Spg017790 (gene) Sponge gourd (cylindrica) v1

Overview
NameSpg017790
Typegene
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1-like
Locationscaffold9: 34717865 .. 34721315 (-)
RNA-Seq ExpressionSpg017790
SyntenySpg017790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCTACCTCTCTCTTTAGGACGATTTGAAGTCATATTGTCATATTCCAATTGGAATTCTCCTAAAAACCCTAAATCAACGATCTTTATTCTTCGTCTCCACCGACTTATCGATCTTCTTCGGCAACGGAAGAAAAGTTCAGCCGCCGGCCAAATTTCTCATGGCGTCCAAATCCAAGAGCGAAAATCCTCACACCGGTGATGGCGCTAGCCCCGGGTTTGTGTCTTTTCCTTTCTCAATTTGTTTGCTTTCGGTCTTTCTCTGAGGGAAGTTTGACGAGTTGGGGCAAAGGGATTTCGTTTATCTCTGGATTTTATAAGATCCAGATTCCAATTACTATATGTTATTCCCCTTTTAGGCCCGCCAAACGGTTTCTCTGTCTTGATTTTCTTTGGATCTCGATTTTGTGTTCTCACTTTTTTGCTAATTTTGCTTTCGCAGGAAGATTTTCATCGGAGGATTGGCAAAAGATACGACTTACAGTGAGTTTCTGTTTTATTTAATTATGATATATTTTCGTAGGATCCGAGTTTCTGTAACTATGTTTAATTCTGCTGTTAATACATGTTTTTCTTGATGGGTGTTCTTTTTTGTATGGCTAGTTTAGCACCTTTCCTTTTGTTTATACTTCATCTAGATCTGTTGAAAACCATTGATAATTAAACGAATTCTTGATTAAGTGCAATATTAGTTTAGATCTGACTGCAGTTGACGTCCTTTTTTCATTGTGTTATTTGACAAACCAGCTCAATTCAACAAACATTTTGGGAAATATGGAGAGATAACAGATTCGGTGATCATGAAAGATCGGTATACGGGACAACCAAGAGGTTTTGGGTTTATCACGTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGGAAACAAGTGCGTGATTCTATTTATTTTGTTTTTCTTCTTCCTGCTAACTGGCTTACACAACATTTTATTCCACTGGATTGTTAAATGGCGTTAAAGTTTTTTTTTTTTTTTTTTCTTTCTTCCCATGGTTTTTTAAGGTTAATCATGAGTCATTTTCCGATTTCTGTTGTAATATAATCTGTTGTTGCATGAACTTAGGCTTTATTTGTTTTCTTTCTTCTATTTCTGGGTCTTACTTTGCTAAATGGAATTAGGTTGAAATTAAGAGAACCATCCCTAAAGGACAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATTTTTGTTGGTGGAATTCCATCAACGGTTACTGAAGGTAGGGTTATTGAGTTATATGTTGCAGTGTGTTTCTTATTGGTGGTACCAGTATTTTTTTCCAGCCAGTGTTTATTTTTTCTTCTTAAAGTGTTGGAGTCTCTATGTTGTGTGTTTTAATCTGTTTATTTCATGTCTTGCTTGTAGATGAGTTTAAACATTTCTTTTCCAAGCATGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGATTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGAGCTCATATAAATGGACTGCAAGCGAGCAAAGTGTAAACCGAATTGTGTTTCGCATGGATTTTGCTCCATCATATTCTCCATTTTTAATAATAATGGACGATTATCAACATTTTCACATTACACTAATGTATCTTTTAAGCATTGTGCCATTAGCTACTTCTTTTTGCTACTAATTTTAGGTGGAGGTTATTACAGGTATAGATCTTCTAAGGCAAGGGCTATCAGAATAGTTAAATTGCAGAAGATCTAGGTTAACTAAGTTACTTTGTTGTAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCTTATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGCGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACCGCAGGTGGTATTGGTGGTAGGATTGGGAGTGGCTATGGTTATGGTGGAGGAGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTTGGTTATTCTAGTCGATTTGGACCTTACAGTGGTGGGTTTGGTGGGGGATATGGCACGAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTATGGTGGAGGTTACGACTCTGGTCCTGGTGCTAGTTATGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCTTATGCAAGGTAGAATCATTGCATAGTCAGTACCGTCCATCCCTTTGCAAGCTAGAAAAGAAGTCTCACTCCAATGCTGTCTCGCTAAGATTTGCCATAGAGTCTTCAAACACAGGTTCCTATAGTTTTGTGGCCCAGTGATAGGCGCTTCTCACAAATACTAGAGGTCCCAAGGAAGCTTTTGAAAGACCAGAAGAGTGTATTAGACATTTTATTGTATGGTTTTAGACACTATTATGTAGACTACTGCTGCAAGCTAGTTTGTGCCTAATATGGTTGTCCTGATCTAGTACAATTTCAATGTAGTGTGCTGTGGTGTAGGCTTTAGCATATACTTTTTCTTGGTTTTGTTTATTCCTCATTAGTTTGATATCTAGATAGAGATATGCTATGTTCTATAAATATGCCCTAGTCTTCTACTCTTATTTTAGTTTGTGGATGATAGACTTTTGGTAGGAAAAAAGAAAAAATTCTTCCAGTTCTACTGATTTAAATCAGATGGAGGATTGTTGTTTTAGGGGAGGGATCAGGATATCTAGAATGGGAATCATCACTTGTATTTGATATGTTGATTCTGCTAGCTGAGAAGCTCCCCTTTAAGAAGAGGATACATGTTGATTGGAAAGATCTTGCATTTTTGGTATTGAGATCAATTTATATGTGGTATAAAGTTATCTTTTTCTTTTTAATAAATTATCCTATTAACTGGTATGATGGATTTTGTTATTATCCTGTCTGTGTATGGTTTCATAGATTTGGAAATAAAAATTTGAAAAACTGGAAATAACTTGCTTTTGAGTGAAGTTGATGAATGCTACACTCTACAACAAATGCTATTGACTGATCTGCTGAAGCTGAACTGGTGGTGGTTGCCTTCCATTTGGATTTCTTGAGTGCCTTGAAGCTATTCTAGTTCTTTCTTTCATGCTATATCTGCAATTTTGTAGATTATTTTAGGGTCTTCATCTATTTATCCCAAAATTGGTGGTATTTTTTTTTTTTATTGGTGAATAACACAAGATAAGTTTCAATGCAGCTTTAGTCTTTGTAATTTCTCTCTTAATTTGTTTCAATACTGAAGTTTATTTGTTAATGTAGT

