Spg017649 (gene) Sponge gourd (cylindrica) v1

Overview


Name	Spg017649
Type	gene
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pre-rRNA-processing protein TSR1 homolog
Location	scaffold9: 33085067 .. 33086227 (-)
RNA-Seq Expression	Spg017649
Synteny	Spg017649

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTTTCTGTTTTAAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAGTATGTTATCACGTTATTTCCTTTTTGAGACTTCTAATCTAAAAGGAGAAGAATTTTTGTGTGTATAGTTAAAACTACTTTTCTTTTCTAGTACGACCTACCCACTCATATAAAGAAAAGAAACGATTATAAAAAAAATGTGTATTTCTAGCATTACTTCTGAATTTCCCGAAGATTGCAAGTTTTATCCTGCAGATACTAAAGATGAGTTACACAAGGTAAGCAAGTGTAGGTTGTTTGTATAGGTTACTCATTTACATGCCTTTTTATGCTTATTTTCAGTTTTCATGATTTATATTTGCAGTTTATGTGGCTTTTTAAGGAGCAAAGGCTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAAAAGGTTCTTAAATATATGTTTTTTGATACATTTCATAGATTTTGACCACTATTTTCCTCTTACTCTGTAAGGTAGGTCTGTTTTTTAGATATTATTTTGCTAATTCTATGGTTTTCCCTTAGGTTGATATGGTAGCTGATAATTATACTCCAGGAAAGTGTACCCTTCTTCTCACTGGTTATCTACATGCTCGAAGTCTCTCTGTGAATAAGCTGGTAGAGTCCTCTGTTTTTCCATGTTTCTTGCTTCAGGTAGGTTGATATGCTGTCCATACTTGCCTTTTCTTTCACCAGGTTCATGTCGCTGGTTTTAGCAAGCAAAAATACTAACATTTTATCCCTTAATTTAAGTTATTTTGTTGGATTAATCGGTGGTTTAATGTCTAAATTTGTTAATTTCAGATTTTTTAGTCCCTCAAGAGCAAATGTGTTGAGGTTTGCATATTAATCTGTTAATGCTCTTCCCATGAATTACATGTTGTAATTTAATAGTTCTTGTCAGCATCTCATGCGTTTGCCTTTGCTTTTGTCAAAACACATAGGAAGCTTGGGAAATAGGTGAGACAGATGATGAGGATTCTGATATTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGATGACCTTAATAATCCTGGCGTCAGTGATGATGATCAAGCTTCTTTTGAGTTAATACATTCTGATCAGAGACAGATATGGATTCTATGA

mRNA sequence

ATGCCTTTCTGTTTTAAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAATACTAAAGATGAGTTACACAAGTTTATGTGGCTTTTTAAGGAGCAAAGGCTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAAAAGGTTGATATGGTAGCTGATAATTATACTCCAGGAAAGTGTACCCTTCTTCTCACTGGTTATCTACATGCTCGAAGTCTCTCTGTGAATAAGCTGGTAGAGTCCTCTGTTTTTCCATGTTTCTTGCTTCAGGAAGCTTGGGAAATAGGTGAGACAGATGATGAGGATTCTGATATTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGATGACCTTAATAATCCTGGCGTCAGTGATGATGATCAAGCTTCTTTTGAGTTAATACATTCTGATCAGAGACAGATATGGATTCTATGA

Coding sequence (CDS)

ATGCCTTTCTGTTTTAAGATCTCTGGGCTTACCGAGTACTGCAGTGCTTATTCGAATACTAAAGATGAGTTACACAAGTTTATGTGGCTTTTTAAGGAGCAAAGGCTCACTGTTCCTCATTGGAGAAATCAAAGGCCTTATTTGATGTCTCAAAAGGTTGATATGGTAGCTGATAATTATACTCCAGGAAAGTGTACCCTTCTTCTCACTGGTTATCTACATGCTCGAAGTCTCTCTGTGAATAAGCTGGTAGAGTCCTCTGTTTTTCCATGTTTCTTGCTTCAGGAAGCTTGGGAAATAGGTGAGACAGATGATGAGGATTCTGATATTGACAATGAATCTGATGGTATGATGTTAGACAGTGGTTATACAAATGAAGTGGATGACCTTAATAATCCTGGCGTCAGTGATGATGATCAAGCTTCTTTTGAGTTAATACATTCTGATCAGAGACAGATATGGATTCTATGA

Protein sequence

MPFCFKISGLTEYCSAYSNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCTLLLTGYLHARSLSVNKLVESSVFPCFLLQEAWEIGETDDEDSDIDNESDGMMLDSGYTNEVDDLNNPGVSDDDQASFELIHSDQRQIWIL

Homology

[Close]

