCGGCATCGACTCCCCGCCGCTCTGGCGCCTCTCTCCGGCCGCATCGCCCATTTCCTACTGTCAACAAGCCGCCTCCGATCGACAGTCCACGCCGCCCGCCGACAACAGCGATCGGTTCGCGTCGCTGAGATTTACAGCCTCCTTGCAGAGGAGGAGGAGATTCTCGAGCGACGCGGCCGCGGACGGCGAGGAGGAGGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAACGAGGAGTTATCGAGGAGTCGGAGATCCAGGTTGATGAAATCGGTGGAAATGGAATCGGTGGAGGAGATTGAGATTGTGAAGGCGCGGAGGCGTATGGCGGGATTGAACCTATCCGAGACTTCCGGCGCGGTGGCGACGACGAGGAAGACCACGGGGATTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAACAATTCCCGCCGGAATCTGCAAACTCGATCACGGTGA

Protein sequence

MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFASLRFTASLQRRRRFSSDAAADGEEEAAEKMDVLWENFNEELSRSRRSRLMKSVEMESVEEIEIVKARRRMAGLNLSETSGAVATTRKTTGIVKVLKKLFLMHNNSRRNLQTRSR

Homology

[Close]

BLAST of Spg018109 vs. NCBI nr
Match: XP_023536234.1 (uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.4 bits (625), Expect = 3.7e-61
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEPF+RCGIDSPPLWRLSP ASPISY Q+ AS+R S      SDRFAS
Sbjct: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNR-SFRDDQKSDRFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE----AAEKMDVLWENFNEELSRSRRSRLMKSVEMES 120
           +RF+ASLQRRRRFSSDAA DGEEE    AAEKMDVLWENFNEELSRS RSRLMK+ EM  
Sbjct: 61  VRFSASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEM-- 120

Query: 121 VEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQTRS 173
            EEIEIVKARRRMA LNLSETSGAV T RK TG    VK LKKLFL+HNNSRRNLQTRS
Sbjct: 121 -EEIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 175

[Close]

BLAST of Spg018109 vs. NCBI nr
Match: XP_022976943.1 (uncharacterized protein LOC111477161 [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 6.3e-61
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEP+SRCGIDSPPLWRLSPAASPISY Q+ AS+R S      SD FAS
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPAASPISYRQRTASNR-SFRDDQKSDGFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE---AAEKMDVLWENFNEELSRSRRSRLMKSVEMESV 120
           +RF+ASLQRRRRFSSDAA DGEEE   AAEKMDVLWENFNEELSRS RSRLMK+ EM   
Sbjct: 61  VRFSASLQRRRRFSSDAAMDGEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEM--- 120

Query: 121 EEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQTRSR 174
           EEIEIVK RRRM  LNLSETSGAVAT RK TG    VK LKKLFL+HNNSRRNLQTRSR
Sbjct: 121 EEIEIVKTRRRMTELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNNSRRNLQTRSR 175

[Close]

BLAST of Spg018109 vs. NCBI nr
Match: KAG7025087.1 (hypothetical protein SDJN02_13910, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.2 bits (622), Expect = 8.3e-61
Identity = 144/185 (77.84%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEP+SRCGIDSPPLWRLSP ASPISY Q+ AS+R S      SDRFAS
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPTASPISYRQKTASNR-SFRDDQKSDRFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE---------AAEKMDVLWENFNEELSRSRRSRLMKS 120
           +RF+ASLQRRRRFSSDAA DGEEE         AAEKMDVLWENFNEELSRS RSRLMK+
Sbjct: 61  VRFSASLQRRRRFSSDAAIDGEEEEEEVAEEEVAAEKMDVLWENFNEELSRSGRSRLMKT 120

Query: 121 VEMESVEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNL 174
            EM   EEIEIVKARRRMA LNLSETSGAVAT RK TG    VK LKKLFL+HN SRRNL
Sbjct: 121 AEM---EEIEIVKARRRMAELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNKSRRNL 180

[Close]