mRNA sequence

ATGGCGTCCAAATCCAAGAGCGAAAATCCTCACACCGGTGATGGCGCTAGCCCCGGGAAGATTTTCATCGGAGGATTGGCAAAAGATACGACTTACACTCAATTCAACAAACATTTTGGGAAATATGGAGAGATAACAGATTCGGTGATCATGAAAGATCGGTATACGGGACAACCAAGAGGTTTTGGGTTTATCACGTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGGAAACAAGTTGAAATTAAGAGAACCATCCCTAAAGGACAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATTTTTGTTGGTGGAATTCCATCAACGGTTACTGAAGATGAGTTTAAACATTTCTTTTCCAAGCATGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGATTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCTTATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGCGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACCGCAGGTGGTATTGGTGGTAGGATTGGGAGTGGCTATGGTTATGGTGGAGGAGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTTGGTTATTCTAGTCGATTTGGACCTTACAGTGGTGGGTTTGGTGGGGGATATGGCACGAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTATGGTGGAGGTTACGACTCTGGTCCTGGTGCTAGTTATGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCTTATGCAAGGTAG

Coding sequence (CDS)

ATGGCGTCCAAATCCAAGAGCGAAAATCCTCACACCGGTGATGGCGCTAGCCCCGGGAAGATTTTCATCGGAGGATTGGCAAAAGATACGACTTACACTCAATTCAACAAACATTTTGGGAAATATGGAGAGATAACAGATTCGGTGATCATGAAAGATCGGTATACGGGACAACCAAGAGGTTTTGGGTTTATCACGTATGCTGATCCTTCTGTGGTTGACAAGGTTATCGAAGATACACACGTCATCAATGGGAAACAAGTTGAAATTAAGAGAACCATCCCTAAAGGACAAGGTCAATCAAAGGATTTTAAGACGAAGAAGATTTTTGTTGGTGGAATTCCATCAACGGTTACTGAAGATGAGTTTAAACATTTCTTTTCCAAGCATGGGAAAGTTGTGGAACACCAAATTATACGTGACCATGAAACCAACCGTTCGCGAGGCTTTGGATTTATAGTTTTTGAGGAGGAAGAAGTTGTAGATGAAATTTTATCCAAAGGAAATATGATAGATATGTCTGGTACCCAGGTGGAGATCAAGAAAGCTGAACCAAAGAAATCCTCAAACCCACCACCTGCTCCTGCTTATGGTAGCAATTCTAGGGCTCGTTCATTCAATGATGGCTTTGGTGGATATGGCGGTTCTTATGGGGACTTTGATGCAGGCTTTGGACCTGGTCCCTTTAGGACCGCAGGTGGTATTGGTGGTAGGATTGGGAGTGGCTATGGTTATGGTGGAGGAGGTGACTTTGGTGGTGGTTATGGAGGTTTTGGAAGCAGTAGCTTAGGTGGCTACCGAGGTGAATCATCCCTTGGTTATTCTAGTCGATTTGGACCTTACAGTGGTGGGTTTGGTGGGGGATATGGCACGAGTGGCTTAGGAGGATATGGTCGAGGGGTTGATGGCTATGGGAGCTATGGAGGTTCAGGTTATGGTGGAGGTTACGACTCTGGTCCTGGTGCTAGTTATGGAGGAGCAGGTGGTTTGTATGGAAGGGGAGGCTATAGTGGGAGTAGTCGATACCATCCTTATGCAAGGTAG

Protein sequence

MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIGSGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Homology
[Close]
BLAST of Spg017790 vs. NCBI nr
Match: XP_022941092.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_022981531.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima] >KAG6607739.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 649.0 bits (1673), Expect = 2.2e-182
Identity = 340/347 (97.98%), Postives = 342/347 (98.56%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK GKVVEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYG GGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. NCBI nr
Match: XP_023525200.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181
Identity = 339/347 (97.69%), Postives = 341/347 (98.27%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK GKVVEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYG GGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGY GGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYSGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. NCBI nr
Match: KAG7037314.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 642.9 bits (1657), Expect = 1.6e-180
Identity = 340/352 (96.59%), Postives = 342/352 (97.16%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGT---- 180
           DE KHFFSK GKVVEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGT    
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEV 180

Query: 181 -QVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGI 240
            QVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGG+
Sbjct: 181 IQVEIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGL 240

Query: 241 GGRIGSGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG 300
           GGRIG GYGYG GGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG
Sbjct: 241 GGRIGGGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLG 300

Query: 301 GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 GYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 352

[Close]
BLAST of Spg017790 vs. NCBI nr
Match: XP_008463022.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa] >TYK08000.1 heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 336/347 (96.83%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSK+GK+VEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYG GGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. NCBI nr
Match: XP_004149406.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothetical protein Csa_015841 [Cucumis sativus])

HSP 1 Score: 641.0 bits (1652), Expect = 6.1e-180
Identity = 335/347 (96.54%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSK+GK+VEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFR  GGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYG GGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-39
Identity = 138/395 (34.94%), Postives = 202/395 (51.14%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF  YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 FKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKK 198
           F+ +F  +G V +  I+ D  TNR RGFGF+ F+ E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRI--- 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G  +   
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 -GSGYGYG-GGGDFGGGYGGFG--SSSLGGYRGESSLGYSSRFGPYSG------------ 318
             SGYG G G G  G GYG +G  + S GGY   ++ GY +   P +G            
Sbjct: 246 GSSGYGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNS 305