BLAST of Spg017649 vs. NCBI nr
Match: XP_023547507.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023547508.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-47
Identity = 119/229 (51.97%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN TPGKCT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEILKDPVPLNPRIEQDSMDTQDEEVVRLL 326

Query: 128 -----------------------------------------------------QEAWEIG 151
                                                                QEAWEIG
Sbjct: 327 EPSEQEPLVVENELDPLSGEQTWPTEADRAEADRSQKEKHLRKRALAHGTSDYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. NCBI nr
Match: KAG7014590.1 (Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 198.0 bits (502), Expect = 6.1e-47
Identity = 117/229 (51.09%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN  PGKCT
Sbjct: 233 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCIPGKCT 292

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 293 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRIEQDSIDTQDEEVVRLL 352

Query: 128 -----------------------------------------------------QEAWEIG 151
                                                                QEAWEIG
Sbjct: 353 EPSEQEPLVVENELDPLSGEQTWPTEADRAEADRSQKEKHLRKRELAHGTSDYQEAWEIG 412

[Close]

BLAST of Spg017649 vs. NCBI nr
Match: XP_038875506.1 (pre-rRNA-processing protein TSR1 homolog [Benincasa hispida])

HSP 1 Score: 196.1 bits (497), Expect = 2.3e-46
Identity = 117/229 (51.09%), Postives = 125/229 (54.59%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN T GKCT
Sbjct: 207 SEFPEDCKYYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRVEQDAMDTQDEEVVRLL 326

Query: 128 -----------------------------------------------------QEAWEIG 151
                                                                QEAWEIG
Sbjct: 327 EPSEQEPLVVENEPDPLSGEQTWPTEADRAEADKNQKEKHLRKRALALGTSEYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. NCBI nr
Match: KAG6576073.1 (Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 195.7 bits (496), Expect = 3.0e-46
Identity = 115/229 (50.22%), Postives = 127/229 (55.46%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFK+QRLTVPHWRNQRPYLMSQKVDMVADN  PGKCT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKQQRLTVPHWRNQRPYLMSQKVDMVADNCIPGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRIEQDSIDTQDEEVVRLL 326

Query: 128 -----------------------------------------------------QEAWEIG 151
                                                                QEAWEIG
Sbjct: 327 EPSEQEPLVVENELDPLSGEQTWPTEADRAEADRSQKEKHLRKRELAHGTSDYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. NCBI nr
Match: XP_023513549.1 (pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513550.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513551.1 pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 194.5 bits (493), Expect = 6.8e-46
Identity = 117/228 (51.32%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN T GKCT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRMEQDAMDTHDVEVIQLL 326

Query: 128 -----------------------------------------------------QEAWEIG 150
                                                                QEAWEIG
Sbjct: 327 EPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. ExPASy TrEMBL
Match: A0A6J1L0W3 (pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498098 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 3.3e-46
Identity = 117/228 (51.32%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN T GKCT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRMEQDAMDTHDVEVVQLL 326

Query: 128 -----------------------------------------------------QEAWEIG 150
                                                                QEAWEIG
Sbjct: 327 EPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQREKHLRKRALAHGTSEYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. ExPASy TrEMBL
Match: A0A6J1H8A7 (pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461047 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.6e-45
Identity = 116/228 (50.88%), Postives = 124/228 (54.39%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN T GKCT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTSGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCRIEVLKDPVPLNPRTEQDAMDTHDVEVVQLL 326

Query: 128 -----------------------------------------------------QEAWEIG 150
                                                                QEAWEIG
Sbjct: 327 EPSEQEPLVVENDPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. ExPASy TrEMBL
Match: A0A6J1GPU5 (LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456021 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.7e-45
Identity = 116/226 (51.33%), Postives = 126/226 (55.75%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADN TPGKCT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNCTPGKCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLCKIEVLKDPVPLNPRIEQDSMDTQDEEVVRLL 326

Query: 128 -------------------------------------------------QEAWEIGETDD 151
                                                            QEAWEIG TDD
Sbjct: 327 EPSEQEPLVVENELDPLTWPTEADRAEADRSQKEKHLKKKALAHGTSDYQEAWEIGGTDD 386

[Close]

BLAST of Spg017649 vs. ExPASy TrEMBL
Match: A0A6J1JU15 (LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488360 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 4.0e-44
Identity = 113/228 (49.56%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TK+ELHKFMWLFKEQRLTVPHW NQRPYLMSQKVDMVADN TPGKCT
Sbjct: 201 SEFPEDCKFYPADTKNELHKFMWLFKEQRLTVPHWINQRPYLMSQKVDMVADNCTPGKCT 260

Query: 68  LLLTGYLHARSLSVNKLVESSVFPC----FLL---------------------------- 127
           LLLTGYL A+SLSVN+L+ SSV       F L                            
Sbjct: 261 LLLTGYLRAQSLSVNQLLHSSVHVAGAGDFXLCKIEVLKDPVPLNPRIEQDSMDTQDEEV 320

Query: 128 ----------------------------------------------------QEAWEIGE 151
                                                               QEAWEIG+
Sbjct: 321 VRLLEPSELEPLVVENELDPLSGEQTWPTEADRGQKEKHLRKRALAHGTSDYQEAWEIGD 380

[Close]

BLAST of Spg017649 vs. ExPASy TrEMBL
Match: A0A5A7T9F0 (Pre-rRNA-processing protein TSR1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001780 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-42
Identity = 109/229 (47.60%), Postives = 122/229 (53.28%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++TKDELHKFMWLFKEQRLTVPHWR QRPYLMSQKVDMVADN TPG+CT
Sbjct: 207 SEFPEDCKFYPADTKDELHKFMWLFKEQRLTVPHWRTQRPYLMSQKVDMVADNCTPGRCT 266

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCFLL-------------------------------- 127
           LLLTGYL ARSLSVN+LV  +    F L                                
Sbjct: 267 LLLTGYLRARSLSVNQLVHVAGAGDFQLSKIEVLKDPVPLNPRTEQDAMDTQDDEIIRLL 326

Query: 128 -----------------------------------------------------QEAWEIG 151
                                                                QEAWEIG
Sbjct: 327 EPSEHEPLVVENEPDPLSGEQTWPTEADRAEADRNQKEKHLRKRALAHGTSEYQEAWEIG 386

[Close]

BLAST of Spg017649 vs. TAIR 10
Match: AT1G42440.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AARP2CN (InterPro:IPR012948), Protein of unknown function DUF663 (InterPro:IPR007034); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G06720.1); Has 2741 Blast hits to 2088 proteins in 291 species: Archae - 2; Bacteria - 131; Metazoa - 833; Fungi - 650; Plants - 171; Viruses - 49; Other Eukaryotes - 905 (source: NCBI BLink). )

HSP 1 Score: 107.5 bits (267), Expect = 1.0e-23
Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 8   SGLTEYCSAY-SNTKDELHKFMWLFKEQRLTVPHWRNQRPYLMSQKVDMVADNYTPGKCT 67
           S   E C  Y ++T+DELHKFMWLFK QRLTVPHWR+QR Y++++K  M+ D+ + GKCT
Sbjct: 212 SEFPEDCKFYPADTRDELHKFMWLFKAQRLTVPHWRSQRSYIVARKAGMLVDDESSGKCT 271

Query: 68  LLLTGYLHARSLSVNKLVESSVFPCF------LLQEAWEIGETDDEDS-DIDNESDGMML 122
           LLL+GYL AR LSVN+LV  S    F      +L++ + + E  +++S ++D+  D  +L
Sbjct: 272 LLLSGYLRARKLSVNQLVHVSGVGDFQFSKIEVLKDPFPLNERKNQNSMELDDSHDEEVL 331

The following BLAST results are available for this feature:

BLAST of Spg017649 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547507.1	1.2e-47	51.97	pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023547...	[more]
KAG7014590.1	6.1e-47	51.09	Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma s...	[more]
XP_038875506.1	2.3e-46	51.09	pre-rRNA-processing protein TSR1 homolog [Benincasa hispida]	[more]
KAG6576073.1	3.0e-46	50.22	Pre-rRNA-processing protein TSR1-like protein, partial [Cucurbita argyrosperma s...	[more]
XP_023513549.1	6.8e-46	51.32	pre-rRNA-processing protein TSR1 homolog [Cucurbita pepo subsp. pepo] >XP_023513...	[more]

BLAST of Spg017649 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Spg017649 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L0W3	3.3e-46	51.32	pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1H8A7	1.6e-45	50.88	pre-rRNA-processing protein TSR1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1GPU5	4.7e-45	51.33	LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita mosch...	[more]
A0A6J1JU15	4.0e-44	49.56	LOW QUALITY PROTEIN: pre-rRNA-processing protein TSR1 homolog OS=Cucurbita maxim...	[more]
A0A5A7T9F0	1.7e-42	47.60	Pre-rRNA-processing protein TSR1-like protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Spg017649 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G42440.1	1.0e-23	47.54	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ribosome biogenesis; LOCA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (cylindrica) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012948	AARP2CN	SMART	SM00785	aarp2cn2	coord: 23..91 e-value: 1.9E-4 score: 19.0
IPR012948	AARP2CN	PFAM	PF08142	AARP2CN	coord: 23..84 e-value: 2.4E-9 score: 37.2
None	No IPR available	PANTHER	PTHR12858:SF3	BNAA05G35890D PROTEIN	coord: 18..89
IPR039761	Ribosome biogenesis protein Bms1/Tsr1	PANTHER	PTHR12858	RIBOSOME BIOGENESIS PROTEIN	coord: 18..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spg017649.1	Spg017649.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005634	nucleus