Spg017749 (gene) Sponge gourd (cylindrica) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCCTGCCCTCTTTATGACACGAGAGGGACTTCTGTTTGTTGGTTGGATCTCAAACAAGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATAAAGAGGTAGTCCAGGGGTAAAACGGTAATTTGACCTAGCTGGGGTACGAACACACGTGAAAGACTGACTTGCTGTTGATGGTCGATATCCATGGACACAGAAATATATCTGCAGTGAGAAGAATGCAGTTGTGGTTCTATAGTGGAGTGAACCACAGTTAATGAACATTGATTAACTTGGGCCCCGTTTGATAACCATTTGGTTTTTGGTTTTTGGTTTTTGAAAATTTGGCTTGTTTTCTTCCAATTTTCCTACCATGGTTTTCATGTTTGCCAATGACACATTTGAGTTCCTAGCCAAATTCTAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTTAGTTTTCAAAATTTGCTTGGTTTTTAAAAACAAGGAAAGAAAAGTATTAGCAAAACATAGAAACTTGTAGGTGGAAGTAGGATTTATAAGCTTAATTTTCAAAAACCAAAAACCAAAAACCAAATGGTTATCAAACGGGGCCTTGGTTAATGAGTTTAGCCAATTAATCTCATATCGTTGGAACTTTTGATCTGTAGGTCCATTAGGTCCCACTGATAGCTCACTAAGGACGTTGAGGTAAATTTCTAAGGGAGAATTGAATATTCGAAGTAGTTCGAATATTAAATTAAAATATGAATTTGATTCATATTAAAACTATATGTTATAATTAATGCACATTTGATGTACATTAATACTATAGTTTATATGAGAGAGATATAGTTAAATATATGATATTTAATTATACTATTAATTTTTTAATTAATTAATATTTTGTTTTAATTTAAATTTAATTAAATTTGATTTAATTGAATTACATTAAAACTATAGGTTATGTGGAATAATTTATATAAAATTGTTCTATATAAATGTTATCAAACTAAATGTTGATTTAATTTAATTTAATTAATTAATAATTTAATTATTTATTTATTAATTTAATTATCTATCAGTTAACTTAACTGATAGAGAATTATTCTCCCCACTAGCCTACAGTCACGCGTGAAGGAGAGGGTTTGTAAGAGAGGGGGCTTTTCCTTCCGTTGAATAACTTCCTCATTTTGATTTTTTAGAAAACCCTTACTCTCTTTCACGCATCTCTCTCTCTTTCTCAGATACTCTTGTTGATGGAGAAATTTTGACCAATCACGAATTGCCACGTCGTTACATAAAATTAATGACAAAATTAAAATTAATTAAATTTGGGGCCAATTATAAATTGACATGTGTCCCAAATTTAATTTGAAAACAAAGTTGGCCAATTATAAATTTATAGAGCCAAATTTCTATTTGATCAATTAATTAAAATTAAATTATTTTGATCAAATTAATTAATTTGACCAATTAATTAAAAATAATAATTATTTGGATCAAATTTGGGTCTTTTAAATGTTTGGGTCATATGGTTTTGGGTCAAATATGAACCAAACCCAAGACTAAATGGATGAGCCCAAGACCAATAAAGCTCAAGCCCAAGTTGTTAGGCCCAAAAGTCACCAGGGCCCATCCTGCGAGAACTCTATAAATAGAGGAGTTCTCCACCATTTCAAGGGTTCAGATTTTTGGAGCTCTCAACCAGACTTAGAGAATTCAGAGAAATTCCCCCAAAACGGAAGACTGAAGACTCTCTGAAATCTACAAGTTTCCAAGCACTGAACACTTCTTGAAGACTGAAGACTCTTTCAAACTTAGAGGACTTCATGCTCCAAGAATCCATCGAAGCTTCAGACTCGAGATCAAGCGTTCCAGCCCTTGAGTGAAACACATTCACACACAAGAGAGAGAATCAGAGGATTATGTACTAGAGATTGTATACTCACACGCATACAACATTAATACAAATCAAAGTTTATTCCACGTGTCTCATTCATTTGAATTTACGTGTGAACAAATTGGCACGCCCAGTGGGACAATTTCTACCTCTCATCTCTTTCTCTTGTTAAAAGATCCAACCAACGTGATGGCACCAAAGAAAGCTCCCGCGAAGGTTACAACATCAAGCGACTCTTACACTGGTCCTATCACTCGTAGTCGTTCCCAAGGAATTGAGATCAGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTGATCGAGGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCGCTATTCGAATCTGTCATTCCAACATCTAAGCAGTCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATATAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAACCTCTTAATGAAGGCAGTTGATGAAAGAGATCTTGAGATTGCCTATTTGAAGAACCAGCTGCAAAACCGAGAAACGGCTGAGTCTAGCCAGACCCCTGCTGCAGGAAAGAATGATAAGGGGAAGGCTGTCGTGCATGAGGACCAACCGCAACACTCTGTGTCAGTTGCCTCTTTGTCTGTCCAACAACTGCAACACATGATCATGAATTCCATCAGGGCTCAATATGGTGGACCCACTCAAAGTTCCCTCTTGTATTCTAAACCTTATACAAAGAGGATTGACAATCTCAGACTGCCCACTGGGTATCAGCCTCCCAAGTTTCAACAGTTTGATGGAAAGGGCAACCCAAAGCAGCACATCGCCCACTTTGTTGAAACCTGTGAGAACGCTGGTACTCGGGGAGATTTGCTTGTTAAGCAATTTGTCCGAACACTAAAAGGAAACGCGTTCGATTGGTACACTGACCTAGAGCCTGATACAATTGACAGCTGGGACCAGATGGAGAGAGAATTTCTGAATCGCTTCTACAGTACGAGGCGGACAGTTAGTATGACGGAACTCACGAGCACAAATGATAGCGAGCATAGCTAGCTACTTTTACTTATTTAATTTAGCTAGTCTTTTATGATTTTTGGGCCATTTTATTGTGCTTTATTGTTTATTTTGTAGGAAATGGTTGATTGGAGCTATAGCGCAATATTGGAGTTAATCGGGTGCTCGGGACGTGAAAAGATGCAAAGAAATGAAAAAGAATCAAAGAGAACAAAGTCAACATTCGGTCAACATTTGACCAGCGTCGAGACGCCATCCCTTGAGCGTCTCGACGCTGGCATTCCATATCAGAATAGGCGCAAAAAGGTCACAGCGTCGAGACGCTGCGACCTTAGCGTCTCGACGCTGCGTAATTTCCTTTCCAGAATACGCGTGTTTAGAGGCAGCGTCGAGACGCTGTCTTGA ATGGGCCCTGCCCTCTTTATGACACGAGAGGGACTTCTGTTTGTTGGTTGGATCTCAAACAAGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATAAAGAGGTAGTCCAGGGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTGATCGAGGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCGCTATTCGAATCTGTCATTCCAACATCTAAGCAGTCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATATAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAACCTCTTAATGAAGGCAGAAATGGTTGATTGGAGCTATAGCGCAATATTGGAGTTAATCGGGTGCTCGGGACGTGAAAAGATGCAAAGAAATGAAAAAGAATCAAAGAGAACAAAGTCAACATTCGGTCAACATTTGACCAGCGTCGAGACGCCATCCCTTGAGCGTCTCGACGCTGGCATTCCATATCAGAATAGGCGCAAAAAGGTCACAGCGTCGAGACGCTGCGACCTTAGCGTCTCGACGCTGCGTAATTTCCTTTCCAGAATACGCGTGTTTAGAGGCAGCGTCGAGACGCTGTCTTGA ATGGGCCCTGCCCTCTTTATGACACGAGAGGGACTTCTGTTTGTTGGTTGGATCTCAAACAAGTTGTTCATTAGAGGAGCACTGGTACTTAAGGATAAAGAGGTAGTCCAGGGGGAGGATCATACTCCTCTTGCTGTTGCAAGCAGGATCTCAAAGCTGATCGAGGAATCCTCTAAGGATAGGGTTGCAGTCAAAGACAACCCGCTATTCGAATCTGTCATTCCAACATCTAAGCAGTCAAAGGATACACTAAATCCTGATGTGATGTCCGTCATGATGGCTGATATAGACCAAGATGAAAGAATGGCAGAGATGGAAAGAAAACTCAACCTCTTAATGAAGGCAGAAATGGTTGATTGGAGCTATAGCGCAATATTGGAGTTAATCGGGTGCTCGGGACGTGAAAAGATGCAAAGAAATGAAAAAGAATCAAAGAGAACAAAGTCAACATTCGGTCAACATTTGACCAGCGTCGAGACGCCATCCCTTGAGCGTCTCGACGCTGGCATTCCATATCAGAATAGGCGCAAAAAGGTCACAGCGTCGAGACGCTGCGACCTTAGCGTCTCGACGCTGCGTAATTTCCTTTCCAGAATACGCGTGTTTAGAGGCAGCGTCGAGACGCTGTCTTGA MGPALFMTREGLLFVGWISNKLFIRGALVLKDKEVVQGEDHTPLAVASRISKLIEESSKDRVAVKDNPLFESVIPTSKQSKDTLNPDVMSVMMADIDQDERMAEMERKLNLLMKAEMVDWSYSAILELIGCSGREKMQRNEKESKRTKSTFGQHLTSVETPSLERLDAGIPYQNRRKKVTASRRCDLSVSTLRNFLSRIRVFRGSVETLS Homology