Query: 319 ------------GFGGGYGTSGLG------------GYGRGVDGYGSYGG--SGYG---- 345
                       G+G G   SG G            GY     GYG Y G  SGYG    
Sbjct: 306 WDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQAA 365

[Close]
BLAST of Spg017790 vs. ExPASy Swiss-Prot
Match: P21522 (Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americana OX=7009 GN=HNRNP PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.3e-31
Identity = 139/351 (39.60%), Postives = 186/351 (52.99%), Query Frame = 0 

Query: 8   ENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITY 67
           EN H G+     K+FIGGL   TT     +HF ++GEI D V+MKD  T + RGFGFITY
Sbjct: 7   ENDH-GEPEHVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITY 66

Query: 68  ADPSVVDKVIE-DTHVINGKQVEIKRTIPKGQ-GQSKDFKT-KKIFVGGIPSTVTEDEFK 127
           +   +VD       H ++G+ VE KR +P+ + G+ +   T KK+FVGGI   + E++ +
Sbjct: 67  SRAHMVDDAQNARPHKVDGRVVEPKRAVPRTEIGRPEAGATVKKLFVGGIKEEMEENDLR 126

Query: 128 HFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEI-LSKGNMIDMSGTQVEIKKA 187
            +F ++G VV   I+ D ET + RGF F+ F++ + VD+I LS+ + I   G  +++KKA
Sbjct: 127 DYFKQYGTVVSAAIVVDKETRKKRGFAFVEFDDYDPVDKICLSRNHQI--RGKHIDVKKA 186

Query: 188 EPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPG---------PFRTA-- 247
            PK  +        G   R        GG+GG  GD+    G G         P+     
Sbjct: 187 LPKGDA----PGGRGGGGRGGVGGGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRG 246

Query: 248 ------GGIGGRIGSGYGYGGGGDFGGG--YGGFGSSSLGGYRGESSLGYSSRFGPYSGG 307
                 GG GG +G G  +GGGG  GGG  YGG G  S GG+   S+ GY+S  GP S G
Sbjct: 247 GGGDRWGGGGGGMGGGDRWGGGGGMGGGDRYGGGGGRS-GGW---SNDGYNS--GPQSDG 306

Query: 308 FGGGYGTSGLGGYGRGVDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGG 336
           FGGGY  S  GG  RG  GYG    + Y    D G   S GG GG YG GG
Sbjct: 307 FGGGYKQSYGGGAVRGSSGYGGSRSAPYS---DRG---SRGGGGGGYGSGG 338

[Close]
BLAST of Spg017790 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.2e-30
Identity = 124/331 (37.46%), Postives = 169/331 (51.06%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF K+G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDEFKHFFSKHGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E   + +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ F++ + VD+I+ +     ++G   E+KKA  K+         
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ------ 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIGSGYGYGGGGDFGGGYG 259
             S    R    G G + G  G+F  G G G F   G  GGR   GYG GGGG   G YG
Sbjct: 216 --SAGSQRGRGGGSGNFMGRGGNF--GGGGGNFGRGGNFGGR--GGYG-GGGGGSRGSYG 275

Query: 260 GFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYGGGY 319
           G      GGY G         FG   G +GGG G S  GGYG G  GYG+ GG GYGGG 
Sbjct: 276 G----GDGGYNG---------FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGG-GYGGG- 333

Query: 320 DSGPGASYGG--AGGLYGRGGYSGSSRYHPY 346
               G  Y G   GG +G G Y G   Y+ +
Sbjct: 336 ----GGGYDGYNEGGNFGGGNYGGGGNYNDF 333

[Close]
BLAST of Spg017790 vs. ExPASy Swiss-Prot
Match: Q6URK4 (Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 3.2e-30
Identity = 124/331 (37.46%), Postives = 169/331 (51.06%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF K+G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDEFKHFFSKHGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E   + +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ F++ + VD+I+ +     ++G   E+KKA  K+         
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ------ 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIGSGYGYGGGGDFGGGYG 259
             S    R    G G + G  G+F  G G G F   G  GGR   GYG GGGG   G YG
Sbjct: 216 --SAGSQRGRGGGSGNFMGRGGNF--GGGGGNFGRGGNFGGR--GGYG-GGGGGSRGSYG 275