BLAST of Spg018109 vs. NCBI nr
Match: KAG6592229.1 (Histidinol-phosphate aminotransferase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.2 bits (622), Expect = 8.3e-61
Identity = 144/185 (77.84%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEP+SRCGIDSPPLWRLSP ASPISY Q+ AS+R S      SDRFAS
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPTASPISYRQKTASNR-SFRDDQKSDRFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE---------AAEKMDVLWENFNEELSRSRRSRLMKS 120
           +RF+ASLQRRRRFSSDAA DGEEE         AAEKMDVLWENFNEELSRS RSRLMK+
Sbjct: 61  VRFSASLQRRRRFSSDAAIDGEEEEEEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKT 120

Query: 121 VEMESVEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNL 174
            EM   EEIEIVKARRRMA LNLSETSGAVAT RK TG    VK LKKLFL+HN SRRNL
Sbjct: 121 AEM---EEIEIVKARRRMAELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNKSRRNL 180

[Close]

BLAST of Spg018109 vs. NCBI nr
Match: XP_022932537.1 (uncharacterized protein LOC111439032 [Cucurbita moschata])

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60
Identity = 143/180 (79.44%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEP+SRCGIDSPPLWRLSP ASPISY Q+ AS+R S      SDRFAS
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPTASPISYRQKTASNR-SFRDDQKSDRFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE----AAEKMDVLWENFNEELSRSRRSRLMKSVEMES 120
           +RF+ASLQRRRRFSSDAA DGEEE    AAEKMDVLWENFNEELSRS RSRLMK+ EM  
Sbjct: 61  VRFSASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEM-- 120

Query: 121 VEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQTRSR 174
            EEIEIVKARRRMA LNLSETS AVAT RK TG    VK LKKLFL+HN SRRNLQTRSR
Sbjct: 121 -EEIEIVKARRRMAELNLSETSSAVATRRKATGKTAFVKALKKLFLLHNKSRRNLQTRSR 176

[Close]

BLAST of Spg018109 vs. ExPASy TrEMBL
Match: A0A6J1INL4 (uncharacterized protein LOC111477161 OS=Cucurbita maxima OX=3661 GN=LOC111477161 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 3.1e-61
Identity = 143/179 (79.89%), Postives = 150/179 (83.80%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEP+SRCGIDSPPLWRLSPAASPISY Q+ AS+R S      SD FAS
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPAASPISYRQRTASNR-SFRDDQKSDGFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE---AAEKMDVLWENFNEELSRSRRSRLMKSVEMESV 120
           +RF+ASLQRRRRFSSDAA DGEEE   AAEKMDVLWENFNEELSRS RSRLMK+ EM   
Sbjct: 61  VRFSASLQRRRRFSSDAAMDGEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEM--- 120

Query: 121 EEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQTRSR 174
           EEIEIVK RRRM  LNLSETSGAVAT RK TG    VK LKKLFL+HNNSRRNLQTRSR
Sbjct: 121 EEIEIVKTRRRMTELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNNSRRNLQTRSR 175

[Close]

BLAST of Spg018109 vs. ExPASy TrEMBL
Match: A0A6J1EX19 (uncharacterized protein LOC111439032 OS=Cucurbita moschata OX=3662 GN=LOC111439032 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 5.2e-61
Identity = 143/180 (79.44%), Postives = 150/180 (83.33%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEP+SRCGIDSPPLWRLSP ASPISY Q+ AS+R S      SDRFAS
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPTASPISYRQKTASNR-SFRDDQKSDRFAS 60

Query: 61  LRFTASLQRRRRFSSDAAADGEEE----AAEKMDVLWENFNEELSRSRRSRLMKSVEMES 120
           +RF+ASLQRRRRFSSDAA DGEEE    AAEKMDVLWENFNEELSRS RSRLMK+ EM  
Sbjct: 61  VRFSASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEM-- 120

Query: 121 VEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQTRSR 174
            EEIEIVKARRRMA LNLSETS AVAT RK TG    VK LKKLFL+HN SRRNLQTRSR
Sbjct: 121 -EEIEIVKARRRMAELNLSETSSAVATRRKATGKTAFVKALKKLFLLHNKSRRNLQTRSR 176

[Close]

BLAST of Spg018109 vs. ExPASy TrEMBL
Match: A0A5A7V6B2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00190 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.6e-54
Identity = 135/183 (73.77%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEPF+RCGIDSPPLWRLSP+ASPISY QQ + DR     A  SD   S
Sbjct: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPSASPISYRQQISCDRNFRDTA--SDGEIS 60