BLAST of Spg017749 vs. NCBI nr
Match: KAA0065961.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK30268.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 72.0 bits (175), Expect = 6.8e-09 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Spg017749 vs. NCBI nr
Match: XP_031742199.1 (uncharacterized protein LOC105435721 [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 2.6e-08 Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Spg017749 vs. NCBI nr
Match: XP_031735972.1 (uncharacterized protein LOC116401693 [Cucumis sativus]) HSP 1 Score: 70.1 bits (170), Expect = 2.6e-08 Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of Spg017749 vs. NCBI nr
Match: XP_031739134.1 (uncharacterized protein LOC116402863 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-08 Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = 0
BLAST of Spg017749 vs. NCBI nr
Match: XP_031742032.1 (uncharacterized protein LOC116404025 [Cucumis sativus]) HSP 1 Score: 69.7 bits (169), Expect = 3.4e-08 Identity = 58/172 (33.72%), Postives = 88/172 (51.16%), Query Frame = 0
BLAST of Spg017749 vs. ExPASy TrEMBL
Match: A0A5A7VJT9 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00220 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 3.3e-09 Identity = 40/99 (40.40%), Postives = 62/99 (62.63%), Query Frame = 0
BLAST of Spg017749 vs. ExPASy TrEMBL
Match: A0A5D3BY54 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001700 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 2.8e-08 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 0
BLAST of Spg017749 vs. ExPASy TrEMBL
Match: A0A5A7U5D6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00180 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.8e-08 Identity = 41/97 (42.27%), Postives = 58/97 (59.79%), Query Frame = 0
BLAST of Spg017749 vs. ExPASy TrEMBL
Match: A0A5A7UG56 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G00780 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 8.1e-08 Identity = 54/169 (31.95%), Postives = 87/169 (51.48%), Query Frame = 0
BLAST of Spg017749 vs. ExPASy TrEMBL
Match: A0A5A7UF60 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00260 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07 Identity = 61/183 (33.33%), Postives = 95/183 (51.91%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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