Query: 260 GFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGSGYGGGY 319
           G      GGY G         FG   G +GGG G S  GGYG G  GYG+ GG GYGGG 
Sbjct: 276 G----GDGGYNG---------FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGG-GYGGG- 333

Query: 320 DSGPGASYGG--AGGLYGRGGYSGSSRYHPY 346
               G  Y G   GG +G G Y G   Y+ +
Sbjct: 336 ----GGGYDGYNEGGNFGGGNYGGGGNYNDF 333

[Close]
BLAST of Spg017790 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 7.1e-30
Identity = 127/337 (37.69%), Postives = 171/337 (50.74%), Query Frame = 0 

Query: 20  KIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVI-E 79
           K+FIGGL+ +TT     +HF K+G +TD V+M+D  T + RGFGF+TY+    VD  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 80  DTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTVTEDEFKHFFSKHGKVVEH 139
             H ++G+ VE KR + +            KKIFVGGI     E   + +F K+GK+   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETI 155

Query: 140 QIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPPPAPA 199
           +++ D ++ + RGF F+ F++ + VD+I+ +     ++G   E+KKA  K+         
Sbjct: 156 EVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQ-KYHTINGHNCEVKKALSKQEMQ------ 215

Query: 200 YGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIGSGYGYGGGGDFGGGYG 259
             S    R    G G + G  G+F  G G G F   G  GGR   GYG GGGG   G YG
Sbjct: 216 --SAGSQRGRGGGSGNFMGRGGNF--GGGGGNFGRGGNFGGR--GGYG-GGGGGSRGSYG 275

Query: 260 GFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRGVDGYGSYGGS-GYGGG 319
           G      GGY G         FG   G +GGG G S  GGYG G  GYG+ GG  G GGG
Sbjct: 276 G----GDGGYNG---------FGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGG 335

Query: 320 YD------SGPGASYGGAGGLYGRGGYSG--SSRYHP 345
           YD      +  G +YGG G     G YSG   S Y P
Sbjct: 336 YDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGP 345

[Close]
BLAST of Spg017790 vs. ExPASy TrEMBL
Match: A0A6J1IWT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111480620 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.1e-182
Identity = 340/347 (97.98%), Postives = 342/347 (98.56%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK GKVVEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYG GGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. ExPASy TrEMBL
Match: A0A6J1FLG0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446490 PE=4 SV=1)

HSP 1 Score: 649.0 bits (1673), Expect = 1.1e-182
Identity = 340/347 (97.98%), Postives = 342/347 (98.56%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGDYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DE KHFFSK GKVVEHQIIRDHETNRSRGFGFIVF+EEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DELKHFFSKFGKVVEHQIIRDHETNRSRGFGFIVFDEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGG+GGRIG
Sbjct: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGLGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
            GYGYG GGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 GGYGYGSGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. ExPASy TrEMBL
Match: A0A5A7U1Z1 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001410 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 336/347 (96.83%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSK+GK+VEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYG GGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. ExPASy TrEMBL
Match: A0A1S3CI79 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103501266 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 336/347 (96.83%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSK+GK+VEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFR  GGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYG GGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. ExPASy TrEMBL
Match: A0A0A0K3W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1)

HSP 1 Score: 641.0 bits (1652), Expect = 2.9e-180
Identity = 335/347 (96.54%), Postives = 340/347 (97.98%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFG YGEITDSVIMKDRYTGQPR
Sbjct: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGNYGEITDSVIMKDRYTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120
           GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE
Sbjct: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTE 120

Query: 121 DEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180
           DEFKHFFSK+GK+VEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI
Sbjct: 121 DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEI 180

