Spg017990 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTGGGGACAGAGATGCGAATGGGTGCATGACTATTGGTTAGAAACAAAAACGGCAGTGCAGAACAGCCTCGCTATAGCGTCGTCTGGGCAACGAGTGATGTCGGATTCTACCCAACAAGTTCAATTAAGCATCAATAATACGTTGTTTGAGAATGAAGTCTTGATGTTTACAGATGCCTCATGCTCTCCATTGGTCCTGGGATCGGGATATGGGGTTATTGTTTTTCAGGCAAATAATCAACTTTGTGGTGCTATGGAAGTTTTCGAACCAACACGTCATAAGCCACTAGCGGCTGAAGTGAATGCACTATTACATGGCCTTCGTTTGTTACACACAATGCAGGTCCGTCGTGCGCGTGTTTTATCAGATTCATCCATTGCAATCAAGATGATTCAGAATGACATTAATATCACCTCTGATGTGTATCATTGGATTTTAAAAATCCAAGATATGTGTGCACTATTTGAGTCAGTATCTTTCCATTATGTGTCTCGACAATGTAATAGGAAGGCAGACTATCTAGCAAAGCATGCTCTTTCTCATGGTAGCTCTACGCTTTGGGTAGGAAACTATCCACAAGAGCTTGTATCAATGAGTAATTTTACTCATTGCAACTGTAATGTTTTGTGTAATTGTGTGATGGAATGAAATGACTTCGATTTTGTTATAAAAAAAAAAAATGAGAGACTAAATTAAAATTTTGTAAATATTAAAATAAAATTTAATAAATAAAAAAGCATAAACGTGCATCACACGTGGTGAAAAACTAGTCAATCCAAATGAATGGTTAAGTTGTATCGAATTAGATTGGTCAAACGTTGACTTTAGGTCGGGCTTAGATCAGGCTCGAGTTGAGCATGAGCGGGCCTTTAGGCCACAAACTCGATGATGAGGCTGATTGCCAACATCATAACTCAACTAAAACATTGTAATCTCAACCAGGAGGTTTGTGGTTAAAATCTCTATCTCCACTTACTTTTTTATTTTTTTTATTTTTTAAGCTTTCATTGTACGCATTCATGCATTAAAAAAGACTTTAGAATTCTTCCAAAACTCACTAATTTCAACTAAGTCGAGTCCTAACAAATCAATGTGCAAAATTAAGTCTATACAAGTAAGCATACAAGATCCACCATTATTGACTCACAAATTTAACAAAAATCTAACTCTAATATCATTTTTTATCCATCAATTTCTTACTAAGTTCCAATTTTCTTTTCATATTCCATTAAAGACGTATGGGAAATTTATTTCAAAATCCTTAAAAGAAAATAAAAAGTTAAGTAAAATGGGATACATTCAACCTTAGACCAACACGAGCATAGTTAACTAAAAGTATTTAATAGGCCAAGAGATCACGGTTCAAATCCTGAGTAATGACCAACAAGAGCATGGCTCAATTGGCATAAAACTTGTATTCCGACCAAGACATCCCCACCACGGATTTTTTTTATTAATAATGTACTTTAATAAAAAAAAAAAAAATTTAGAGGCGTTCTAAAAGTAATTCCAAAAATAGGGTAGCTAAATCGTGTACGTCGGCCGCGATTTCAATAAGTCGTGGGCCGTGGTCACGATTCCGAGGGTAACTCGCGTACCTGGTACGCGACTTTCTTGTTGGCACGCTGACGAGGCATACATCACCAGGTTGGCGATGATTTGGCGCTGACGTCGCGCCAGCGAACTCGTGTACCTGGTACACGATTTTGTTAAGTAAATCGTGTACCAGGTACACGATTTTGTGGTCCATGAAACCCTACCCCACTCGTGAAGCGCAAACCCAGATACCCCCCTCGGTTTTTTCTCCCTTCCTCCGTTTTTAGCTTCGTCCGCCGCCGTTCCAAGTGCCGTCGCCGCCGTTCCGCCGACCTGTGACCTCGCCGCCGCCTGGGTTCCACGCCGTTCAGTTCGCCGCCGCCTAGGTATGTATATATATTTTTTTTTCTTTTTTTCATATAAAAACATTATTTTAGTGATAGATTTTTAGTTTATGGATTATTTTAGTGATAGATTTTTAGTTTGTGGACTGTTTTAGTGCTTTGTATGTTTATGGATTATTTGGAACCGATTTGGATTGTTTTTGGATTGTTTTGGGTCGTTTTTGGACTGATTTGGATCGTTTTTTGACTGATTTGGGTTGTTTGAGTTTTGGACTTAGATATATATTGCTTTAGGTATATTTTGAACCCACTTGGGTTGTTTTTGGATTGATTTGGGTCGTTTTTGGACTGATTTGGGTCGTTTTTGGACTGATTTGGGCTGTTTGATTTGTAGTGGACTTTGTTTGTAATGGATTTTGATTGTAATGGATTATGTTTTCTTTGTAATGAATATTGATTTGTAGTGGACTTTGTTTGTAATGGATTTTGATTGTAATGGATTATGTTTTCTTTGTAATGAATCTTGATTTGTAGTGGACTTTGTTTGTAATGGATTTTTTTTTGTAATGGACTTTGTAATGGATTATGTTTTCTTTGTAATGAATCTTGTTCTATTAGTTGCTAATGGACTTATGTGTTTTTAAATGTTCAGTATAAATATGGAACCTGGCCAATTAACCAAAGACAATTATATTTACAACGTACGCACCGTTCATAGTCGATATGGGATGATCAATCCACTACTATCTTATAATGTCGAAGAAGAGAGGCAGTGGTTAACAGAAATATCAATATAGATCAACGCATCGTGCCTTACGTACAACAAGCCGGATTTTGGGGGGTTGCGCAGATTGGGTTCATGCAACTAAATTGGCATCTTATTACTGCGTTAGTTGAGCGATGGAGGCCAGAAACCCATACATTTCATATGCCTTGTGGAGAGTGTACTGTTACACTCCAAGATGTTGCAGTGCAATTCGAATTACCTATAGATGGAGAACCTGTAACTGGCTCATTGCAATATAATTAGGGTCAGGTATGTGAAGATTTTTTGGGAGTTCGACCACCTGAATTGCATGGATCTAGATTAAGCATTCCATGGTTGGCAGCACAGTTTGCAGAATTGCCCCCCAATGCCGACGAGATCACAATACAGAGGCATGCGAGAGCCTTTATTATGCAATTGATTGGAGGGTTTCTATTTGCTGACAAGTCCAACACACTTGTTCATCTCATGTTTCTTTCACTTTTAGAAAACTTCGAGATAGCTGGACAATATTCTTGGGGTAGTGCATGTCTTGCATGGTTGTATAGAGAATTATGTCGAGCTAGTGGTGCCAGTGCATTAGAGATTGCCGGTCCACTAATACTACTACAAGTTTGGGCGTTCGATCGATTTTCTATTGTCGCACCACTACACGACTTGCCGACCCCTGGAAATTATGCTGGACGCCCACTTAGTGCTCGGTATGTTAAATTTACGTATAATTTAAATTTATCATAAATTTGTATAATAGTATGCTTTAATTGTATTGTACAATGTGTAGATGGAATGGAATTTTGGCTGCATCTGAGCAAACTACAAATTTGTTGATCATGTATCGTATTACATTTGATTGTCTTATGCCCAACTAGGTAAAACAGTAATCAAATTTTTTCTTATTTTAAAAAAGTATACATTAACTTTATTTTCATTTAATAAATTTATCGTTTTATAAATTTCAGATCACATGGACACCATACACACCTGAGATTATGGCCTTACTACCAGACTATTGTCGCACTGGACGAGAGATTTGGTTGACTGTAAGCCCTCTCATATGTTTTCATATTGTAGAGTGACATTACCCAAATCGAGTGCTAAGACAATTTGGAATGCGACAAATGATGCCGCCATATTGCGATACAGTTATAGAGTTACATCAGTTAGACTTGCGAGGTAAGCACGATCACGATTGGCGACATCATCATGCATCCTATATATCACTGTGGCGTGCACGTCGTGATCATTGTGTCCTGGGCGACATAGTAGACATGCCAGTCGTGTCTGATGACTACTTACACTGGTATGATTCAATCACAAGGAGGTATATCACGCGTGAGGGTGCTTATTATGCTTGCACGGTAAATAGTATATACTTTGATTTTGTAATTATTGAATTTCAGTTACAAATATTTTTTTTATTTTAATTATTTTCTTCTTACAGAATAACTTTGTTCGAGATGTACAACATTTTTCTGTGGAACAAAATATACCACAGTTAGGTTCTATGTGTGAGCAATACGTCACGAACATAACTGATATCATCCAACAAACTAGGAGGCTTACCGTTGTTGACACTGATTGGACACGTGCTCGTCGTAGACGCCGTCGACAACAGGCTGCAGACATTCCACAGCAGAATGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTTAGCTCATCAAGTTCAGTCACTAGCAGATCAGACAGACATTGCTTCAAGTTCTGGTCATGGTGACATAACTCAACAAGATATTGATGATGTGATTCATCATCAATCACACATGGAAGCGGCTCAACCTCGTCGTGGAGCTCGTCAGAGAAGACCACGCCGCTGTGGCACTTAG