Query: 61  LRF-TASLQRRRRFSSDAAADGEEE------AAEKMDVLWENFNEELSRSRRSRLMKSVE 120
            RF +AS QRRRRF SDAA +GEEE       AEKMDVLWENFNEELSRSRRSRLMK+ E
Sbjct: 61  NRFPSASFQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSRLMKTAE 120

Query: 121 MESVEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQT 174
           +   EE EIVKAR+RMA LNL ETSGA+AT RK TG    VKVLKKLFLMH+NSRRNLQT
Sbjct: 121 L---EENEIVKARQRMAELNLPETSGAMATRRKATGKTAFVKVLKKLFLMHSNSRRNLQT 178

[Close]

BLAST of Spg018109 vs. ExPASy TrEMBL
Match: A0A1S4E3Y6 (uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 8.1e-54
Identity = 133/182 (73.08%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEPF+RCG+DSPPLWRLSP+ASPISY QQ + DR     A  SD   S
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTA--SDGEIS 60

Query: 61  LRF-TASLQRRRRFSSDAAADGEEE-----AAEKMDVLWENFNEELSRSRRSRLMKSVEM 120
            RF +AS QRRRRF SDAA +GEEE      AEKMDVLWENFNEELSRSRRSRLMK+ E+
Sbjct: 61  NRFPSASFQRRRRFLSDAAVNGEEEEEEEAVAEKMDVLWENFNEELSRSRRSRLMKTAEL 120

Query: 121 ESVEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQTR 174
              EE EIVKAR+RMA LNL ETSGA+AT RK TG    VKVLKKLFLMH++SRRNLQTR
Sbjct: 121 ---EENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQTR 177

[Close]

BLAST of Spg018109 vs. ExPASy TrEMBL
Match: A0A1S3CEP4 (uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 133/183 (72.68%), Postives = 145/183 (79.23%), Query Frame = 0


Query: 1   MAVEDDFSFPTALEPFSRCGIDSPPLWRLSPAASPISYCQQAASDRQSTPPADNSDRFAS 60
           MAVEDDFSFPTALEPF+RCG+DSPPLWRLSP+ASPISY QQ + DR     A  SD   S
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTA--SDGEIS 60

Query: 61  LRF-TASLQRRRRFSSDAAADGEEE------AAEKMDVLWENFNEELSRSRRSRLMKSVE 120
            RF +AS QRRRRF SDAA +GEEE       AEKMDVLWENFNEELSRSRRSRLMK+ E
Sbjct: 61  NRFPSASFQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSRLMKTAE 120

Query: 121 MESVEEIEIVKARRRMAGLNLSETSGAVATTRKTTG---IVKVLKKLFLMHNNSRRNLQT 174
           +   EE EIVKAR+RMA LNL ETSGA+AT RK TG    VKVLKKLFLMH++SRRNLQT
Sbjct: 121 L---EENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNLQT 178

The following BLAST results are available for this feature:

BLAST of Spg018109 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536234.1	3.7e-61	79.89	uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo]	[more]
XP_022976943.1	6.3e-61	79.89	uncharacterized protein LOC111477161 [Cucurbita maxima]	[more]
KAG7025087.1	8.3e-61	77.84	hypothetical protein SDJN02_13910, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6592229.1	8.3e-61	77.84	Histidinol-phosphate aminotransferase 2, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022932537.1	1.1e-60	79.44	uncharacterized protein LOC111439032 [Cucurbita moschata]	[more]

BLAST of Spg018109 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg018109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1INL4	3.1e-61	79.89	uncharacterized protein LOC111477161 OS=Cucurbita maxima OX=3661 GN=LOC111477161...	[more]
A0A6J1EX19	5.2e-61	79.44	uncharacterized protein LOC111439032 OS=Cucurbita moschata OX=3662 GN=LOC1114390...	[more]
A0A5A7V6B2	1.6e-54	73.77	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4E3Y6	8.1e-54	73.08	uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CEP4	1.1e-53	72.68	uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Spg018109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34666	EXPRESSED PROTEIN	coord: 3..171
None	No IPR available	PANTHER	PTHR34666:SF7	SUBFAMILY NOT NAMED	coord: 3..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg018109.1	Spg018109.1	mRNA