Query: 181 KKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIG 240
           KKAEPKKSSNP PAPAYGSNSRAR+FNDGFGGYGGSYGDFDAGFGPGPFR  GGIGGRIG
Sbjct: 181 KKAEPKKSSNPLPAPAYGSNSRARTFNDGFGGYGGSYGDFDAGFGPGPFRNPGGIGGRIG 240

Query: 241 SGYGYGGGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300
           SGYGYG GGDFGGGYGGFG +SLGGYRG+SSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG
Sbjct: 241 SGYGYGSGGDFGGGYGGFGGNSLGGYRGDSSLGYSSRFGPYSGGFGGGYGTSGLGGYGRG 300

Query: 301 VDGYGSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           VDGYGSYG SGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR
Sbjct: 301 VDGYGSYGSSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 347

[Close]
BLAST of Spg017790 vs. TAIR 10
Match: AT3G13224.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-127
Identity = 264/360 (73.33%), Postives = 289/360 (80.28%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFGKYGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQV 180
           TEDE K FF+K+G VVEHQ+IRDHETNRSRGFGF++F+ EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKKAEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFG--PGPFRTAGGIG 240
           EIKKAEPKKS N  P P+YGS+ R RS ND +  YGG YG FD G+G  PGP R+ GG  
Sbjct: 181 EIKKAEPKKSLNRSP-PSYGSHPRGRSSNDSYASYGGPYGGFDGGYGHPPGPIRSHGGPA 240

Query: 241 GRIGSGYGYGGGG---DFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGG-GYGTS 300
            R   GYGYG G    +FGGGY  +G  SLGGYR E  LGYSSRFGPY  GFGG GYG  
Sbjct: 241 SRYAGGYGYGRGSVGPEFGGGYNNYGGGSLGGYRNEPPLGYSSRFGPYGSGFGGEGYGRG 300

Query: 301 GLG---GYGR-GVDGYGSYGGSGYGGGYDS-GPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G G   GY R G +GYG YGG GYGG Y+S GPG SY GAGG YGR GYS SSRYHPYAR
Sbjct: 301 GEGAYLGYPRGGGEGYGGYGGPGYGGAYESGGPGGSYEGAGGPYGR-GYSSSSRYHPYAR 358

[Close]
BLAST of Spg017790 vs. TAIR 10
Match: AT5G40490.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 319.7 bits (818), Expect = 2.9e-87
Identity = 214/396 (54.04%), Postives = 259/396 (65.40%), Query Frame = 0 

Query: 10  PHTGDGA-SPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYA 69
           PH+G G  S GKIF+GGLA++TT  +F KHFGKYGEITDSVIMKDR TGQPRGFGF+TYA
Sbjct: 32  PHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYA 91

Query: 70  DPSVVDKVIEDTHVINGKQVEIKRTIPKGQGQSKDFKTKKIFVGGIPSTVTEDEFKHFFS 129
           D SVVDKVI+D H+I GKQVEIKRTIP+G   S DFKTKKIFVGGIPS+V +DEFK FF 
Sbjct: 92  DSSVVDKVIQDNHIIIGKQVEIKRTIPRGSMSSNDFKTKKIFVGGIPSSVDDDEFKEFFM 151

Query: 130 KHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKK- 189
           + G++ EHQI+RDH T RSRGFGF+ +E E++VD +L+KGN I++SGTQVEIKKAEPKK 
Sbjct: 152 QFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEIKKAEPKKP 211

Query: 190 SSNPPPAPAYGSNSRARSFNDGFG-GYGGSYGDFDAGFGPGPFRTAGGIGGRIGSGYGYG 249
           +S   P+  +G +SR+ +F  G+G GYGG +G    G G GP+++ GG GG    GYG G
Sbjct: 212 NSVTTPSKRFG-DSRS-NFGGGYGDGYGGGHGGGYGGPG-GPYKSGGGYGGGRSGGYG-G 271

Query: 250 GGGDFGGGYGGFGSSSLGGYRGESSLGYSSRFGPYSGG---------------------- 309
            GG+FGG  GG     +G YRGE +LGYS R+G   GG                      
Sbjct: 272 YGGEFGGYGGGGYGGGVGPYRGEPALGYSGRYGGGGGGYNRGGYSMGGGGGYGGGPGDMY 331