ATGGAGTGGGGACAGAGATGCGAATGGGTGCATGACTATTGGTTAGAAACAAAAACGGCAGTGCAGAACAGCCTCGCTATAGCGTCGTCTGGGCAACGAGTGATGTCGGATTCTACCCAACAAGTTCAATTAAGCATCAATAATACGTTGTTTGAGAATGAAGTCTTGATGTTTACAGATGCCTCATGCTCTCCATTGGTCCTGGGATCGGGATATGGGGTTATTGTTTTTCAGGCAAATAATCAACTTTGTGGTGCTATGGAAGTTTTCGAACCAACACGTCATAAGCCACTAGCGGCTGAAGTGAATGCACTATTACATGGCCTTCGTTTGTTACACACAATGCAGGTCCGTCGTGCGCGTGTTTTATCAGATTCATCCATTGCAATCAAGATGATTCAGAATGACATTAATATCACCTCTGATGTGTATCATTGGATTTTAAAAATCCAAGATATGTGTGCACTATTTGAGTCAGTATCTTTCCATTATGTGTCTCGACAATGTAATAGGAAGGCAGACTATCTAGCAAAGCATGCTCTTTCTCATGGTAGCTCTACGCTTTGGGTTGGCGATGATTTGGCGCTGACGTCGCGCCAGCGAACTCGTGTACCTGCTTCGTCCGCCGCCGTTCCAAGTGCCGTCGCCGCCGTTCCGCCGACCTGTGACCTCGCCGCCGCCTGGGTTCCACGCCGTTCAGTTCGCCGCCGCCTAGGTTCTATGTGTGAGCAATACGTCACGAACATAACTGATATCATCCAACAAACTAGGAGGCTTACCGTTGTTGACACTGATTGGACACGTGCTCGTCGTAGACGCCGTCGACAACAGGCTGCAGACATTCCACAGCAGAATGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTTAGCTCATCAAGTTCAGTCACTAGCAGATCAGACAGACATTGCTTCAAGTTCTGGTCATGGTGACATAACTCAACAAGATATTGATGATGTGATTCATCATCAATCACACATGGAAGCGGCTCAACCTCGTCGTGGAGCTCGTCAGAGAAGACCACGCCGCTGTGGCACTTAG ATGGAGTGGGGACAGAGATGCGAATGGGTGCATGACTATTGGTTAGAAACAAAAACGGCAGTGCAGAACAGCCTCGCTATAGCGTCGTCTGGGCAACGAGTGATGTCGGATTCTACCCAACAAGTTCAATTAAGCATCAATAATACGTTGTTTGAGAATGAAGTCTTGATGTTTACAGATGCCTCATGCTCTCCATTGGTCCTGGGATCGGGATATGGGGTTATTGTTTTTCAGGCAAATAATCAACTTTGTGGTGCTATGGAAGTTTTCGAACCAACACGTCATAAGCCACTAGCGGCTGAAGTGAATGCACTATTACATGGCCTTCGTTTGTTACACACAATGCAGGTCCGTCGTGCGCGTGTTTTATCAGATTCATCCATTGCAATCAAGATGATTCAGAATGACATTAATATCACCTCTGATGTGTATCATTGGATTTTAAAAATCCAAGATATGTGTGCACTATTTGAGTCAGTATCTTTCCATTATGTGTCTCGACAATGTAATAGGAAGGCAGACTATCTAGCAAAGCATGCTCTTTCTCATGGTAGCTCTACGCTTTGGGTTGGCGATGATTTGGCGCTGACGTCGCGCCAGCGAACTCGTGTACCTGCTTCGTCCGCCGCCGTTCCAAGTGCCGTCGCCGCCGTTCCGCCGACCTGTGACCTCGCCGCCGCCTGGGTTCCACGCCGTTCAGTTCGCCGCCGCCTAGGTTCTATGTGTGAGCAATACGTCACGAACATAACTGATATCATCCAACAAACTAGGAGGCTTACCGTTGTTGACACTGATTGGACACGTGCTCGTCGTAGACGCCGTCGACAACAGGCTGCAGACATTCCACAGCAGAATGAAGATGAAGAACCTCCTATAGTTGATGATGACACTTTAGCTCATCAAGTTCAGTCACTAGCAGATCAGACAGACATTGCTTCAAGTTCTGGTCATGGTGACATAACTCAACAAGATATTGATGATGTGATTCATCATCAATCACACATGGAAGCGGCTCAACCTCGTCGTGGAGCTCGTCAGAGAAGACCACGCCGCTGTGGCACTTAG MEWGQRCEWVHDYWLETKTAVQNSLAIASSGQRVMSDSTQQVQLSINNTLFENEVLMFTDASCSPLVLGSGYGVIVFQANNQLCGAMEVFEPTRHKPLAAEVNALLHGLRLLHTMQVRRARVLSDSSIAIKMIQNDINITSDVYHWILKIQDMCALFESVSFHYVSRQCNRKADYLAKHALSHGSSTLWVGDDLALTSRQRTRVPASSAAVPSAVAAVPPTCDLAAAWVPRRSVRRRLGSMCEQYVTNITDIIQQTRRLTVVDTDWTRARRRRRRQQAADIPQQNEDEEPPIVDDDTLAHQVQSLADQTDIASSSGHGDITQQDIDDVIHHQSHMEAAQPRRGARQRRPRRCGT Homology
BLAST of Spg017990 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 79.3 bits (194), Expect = 7.2e-11 Identity = 53/182 (29.12%), Postives = 93/182 (51.10%), Query Frame = 0
BLAST of Spg017990 vs. NCBI nr
Match: KAF3572023.1 (hypothetical protein F2Q69_00063094 [Brassica cretica]) HSP 1 Score: 64.3 bits (155), Expect = 2.4e-06 Identity = 43/128 (33.59%), Postives = 73/128 (57.03%), Query Frame = 0
BLAST of Spg017990 vs. NCBI nr
Match: KAG5395350.1 (hypothetical protein IGI04_025313 [Brassica rapa subsp. trilocularis]) HSP 1 Score: 63.9 bits (154), Expect = 3.1e-06 Identity = 52/172 (30.23%), Postives = 81/172 (47.09%), Query Frame = 0
BLAST of Spg017990 vs. NCBI nr
Match: KAF3526751.1 (hypothetical protein F2Q69_00048373 [Brassica cretica]) HSP 1 Score: 62.8 bits (151), Expect = 7.0e-06 Identity = 42/128 (32.81%), Postives = 73/128 (57.03%), Query Frame = 0
BLAST of Spg017990 vs. NCBI nr
Match: GAY61101.1 (hypothetical protein CUMW_207140, partial [Citrus unshiu]) HSP 1 Score: 62.4 bits (150), Expect = 9.1e-06 Identity = 50/191 (26.18%), Postives = 84/191 (43.98%), Query Frame = 0
BLAST of Spg017990 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 3.5e-11 Identity = 53/182 (29.12%), Postives = 93/182 (51.10%), Query Frame = 0
BLAST of Spg017990 vs. ExPASy TrEMBL
Match: A0A2H5Q972 (Uncharacterized protein (Fragment) OS=Citrus unshiu OX=55188 GN=CUMW_207140 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 4.4e-06 Identity = 50/191 (26.18%), Postives = 84/191 (43.98%), Query Frame = 0
BLAST of Spg017990 vs. ExPASy TrEMBL
Match: A0A5B6UDX5 (Reverse transcriptase OS=Gossypium australe OX=47621 GN=EPI10_018998 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 9.8e-06 Identity = 54/213 (25.35%), Postives = 94/213 (44.13%), Query Frame = 0
BLAST of Spg017990 vs. ExPASy TrEMBL
Match: A0A6P6UCV9 (Ribonuclease H OS=Coffea arabica OX=13443 GN=LOC113709995 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.3e-05 Identity = 51/186 (27.42%), Postives = 86/186 (46.24%), Query Frame = 0
BLAST of Spg017990 vs. ExPASy TrEMBL
Match: A0A6P6U043 (Ribonuclease H OS=Coffea arabica OX=13443 GN=LOC113705791 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.9e-05 Identity = 41/129 (31.78%), Postives = 66/129 (51.16%), Query Frame = 0
BLAST of Spg017990 vs. TAIR 10
Match: AT1G10000.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 47.0 bits (110), Expect = 3.7e-05 Identity = 49/175 (28.00%), Postives = 88/175 (50.29%), Query Frame = 0
BLAST of Spg017990 vs. TAIR 10
Match: AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 44.7 bits (104), Expect = 1.8e-04 Identity = 36/129 (27.91%), Postives = 59/129 (45.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|