Query: 310 -----------------FGGGYGTSGLGGYGRGVDGYGSYG------------GSGYGGG 348
                            +GGGYG+SG+GGYG G+ G G  G            G G  GG
Sbjct: 332 GGSYGEPGGGYGGPSGSYGGGYGSSGIGGYGGGMGGAGGGGYRGGGGYDMGGVGGGGAGG 391

[Close]
BLAST of Spg017790 vs. TAIR 10
Match: AT3G13224.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 308.1 bits (788), Expect = 8.7e-84
Identity = 150/184 (81.52%), Postives = 167/184 (90.76%), Query Frame = 0 

Query: 1   MASKSKSENPHTGDGASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPR 60
           M S+S+++N  +GDGASPGKIFIGGL KDTT T FNKHFGKYGEITDSVIM+DR+TGQPR
Sbjct: 1   MGSRSRNDNFQSGDGASPGKIFIGGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPR 60

Query: 61  GFGFITYADPSVVDKVIEDTHVINGKQVEIKRTIPKGQG--QSKDFKTKKIFVGGIPSTV 120
           GFGFIT+ADPSVVDKVIEDTHVINGKQVEIKRTIPKG G  QSKD KTKKIFVGGIPSTV
Sbjct: 61  GFGFITFADPSVVDKVIEDTHVINGKQVEIKRTIPKGAGGNQSKDIKTKKIFVGGIPSTV 120

Query: 121 TEDEFKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQV 180
           TEDE K FF+K+G VVEHQ+IRDHETNRSRGFGF++F+ EEVVDE+LSKGNMIDM+ TQV
Sbjct: 121 TEDELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMADTQV 180

Query: 181 EIKK 183
            + K
Sbjct: 181 SLYK 184

[Close]
BLAST of Spg017790 vs. TAIR 10
Match: AT1G17640.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-49
Identity = 138/343 (40.23%), Postives = 194/343 (56.56%), Query Frame = 0 

Query: 16  ASPGKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDK 75
           +SPGK+F+GG++ +TT   F  +FGK+GE+ DSVIM DR TG PRGFGF+T+AD +V +K
Sbjct: 63  SSPGKLFVGGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEK 122

Query: 76  VIEDTHVINGKQVEIKRTIPKGQGQS---KDFKTKKIFVGGIPSTVTEDEFKHFFSKHGK 135
           V+E+ HVI+ ++V++KRT+P+G   +      KT+KIFVGG+P  + EDE K++F  +G 
Sbjct: 123 VLEEDHVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIFVGGLPPLLEEDELKNYFCVYGD 182

Query: 136 VVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKKAEPKKSSNPP 195
           ++EHQI+ DH T RSRGFGF+ F+ E+ VD + S G + ++   QVEIK+AEPK++    
Sbjct: 183 IIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGDKQVEIKRAEPKRTGR-- 242

Query: 196 PAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRIGSGYGYGGGGDFG 255
                         ++ F  YG S          G +       G+    Y    G    
Sbjct: 243 --------------DNSFRSYGAS----------GKYDQEDSYSGKANEDYSMYSG---Y 302

Query: 256 GGYGGFGSSSLGGYRGESSLGYSSRFGPYSGGFGGGYGTS--------GLGGYGRGVDGY 315
           GGYGG+G+     Y G S +  +  +G Y GG+G GYG          G GGY     GY
Sbjct: 303 GGYGGYGA-----YAGNSMVNPAGFYG-YGGGYGYGYGYGGQMFNMGYGAGGYSHMGSGY 362

Query: 316 GSYGGSGYGGGYDSGPGASYGGAGGLYGRGGYSGSSRYHPYAR 348
           G    + YGGG   G G +   +G   G  G SG  RYHPY +
Sbjct: 363 GVAAAAAYGGGKSHGNGNNGSSSGKGNGTNG-SGPDRYHPYQK 369

[Close]
BLAST of Spg017790 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-40
Identity = 138/395 (34.94%), Postives = 202/395 (51.14%), Query Frame = 0 

Query: 19  GKIFIGGLAKDTTYTQFNKHFGKYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIE 78
           GK+F+GG++ +T   +  +HF  YGE++ +++M+D+ TG+PRGFGF+ ++DPSV+D+V++
Sbjct: 6   GKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ 65

Query: 79  DTHVINGKQVEIKRTI----------------PKGQGQSKDFKTKKIFVGGIPSTVTEDE 138
           + H I+ ++V++KR +                 +  G     KTKKIFVGG+P T+T++E
Sbjct: 66  EKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEE 125

Query: 139 FKHFFSKHGKVVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMSGTQVEIKK 198
           F+ +F  +G V +  I+ D  TNR RGFGF+ F+ E+ VD +L K    D+SG QVE+K+
Sbjct: 126 FRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHK-TFHDLSGKQVEVKR 185

Query: 199 AEPKKSSNPPPAPAYGSNSRARSFNDGFGGYGGSYGDFDAGFGPGPFRTAGGIGGRI--- 258
           A PK ++     P  G  S     + G+ GYGG+   +D       F     +G  +   
Sbjct: 186 ALPKDAN-----PGGGGRSMGGGGSGGYQGYGGNESSYDGRMDSNRFLQHQSVGNGLPSY 245

Query: 259 -GSGYGYG-GGGDFGGGYGGFG--SSSLGGYRGESSLGYSSRFGPYSG------------ 318
             SGYG G G G  G GYG +G  + S GGY   ++ GY +   P +G            
Sbjct: 246 GSSGYGAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSSTGVAPRNS 305

Query: 319 ------------GFGGGYGTSGLG------------GYGRGVDGYGSYGG--SGYG---- 345
                       G+G G   SG G            GY     GYG Y G  SGYG    
Sbjct: 306 WDTPASSGYGNPGYGSGAAHSGYGVPGAAPPTQSPSGYSNQGYGYGGYSGSDSGYGNQAA 365

The following BLAST results are available for this feature:
BLAST of Spg017790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022941092.12.2e-18297.98heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata] >XP_02298153... [more]
XP_023525200.11.1e-18197.69heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo][more]
KAG7037314.11.6e-18096.59Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros... [more]
XP_008463022.12.7e-18096.83PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo] >KAA0048257.... [more]
XP_004149406.16.1e-18096.54heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN44390.1 hypothet... [more]
BLAST of Spg017790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8W0343.7e-3934.94Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP... [more]
P215228.3e-3139.60Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog OS=Schistocerca americ... [more]
Q8BG053.2e-3037.46Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P... [more]
Q6URK43.2e-3037.46Heterogeneous nuclear ribonucleoprotein A3 OS=Rattus norvegicus OX=10116 GN=Hnrn... [more]
P519917.1e-3037.69Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE... [more]
BLAST of Spg017790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IWT71.1e-18297.98heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1FLG01.1e-18297.98heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A5A7U1Z11.3e-18096.83Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695... [more]
A0A1S3CI791.3e-18096.83heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350126... [more]
A0A0A0K3W82.9e-18096.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278740 PE=4 SV=1[more]
BLAST of Spg017790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13224.21.7e-12773.33RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G40490.12.9e-8754.04RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT3G13224.18.7e-8481.52RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G17640.11.1e-4940.23RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT4G14300.12.7e-4034.94RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 108..181
e-value: 2.0E-19
score: 80.5
coord: 20..91
e-value: 2.4E-20
score: 83.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 21..88
e-value: 1.2E-14
score: 53.9
coord: 109..175
e-value: 5.6E-16
score: 58.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 19..95
score: 15.493864
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 107..185
score: 17.915731
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 19..97
e-value: 1.2E-23
score: 85.2
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 98..219
e-value: 2.4E-24
score: 87.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR48033:SF6RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
NoneNo IPR availablePANTHERPTHR48033RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEINcoord: 1..347
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..100
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 104..215

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spg017790.1Spg017790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010468 regulation of gene expression
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding